Mercurial > hg > orthanc
changeset 4235:b3ec19f369d1
working on sorting by dates
author | Sebastien Jodogne <s.jodogne@gmail.com> |
---|---|
date | Thu, 08 Oct 2020 18:13:01 +0200 |
parents | a38376b80cd1 |
children | 5639ffda467b |
files | OrthancServer/Sources/main.cpp |
diffstat | 1 files changed, 300 insertions(+), 72 deletions(-) [+] |
line wrap: on
line diff
--- a/OrthancServer/Sources/main.cpp Thu Oct 08 13:38:44 2020 +0200 +++ b/OrthancServer/Sources/main.cpp Thu Oct 08 18:13:01 2020 +0200 @@ -779,13 +779,14 @@ static const char* const BY_PATIENTS = "by-patients"; static const char* const BY_STUDIES = "by-studies"; +static const char* const BY_DATE = "by-date"; static const char* const BY_UIDS = "by-uids"; static const char* const MAIN_DICOM_TAGS = "MainDicomTags"; class DummyBucket2 : public IWebDavBucket // TODO { private: - ServerContext& context_; + typedef std::map<ResourceType, std::string> Templates; static void LookupTime(boost::posix_time::ptime& target, @@ -820,8 +821,8 @@ public: DicomIdentifiersVisitor(ServerContext& context, - Collection& target, - ResourceType level) : + Collection& target, + ResourceType level) : context_(context), isComplete_(false), target_(target), @@ -1311,10 +1312,11 @@ private: typedef std::map<std::string, INode*> Children; - ServerContext& context_; - ResourcesIndex index_; - MetadataType timeMetadata_; - Children children_; // Maps Orthanc resource IDs to subnodes + ServerContext& context_; + const Templates& templates_; + std::unique_ptr<ResourcesIndex> index_; + MetadataType timeMetadata_; + Children children_; // Maps Orthanc resource IDs to subnodes void Refresh() { @@ -1322,7 +1324,7 @@ GetCurrentResources(resources); std::set<std::string> removedPaths; - index_.Refresh(removedPaths, std::set<std::string>(resources.begin(), resources.end())); + index_->Refresh(removedPaths, std::set<std::string>(resources.begin(), resources.end())); // Remove the children that have been removed for (std::set<std::string>::const_iterator @@ -1340,8 +1342,8 @@ INode* GetChild(const std::string& path) // Don't free the resulting pointer! { - ResourcesIndex::Map::const_iterator resource = index_.GetPathToResource().find(path); - if (resource == index_.GetPathToResource().end()) + ResourcesIndex::Map::const_iterator resource = index_->GetPathToResource().find(path); + if (resource == index_->GetPathToResource().end()) { return NULL; } @@ -1382,10 +1384,18 @@ public: ResourcesNode(ServerContext& context, ResourceType level, - const std::string& templateString) : + const Templates& templates) : context_(context), - index_(context, level, templateString) + templates_(templates) { + Templates::const_iterator t = templates.find(level); + if (t == templates.end()) + { + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + index_.reset(new ResourcesIndex(context, level, t->second)); + if (level == ResourceType_Instance) { timeMetadata_ = MetadataType_Instance_ReceptionDate; @@ -1407,7 +1417,12 @@ ResourceType GetLevel() const { - return index_.GetLevel(); + return index_->GetLevel(); + } + + const Templates& GetTemplates() const + { + return templates_; } virtual bool ListCollection(IWebDavBucket::Collection& target, @@ -1415,14 +1430,14 @@ { Refresh(); - if (index_.GetLevel() == ResourceType_Instance) + if (index_->GetLevel() == ResourceType_Instance) { // Not a collection, no subfolders return false; } else if (path.empty()) { - const ResourcesIndex::Map& paths = index_.GetPathToResource(); + const ResourcesIndex::Map& paths = index_->GetPathToResource(); for (ResourcesIndex::Map::const_iterator it = paths.begin(); it != paths.end(); ++it) { @@ -1482,7 +1497,7 @@ - class ParentNode : public ResourcesNode + class ResourceChildrenNode : public ResourcesNode { private: std::string parentId_; @@ -1513,33 +1528,17 @@ } else { - std::string t; - ResourceType l = GetChildResourceType(GetLevel()); - switch (l) - { - case ResourceType_Study: - t = "{{StudyDate}} - {{StudyDescription}}"; - break; - - case ResourceType_Series: - t = "{{Modality}} - {{SeriesDescription}}"; - break; - - default: - throw OrthancException(ErrorCode_InternalError); - } - - return new ParentNode(GetContext(), l, resource, t); + return new ResourceChildrenNode(GetContext(), l, resource, GetTemplates()); } } public: - ParentNode(ServerContext& context, - ResourceType level, - const std::string& parentId, - const std::string& templateString) : - ResourcesNode(context, level, templateString), + ResourceChildrenNode(ServerContext& context, + ResourceType level, + const std::string& parentId, + const