view Resources/Samples/Python/ContinuousPatientAnonymization.py @ 3103:81b58b549845

back to using 'var' instead of 'let' since let is not supported by many old browsers. All variables declaration have been moved to the top of the function to better show that their scope is the function
author Alain Mazy <alain@mazy.be>
date Thu, 10 Jan 2019 10:51:36 +0100
parents 4e43e67f8ecf
children 94f4a18a79cc
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#!/usr/bin/python

# Orthanc - A Lightweight, RESTful DICOM Store
# Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
# Department, University Hospital of Liege, Belgium
# Copyright (C) 2017-2019 Osimis S.A., Belgium
#
# This program is free software: you can redistribute it and/or
# modify it under the terms of the GNU General Public License as
# published by the Free Software Foundation, either version 3 of the
# License, or (at your option) any later version.
# 
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
# General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <http://www.gnu.org/licenses/>.



import time
import sys
import RestToolbox
import md5


##
## Print help message
##

if len(sys.argv) != 3:
    print("""
Sample script that anonymizes patients in real-time. A patient gets
anonymized as soon as she gets stable (i.e. when no DICOM instance has
been received for this patient for a sufficient amount of time - cf.
the configuration option "StableAge").

Usage: %s [hostname] [HTTP port]
For instance: %s 127.0.0.1 8042
""" % (sys.argv[0], sys.argv[0]))
    exit(-1)

URL = 'http://%s:%d' % (sys.argv[1], int(sys.argv[2]))



##
## The following function is called whenever a patient gets stable
##

COUNT = 1

def AnonymizePatient(path):
    global URL
    global COUNT

    patient = RestToolbox.DoGet(URL + path)
    patientID = patient['MainDicomTags']['PatientID']

    # Ignore anonymized patients
    if not 'AnonymizedFrom' in patient:
        print('Patient with ID "%s" is stabilized: anonymizing it...' % (patientID))
        
        # The PatientID after anonymization is taken as the 8 first
        # characters from the MD5 hash of the original PatientID
        anonymizedID = md5.new(patientID).hexdigest()[:8]
        anonymizedName = 'Anonymized patient %d' % COUNT
        COUNT += 1

        RestToolbox.DoPost(URL + path + '/anonymize',
                           { 'Replace' : { 'PatientID' : anonymizedID,
                                           'PatientName' : anonymizedName } })

        # Delete the source patient after the anonymization
        RestToolbox.DoDelete(URL + change['Path'])



##
## Main loop that listens to the changes API.
## 

current = 0
while True:
    r = RestToolbox.DoGet(URL + '/changes', {
            'since' : current,
            'limit' : 4   # Retrieve at most 4 changes at once
            })

    for change in r['Changes']:
        if change['ChangeType'] == 'StablePatient':
            AnonymizePatient(change['Path'])

    current = r['Last']

    if r['Done']:
        print('Everything has been processed: Waiting...')
        time.sleep(1)