Mercurial > hg > orthanc
view OrthancServer/Sources/Database/ResourcesContent.cpp @ 5318:68e15471b408
added ParsedDicomFile::InjectEmptyPixelData()
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Fri, 23 Jun 2023 18:01:55 +0200 |
parents | 8b6da4fdf9fe |
children | 48b8dae6dc77 |
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/** * Orthanc - A Lightweight, RESTful DICOM Store * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics * Department, University Hospital of Liege, Belgium * Copyright (C) 2017-2023 Osimis S.A., Belgium * Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium * * This program is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License as * published by the Free Software Foundation, either version 3 of the * License, or (at your option) any later version. * * This program is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program. If not, see <http://www.gnu.org/licenses/>. **/ #include "../PrecompiledHeadersServer.h" #include "ResourcesContent.h" #include "Compatibility/ISetResourcesContent.h" #include "../ServerToolbox.h" #include "../../../OrthancFramework/Sources/DicomFormat/DicomArray.h" #include "../../../OrthancFramework/Sources/OrthancException.h" #include "../../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" #include <cassert> namespace Orthanc { static void StoreMainDicomTagsInternal(ResourcesContent& target, int64_t resource, const DicomMap& tags) { DicomArray flattened(tags); for (size_t i = 0; i < flattened.GetSize(); i++) { const DicomElement& element = flattened.GetElement(i); const DicomTag& tag = element.GetTag(); const DicomValue& value = element.GetValue(); if (value.IsString()) { target.AddMainDicomTag(resource, tag, element.GetValue().GetContent()); } } } static void StoreIdentifiers(ResourcesContent& target, int64_t resource, ResourceType level, const DicomMap& map) { const DicomTag* tags; size_t size; ServerToolbox::LoadIdentifiers(tags, size, level); for (size_t i = 0; i < size; i++) { // The identifiers tags are a subset of the main DICOM tags assert(DicomMap::IsMainDicomTag(tags[i])); const DicomValue* value = map.TestAndGetValue(tags[i]); if (value != NULL && value->IsString()) { std::string s = ServerToolbox::NormalizeIdentifier(value->GetContent()); target.AddIdentifierTag(resource, tags[i], s); } } } void ResourcesContent::AddMetadata(int64_t resourceId, MetadataType metadata, const std::string& value) { if (isNewResource_) { metadata_.push_back(Metadata(resourceId, metadata, value)); } else { // This would require to handle the incrementation of revision // numbers in the database backend => only allow setting // metadata on new resources throw OrthancException(ErrorCode_NotImplemented); } } void ResourcesContent::AddResource(int64_t resource, ResourceType level, const DicomMap& dicomSummary) { StoreIdentifiers(*this, resource, level, dicomSummary); DicomMap tags; switch (level) { case ResourceType_Patient: dicomSummary.ExtractPatientInformation(tags); break; case ResourceType_Study: // Duplicate the patient tags at the study level (new in Orthanc 0.9.5 - db v6) dicomSummary.ExtractPatientInformation(tags); StoreMainDicomTagsInternal(*this, resource, tags); dicomSummary.ExtractStudyInformation(tags); break; case ResourceType_Series: dicomSummary.ExtractSeriesInformation(tags); break; case ResourceType_Instance: dicomSummary.ExtractInstanceInformation(tags); break; default: throw OrthancException(ErrorCode_InternalError); } StoreMainDicomTagsInternal(*this, resource, tags); // saves only leaf tags, not sequences } void ResourcesContent::Store(Compatibility::ISetResourcesContent& compatibility) const { for (std::list<TagValue>::const_iterator it = tags_.begin(); it != tags_.end(); ++it) { if (it->IsIdentifier()) { compatibility.SetIdentifierTag(it->GetResourceId(), it->GetTag(), it->GetValue()); } else { compatibility.SetMainDicomTag(it->GetResourceId(), it->GetTag(), it->GetValue()); } } for (std::list<Metadata>::const_iterator it = metadata_.begin(); it != metadata_.end(); ++it) { assert(isNewResource_); compatibility.SetMetadata(it->GetResourceId(), it->GetType(), it->GetValue(), 0 /* initial revision number */); } } }