Mercurial > hg > orthanc-book
annotate Sphinx/source/users/cookbook.rst @ 991:1316bc62b5d5
migration to UCLouvain servers
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
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| date | Tue, 21 Nov 2023 21:09:02 +0100 |
| parents | 74248236d70c |
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| rev | line source |
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| 0 | 1 .. highlight:: bash |
| 2 .. _cookbook: | |
| 3 | |
| 4 Quickstart | |
| 5 ========== | |
| 6 | |
| 7 .. contents:: | |
| 8 :depth: 2 | |
| 9 | |
| 10 | |
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11 .. _binaries: |
| 28 | 12 |
| 0 | 13 Obtaining binaries |
| 14 ------------------ | |
| 15 | |
| 16 To obtain the Orthanc binaries, you have several possibilities: | |
| 17 | |
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18 * `Download pre-compiled packages <https://www.orthanc-server.com/download.php>`__. |
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19 * Use ``jodogne/orthanc`` :ref:`Docker images <docker>`. |
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20 * Use ``osimis/orthanc`` :ref:`Docker images <docker-osimis>`. |
| 572 | 21 * On GNU/Linux, use precompiled packages for :ref:`Debian/Ubuntu |
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22 <debian-packages>` (courtesy of DebianMed and Sébastien Jodogne), or |
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23 for `openSUSE <https://software.opensuse.org/search?q=orthanc>`__ |
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24 (courtesy of Axel Braun). |
| 574 | 25 * On GNU/Linux, use our `LSB binaries |
| 26 <https://lsb.orthanc-server.com/>`__ (Linux Standard Base), that | |
| 27 should easily and immediately run on most distributions. Those | |
| 28 binaries are statically linked together with all their third-party | |
| 669 | 29 dependencies. Don't forget to execute ``chmod +x ./Orthanc`` in |
| 30 order to be able to run the main Orthanc executable. | |
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31 * :ref:`Compile Orthanc by yourself <compiling>`. |
| 26 | 32 * External contributors are also maintaining `Vagrant VM for Orthanc |
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33 <https://github.com/jodogne/OrthancContributed/blob/master/Links.md#user-content-vagrant>`__. |
| 0 | 34 |
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35 .. highlight:: bash |
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36 |
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37 Furthermore, if you are running Debian 9 (stretch), Debian 10 |
| 958 | 38 (buster), Debian 11 (bullseye), Debian 12 (bookworm), Ubuntu 18.04 LTS |
| 39 (bionic), Ubuntu 20.04 LTS (focal), or Ubuntu 22.04 LTS (jammy) on an | |
| 40 **AMD64 architecture**, Sébastien Jodogne maintains a **standalone | |
| 41 Debian repository** that provides the latest versions of the LSB | |
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42 binaries. For instance, here is how to install the :ref:`Stone Web |
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43 viewer <stone_webviewer>` on a barebone Docker setup:: |
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44 |
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45 # docker run --rm -t -i -p 8042:8042 -p 4242:4242 debian:9 |
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46 |
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47 $ apt update |
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48 $ DEBIAN_FRONTEND=noninteractive apt install -y software-properties-common wget curl nano gnupg apt-transport-https |
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49 |
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50 $ apt install --upgrade ca-certificates |
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51 $ wget -qO - https://debian.orthanc-labs.com/archive.key | apt-key add - |
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52 $ apt-add-repository "deb https://debian.orthanc-labs.com/ `grep VERSION_CODENAME /etc/os-release | cut -d'=' -f 2` main" |
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53 |
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54 $ apt clean && apt update |
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55 $ apt install orthanc-stone-webviewer |
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56 $ /etc/init.d/orthanc start |
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57 |
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58 Note that this standalone Debian repository **does not** contain the |
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59 :ref:`Python plugin <python-plugin>`, as this plugin must be |
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60 dynamically linked against the system-wide version of your Python |
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61 runtime. You should install the ``orthanc-python`` package from your |
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62 native Debian/Ubuntu distribution if available, or compile the plugin |
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63 from sources. |
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64 |
| 0 | 65 |
| 66 .. _orthanc-explorer: | |
| 67 | |
| 68 Opening Orthanc Explorer | |
| 69 ------------------------ | |
| 70 | |
| 71 The most straightforward way to use Orthanc consists in opening | |
| 72 **Orthanc Explorer**, the embedded administrative interface of | |
| 73 Orthanc, with a Web browser. Once Orthanc is running, open the | |
| 74 following URL: http://localhost:8042/app/explorer.html. Please note | |
| 75 that: | |
| 76 | |
| 77 * The port number 8042 depends on your :ref:`configuration | |
| 78 <configuration>`. | |
| 79 * Orthanc Explorer does not work with Microsoft Internet | |
| 80 Explorer. Please use Mozilla Firefox, Google Chrome, Apple Safari, | |
| 81 or `any WebKit-based Web browser <https://en.wikipedia.org/wiki/WebKit>`__. | |
| 82 | |
| 83 | |
| 84 Uploading DICOM files | |
| 85 --------------------- | |
| 86 | |
| 87 The Orthanc Explorer interface contains a user-friendly page to upload | |
| 88 DICOM files. You can reach the upload page at | |
| 89 http://localhost:8042/app/explorer.html#upload. Then, you can drag and | |
| 90 drop your DICOM files and click on the Upload button. | |
| 91 | |
| 92 You can `watch this video tutorial | |
| 93 <https://www.youtube.com/watch?v=4dOcXGMlcFo&hd=1>`__ that shows how | |
| 26 | 94 to upload files to Orthanc through Orthanc Explorer with Chromium. |
| 95 | |
| 96 **Important:** There is currently a `known issue | |
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97 <https://orthanc.uclouvain.be/bugs/show_bug.cgi?id=21>`__ that might |
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98 prevent Mozilla Firefox to correctly upload all DICOM files if using |
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99 drag-and-drop. |
| 0 | 100 |
| 101 | |
| 102 Uploading through the DICOM protocol | |
| 103 ------------------------------------ | |
| 104 | |
| 105 Once Orthanc is up and running, any imaging modality can send | |
| 106 instances to Orthanc through the DICOM protocol (with the C-Store | |
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107 command). Check :ref:`this tutorial <configure-modality>` to |
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108 connect your modality to Orthanc. |
| 0 | 109 |
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110 You can also use the standard command-line tool ``storescu`` from the |
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111 `DCMTK software <https://dicom.offis.de/dcmtk.php.en>`__ to manually |
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112 send DICOM images to Orthanc, for instance:: |
| 0 | 113 |
| 114 $ storescu -aec ORTHANC localhost 4242 *.dcm | |
| 115 | |
| 116 will send all the files with ".dcm" extension to the instance of | |
| 117 Orthanc that is running on the ``localhost``, whose application entity | |
| 118 title (AET) is ``ORTHANC``, and whose DICOM port is | |
| 119 ``4242``. Obviously, all these parameters depend on your | |
| 120 :ref:`configuration <configuration>`. Please check the :ref:`FAQ | |
| 121 <dicom>` if you encounter any problem. | |
| 122 | |
| 123 | |
| 124 Next steps | |
| 125 ---------- | |
| 126 | |
| 127 1. Read the general introduction ":ref:`dicom-guide`". | |
| 128 2. Have a look at your :ref:`configuration file <configuration>`. | |
| 129 3. Drive Orthanc through its :ref:`REST API <rest>`. | |
| 130 4. Automate DICOM tasks with :ref:`Lua scripts <lua>`. | |
| 131 |