Mercurial > hg > orthanc
view Core/DicomFormat/DicomMap.cpp @ 1490:596927722403
support of --logdir by the internal logger
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Tue, 04 Aug 2015 14:04:48 +0200 |
parents | 1412ec22ee0b |
children | 9980875edc7c |
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/** * Orthanc - A Lightweight, RESTful DICOM Store * Copyright (C) 2012-2015 Sebastien Jodogne, Medical Physics * Department, University Hospital of Liege, Belgium * * This program is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License as * published by the Free Software Foundation, either version 3 of the * License, or (at your option) any later version. * * In addition, as a special exception, the copyright holders of this * program give permission to link the code of its release with the * OpenSSL project's "OpenSSL" library (or with modified versions of it * that use the same license as the "OpenSSL" library), and distribute * the linked executables. You must obey the GNU General Public License * in all respects for all of the code used other than "OpenSSL". If you * modify file(s) with this exception, you may extend this exception to * your version of the file(s), but you are not obligated to do so. If * you do not wish to do so, delete this exception statement from your * version. If you delete this exception statement from all source files * in the program, then also delete it here. * * This program is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program. If not, see <http://www.gnu.org/licenses/>. **/ #include "../PrecompiledHeaders.h" #include "DicomMap.h" #include <stdio.h> #include <memory> #include "DicomString.h" #include "DicomArray.h" #include "../OrthancException.h" namespace Orthanc { static DicomTag patientTags[] = { //DicomTag(0x0010, 0x1010), // PatientAge //DicomTag(0x0010, 0x1040) // PatientAddress DicomTag(0x0010, 0x0010), // PatientName DicomTag(0x0010, 0x0030), // PatientBirthDate DicomTag(0x0010, 0x0040), // PatientSex DicomTag(0x0010, 0x1000), // OtherPatientIDs DICOM_TAG_PATIENT_ID }; static DicomTag studyTags[] = { //DicomTag(0x0010, 0x1020), // PatientSize //DicomTag(0x0010, 0x1030) // PatientWeight DicomTag(0x0008, 0x0020), // StudyDate DicomTag(0x0008, 0x0030), // StudyTime DicomTag(0x0008, 0x1030), // StudyDescription DicomTag(0x0020, 0x0010), // StudyID DICOM_TAG_ACCESSION_NUMBER, DICOM_TAG_STUDY_INSTANCE_UID }; static DicomTag seriesTags[] = { //DicomTag(0x0010, 0x1080), // MilitaryRank DicomTag(0x0008, 0x0021), // SeriesDate DicomTag(0x0008, 0x0031), // SeriesTime DicomTag(0x0008, 0x0060), // Modality DicomTag(0x0008, 0x0070), // Manufacturer DicomTag(0x0008, 0x1010), // StationName DicomTag(0x0008, 0x103e), // SeriesDescription DicomTag(0x0018, 0x0015), // BodyPartExamined DicomTag(0x0018, 0x0024), // SequenceName DicomTag(0x0018, 0x1030), // ProtocolName DicomTag(0x0020, 0x0011), // SeriesNumber DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES, DICOM_TAG_IMAGES_IN_ACQUISITION, DICOM_TAG_NUMBER_OF_TEMPORAL_POSITIONS, DICOM_TAG_NUMBER_OF_SLICES, DICOM_TAG_NUMBER_OF_TIME_SLICES, DICOM_TAG_SERIES_INSTANCE_UID }; static DicomTag instanceTags[] = { DicomTag(0x0008, 0x0012), // InstanceCreationDate DicomTag(0x0008, 0x0013), // InstanceCreationTime DicomTag(0x0020, 