Mercurial > hg > orthanc
view Resources/Samples/ImportDicomFiles/ImportDicomFiles.py @ 745:9076a986c451
code clarification
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Tue, 01 Apr 2014 16:29:41 +0200 |
parents | 29982cfc5009 |
children | 44382c8bcd15 |
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#!/usr/bin/python import os import sys import os.path import httplib2 import base64 if len(sys.argv) != 4 and len(sys.argv) != 6: print(""" Sample script to recursively import in Orthanc all the DICOM files that are stored in some path. Please make sure that Orthanc is running before starting this script. The files are uploaded through the REST API. Usage: %s [hostname] [HTTP port] [path] Usage: %s [hostname] [HTTP port] [path] [username] [password] For instance: %s localhost 8042 . """ % (sys.argv[0], sys.argv[0], sys.argv[0])) exit(-1) URL = 'http://%s:%d/instances' % (sys.argv[1], int(sys.argv[2])) success_count = 0 total_file_count = 0 # This function will upload a single file to Orthanc through the REST API def UploadFile(path): global success_count global total_file_count f = open(path, "rb") content = f.read() f.close() total_file_count += 1 try: sys.stdout.write("Importing %s" % path) h = httplib2.Http() headers = { 'content-type' : 'application/dicom' } if len(sys.argv) == 6: username = sys.argv[4] password = sys.argv[5] # h.add_credentials(username, password) # This is a custom reimplementation of the # "Http.add_credentials()" method for Basic HTTP Access # Authentication (for some weird reason, this method does # not always work) # http://en.wikipedia.org/wiki/Basic_access_authentication headers['authorization'] = 'Basic ' + base64.b64encode(username + ':' + password) resp, content = h.request(URL, 'POST', body = content, headers = headers) if resp.status == 200: sys.stdout.write(" => success\n") success_count += 1 else: sys.stdout.write(" => failure (Is it a DICOM file?)\n") except: sys.stdout.write(" => unable to connect (Is Orthanc running? Is there a password?)\n") if os.path.isfile(sys.argv[3]): # Upload a single file UploadFile(sys.argv[3]) else: # Recursively upload a directory for root, dirs, files in os.walk(sys.argv[3]): for f in files: UploadFile(os.path.join(root, f)) if success_count == total_file_count: print("\nSummary: all %d DICOM file(s) have been imported successfully" % success_count) else: print("\nSummary: %d out of %d files have been imported successfully as DICOM instances" % (success_count, total_file_count))