Mercurial > hg > orthanc
view Plugins/Engine/OrthancPlugins.cpp @ 1157:22ef457b7985 db-changes
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author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Tue, 16 Sep 2014 14:22:22 +0200 |
parents | 0479d02c6778 |
children | 1ea4094d077c |
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/** * Orthanc - A Lightweight, RESTful DICOM Store * Copyright (C) 2012-2014 Medical Physics Department, CHU of Liege, * Belgium * * This program is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License as * published by the Free Software Foundation, either version 3 of the * License, or (at your option) any later version. * * In addition, as a special exception, the copyright holders of this * program give permission to link the code of its release with the * OpenSSL project's "OpenSSL" library (or with modified versions of it * that use the same license as the "OpenSSL" library), and distribute * the linked executables. You must obey the GNU General Public License * in all respects for all of the code used other than "OpenSSL". If you * modify file(s) with this exception, you may extend this exception to * your version of the file(s), but you are not obligated to do so. If * you do not wish to do so, delete this exception statement from your * version. If you delete this exception statement from all source files * in the program, then also delete it here. * * This program is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program. If not, see <http://www.gnu.org/licenses/>. **/ #include "OrthancPlugins.h" #include "../../Core/ChunkedBuffer.h" #include "../../Core/OrthancException.h" #include "../../Core/Toolbox.h" #include "../../Core/HttpServer/HttpOutput.h" #include "../../Core/ImageFormats/PngWriter.h" #include "../../OrthancServer/ServerToolbox.h" #include "../../OrthancServer/OrthancInitialization.h" #include <boost/regex.hpp> #include <glog/logging.h> namespace Orthanc { namespace { // Anonymous namespace to avoid clashes between compilation modules class StringHttpOutput : public IHttpOutputStream { private: ChunkedBuffer buffer_; public: void GetOutput(std::string& output) { buffer_.Flatten(output); } virtual void OnHttpStatusReceived(HttpStatus status) { if (status != HttpStatus_200_Ok) { throw OrthancException(ErrorCode_BadRequest); } } virtual void Send(bool isHeader, const void* buffer, size_t length) { if (!isHeader) { buffer_.AddChunk(reinterpret_cast<const char*>(buffer), length); } } }; } struct OrthancPlugins::PImpl { typedef std::pair<boost::regex*, OrthancPluginRestCallback> RestCallback; typedef std::list<RestCallback> RestCallbacks; typedef std::list<OrthancPluginOnStoredInstanceCallback> OnStoredCallbacks; ServerContext& context_; RestCallbacks restCallbacks_; OrthancRestApi* restApi_; OnStoredCallbacks onStoredCallbacks_; bool hasStorageArea_; _OrthancPluginRegisterStorageArea storageArea_; PImpl(ServerContext& context) : context_(context), restApi_(NULL), hasStorageArea_(false) { memset(&storageArea_, 0, sizeof(storageArea_)); } }; static char* CopyString(const std::string& str) { char *result = reinterpret_cast<char*>(malloc(str.size() + 1)); if (result == NULL) { throw OrthancException(ErrorCode_NotEnoughMemory); } if (str.size() == 0) { result[0] = '\0'; } else { memcpy(result, &str[0], str.size() + 1); } return result; } OrthancPlugins::OrthancPlugins(ServerContext& context) { pimpl_.reset(new PImpl(context)); } OrthancPlugins::~OrthancPlugins() { for (PImpl::RestCallbacks::iterator it = pimpl_->restCallbacks_.begin(); it != pimpl_->restCallbacks_.end(); ++it) { // Delete the regular expression associated with this callback delete it->first; } } static void ArgumentsToPlugin(std::vector<const char*>& keys, std::vector<const char*>& values, const HttpHandler::Arguments& arguments) { keys.resize(arguments.size()); values.resize(arguments.size()); size_t pos = 0; for (HttpHandler::Arguments::const_iterator it = arguments.begin(); it != arguments.end(); ++it) { keys[pos] = it->first.c_str(); values[pos] = it->second.c_str(); pos++; } } bool OrthancPlugins::Handle(HttpOutput& output, HttpMethod method, const UriComponents& uri, const Arguments& headers, const Arguments& getArguments, const std::string& postData) { std::string flatUri = Toolbox::FlattenUri(uri); OrthancPluginRestCallback callback = NULL; std::vector<std::string> groups; std::vector<const char*> cgroups; // Loop over the callbacks registered by the plugins bool found = false; for (PImpl::RestCallbacks::const_iterator it = pimpl_->restCallbacks_.begin(); it != pimpl_->restCallbacks_.end() && !found; ++it) { // Check whether the regular expression associated to this // callback matches the URI boost::cmatch what; if (boost::regex_match(flatUri.c_str(), what, *(it->first))) { callback = it->second; // Extract the value of the free parameters of the regular expression if (what.size() > 1) { groups.resize(what.size() - 1); cgroups.resize(what.size() - 1); for (size_t i = 1; i < what.size(); i++) { groups[i - 1] = what[i]; cgroups[i - 1] = groups[i - 1].c_str(); } } found = true; } } if (!found) { return false; } LOG(INFO) << "Delegating HTTP request to plugin for URI: " << flatUri; std::vector<const char*> getKeys, getValues, headersKeys, headersValues; OrthancPluginHttpRequest request; memset(&request, 0, sizeof(OrthancPluginHttpRequest)); ArgumentsToPlugin(headersKeys, headersValues, headers); switch (method) { case HttpMethod_Get: request.method = OrthancPluginHttpMethod_Get; ArgumentsToPlugin(getKeys, getValues, getArguments); break; case HttpMethod_Post: request.method = OrthancPluginHttpMethod_Post; break; case HttpMethod_Delete: request.method = OrthancPluginHttpMethod_Delete; break; case HttpMethod_Put: request.method = OrthancPluginHttpMethod_Put; break; default: throw OrthancException(ErrorCode_InternalError); } request.groups = (cgroups.size() ? &cgroups[0] : NULL); request.groupsCount = cgroups.size(); request.getCount = getArguments.size(); request.body = (postData.size() ? &postData[0] : NULL); request.bodySize = postData.size(); request.headersCount = headers.size(); if (getArguments.size() > 0) { request.getKeys = &getKeys[0]; request.getValues = &getValues[0]; } if (headers.size() > 0) { request.headersKeys = &headersKeys[0]; request.headersValues = &headersValues[0]; } assert(callback != NULL); int32_t error = callback(reinterpret_cast<OrthancPluginRestOutput*>(&output), flatUri.c_str(), &request); if (error < 0) { LOG(ERROR) << "Plugin callback failed with error code " << error; return false; } else { if (error > 0) { LOG(WARNING) << "Plugin callback finished with warning code " << error; } return true; } } void OrthancPlugins::SignalStoredInstance(DicomInstanceToStore& instance, const std::string& instanceId) { for (PImpl::OnStoredCallbacks::const_iterator callback = pimpl_->onStoredCallbacks_.begin(); callback != pimpl_->onStoredCallbacks_.end(); ++callback) { (*callback) (reinterpret_cast<OrthancPluginDicomInstance*>(&instance), instanceId.c_str()); } } static void CopyToMemoryBuffer(OrthancPluginMemoryBuffer& target, const void* data, size_t size) { target.size = size; if (size == 0) { target.data = NULL; } else { target.data = malloc(size); if (target.data != NULL) { memcpy(target.data, data, size); } else { throw OrthancException(ErrorCode_NotEnoughMemory); } } } static void CopyToMemoryBuffer(OrthancPluginMemoryBuffer& target, const std::string& str) { if (str.size() == 0) { target.size = 0; target.data = NULL; } else { CopyToMemoryBuffer(target, str.c_str(), str.size()); } } void OrthancPlugins::RegisterRestCallback(const void* parameters) { const _OrthancPluginRestCallback& p = *reinterpret_cast<const _OrthancPluginRestCallback*>(parameters); LOG(INFO) << "Plugin has registered a REST callback on: " << p.pathRegularExpression; pimpl_->restCallbacks_.push_back(std::make_pair(new boost::regex(p.pathRegularExpression), p.callback)); } void OrthancPlugins::RegisterOnStoredInstanceCallback(const void* parameters) { const _OrthancPluginOnStoredInstanceCallback& p = *reinterpret_cast<const _OrthancPluginOnStoredInstanceCallback*>(parameters); LOG(INFO) << "Plugin has registered an OnStoredInstance callback"; pimpl_->onStoredCallbacks_.push_back(p.callback); } void OrthancPlugins::AnswerBuffer(const void* parameters) { const _OrthancPluginAnswerBuffer& p = *reinterpret_cast<const _OrthancPluginAnswerBuffer*>(parameters); HttpOutput* translatedOutput = reinterpret_cast<HttpOutput*>(p.output); translatedOutput->SetContentType(p.mimeType); translatedOutput->SendBody(p.answer, p.answerSize); } void OrthancPlugins::Redirect(const void* parameters) { const _OrthancPluginOutputPlusArgument& p = *reinterpret_cast<const _OrthancPluginOutputPlusArgument*>(parameters); HttpOutput* translatedOutput = reinterpret_cast<HttpOutput*>(p.output); translatedOutput->Redirect(p.argument); } void OrthancPlugins::SendHttpStatusCode(const void* parameters) { const _OrthancPluginSendHttpStatusCode& p = *reinterpret_cast<const _OrthancPluginSendHttpStatusCode*>(parameters); HttpOutput* translatedOutput = reinterpret_cast<HttpOutput*>(p.output); translatedOutput->SendStatus(static_cast<HttpStatus>(p.status)); } void OrthancPlugins::SendUnauthorized(const void* parameters) { const _OrthancPluginOutputPlusArgument& p = *reinterpret_cast<const _OrthancPluginOutputPlusArgument*>(parameters); HttpOutput* translatedOutput = reinterpret_cast<HttpOutput*>(p.output); translatedOutput->SendUnauthorized(p.argument); } void OrthancPlugins::SendMethodNotAllowed(const void* parameters) { const _OrthancPluginOutputPlusArgument& p = *reinterpret_cast<const _OrthancPluginOutputPlusArgument*>(parameters); HttpOutput* translatedOutput = reinterpret_cast<HttpOutput*>(p.output); translatedOutput->SendMethodNotAllowed(p.argument); } void OrthancPlugins::SetCookie(const void* parameters) { const _OrthancPluginSetHttpHeader& p = *reinterpret_cast<const _OrthancPluginSetHttpHeader*>(parameters); HttpOutput* translatedOutput = reinterpret_cast<HttpOutput*>(p.output); translatedOutput->SetCookie(p.key, p.value); } void OrthancPlugins::SetHttpHeader(const void* parameters) { const _OrthancPluginSetHttpHeader& p = *reinterpret_cast<const _OrthancPluginSetHttpHeader*>(parameters); HttpOutput* translatedOutput = reinterpret_cast<HttpOutput*>(p.output); translatedOutput->AddHeader(p.key, p.value); } void OrthancPlugins::CompressAndAnswerPngImage(const void* parameters) { const _OrthancPluginCompressAndAnswerPngImage& p = *reinterpret_cast<const _OrthancPluginCompressAndAnswerPngImage*>(parameters); HttpOutput* translatedOutput = reinterpret_cast<HttpOutput*>(p.output); PixelFormat format; switch (p.format) { case OrthancPluginPixelFormat_Grayscale8: format = PixelFormat_Grayscale8; break; case OrthancPluginPixelFormat_Grayscale16: format = PixelFormat_Grayscale16; break; case OrthancPluginPixelFormat_SignedGrayscale16: format = PixelFormat_SignedGrayscale16; break; case OrthancPluginPixelFormat_RGB24: format = PixelFormat_RGB24; break; case OrthancPluginPixelFormat_RGBA32: format = PixelFormat_RGBA32; break; default: throw OrthancException(ErrorCode_ParameterOutOfRange); } ImageAccessor accessor; accessor.AssignReadOnly(format, p.width, p.height, p.pitch, p.buffer); PngWriter writer; std::string png; writer.WriteToMemory(png, accessor); translatedOutput->SetContentType("image/png"); translatedOutput->SendBody(png); } void OrthancPlugins::GetDicomForInstance(const void* parameters) { const _OrthancPluginGetDicomForInstance& p = *reinterpret_cast<const _OrthancPluginGetDicomForInstance*>(parameters); std::string dicom; pimpl_->context_.ReadFile(dicom, p.instanceId, FileContentType_Dicom); CopyToMemoryBuffer(*p.target, dicom); } void OrthancPlugins::RestApiGet(const void* parameters) { const _OrthancPluginRestApiGet& p = *reinterpret_cast<const _OrthancPluginRestApiGet*>(parameters); HttpHandler::Arguments headers; // No HTTP header std::string body; // No body for a GET request UriComponents uri; HttpHandler::Arguments