0x0012), // AcquisitionNumber DICOM_TAG_IMAGE_INDEX, DICOM_TAG_INSTANCE_NUMBER, DICOM_TAG_NUMBER_OF_FRAMES, DICOM_TAG_TEMPORAL_POSITION_IDENTIFIER, DICOM_TAG_SOP_INSTANCE_UID }; void DicomMap::SetValue(uint16_t group, uint16_t element, DicomValue* value) { DicomTag tag(group, element); Map::iterator it = map_.find(tag); if (it != map_.end()) { delete it->second; it->second = value; } else { map_.insert(std::make_pair(tag, value)); } } void DicomMap::SetValue(DicomTag tag, DicomValue* value) { SetValue(tag.GetGroup(), tag.GetElement(), value); } void DicomMap::Clear() { for (Map::iterator it = map_.begin(); it != map_.end(); ++it) { delete it->second; } map_.clear(); } void DicomMap::ExtractTags(DicomMap& result, const DicomTag* tags, size_t count) const { result.Clear(); for (unsigned int i = 0; i < count; i++) { Map::const_iterator it = map_.find(tags[i]); if (it != map_.end()) { result.SetValue(it->first, it->second->Clone()); } } } void DicomMap::ExtractPatientInformation(DicomMap& result) const { ExtractTags(result, patientTags, sizeof(patientTags) / sizeof(DicomTag)); } void DicomMap::ExtractStudyInformation(DicomMap& result) const { ExtractTags(result, studyTags, sizeof(studyTags) / sizeof(DicomTag)); } void DicomMap::ExtractSeriesInformation(DicomMap& result) const { ExtractTags(result, seriesTags, sizeof(seriesTags) / sizeof(DicomTag)); } void DicomMap::ExtractInstanceInformation(DicomMap& result) const { ExtractTags(result, instanceTags, sizeof(instanceTags) / sizeof(DicomTag)); } DicomMap* DicomMap::Clone() const { std::auto_ptr<DicomMap> result(new DicomMap); for (Map::const_iterator it = map_.begin(); it != map_.end(); ++it) { result->map_.insert(std::make_pair(it->first, it->second->Clone())); } return result.release(); } void DicomMap::Assign(const DicomMap& other) { Clear(); for (Map::const_iterator it = other.map_.begin(); it != other.map_.end(); ++it) { map_.insert(std::make_pair(it->first, it->second->Clone())); } } const DicomValue& DicomMap::GetValue(const DicomTag& tag) const { const DicomValue* value = TestAndGetValue(tag); if (value) { return *value; } else { throw OrthancException(ErrorCode_InexistentTag); } } const DicomValue* DicomMap::TestAndGetValue(const DicomTag& tag) const { Map::const_iterator it = map_.find(tag); if (it == map_.end()) { return NULL; } else { return it->second; } } void DicomMap::Remove(const DicomTag& tag) { Map::iterator it = map_.find(tag); if (it != map_.end()) { delete it->second; map_.erase(it); } } static void SetupFindTemplate(DicomMap& result, const DicomTag* tags, size_t count) { result.Clear(); for (size_t i = 0; i < count; i++) { result.SetValue(tags[i], ""); } } void DicomMap::SetupFindPatientTemplate(DicomMap& result) { SetupFindTemplate(result, patientTags, sizeof(patientTags) / sizeof(DicomTag)); } void DicomMap::SetupFindStudyTemplate(DicomMap& result) { SetupFindTemplate(result, studyTags, sizeof(studyTags) / sizeof(DicomTag)); result.SetValue(DICOM_TAG_ACCESSION_NUMBER, ""); result.SetValue(DICOM_TAG_PATIENT_ID, ""); } void DicomMap::SetupFindSeriesTemplate(DicomMap& result) { SetupFindTemplate(result, seriesTags, sizeof(seriesTags) / sizeof(DicomTag)); result.SetValue(DICOM_TAG_ACCESSION_NUMBER, ""); result.SetValue(DICOM_TAG_PATIENT_ID, ""); result.SetValue(DICOM_TAG_STUDY_INSTANCE_UID, ""); // These