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annotate Framework/Plugins/IndexBackend.h @ 226:a4918d57435c

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DatabaseManager doesn't IDatabaseFactory anymore
author Sebastien Jodogne <s.jodogne@gmail.com>
date Fri, 02 Apr 2021 19:23:36 +0200
parents 94c9908e6aca
children 4e15eace9b90
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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3236894320d6 upgrade to year 2021
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5 * Copyright (C) 2017-2021 Osimis S.A., Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU Affero General Public License
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9 * as published by the Free Software Foundation, either version 3 of
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10 * the License, or (at your option) any later version.
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11 *
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12 * This program is distributed in the hope that it will be useful, but
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13 * WITHOUT ANY WARRANTY; without even the implied warranty of
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14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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15 * Affero General Public License for more details.
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16 *
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17 * You should have received a copy of the GNU Affero General Public License
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18 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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19 **/
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20
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21
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22 #pragma once
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24 #include "IDatabaseBackend.h"
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26 #include <OrthancException.h>
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29 namespace OrthancDatabases
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30 {
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31 class IndexBackend : public IDatabaseBackend
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32 {
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33 private:
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34 class LookupFormatter;
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35
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36 OrthancPluginContext* context_;
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37
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38 std::unique_ptr<IDatabaseBackendOutput::IFactory> outputFactory_;
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39
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40 protected:
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41 static int64_t ReadInteger64(const DatabaseManager::StatementBase& statement,
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42 size_t field);
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44 static int32_t ReadInteger32(const DatabaseManager::StatementBase& statement,
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45 size_t field);
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46
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47 static std::string ReadString(const DatabaseManager::StatementBase& statement,
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48 size_t field);
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49
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50 template <typename T>
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51 static void ReadListOfIntegers(std::list<T>& target,
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52 DatabaseManager::CachedStatement& statement,
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53 const Dictionary& args);
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54
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55 static void ReadListOfStrings(std::list<std::string>& target,
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56 DatabaseManager::CachedStatement& statement,
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57 const Dictionary& args);
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58
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59 void ClearDeletedFiles(DatabaseManager& manager);
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61 void ClearDeletedResources(DatabaseManager& manager);
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63 void SignalDeletedFiles(IDatabaseBackendOutput& output,
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64 DatabaseManager& manager);
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66 void SignalDeletedResources(IDatabaseBackendOutput& output,
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67 DatabaseManager& manager);
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69 private:
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70 void ReadChangesInternal(IDatabaseBackendOutput& output,
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71 bool& done,
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72 DatabaseManager& manager,
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73 DatabaseManager::CachedStatement& statement,
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74 const Dictionary& args,
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75 uint32_t maxResults);
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76
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77 void ReadExportedResourcesInternal(IDatabaseBackendOutput& output,
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78 bool& done,
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79 DatabaseManager::CachedStatement& statement,
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80 const Dictionary& args,
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81 uint32_t maxResults);
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82
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83 public:
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84 IndexBackend(OrthancPluginContext* context);
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85
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86 virtual OrthancPluginContext* GetContext() ORTHANC_OVERRIDE
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87 {
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88 return context_;
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89 }
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91 virtual void SetOutputFactory(IDatabaseBackendOutput::IFactory* factory) ORTHANC_OVERRIDE;
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93 virtual IDatabaseBackendOutput* CreateOutput() ORTHANC_OVERRIDE;
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95 virtual void AddAttachment(DatabaseManager& manager,
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96 int64_t id,
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97 const OrthancPluginAttachment& attachment) ORTHANC_OVERRIDE;
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98
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99 virtual void AttachChild(DatabaseManager& manager,
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100 int64_t parent,
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101 int64_t child) ORTHANC_OVERRIDE;
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102
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103 virtual void ClearChanges(DatabaseManager& manager) ORTHANC_OVERRIDE;
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105 virtual void ClearExportedResources(DatabaseManager& manager) ORTHANC_OVERRIDE;
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107 virtual void DeleteAttachment(IDatabaseBackendOutput& output,
