view CMakeLists.txt @ 28:b440931aff64 default tip

added CITATION.cff
author Sebastien Jodogne <s.jodogne@gmail.com>
date Sat, 06 Apr 2024 17:25:43 +0200
parents 2a987de857d6
children
line wrap: on
line source

# Neuroimaging plugin for Orthanc
# Copyright (C) 2021-2024 Sebastien Jodogne, ICTEAM UCLouvain, Belgium
#
# This program is free software: you can redistribute it and/or
# modify it under the terms of the GNU General Public License as
# published by the Free Software Foundation, either version 3 of the
# License, or (at your option) any later version.
# 
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
# General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <http://www.gnu.org/licenses/>.


cmake_minimum_required(VERSION 2.8)

project(OrthancNeuro)

set(ORTHANC_PLUGIN_VERSION "mainline")

if (ORTHANC_PLUGIN_VERSION STREQUAL "mainline")
  set(ORTHANC_FRAMEWORK_DEFAULT_VERSION "mainline")
  set(ORTHANC_FRAMEWORK_DEFAULT_SOURCE "hg")
else()
  set(ORTHANC_FRAMEWORK_DEFAULT_VERSION "1.12.3")
  set(ORTHANC_FRAMEWORK_DEFAULT_SOURCE "web")
endif()


# Parameters of the build
set(STATIC_BUILD OFF CACHE BOOL "Static build of the third-party libraries (necessary for Windows)")
set(ALLOW_DOWNLOADS OFF CACHE BOOL "Allow CMake to download packages")
set(ORTHANC_FRAMEWORK_SOURCE "${ORTHANC_FRAMEWORK_DEFAULT_SOURCE}" CACHE STRING "Source of the Orthanc framework (can be \"system\", \"hg\", \"archive\", \"web\" or \"path\")")
set(ORTHANC_FRAMEWORK_VERSION "${ORTHANC_FRAMEWORK_DEFAULT_VERSION}" CACHE STRING "Version of the Orthanc framework")
set(ORTHANC_FRAMEWORK_ARCHIVE "" CACHE STRING "Path to the Orthanc archive, if ORTHANC_FRAMEWORK_SOURCE is \"archive\"")
set(ORTHANC_FRAMEWORK_ROOT "" CACHE STRING "Path to the Orthanc source directory, if ORTHANC_FRAMEWORK_SOURCE is \"path\"")

set(USE_SYSTEM_NIFTILIB ON CACHE BOOL "Use the system version of niftilib")


# Advanced parameters to fine-tune linking against system libraries
set(USE_SYSTEM_ORTHANC_SDK ON CACHE BOOL "Use the system version of the Orthanc plugin SDK")
set(ORTHANC_FRAMEWORK_STATIC OFF CACHE BOOL "If linking against the Orthanc framework system library, indicates whether this library was statically linked")
mark_as_advanced(ORTHANC_FRAMEWORK_STATIC)


# Download and setup the Orthanc framework
include(${CMAKE_SOURCE_DIR}/Resources/Orthanc/CMake/DownloadOrthancFramework.cmake)

if (ORTHANC_FRAMEWORK_SOURCE STREQUAL "system")
  if (ORTHANC_FRAMEWORK_USE_SHARED)
    include(FindBoost)
    find_package(Boost COMPONENTS filesystem thread)
    
    if (NOT Boost_FOUND)
      message(FATAL_ERROR "Unable to locate Boost on this system")
    endif()
    
    include(FindDCMTK)
    link_libraries(${Boost_LIBRARIES} ${DCMTK_LIBRARIES} jsoncpp)
  endif()

  link_libraries(${ORTHANC_FRAMEWORK_LIBRARIES})
  
  set(USE_SYSTEM_GOOGLE_TEST ON CACHE BOOL "Use the system version of Google Test")
  set(USE_GOOGLE_TEST_DEBIAN_PACKAGE OFF CACHE BOOL "Use the sources of Google Test shipped with libgtest-dev (Debian only)")
  mark_as_advanced(USE_GOOGLE_TEST_DEBIAN_PACKAGE)
  include(${CMAKE_SOURCE_DIR}/Resources/Orthanc/CMake/GoogleTestConfiguration.cmake)

else()
  include(${ORTHANC_FRAMEWORK_ROOT}/../Resources/CMake/OrthancFrameworkParameters.cmake)
  
  set(ENABLE_GOOGLE_TEST ON)
  set(ENABLE_ZLIB ON)

  if (OFF)
    # Enable DCMTK for testing on raw DICOM files
    set(ENABLE_DCMTK ON)
    set(ENABLE_PNG ON)
    set(ENABLE_LOCALE ON)
  else()
    set(ENABLE_DCMTK OFF)
    set(ENABLE_PNG OFF)
    set(ENABLE_LOCALE OFF)
  endif()
   
  set(ENABLE_MODULE_JOBS OFF CACHE INTERNAL "")

  include(${ORTHANC_FRAMEWORK_ROOT}/../Resources/CMake/OrthancFrameworkConfiguration.cmake)
  include_directories(${ORTHANC_FRAMEWORK_ROOT})
endif()


include(${CMAKE_SOURCE_DIR}/Resources/CMake/NiftiCLib.cmake)
include(${CMAKE_SOURCE_DIR}/Resources/Orthanc/Plugins/OrthancPluginsExports.cmake)