tags are considered as "main" by Orthanc, but are not in the Series module result.Remove(DicomTag(0x0008, 0x0070)); // Manufacturer result.Remove(DicomTag(0x0008, 0x1010)); // Station name result.Remove(DicomTag(0x0018, 0x0024)); // Sequence name result.Remove(DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES); result.Remove(DICOM_TAG_IMAGES_IN_ACQUISITION); result.Remove(DICOM_TAG_NUMBER_OF_SLICES); result.Remove(DICOM_TAG_NUMBER_OF_TEMPORAL_POSITIONS); result.Remove(DICOM_TAG_NUMBER_OF_TIME_SLICES); } void DicomMap::SetupFindInstanceTemplate(DicomMap& result) { SetupFindTemplate(result, instanceTags, sizeof(instanceTags) / sizeof(DicomTag)); result.SetValue(DICOM_TAG_ACCESSION_NUMBER, ""); result.SetValue(DICOM_TAG_PATIENT_ID, ""); result.SetValue(DICOM_TAG_STUDY_INSTANCE_UID, ""); result.SetValue(DICOM_TAG_SERIES_INSTANCE_UID, ""); } void DicomMap::CopyTagIfExists(const DicomMap& source, const DicomTag& tag) { if (source.HasTag(tag)) { SetValue(tag, source.GetValue(tag)); } } bool DicomMap::IsMainDicomTag(const DicomTag& tag, ResourceType level) { DicomTag *tags = NULL; size_t size; switch (level) { case ResourceType_Patient: tags = patientTags; size = sizeof(patientTags) / sizeof(DicomTag); break; case ResourceType_Study: tags = studyTags; size = sizeof(studyTags) / sizeof(DicomTag); break; case ResourceType_Series: tags = seriesTags; size = sizeof(seriesTags) / sizeof(DicomTag); break; case ResourceType_Instance: tags = instanceTags; size = sizeof(instanceTags) / sizeof(DicomTag); break; default: throw OrthancException(ErrorCode_ParameterOutOfRange); } for (size_t i = 0; i < size; i++) { if (tags[i] == tag) { return true; } } return false; } bool DicomMap::IsMainDicomTag(const DicomTag& tag) { return (IsMainDicomTag(tag, ResourceType_Patient) || IsMainDicomTag(tag, ResourceType_Study) || IsMainDicomTag(tag, ResourceType_Series) || IsMainDicomTag(tag, ResourceType_Instance)); } void DicomMap::GetMainDicomTagsInternal(std::set<DicomTag>& result, ResourceType level) { DicomTag *tags = NULL; size_t size; switch (level) { case ResourceType_Patient: tags = patientTags; size = sizeof(patientTags) / sizeof(DicomTag); break; case ResourceType_Study: tags = studyTags; size = sizeof(studyTags) / sizeof(DicomTag); break; case ResourceType_Series: tags = seriesTags; size = sizeof(seriesTags) / sizeof(DicomTag); break; case ResourceType_Instance: tags = instanceTags; size = sizeof(instanceTags) / sizeof(DicomTag); break; default: throw OrthancException(ErrorCode_ParameterOutOfRange); } for (size_t i = 0; i < size; i++) { result.insert(tags[i]); } } void DicomMap::GetMainDicomTags(std::set<DicomTag>& result, ResourceType level) { result.clear(); GetMainDicomTagsInternal(result, level); } void DicomMap::GetMainDicomTags(std::set<DicomTag>& result) { result.clear(); GetMainDicomTagsInternal(result, ResourceType_Patient); GetMainDicomTagsInternal(result, ResourceType_Study); GetMainDicomTagsInternal(result, ResourceType_Series); GetMainDicomTagsInternal(result, ResourceType_Instance); } void DicomMap::Print(FILE* fp) const { DicomArray a(*this); a.Print(fp); } void DicomMap::GetTags(std::set<DicomTag>& tags) const { tags.clear(); for (Map::const_iterator it = map_.begin(); it != map_.end(); ++it) { tags.insert(it->first); } } }