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108 DatabaseManager& manager,
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109 int64_t id,
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110 int32_t attachment) ORTHANC_OVERRIDE;
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111
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112 virtual void DeleteMetadata(DatabaseManager& manager,
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113 int64_t id,
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114 int32_t metadataType) ORTHANC_OVERRIDE;
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115
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116 virtual void DeleteResource(IDatabaseBackendOutput& output,
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117 DatabaseManager& manager,
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118 int64_t id) ORTHANC_OVERRIDE;
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119
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120 virtual void GetAllInternalIds(std::list<int64_t>& target,
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121 DatabaseManager& manager,
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122 OrthancPluginResourceType resourceType) ORTHANC_OVERRIDE;
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123
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124 virtual void GetAllPublicIds(std::list<std::string>& target,
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125 DatabaseManager& manager,
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126 OrthancPluginResourceType resourceType) ORTHANC_OVERRIDE;
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127
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128 virtual void GetAllPublicIds(std::list<std::string>& target,
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129 DatabaseManager& manager,
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130 OrthancPluginResourceType resourceType,
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131 uint64_t since,
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132 uint64_t limit) ORTHANC_OVERRIDE;
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133
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134 virtual void GetChanges(IDatabaseBackendOutput& output,
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135 bool& done /*out*/,
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136 DatabaseManager& manager,
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137 int64_t since,
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138 uint32_t maxResults) ORTHANC_OVERRIDE;
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139
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140 virtual void GetChildrenInternalId(std::list<int64_t>& target /*out*/,
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141 DatabaseManager& manager,
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142 int64_t id) ORTHANC_OVERRIDE;
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143
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144 virtual void GetChildrenPublicId(std::list<std::string>& target /*out*/,
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145 DatabaseManager& manager,
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146 int64_t id) ORTHANC_OVERRIDE;
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147
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148 virtual void GetExportedResources(IDatabaseBackendOutput& output,
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149 bool& done /*out*/,
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150 DatabaseManager& manager,
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151 int64_t since,
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152 uint32_t maxResults) ORTHANC_OVERRIDE;
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153
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154 virtual void GetLastChange(IDatabaseBackendOutput& output,
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155 DatabaseManager& manager) ORTHANC_OVERRIDE;
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156
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157 virtual void GetLastExportedResource(IDatabaseBackendOutput& output,
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158 DatabaseManager& manager) ORTHANC_OVERRIDE;
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159
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160 virtual void GetMainDicomTags(IDatabaseBackendOutput& output,
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161 DatabaseManager& manager,
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162 int64_t id) ORTHANC_OVERRIDE;
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163
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164 virtual std::string GetPublicId(DatabaseManager& manager,
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165 int64_t resourceId) ORTHANC_OVERRIDE;
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166
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167 virtual uint64_t GetResourcesCount(DatabaseManager& manager,
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168 OrthancPluginResourceType resourceType) ORTHANC_OVERRIDE;
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169
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170 virtual OrthancPluginResourceType GetResourceType(DatabaseManager& manager,
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171 int64_t resourceId) ORTHANC_OVERRIDE;
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172
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173 virtual uint64_t GetTotalCompressedSize(DatabaseManager& manager) ORTHANC_OVERRIDE;
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174
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175 virtual uint64_t GetTotalUncompressedSize(DatabaseManager& manager) ORTHANC_OVERRIDE;
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176
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177 virtual bool IsExistingResource(DatabaseManager& manager,
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178 int64_t internalId) ORTHANC_OVERRIDE;
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179
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180 virtual bool IsProtectedPatient(DatabaseManager& manager,
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181 int64_t internalId) ORTHANC_OVERRIDE;
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182
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183 virtual void ListAvailableMetadata(std::list<int32_t>& target /*out*/,
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184 DatabaseManager& manager,
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185 int64_t id) ORTHANC_OVERRIDE;
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186
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187 virtual void ListAvailableAttachments(std::list<int32_t>& target /*out*/,
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188 DatabaseManager& manager,
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189 int64_t id) ORTHANC_OVERRIDE;
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190
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191 virtual void LogChange(DatabaseManager& manager,
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192 int32_t changeType,
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193 int64_t resourceId,
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194 OrthancPluginResourceType resourceType,
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195 const char* date) ORTHANC_OVERRIDE;
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196
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197 virtual void LogExportedResource(DatabaseManager& manager,
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198 const OrthancPluginExportedResource& resource) ORTHANC_OVERRIDE;