# Check that the Orthanc SDK headers are available
if (STATIC_BUILD OR NOT USE_SYSTEM_ORTHANC_SDK)
  include_directories(${CMAKE_SOURCE_DIR}/Resources/Orthanc/Sdk-1.10.1)
else ()
  CHECK_INCLUDE_FILE_CXX(orthanc/OrthancCPlugin.h HAVE_ORTHANC_H)
  if (NOT HAVE_ORTHANC_H)
    message(FATAL_ERROR "Please install the headers of the Orthanc plugins SDK")
  endif()
endif()


add_definitions(
  -DHAS_ORTHANC_EXCEPTION=1
  -DORTHANC_PLUGIN_VERSION="${ORTHANC_PLUGIN_VERSION}"
  )

EmbedResources(
  ORTHANC_EXPLORER  ${CMAKE_SOURCE_DIR}/Sources/Plugin/OrthancExplorer.js
  )

if (${CMAKE_SYSTEM_NAME} STREQUAL "Linux" OR
    ${CMAKE_SYSTEM_NAME} STREQUAL "kFreeBSD" OR
    ${CMAKE_SYSTEM_NAME} STREQUAL "FreeBSD")
  link_libraries(rt)
elseif (${CMAKE_SYSTEM_NAME} STREQUAL "Windows")
  execute_process(
    COMMAND 
    ${PYTHON_EXECUTABLE} ${ORTHANC_FRAMEWORK_ROOT}/../Resources/WindowsResources.py
    ${ORTHANC_PLUGIN_VERSION} "Neuroimaging plugin" OrthancNeuro.dll "Neuroimaging plugin for Orthanc"
    ERROR_VARIABLE Failure
    OUTPUT_FILE ${AUTOGENERATED_DIR}/Version.rc
    )

  if (Failure)
    message(FATAL_ERROR "Error while computing the version information: ${Failure}")
  endif()

  list(APPEND AUTOGENERATED_SOURCES  ${AUTOGENERATED_DIR}/Version.rc)
endif()


set(NEURO_SOURCES
  Sources/Framework/BufferReader.cpp
  Sources/Framework/CSAHeader.cpp
  Sources/Framework/CSATag.cpp
  Sources/Framework/DicomInstancesCollection.cpp
  Sources/Framework/IDicomFrameDecoder.cpp
  Sources/Framework/InputDicomInstance.cpp
  Sources/Framework/NeuroToolbox.cpp
  Sources/Framework/NiftiWriter.cpp
  Sources/Framework/Slice.cpp
  
  ${NIFTILIB_SOURCES}
  ${AUTOGENERATED_SOURCES}
  ${ORTHANC_CORE_SOURCES}
  )

if (ENABLE_DCMTK)
  link_libraries(${DCMTK_LIBRARIES})
  list(APPEND NEURO_SOURCES ${ORTHANC_DICOM_SOURCES})
endif()


add_custom_target(
  AutogeneratedTarget
  DEPENDS 
  ${AUTOGENERATED_SOURCES}
  )
          
add_library(OrthancNeuro SHARED
  Sources/Plugin/Plugin.cpp
  Sources/Plugin/PluginFrameDecoder.cpp

  ${NEURO_SOURCES}
  ${CMAKE_SOURCE_DIR}/Resources/Orthanc/Plugins/OrthancPluginCppWrapper.cpp
  )

add_dependencies(OrthancNeuro AutogeneratedTarget)

add_executable(UnitTests
  Sources/UnitTestsSources/NiftiTests.cpp
  Sources/UnitTestsSources/UnitTestsMain.cpp

  ${NEURO_SOURCES}
  ${GOOGLE_TEST_SOURCES}
  )

add_dependencies(UnitTests AutogeneratedTarget)

target_link_libraries(UnitTests ${GOOGLE_TEST_LIBRARIES})


message("Setting the version of the library to ${ORTHANC_PLUGIN_VERSION}")

set_target_properties(OrthancNeuro PROPERTIES 
  VERSION ${ORTHANC_PLUGIN_VERSION} 
  SOVERSION ${ORTHANC_PLUGIN_VERSION})

install(
  TARGETS OrthancNeuro
  RUNTIME DESTINATION lib    # Destination for Windows
  LIBRARY DESTINATION share/orthanc/plugins    # Destination for Linux
  )

if (COMMAND DefineSourceBasenameForTarget)
  DefineSourceBasenameForTarget(OrthancNeuro)
  DefineSourceBasenameForTarget(UnitTests)
endif()