Templates& templates) : + ResourcesNode(context, level, templates), parentId_(parentId) { } @@ -1562,50 +1561,265 @@ } else { - std::string t; - ResourceType l = GetChildResourceType(GetLevel()); - switch (l) - { - case ResourceType_Study: - t = "{{StudyDate}} - {{StudyDescription}}"; - break; - - case ResourceType_Series: - t = "{{Modality}} - {{SeriesDescription}}"; - break; - - default: - throw OrthancException(ErrorCode_InternalError); - } - - printf("OPENING CHILDREN of %s %s\n", EnumerationToString(GetLevel()), resource.c_str()); - - return new ParentNode(GetContext(), l, resource, t); + return new ResourceChildrenNode(GetContext(), l, resource, GetTemplates()); } } public: RootNode(ServerContext& context, ResourceType level, - const std::string& templateString) : - ResourcesNode(context, level, templateString) + const Templates& templates) : + ResourcesNode(context, level, templates) { } }; - + + + + class NodeWithChildren : public INode + { + private: + typedef std::map<std::string, INode*> Children; + + Children children_; + + INode* GetChild(const std::string& path) // Don't delete the result pointer! + { + Children::const_iterator found = children_.find(path); + if (found == children_.end()) + { + INode* child = CreateChild(path); + + if (child == NULL) + { + return NULL; + } + else + { + children_[path] = child; + return child; + } + } + else + { + assert(found->second != NULL); + return found->second; + } + } + + protected: + virtual void ListContent(IWebDavBucket::Collection& target) = 0; + + virtual INode* CreateChild(const std::string& path) = 0; + + public: + virtual ~NodeWithChildren() + { + for (Children::iterator it = children_.begin(); it != children_.end(); ++it) + { + assert(it->second != NULL); + delete it->second; + } + } + + virtual bool ListCollection(IWebDavBucket::Collection& target, + const UriComponents& path) ORTHANC_OVERRIDE + { + if (path.empty()) + { + ListContent(target); + return true; + } + else + { + INode* child = GetChild(path[0]); + if (child == NULL) + { + return false; + } + else + { + UriComponents subpath(path.begin() + 1, path.end()); + return child->ListCollection(target, subpath); + } + } + } + + virtual bool GetFileContent(MimeType& mime, + std::string& content, + boost::posix_time::ptime& time, + const UriComponents& path) ORTHANC_OVERRIDE + { + if (path.empty()) + { + return false; + } + else + { + INode* child = GetChild(path[0]); + if (child == NULL) + { + return false; + } + else + { + UriComponents subpath(path.begin() + 1, path.end()); + return child->GetFileContent(mime, content, time, subpath); + } + } + } + }; - RootNode patients_; - RootNode studies_; + class StudyMonthsNode : public NodeWithChildren + { + private: + ServerContext& context_; + std::string year_; + const Templates& templates_; + + class Visitor : public ServerContext::ILookupVisitor + { + private: + std::set<std::string> months_; + + public: + Visitor() + { + } + + const std::set<std::string>& GetMonths() const + { + return months_; + } + + virtual bool IsDicomAsJsonNeeded() const ORTHANC_OVERRIDE + { + return false; // (*) + } + + virtual void MarkAsComplete() ORTHANC_OVERRIDE + { + } + + virtual void Visit(const std::string& publicId, + const std::string& instanceId /* unused */, + const DicomMap& mainDicomTags, + const Json::Value* dicomAsJson /* unused (*) */) ORTHANC_OVERRIDE + { + std::string s; + if (mainDicomTags.LookupStringValue(s, DICOM_TAG_STUDY_DATE, false) && + s.size() == 8) + { + months_.insert(s.substr(4, 2)); // Get the month from "YYYYMMDD" + } + } + }; + + protected: + virtual void ListContent(IWebDavBucket::Collection& target) + { + DatabaseLookup query; + query.AddRestConstraint(DICOM_TAG_STUDY_DATE, year_ + "0101-" + year_ + "1231", + true /* case sensitive */, true /* mandatory tag */); + + Visitor visitor; + context_.Apply(visitor, query, ResourceType_Study, 0 /* since */, 0 /* no limit */); + + for (std::set<std::string>::const_iterator it = visitor.GetMonths().begin(); + it != visitor.GetMonths().end(); ++it) + { + target.AddResource(new IWebDavBucket::Folder(year_ + "-" + *it)); + } + } + + virtual INode* CreateChild(const std::string& path) ORTHANC_OVERRIDE + { + return NULL; + } + + public: + StudyMonthsNode(ServerContext& context, + const std::string& year, + const Templates& templates) : + context_(context), + year_(year), + templates_(templates) + { + } + }; + + + class StudyYearsNode : public NodeWithChildren + { + private: + ServerContext& context_; + const Templates& templates_; + + protected: + virtual