Mercurial > hg > orthanc
view PalantirServer/DicomIntegerPixelAccessor.cpp @ 0:3959d33612cc
initial commit
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Thu, 19 Jul 2012 14:32:22 +0200 |
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children | 67a6978503b7 |
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/** * Palantir - A Lightweight, RESTful DICOM Store * Copyright (C) 2012 Medical Physics Department, CHU of Liege, * Belgium * * This program is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License as * published by the Free Software Foundation, either version 3 of the * License, or (at your option) any later version. * * This program is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program. If not, see <http://www.gnu.org/licenses/>. **/ #include "DicomIntegerPixelAccessor.h" #include "../Core/PalantirException.h" #include "FromDcmtkBridge.h" #include <boost/lexical_cast.hpp> namespace Palantir { DicomIntegerPixelAccessor::DicomIntegerPixelAccessor(const DicomMap& values, const void* pixelData, size_t size) : pixelData_(pixelData), size_(size) { unsigned int bitsAllocated; unsigned int bitsStored; unsigned int highBit; unsigned int pixelRepresentation; try { width_ = boost::lexical_cast<unsigned int>(FromDcmtkBridge::GetValue(values, "Columns").AsString()); height_ = boost::lexical_cast<unsigned int>(FromDcmtkBridge::GetValue(values, "Rows").AsString()); samplesPerPixel_ = boost::lexical_cast<unsigned int>(FromDcmtkBridge::GetValue(values, "SamplesPerPixel").AsString()); bitsAllocated = boost::lexical_cast<unsigned int>(FromDcmtkBridge::GetValue(values, "BitsAllocated").AsString()); bitsStored = boost::lexical_cast<unsigned int>(FromDcmtkBridge::GetValue(values, "BitsStored").AsString()); highBit = boost::lexical_cast<unsigned int>(FromDcmtkBridge::GetValue(values, "HighBit").AsString()); pixelRepresentation = boost::lexical_cast<unsigned int>(FromDcmtkBridge::GetValue(values, "PixelRepresentation").AsString()); } catch (boost::bad_lexical_cast) { throw PalantirException(ErrorCode_NotImplemented); } if (bitsAllocated != 8 && bitsAllocated != 16 && bitsAllocated != 24 && bitsAllocated != 32) { throw PalantirException(ErrorCode_NotImplemented); } if (bitsAllocated > 32 || bitsStored >= 32) { // Not available, as the accessor internally uses int32_t values throw PalantirException(ErrorCode_NotImplemented); } if (samplesPerPixel_ != 1) { throw PalantirException(ErrorCode_NotImplemented); } if (width_ * height_ * bitsAllocated / 8 != size) { throw PalantirException(ErrorCode_NotImplemented); } printf("%d %d %d %d %d %d %d\n", width_, height_, samplesPerPixel_, bitsAllocated, bitsStored, highBit, pixelRepresentation); bytesPerPixel_ = bitsAllocated / 8; shift_ = highBit + 1 - bitsStored; if (pixelRepresentation) { mask_ = (1 << (bitsStored - 1)) - 1; signMask_ = (1 << (bitsStored - 1)); } else { mask_ = (1 << bitsStored) - 1; signMask_ = 0; } } void DicomIntegerPixelAccessor::GetExtremeValues(int32_t& min, int32_t& max) const { if (height_ == 0 || width_ == 0) { min = max = 0; return; } min = std::numeric_limits<int32_t>::max(); max = std::numeric_limits<int32_t>::min(); for (unsigned int y = 0; y < height_; y++) { for (unsigned int x = 0; x < width_; x++) { int32_t v = GetValue(x, y); if (v < min) min = v; if (v > max) max = v; } } } int32_t DicomIntegerPixelAccessor::GetValue(unsigned int x, unsigned int y) const { assert(x < width_ && y < height_); const uint8_t* pixel = reinterpret_cast<const uint8_t*>(pixelData_) + (y * width_ + x) * bytesPerPixel_; int32_t v; v = pixel[0]; if (bytesPerPixel_ >= 2) v = v + (static_cast<int32_t>(pixel[1]) << 8); if (bytesPerPixel_ >= 3) v = v + (static_cast<int32_t>(pixel[2]) << 16); if (bytesPerPixel_ >= 4) v = v + (static_cast<int32_t>(pixel[3]) << 24); v = (v >> shift_) & mask_; if (v & signMask_) { // Signed value: Not implemented yet //throw PalantirException(ErrorCode_NotImplemented); v = 0; } return v; } }