Mercurial > hg > orthanc
view Core/DicomParsing/DicomModification.h @ 3815:c81ac6ff232b
ImportDicomFiles.py is now compatible
with both Python 2.7 and Python 3.x (tested
with >= 3.5)
author | Benjamin Golinvaux <bgo@osimis.io> |
---|---|
date | Wed, 08 Apr 2020 14:01:37 +0200 |
parents | 1f4910999fe7 |
children | 9ccbbd55bc23 |
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/** * Orthanc - A Lightweight, RESTful DICOM Store * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics * Department, University Hospital of Liege, Belgium * Copyright (C) 2017-2020 Osimis S.A., Belgium * * This program is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License as * published by the Free Software Foundation, either version 3 of the * License, or (at your option) any later version. * * In addition, as a special exception, the copyright holders of this * program give permission to link the code of its release with the * OpenSSL project's "OpenSSL" library (or with modified versions of it * that use the same license as the "OpenSSL" library), and distribute * the linked executables. You must obey the GNU General Public License * in all respects for all of the code used other than "OpenSSL". If you * modify file(s) with this exception, you may extend this exception to * your version of the file(s), but you are not obligated to do so. If * you do not wish to do so, delete this exception statement from your * version. If you delete this exception statement from all source files * in the program, then also delete it here. * * This program is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program. If not, see <http://www.gnu.org/licenses/>. **/ #pragma once #include "ParsedDicomFile.h" namespace Orthanc { class DicomModification : public boost::noncopyable { /** * Process: * (1) Remove private tags * (2) Remove tags specified by the user * (3) Replace tags **/ public: enum TagOperation { TagOperation_Keep, TagOperation_Remove }; class IDicomIdentifierGenerator : public boost::noncopyable { public: virtual ~IDicomIdentifierGenerator() { } virtual bool Apply(std::string& target, const std::string& sourceIdentifier, ResourceType level, const DicomMap& sourceDicom) = 0; }; private: class RelationshipsVisitor; typedef std::set<DicomTag> SetOfTags; typedef std::map<DicomTag, Json::Value*> Replacements; typedef std::map< std::pair<ResourceType, std::string>, std::string> UidMap; SetOfTags removals_; SetOfTags clearings_; Replacements replacements_; bool removePrivateTags_; ResourceType level_; UidMap uidMap_; SetOfTags privateTagsToKeep_; bool allowManualIdentifiers_; bool keepStudyInstanceUid_; bool keepSeriesInstanceUid_; bool updateReferencedRelationships_; bool isAnonymization_; DicomMap currentSource_; std::string privateCreator_; IDicomIdentifierGenerator* identifierGenerator_; std::string MapDicomIdentifier(const std::string& original, ResourceType level); void RegisterMappedDicomIdentifier(const std::string& original, const std::string& mapped, ResourceType level); void MapDicomTags(ParsedDicomFile& dicom, ResourceType level); void MarkNotOrthancAnonymization(); void ClearReplacements(); bool CancelReplacement(const DicomTag& tag); void ReplaceInternal(const DicomTag& tag, const Json::Value& value); void SetupAnonymization2008(); void SetupAnonymization2017c(); void UnserializeUidMap(ResourceType level, const Json::Value& serialized, const char* field); public: DicomModification(); DicomModification(const Json::Value& serialized); ~DicomModification(); void Keep(const DicomTag& tag); void Remove(const DicomTag& tag); // Replace the DICOM tag as a NULL/empty value (e.g. for anonymization) void Clear(const DicomTag& tag); bool IsRemoved(const DicomTag& tag) const; bool IsCleared(const DicomTag& tag) const; // "safeForAnonymization" tells Orthanc that this replacement does // not break the anonymization process it implements (for internal use only) void Replace(const DicomTag& tag, const Json::Value& value, // Encoded using UTF-8 bool safeForAnonymization); bool IsReplaced(const DicomTag& tag) const; const Json::Value& GetReplacement(const DicomTag& tag) const; std::string GetReplacementAsString(const DicomTag& tag) const; void SetRemovePrivateTags(bool removed); bool ArePrivateTagsRemoved() const { return removePrivateTags_; } void SetLevel(ResourceType level); ResourceType GetLevel() const { return level_; } void SetupAnonymization(DicomVersion version); void Apply(ParsedDicomFile& toModify); void SetAllowManualIdentifiers(bool check) { allowManualIdentifiers_ = check; } bool AreAllowManualIdentifiers() const { return allowManualIdentifiers_; } void ParseModifyRequest(const Json::Value& request); void ParseAnonymizationRequest(bool& patientNameReplaced, const Json::Value& request); void SetDicomIdentifierGenerator(IDicomIdentifierGenerator& generator) { identifierGenerator_ = &generator; } void Serialize(Json::Value& value) const; void SetPrivateCreator(const std::string& privateCreator) { privateCreator_ = privateCreator; } const std::string& GetPrivateCreator() { return privateCreator_; } }; }