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199
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200 virtual bool LookupAttachment(IDatabaseBackendOutput& output,
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201 DatabaseManager& manager,
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202 int64_t id,
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203 int32_t contentType) ORTHANC_OVERRIDE;
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204
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205 virtual bool LookupGlobalProperty(std::string& target /*out*/,
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206 DatabaseManager& manager,
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207 const char* serverIdentifier,
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208 int32_t property) ORTHANC_OVERRIDE;
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209
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210 virtual void LookupIdentifier(std::list<int64_t>& target /*out*/,
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211 DatabaseManager& manager,
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212 OrthancPluginResourceType resourceType,
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213 uint16_t group,
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214 uint16_t element,
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215 OrthancPluginIdentifierConstraint constraint,
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216 const char* value) ORTHANC_OVERRIDE;
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217
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218 virtual void LookupIdentifierRange(std::list<int64_t>& target /*out*/,
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219 DatabaseManager& manager,
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220 OrthancPluginResourceType resourceType,
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221 uint16_t group,
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222 uint16_t element,
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223 const char* start,
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224 const char* end) ORTHANC_OVERRIDE;
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226 virtual bool LookupMetadata(std::string& target /*out*/,
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227 DatabaseManager& manager,
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228 int64_t id,
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229 int32_t metadataType) ORTHANC_OVERRIDE;
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230
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231 virtual bool LookupParent(int64_t& parentId /*out*/,
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232 DatabaseManager& manager,
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233 int64_t resourceId) ORTHANC_OVERRIDE;
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234
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235 virtual bool LookupResource(int64_t& id /*out*/,
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236 OrthancPluginResourceType& type /*out*/,
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237 DatabaseManager& manager,
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238 const char* publicId) ORTHANC_OVERRIDE;
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239
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240 virtual bool SelectPatientToRecycle(int64_t& internalId /*out*/,
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241 DatabaseManager& manager) ORTHANC_OVERRIDE;
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242
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243 virtual bool SelectPatientToRecycle(int64_t& internalId /*out*/,
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244 DatabaseManager& manager,
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245 int64_t patientIdToAvoid) ORTHANC_OVERRIDE;
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246
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247 virtual void SetGlobalProperty(DatabaseManager& manager,
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248 const char* serverIdentifier,
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249 int32_t property,
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250 const char* value) ORTHANC_OVERRIDE;
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251
225
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252 virtual void SetMainDicomTag(DatabaseManager& manager,
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253 int64_t id,
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254 uint16_t group,
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255 uint16_t element,
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256 const char* value) ORTHANC_OVERRIDE;
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257
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258 virtual void SetIdentifierTag(DatabaseManager& manager,
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259 int64_t id,
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260 uint16_t group,
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261 uint16_t element,
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262 const char* value) ORTHANC_OVERRIDE;
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263
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264 virtual void SetMetadata(DatabaseManager& manager,
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265 int64_t id,
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266 int32_t metadataType,
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267 const char* value) ORTHANC_OVERRIDE;
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268
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269 virtual void SetProtectedPatient(DatabaseManager& manager,
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270 int64_t internalId,
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271 bool isProtected) ORTHANC_OVERRIDE;
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272
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273 virtual uint32_t GetDatabaseVersion(DatabaseManager& manager) ORTHANC_OVERRIDE;
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274
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275 virtual void UpgradeDatabase(DatabaseManager& manager,
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276 uint32_t targetVersion,
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277 OrthancPluginStorageArea* storageArea) ORTHANC_OVERRIDE;
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278
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279 virtual void ClearMainDicomTags(DatabaseManager& manager,
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280 int64_t internalId) ORTHANC_OVERRIDE;
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281
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282 // For unit testing only!
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283 virtual uint64_t GetAllResourcesCount(DatabaseManager& manager);
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284
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285 // For unit testing only!
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286 virtual uint64_t GetUnprotectedPatientsCount(DatabaseManager& manager);
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287
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288 // For unit testing only!
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289 virtual bool GetParentPublicId(std::string& target,
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290 DatabaseManager& manager,
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291 int64_t id);
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292
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293 // For unit tests only!
