Mercurial > hg > orthanc
view OrthancFramework/Resources/Patches/dcmtk-3.6.6.patch @ 5318:68e15471b408
added ParsedDicomFile::InjectEmptyPixelData()
author | Sebastien Jodogne <s.jodogne@gmail.com> |
---|---|
date | Fri, 23 Jun 2023 18:01:55 +0200 |
parents | 1b6b88f017b9 |
children |
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diff -urEb dcmtk-3.6.6.orig/CMake/GenerateDCMTKConfigure.cmake dcmtk-3.6.6/CMake/GenerateDCMTKConfigure.cmake --- dcmtk-3.6.6.orig/CMake/GenerateDCMTKConfigure.cmake 2021-01-26 08:51:48.815071681 +0100 +++ dcmtk-3.6.6/CMake/GenerateDCMTKConfigure.cmake 2021-01-26 08:52:06.331135995 +0100 @@ -169,6 +169,8 @@ endif() # Check the sizes of various types +if (NOT CMAKE_SYSTEM_NAME STREQUAL "Emscripten") + # This doesn't work for wasm, Orthanc defines the macros manually include (CheckTypeSize) CHECK_TYPE_SIZE("char" SIZEOF_CHAR) CHECK_TYPE_SIZE("double" SIZEOF_DOUBLE) @@ -177,6 +179,7 @@ CHECK_TYPE_SIZE("long" SIZEOF_LONG) CHECK_TYPE_SIZE("short" SIZEOF_SHORT) CHECK_TYPE_SIZE("void*" SIZEOF_VOID_P) +endif() # Check for include files, libraries, and functions include("${DCMTK_CMAKE_INCLUDE}CMake/dcmtkTryCompile.cmake") diff -urEb dcmtk-3.6.6.orig/dcmdata/include/dcmtk/dcmdata/dcdict.h dcmtk-3.6.6/dcmdata/include/dcmtk/dcmdata/dcdict.h --- dcmtk-3.6.6.orig/dcmdata/include/dcmtk/dcmdata/dcdict.h 2021-01-26 08:51:48.859071844 +0100 +++ dcmtk-3.6.6/dcmdata/include/dcmtk/dcmdata/dcdict.h 2021-01-26 08:52:06.331135995 +0100 @@ -152,6 +152,12 @@ /// returns an iterator to the end of the repeating tag dictionary DcmDictEntryListIterator repeatingEnd() { return repDict.end(); } + // Function by the Orthanc project to load a dictionary from a + // memory buffer, which is necessary in sandboxed + // environments. This is an adapted version of + // DcmDataDictionary::loadDictionary(). + OFBool loadFromMemory(const std::string& content, OFBool errorIfAbsent = OFTrue); + private: /** private undefined assignment operator diff -urEb dcmtk-3.6.6.orig/dcmdata/libsrc/dcdicdir.cc dcmtk-3.6.6/dcmdata/libsrc/dcdicdir.cc --- dcmtk-3.6.6.orig/dcmdata/libsrc/dcdicdir.cc 2021-01-26 08:51:48.863071859 +0100 +++ dcmtk-3.6.6/dcmdata/libsrc/dcdicdir.cc 2021-01-26 08:56:03.519887982 +0100 @@ -1032,7 +1032,14 @@ // insert Media Stored SOP Class UID insertMediaSOPUID(metainfo); - getDirFileFormat().validateMetaInfo(outxfer); + /** + * Patch for Orthanc: In DCMTK 3.6.6, the default value for the + * second argument changed from "EWM_fileformat" to + * "EWM_createNewMeta". This sets "MediaStorageSOPClassUID" + * (0002,0002) in meta-header to "1.2.276.0.7230010.3.1.0.1" + * instead of expected "1.2.840.10008.1.3.10". + **/ + getDirFileFormat().validateMetaInfo(outxfer, EWM_fileformat); { // it is important that the cache object is destroyed before the file is renamed! diff -urEb dcmtk-3.6.6.orig/dcmdata/libsrc/dcdict.cc dcmtk-3.6.6/dcmdata/libsrc/dcdict.cc --- dcmtk-3.6.6.orig/dcmdata/libsrc/dcdict.cc 2021-01-26 08:51:48.863071859 +0100 +++ dcmtk-3.6.6/dcmdata/libsrc/dcdict.cc 2021-01-26 08:52:06.331135995 +0100 @@ -900,3 +900,6 @@ wrlock().clear(); wrunlock(); } + + +#include "dcdict_orthanc.cc" diff -urEb dcmtk-3.6.6.orig/dcmdata/libsrc/dcpxitem.cc dcmtk-3.6.6/dcmdata/libsrc/dcpxitem.cc --- dcmtk-3.6.6.orig/dcmdata/libsrc/dcpxitem.cc 2021-01-26 08:51:48.863071859 +0100 +++ dcmtk-3.6.6/dcmdata/libsrc/dcpxitem.cc 2021-01-26 08:52:06.335136010 +0100 @@ -36,6 +36,9 @@ #include "dcmtk/dcmdata/dcostrma.h" /* for class DcmOutputStream */ #include "dcmtk/dcmdata/dcwcache.h" /* for class DcmWriteCache */ +#undef max +#include "dcmtk/ofstd/oflimits.h" + // ******************************** diff -urEb dcmtk-3.6.6.orig/oflog/include/dcmtk/oflog/thread/syncpub.h dcmtk-3.6.6/oflog/include/dcmtk/oflog/thread/syncpub.h --- dcmtk-3.6.6.orig/oflog/include/dcmtk/oflog/thread/syncpub.h 2021-01-26 08:51:48.847071800 +0100 +++ dcmtk-3.6.6/oflog/include/dcmtk/oflog/thread/syncpub.h 2021-01-26 08:52:06.335136010 +0100 @@ -63,7 +63,7 @@ DCMTK_LOG4CPLUS_INLINE_EXPORT Mutex::Mutex (Mutex::Type t) - : mtx (DCMTK_LOG4CPLUS_THREADED (new impl::Mutex (t)) + 0) + : mtx (DCMTK_LOG4CPLUS_THREADED (new impl::Mutex (t))) { } @@ -106,7 +106,7 @@ DCMTK_LOG4CPLUS_INLINE_EXPORT Semaphore::Semaphore (unsigned DCMTK_LOG4CPLUS_THREADED (max), unsigned DCMTK_LOG4CPLUS_THREADED (initial)) - : sem (DCMTK_LOG4CPLUS_THREADED (new impl::Semaphore (max, initial)) + 0) + : sem (DCMTK_LOG4CPLUS_THREADED (new impl::Semaphore (max, initial))) { } @@ -148,7 +148,7 @@ DCMTK_LOG4CPLUS_INLINE_EXPORT FairMutex::FairMutex () - : mtx (DCMTK_LOG4CPLUS_THREADED (new impl::FairMutex) + 0) + : mtx (DCMTK_LOG4CPLUS_THREADED (new impl::FairMutex)) { } @@ -190,7 +190,7 @@ DCMTK_LOG4CPLUS_INLINE_EXPORT ManualResetEvent::ManualResetEvent (bool DCMTK_LOG4CPLUS_THREADED (sig)) - : ev (DCMTK_LOG4CPLUS_THREADED (new impl::ManualResetEvent (sig)) + 0) + : ev (DCMTK_LOG4CPLUS_THREADED (new impl::ManualResetEvent (sig))) { } @@ -252,7 +252,7 @@ DCMTK_LOG4CPLUS_INLINE_EXPORT SharedMutex::SharedMutex () - : sm (DCMTK_LOG4CPLUS_THREADED (new impl::SharedMutex) + 0) + : sm (DCMTK_LOG4CPLUS_THREADED (new impl::SharedMutex)) { } diff -urEb dcmtk-3.6.6.orig/oflog/libsrc/oflog.cc dcmtk-3.6.6/oflog/libsrc/oflog.cc --- dcmtk-3.6.6.orig/oflog/libsrc/oflog.cc 2021-01-26 08:51:48.847071800 +0100 +++ dcmtk-3.6.6/oflog/libsrc/oflog.cc 2021-01-26 08:52:06.335136010 +0100 @@ -19,6 +19,10 @@ * */ +#if defined(_WIN32) +# include <winsock2.h> +#endif + #include "dcmtk/config/osconfig.h" /* make sure OS specific configuration is included first */ #include "dcmtk/oflog/oflog.h" diff -urEb dcmtk-3.6.6.orig/ofstd/include/dcmtk/ofstd/offile.h dcmtk-3.6.6/ofstd/include/dcmtk/ofstd/offile.h --- dcmtk-3.6.6.orig/ofstd/include/dcmtk/ofstd/offile.h 2021-01-26 08:51:48.863071859 +0100 +++ dcmtk-3.6.6/ofstd/include/dcmtk/ofstd/offile.h 2021-01-26 08:52:06.335136010 +0100 @@ -586,7 +586,7 @@ */ void setlinebuf() { -#if defined(_WIN32) || defined(__hpux) +#if defined(_WIN32) || defined(__hpux) || defined(__LSB_VERSION__) this->setvbuf(NULL, _IOLBF, 0); #else :: setlinebuf(file_); diff -urEb dcmtk-3.6.6.orig/config/tests/arith.cc dcmtk-3.6.6/config/tests/arith.cc --- dcmtk-3.6.6.orig/config/tests/arith.cc 2022-03-28 19:17:03.000000000 +0000 +++ dcmtk-3.6.6/config/tests/arith.cc 2022-03-28 19:18:12.000000000 +0000 @@ -40,7 +40,7 @@ #include <ieeefp.h> #endif -#ifdef __APPLE__ +#if defined(__APPLE__) && !defined(__aarch64__) // For controlling floating point exceptions on OS X. #include <xmmintrin.h> #endif @@ -340,7 +340,7 @@ #ifdef HAVE_WINDOWS_H _clearfp(); _controlfp( _controlfp(0,0) & ~_EM_INVALID, _MCW_EM ); -#elif defined(__APPLE__) +#elif defined(__APPLE__) && !defined(__aarch64__) _MM_SET_EXCEPTION_MASK( _MM_GET_EXCEPTION_MASK() & ~_MM_MASK_INVALID ); #elif defined(HAVE_FENV_H) && defined(HAVE_PROTOTYPE_FEENABLEEXCEPT) feenableexcept( FE_INVALID ); @@ -382,7 +382,7 @@ _controlfp( _controlfp(0,0) | _EM_INVALID, _MCW_EM ); #elif defined(HAVE_FENV_H) feclearexcept( FE_INVALID ); -#ifdef __APPLE__ +#if defined(__APPLE__) && !defined(__aarch64__) _MM_SET_EXCEPTION_MASK( _MM_GET_EXCEPTION_MASK() | _MM_MASK_INVALID ); #elif defined(HAVE_FENV_H) && defined(HAVE_PROTOTYPE_FEENABLEEXCEPT) fedisableexcept( FE_INVALID );