view Resources/Samples/Python/ArchiveStudiesInTimeRange.py @ 3103:81b58b549845

back to using 'var' instead of 'let' since let is not supported by many old browsers. All variables declaration have been moved to the top of the function to better show that their scope is the function
author Alain Mazy <alain@mazy.be>
date Thu, 10 Jan 2019 10:51:36 +0100
parents 4e43e67f8ecf
children 94f4a18a79cc
line wrap: on
line source

#!/usr/bin/python
# -*- coding: utf-8 -*-

# Orthanc - A Lightweight, RESTful DICOM Store
# Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
# Department, University Hospital of Liege, Belgium
# Copyright (C) 2017-2019 Osimis S.A., Belgium
#
# This program is free software: you can redistribute it and/or
# modify it under the terms of the GNU General Public License as
# published by the Free Software Foundation, either version 3 of the
# License, or (at your option) any later version.
# 
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
# General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <http://www.gnu.org/licenses/>.



import os
import os.path
import sys
import RestToolbox

def PrintHelp():
    print('Download ZIP archives for all the studies generated '
          'during a given time range (according to the StudyDate tag)\n')
    print('Usage: %s <URL> <StartDate> <EndDate> <TargetFolder>\n' % sys.argv[0])
    print('Example: %s http://127.0.0.1:8042/ 20150101 20151231 /tmp/\n' % sys.argv[0])
    exit(-1)

def CheckIsDate(date):
    if len(date) != 8 or not date.isdigit():
        print '"%s" is not a valid date!\n' % date
        exit(-1)


if len(sys.argv) != 5:
    PrintHelp()

URL = sys.argv[1]
START = sys.argv[2]
END = sys.argv[3]
TARGET = sys.argv[4]

CheckIsDate(START)
CheckIsDate(END)

def GetTag(tags, key):
    if key in tags:
        return tags[key]
    else:
        return 'No%s' % key

# Loop over the studies
for studyId in RestToolbox.DoGet('%s/studies' % URL):
    # Retrieve the DICOM tags of the current study
    study = RestToolbox.DoGet('%s/studies/%s' % (URL, studyId))['MainDicomTags']

    # Retrieve the DICOM tags of the parent patient of this study
    patient = RestToolbox.DoGet('%s/studies/%s/patient' % (URL, studyId))['MainDicomTags']

    # Check that the StudyDate tag lies within the given range
    studyDate = study['StudyDate'][:8]
    if studyDate >= START and studyDate <= END:
        # Create a filename
        filename = '%s - %s %s - %s.zip' % (GetTag(study, 'StudyDate'),
                                            GetTag(patient, 'PatientID'),
                                            GetTag(patient, 'PatientName'),
                                            GetTag(study, 'StudyDescription'))

        # Remove any non-ASCII character in the filename
        filename = filename.encode('ascii', errors = 'replace').translate(None, r"'\/:*?\"<>|!=").strip()

        # Download the ZIP archive of the study
        print('Downloading %s' % filename)
        zipContent = RestToolbox.DoGet('%s/studies/%s/archive' % (URL, studyId))

        # Write the ZIP archive at the proper location
        with open(os.path.join(TARGET, filename), 'wb') as f:
            f.write(zipContent)