view OrthancServer/OrthancMoveRequestHandler.cpp @ 2294:e371519d4ac9

added -U option to gdcmconv to prevent gdcmconv to mess up the files. Without that option, we have seen the SpecificCharSet tag becoming invalid !!! (seen on the VIX samples)
author Alain Mazy <am@osimis.io>
date Tue, 04 Jul 2017 15:36:19 +0000
parents a3a65de1840f
children 7284093111b0
line wrap: on
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/**
 * Orthanc - A Lightweight, RESTful DICOM Store
 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
 * Department, University Hospital of Liege, Belgium
 * Copyright (C) 2017 Osimis, Belgium
 *
 * This program is free software: you can redistribute it and/or
 * modify it under the terms of the GNU General Public License as
 * published by the Free Software Foundation, either version 3 of the
 * License, or (at your option) any later version.
 *
 * In addition, as a special exception, the copyright holders of this
 * program give permission to link the code of its release with the
 * OpenSSL project's "OpenSSL" library (or with modified versions of it
 * that use the same license as the "OpenSSL" library), and distribute
 * the linked executables. You must obey the GNU General Public License
 * in all respects for all of the code used other than "OpenSSL". If you
 * modify file(s) with this exception, you may extend this exception to
 * your version of the file(s), but you are not obligated to do so. If
 * you do not wish to do so, delete this exception statement from your
 * version. If you delete this exception statement from all source files
 * in the program, then also delete it here.
 * 
 * This program is distributed in the hope that it will be useful, but
 * WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
 * General Public License for more details.
 *
 * You should have received a copy of the GNU General Public License
 * along with this program. If not, see <http://www.gnu.org/licenses/>.
 **/


#include "PrecompiledHeadersServer.h"
#include "OrthancMoveRequestHandler.h"

#include "OrthancInitialization.h"
#include "FromDcmtkBridge.h"
#include "../Core/DicomFormat/DicomArray.h"
#include "../Core/Logging.h"

namespace Orthanc
{
  namespace
  {
    // Anonymous namespace to avoid clashes between compilation modules

    class OrthancMoveRequestIterator : public IMoveRequestIterator
    {
    private:
      ServerContext& context_;
      const std::string& localAet_;
      std::vector<std::string> instances_;
      size_t position_;
      RemoteModalityParameters remote_;
      std::string originatorAet_;
      uint16_t originatorId_;

    public:
      OrthancMoveRequestIterator(ServerContext& context,
                                 const std::string& aet,
                                 const std::string& publicId,
                                 const std::string& originatorAet,
                                 uint16_t originatorId) :
        context_(context),
        localAet_(context.GetDefaultLocalApplicationEntityTitle()),
        position_(0),
        originatorAet_(originatorAet),
        originatorId_(originatorId)
      {
        LOG(INFO) << "Sending resource " << publicId << " to modality \"" << aet << "\"";

        std::list<std::string> tmp;
        context_.GetIndex().GetChildInstances(tmp, publicId);

        instances_.reserve(tmp.size());
        for (std::list<std::string>::iterator it = tmp.begin(); it != tmp.end(); ++it)
        {
          instances_.push_back(*it);
        }

        remote_ = Configuration::GetModalityUsingAet(aet);
      }

      virtual unsigned int GetSubOperationCount() const
      {
        return instances_.size();
      }

      virtual Status DoNext()
      {
        if (position_ >= instances_.size())
        {
          return Status_Failure;
        }

        const std::string& id = instances_[position_++];

        std::string dicom;
        context_.ReadDicom(dicom, id);

        {
          ReusableDicomUserConnection::Locker locker
            (context_.GetReusableDicomUserConnection(), localAet_, remote_);
          locker.GetConnection().Store(dicom, originatorAet_, originatorId_);
        }

        return Status_Success;
      }
    };
  }


  bool OrthancMoveRequestHandler::LookupIdentifier(std::string& publicId,
                                                   ResourceType level,
                                                   const DicomMap& input)
  {
    DicomTag tag(0, 0);   // Dummy initialization

    switch (level)
    {
      case ResourceType_Patient:
        tag = DICOM_TAG_PATIENT_ID;
        break;

      case ResourceType_Study:
        tag = (input.HasTag(DICOM_TAG_ACCESSION_NUMBER) ? 
               DICOM_TAG_ACCESSION_NUMBER : DICOM_TAG_STUDY_INSTANCE_UID);
        break;
        
      case ResourceType_Series:
        tag = DICOM_TAG_SERIES_INSTANCE_UID;
        break;
        
      case ResourceType_Instance:
        tag = DICOM_TAG_SOP_INSTANCE_UID;
        break;

      default:
        throw OrthancException(ErrorCode_ParameterOutOfRange);
    }

    if (!input.HasTag(tag))
    {
      return false;
    }

    const DicomValue& value = input.GetValue(tag);
    if (value.IsNull() ||
        value.IsBinary())
    {
      return false;
    }

    const std::string& content = value.GetContent();

    std::list<std::string> ids;
    context_.GetIndex().LookupIdentifierExact(ids, level, tag, content);

    if (ids.size() != 1)
    {
      return false;
    }
    else
    {
      publicId = ids.front();
      return true;
    }
  }


  IMoveRequestIterator* OrthancMoveRequestHandler::Handle(const std::string& targetAet,
                                                          const DicomMap& input,
                                                          const std::string& originatorIp,
                                                          const std::string& originatorAet,
                                                          const std::string& calledAet,
                                                          uint16_t originatorId)
  {
    LOG(WARNING) << "Move-SCU request received for AET \"" << targetAet << "\"";

    {
      DicomArray query(input);
      for (size_t i = 0; i < query.GetSize(); i++)
      {
        if (!query.GetElement(i).GetValue().IsNull())
        {
          LOG(INFO) << "  " << query.GetElement(i).GetTag()
                    << "  " << FromDcmtkBridge::GetTagName(query.GetElement(i))
                    << " = " << query.GetElement(i).GetValue().GetContent();
        }
      }
    }


    /**
     * Retrieve the query level.
     **/

    const DicomValue* levelTmp = input.TestAndGetValue(DICOM_TAG_QUERY_RETRIEVE_LEVEL);

    if (levelTmp == NULL ||
        levelTmp->IsNull() ||
        levelTmp->IsBinary())
    {
      // The query level is not present in the C-Move request, which
      // does not follow the DICOM standard. This is for instance the
      // behavior of Tudor DICOM. Try and automatically deduce the
      // query level: Start from the instance level, going up to the
      // patient level until a valid DICOM identifier is found.

      std::string publicId;

      if (LookupIdentifier(publicId, ResourceType_Instance, input) ||
          LookupIdentifier(publicId, ResourceType_Series, input) ||
          LookupIdentifier(publicId, ResourceType_Study, input) ||
          LookupIdentifier(publicId, ResourceType_Patient, input))
      {
        return new OrthancMoveRequestIterator(context_, targetAet, publicId, originatorAet, originatorId);
      }
      else
      {
        // No identifier is present in the request.
        throw OrthancException(ErrorCode_BadRequest);
      }
    }

    assert(levelTmp != NULL);
    ResourceType level = StringToResourceType(levelTmp->GetContent().c_str());      


    /**
     * Lookup for the resource to be sent.
     **/

    std::string publicId;

    if (LookupIdentifier(publicId, level, input))
    {
      return new OrthancMoveRequestIterator(context_, targetAet, publicId, originatorAet, originatorId);
    }
    else
    {
      throw OrthancException(ErrorCode_BadRequest);
    }
  }
}