void ListContent(IWebDavBucket::Collection& target) + { + std::list<std::string> resources; + context_.GetIndex().GetAllUuids(resources, ResourceType_Study); + + std::set<std::string> years; + + for (std::list<std::string>::const_iterator it = resources.begin(); it != resources.end(); ++it) + { + DicomMap tags; + std::string studyDate; + if (context_.GetIndex().GetMainDicomTags(tags, *it, ResourceType_Study, ResourceType_Study) && + tags.LookupStringValue(studyDate, DICOM_TAG_STUDY_DATE, false) && + studyDate.size() == 8) + { + years.insert(studyDate.substr(0, 4)); // Get the year from "YYYYMMDD" + } + } + + for (std::set<std::string>::const_iterator it = years.begin(); it != years.end(); ++it) + { + target.AddResource(new IWebDavBucket::Folder(*it)); + } + } + + virtual INode* CreateChild(const std::string& path) ORTHANC_OVERRIDE + { + return new StudyMonthsNode(context_, path, templates_); + } + + public: + StudyYearsNode(ServerContext& context, + const Templates& templates) : + context_(context), + templates_(templates) + { + } + }; + + + ServerContext& context_; + std::unique_ptr<INode> patients_; + std::unique_ptr<INode> studies_; + std::unique_ptr<INode> dates_; + Templates patientsTemplates_; + Templates studiesTemplates_; public: DummyBucket2(ServerContext& context) : - context_(context), - patients_(context, ResourceType_Patient, "{{PatientID}} - {{PatientName}}"), - studies_(context, ResourceType_Study, "{{PatientID}} - {{PatientName}} - {{StudyDescription}}") + context_(context) { + patientsTemplates_[ResourceType_Patient] = "{{PatientID}} - {{PatientName}}"; + patientsTemplates_[ResourceType_Study] = "{{StudyDate}} - {{StudyDescription}}"; + patientsTemplates_[ResourceType_Series] = "{{Modality}} - {{SeriesDescription}}"; + + studiesTemplates_[ResourceType_Study] = "{{PatientID}} - {{PatientName}} - {{StudyDescription}}"; + studiesTemplates_[ResourceType_Series] = patientsTemplates_[ResourceType_Series]; + + patients_.reset(new RootNode(context, ResourceType_Patient, patientsTemplates_)); + studies_.reset(new RootNode(context, ResourceType_Study, studiesTemplates_)); + dates_.reset(new StudyYearsNode(context, studiesTemplates_)); } virtual bool IsExistingFolder(const UriComponents& path) ORTHANC_OVERRIDE @@ -1622,12 +1836,17 @@ else if (path[0] == BY_PATIENTS) { IWebDavBucket::Collection tmp; - return patients_.ListCollection(tmp, UriComponents(path.begin() + 1, path.end())); + return patients_->ListCollection(tmp, UriComponents(path.begin() + 1, path.end())); } else if (path[0] == BY_STUDIES) { IWebDavBucket::Collection tmp; - return studies_.ListCollection(tmp, UriComponents(path.begin() + 1, path.end())); + return studies_->ListCollection(tmp, UriComponents(path.begin() + 1, path.end())); + } + else if (path[0] == BY_DATE) + { + IWebDavBucket::Collection tmp; + return dates_->ListCollection(tmp, UriComponents(path.begin() + 1, path.end())); } else { @@ -1640,9 +1859,10 @@ { if (path.empty()) { - collection.AddResource(new Folder(BY_UIDS)); + collection.AddResource(new Folder(BY_DATE)); collection.AddResource(new Folder(BY_PATIENTS)); collection.AddResource(new Folder(BY_STUDIES)); + collection.AddResource(new Folder(BY_UIDS)); return true; } else if (path[0] == BY_UIDS) @@ -1686,11 +1906,15 @@ } else if (path[0] == BY_PATIENTS) { - return patients_.ListCollection(collection, UriComponents(path.begin() + 1, path.end())); + return patients_->ListCollection(collection, UriComponents(path.begin() + 1, path.end())); } else if (path[0] == BY_STUDIES) { - return studies_.ListCollection(collection, UriComponents(path.begin() + 1, path.end())); + return studies_->ListCollection(collection, UriComponents(path.begin() + 1, path.end())); + } + else if (path[0] == BY_DATE) + { + return dates_->ListCollection(collection, UriComponents(path.begin() + 1, path.end())); } else { @@ -1760,11 +1984,15 @@ } else if (path[0] == BY_PATIENTS) { - return patients_.GetFileContent(mime, content, modificationTime, UriComponents(path.begin() + 1, path.end())); + return patients_->GetFileContent(mime, content, modificationTime, UriComponents(path.begin() + 1, path.end())); } else if (path[0] == BY_STUDIES) { - return studies_.GetFileContent(mime, content, modificationTime, UriComponents(path.begin() + 1, path.end())); + return studies_->GetFileContent(mime, content, modificationTime, UriComponents(path.begin() + 1, path.end())); + } + else if (path[0] == BY_DATE) + { + return dates_->GetFileContent(mime, content, modificationTime, UriComponents(path.begin() + 1, path.end())); } return false;