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294 virtual void GetChildren(std::list<std::string>& childrenPublicIds,
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295 DatabaseManager& manager,
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296 int64_t id);
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297
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298 #if ORTHANC_PLUGINS_HAS_DATABASE_CONSTRAINT == 1
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299 // New primitive since Orthanc 1.5.2
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300 virtual void LookupResources(IDatabaseBackendOutput& output,
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301 DatabaseManager& manager,
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302 const std::vector<Orthanc::DatabaseConstraint>& lookup,
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303 OrthancPluginResourceType queryLevel,
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304 uint32_t limit,
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305 bool requestSomeInstance) ORTHANC_OVERRIDE;
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306 #endif
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307
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308 #if ORTHANC_PLUGINS_HAS_DATABASE_CONSTRAINT == 1
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309 // New primitive since Orthanc 1.5.2
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310 virtual void SetResourcesContent(
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311 DatabaseManager& manager,
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312 uint32_t countIdentifierTags,
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313 const OrthancPluginResourcesContentTags* identifierTags,
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314 uint32_t countMainDicomTags,
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315 const OrthancPluginResourcesContentTags* mainDicomTags,
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316 uint32_t countMetadata,
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317 const OrthancPluginResourcesContentMetadata* metadata) ORTHANC_OVERRIDE;
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318 #endif
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319
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320 // New primitive since Orthanc 1.5.2
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321 virtual void GetChildrenMetadata(std::list<std::string>& target,
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322 DatabaseManager& manager,
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323 int64_t resourceId,
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324 int32_t metadata) ORTHANC_OVERRIDE;
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325
225
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326 virtual void TagMostRecentPatient(DatabaseManager& manager,
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327 int64_t patient) ORTHANC_OVERRIDE;
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328
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329 #if defined(ORTHANC_PLUGINS_VERSION_IS_ABOVE) // Macro introduced in 1.3.1
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330 # if ORTHANC_PLUGINS_VERSION_IS_ABOVE(1, 5, 4)
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331 // New primitive since Orthanc 1.5.4
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332 virtual bool LookupResourceAndParent(int64_t& id,
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333 OrthancPluginResourceType& type,
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334 std::string& parentPublicId,
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335 DatabaseManager& manager,
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336 const char* publicId) ORTHANC_OVERRIDE;
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337 # endif
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338 #endif
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339
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340 #if defined(ORTHANC_PLUGINS_VERSION_IS_ABOVE) // Macro introduced in 1.3.1
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341 # if ORTHANC_PLUGINS_VERSION_IS_ABOVE(1, 5, 4)
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342 // New primitive since Orthanc 1.5.4
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343 virtual void GetAllMetadata(std::map<int32_t, std::string>& result,
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344 DatabaseManager& manager,
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345 int64_t id) ORTHANC_OVERRIDE;
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346 # endif
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347 #endif
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348
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349 virtual bool HasCreateInstance() const ORTHANC_OVERRIDE
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350 {
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351 // This extension is available in PostgreSQL and MySQL, but is
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352 // emulated by "CreateInstanceGeneric()" in SQLite
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353 return false;
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354 }
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355
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356 #if ORTHANC_PLUGINS_HAS_DATABASE_CONSTRAINT == 1
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357 virtual void CreateInstance(OrthancPluginCreateInstanceResult& result,
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358 DatabaseManager& manager,
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359 const char* hashPatient,
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360 const char* hashStudy,
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361 const char* hashSeries,
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362 const char* hashInstance) ORTHANC_OVERRIDE
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363 {
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364 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError);
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365 }
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366 #endif
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367
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368 // This function corresponds to
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369 // "Orthanc::Compatibility::ICreateInstance::Apply()"
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370 void CreateInstanceGeneric(OrthancPluginCreateInstanceResult& result,
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371 DatabaseManager& manager,
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372 const char* hashPatient,
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373 const char* hashStudy,
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374 const char* hashSeries,
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375 const char* hashInstance);
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376
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377 static void Register(IndexBackend* backend);
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378
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379 static void Finalize();
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380
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381 static DatabaseManager* CreateSingleDatabaseManager(IDatabaseBackend& backend);
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382 };
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383 }