getArguments; HttpHandler::ParseGetQuery(uri, getArguments, p.uri); StringHttpOutput stream; HttpOutput http(stream, false /* no keep alive */); LOG(INFO) << "Plugin making REST GET call on URI " << p.uri; if (pimpl_->restApi_ != NULL && pimpl_->restApi_->Handle(http, HttpMethod_Get, uri, headers, getArguments, body)) { std::string result; stream.GetOutput(result); CopyToMemoryBuffer(*p.target, result); } else { throw OrthancException(ErrorCode_BadRequest); } } void OrthancPlugins::RestApiPostPut(bool isPost, const void* parameters) { const _OrthancPluginRestApiPostPut& p = *reinterpret_cast<const _OrthancPluginRestApiPostPut*>(parameters); HttpHandler::Arguments headers; // No HTTP header HttpHandler::Arguments getArguments; // No GET argument for POST/PUT UriComponents uri; Toolbox::SplitUriComponents(uri, p.uri); // TODO Avoid unecessary memcpy std::string body(p.body, p.bodySize); StringHttpOutput stream; HttpOutput http(stream, false /* no keep alive */); HttpMethod method = (isPost ? HttpMethod_Post : HttpMethod_Put); LOG(INFO) << "Plugin making REST " << EnumerationToString(method) << " call on URI " << p.uri; if (pimpl_->restApi_ != NULL && pimpl_->restApi_->Handle(http, method, uri, headers, getArguments, body)) { std::string result; stream.GetOutput(result); CopyToMemoryBuffer(*p.target, result); } else { throw OrthancException(ErrorCode_BadRequest); } } void OrthancPlugins::RestApiDelete(const void* parameters) { // The "parameters" point to the URI UriComponents uri; Toolbox::SplitUriComponents(uri, reinterpret_cast<const char*>(parameters)); HttpHandler::Arguments headers; // No HTTP header HttpHandler::Arguments getArguments; // No GET argument for POST/PUT std::string body; // No body for DELETE StringHttpOutput stream; HttpOutput http(stream, false /* no keep alive */); LOG(INFO) << "Plugin making REST DELETE call on URI " << reinterpret_cast<const char*>(parameters); if (pimpl_->restApi_ == NULL || !pimpl_->restApi_->Handle(http, HttpMethod_Delete, uri, headers, getArguments, body)) { throw OrthancException(ErrorCode_BadRequest); } } void OrthancPlugins::LookupResource(_OrthancPluginService service, const void* parameters) { const _OrthancPluginRetrieveDynamicString& p = *reinterpret_cast<const _OrthancPluginRetrieveDynamicString*>(parameters); /** * The enumeration below only uses the tags that are indexed in * the Orthanc database. It reflects the * "CandidateResources::ApplyFilter()" method of the * "OrthancFindRequestHandler" class. **/ DicomTag tag(0, 0); ResourceType level; switch (service) { case _OrthancPluginService_LookupPatient: tag = DICOM_TAG_PATIENT_ID; level = ResourceType_Patient; break; case _OrthancPluginService_LookupStudy: tag = DICOM_TAG_STUDY_INSTANCE_UID; level = ResourceType_Study; break; case _OrthancPluginService_LookupStudyWithAccessionNumber: tag = DICOM_TAG_ACCESSION_NUMBER; level = ResourceType_Study; break; case _OrthancPluginService_LookupSeries: tag = DICOM_TAG_SERIES_INSTANCE_UID; level = ResourceType_Series; break; case _OrthancPluginService_LookupInstance: tag = DICOM_TAG_SOP_INSTANCE_UID; level = ResourceType_Instance; break; default: throw OrthancException(ErrorCode_InternalError); } std::list<std::string> result; pimpl_->context_.GetIndex().LookupTagValue(result, tag, p.argument, level); if (result.size() == 1) { *p.result = CopyString(result.front()); } else { throw OrthancException(ErrorCode_UnknownResource); } } static void AccessInstanceMetadataInternal(bool checkExistence, const _OrthancPluginAccessDicomInstance& params, const DicomInstanceToStore& instance) { MetadataType metadata; try { metadata = StringToMetadata(params.key); } catch (OrthancException&) { // Unknown metadata if (checkExistence) { *params.resultInt64 = -1; } else { *params.resultString = NULL; } return; } ServerIndex::MetadataMap::const_iterator it = instance.GetMetadata().find(std::make_pair(ResourceType_Instance, metadata)); if (checkExistence) { if (it != instance.GetMetadata().end()) { *params.resultInt64 = 1; } else { *params.resultInt64 = 0; } } else { if (it != instance.GetMetadata().end()) { *params.resultString = it->second.c_str(); } else { // Error: Missing metadata *params.resultString = NULL; } } } static void AccessDicomInstance(_OrthancPluginService service, const void* parameters) { const _OrthancPluginAccessDicomInstance& p = *reinterpret_cast<const _OrthancPluginAccessDicomInstance*>(parameters); DicomInstanceToStore& instance = *reinterpret_cast<DicomInstanceToStore*>(p.instance); switch (service) { case _OrthancPluginService_GetInstanceRemoteAet: *p.resultString = instance.GetRemoteAet().c_str(); return; case _OrthancPluginService_GetInstanceSize: *p.resultInt64 = instance.GetBufferSize(); return; case _OrthancPluginService_GetInstanceData: *p.resultString = instance.GetBufferData(); return; case _OrthancPluginService_HasInstanceMetadata: AccessInstanceMetadataInternal(true, p, instance); return; case _OrthancPluginService_GetInstanceMetadata: AccessInstanceMetadataInternal(false, p, instance); return; case _OrthancPluginService_GetInstanceJson: case _OrthancPluginService_GetInstanceSimplifiedJson: { Json::StyledWriter writer; std::string s; if (service == _OrthancPluginService_GetInstanceJson) { s = writer.write(instance.GetJson()); } else { Json::Value simplified; SimplifyTags(simplified, instance.GetJson()); s = writer.write(simplified); } *p.resultStringToFree = CopyString(s); return; } default: throw OrthancException(ErrorCode_InternalError); } } bool OrthancPlugins::InvokeService(_OrthancPluginService service, const void* parameters) { switch (service) { case _OrthancPluginService_GetOrthancPath: { std::string s = Toolbox::GetPathToExecutable(); *reinterpret_cast<const _OrthancPluginRetrieveDynamicString*>(parameters)->result = CopyString(s); return true; } case _OrthancPluginService_GetOrthancDirectory: { std::string s = Toolbox::GetDirectoryOfExecutable(); *reinterpret_cast<const _OrthancPluginRetrieveDynamicString*>(parameters)->result = CopyString(s); return true; } case _OrthancPluginService_GetConfigurationPath: { *reinterpret_cast<const _OrthancPluginRetrieveDynamicString*>(parameters)->result = CopyString(Configuration::GetConfigurationAbsolutePath()); return true; } case _OrthancPluginService_RegisterRestCallback: RegisterRestCallback(parameters); return true; case _OrthancPluginService_RegisterOnStoredInstanceCallback: RegisterOnStoredInstanceCallback(parameters); return true; case _OrthancPluginService_AnswerBuffer: AnswerBuffer(parameters); return true; case _OrthancPluginService_CompressAndAnswerPngImage: CompressAndAnswerPngImage(parameters); return true; case _OrthancPluginService_GetDicomForInstance: GetDicomForInstance(parameters); return true; case _OrthancPluginService_RestApiGet: RestApiGet(parameters); return true; case _OrthancPluginService_RestApiPost: RestApiPostPut(true, parameters); return true; case _OrthancPluginService_RestApiDelete: RestApiDelete(parameters); return true; case _OrthancPluginService_RestApiPut: RestApiPostPut(false, parameters); return true; case _OrthancPluginService_Redirect: Redirect(parameters); return true; case _OrthancPluginService_SendUnauthorized: SendUnauthorized(parameters); return true; case _OrthancPluginService_SendMethodNotAllowed: SendMethodNotAllowed(parameters); return true; case _OrthancPluginService_SendHttpStatusCode: SendHttpStatusCode(parameters); return true; case _OrthancPluginService_SetCookie: SetCookie(parameters); return true; case _OrthancPluginService_SetHttpHeader: SetHttpHeader(parameters); return true; case _OrthancPluginService_LookupPatient: case _OrthancPluginService_LookupStudy: case _OrthancPluginService_LookupStudyWithAccessionNumber: case _OrthancPluginService_LookupSeries: case _OrthancPluginService_LookupInstance: LookupResource(service, parameters); return true; case _OrthancPluginService_GetInstanceRemoteAet: case _OrthancPluginService_GetInstanceSize: case _OrthancPluginService_GetInstanceData: case _OrthancPluginService_GetInstanceJson: case _OrthancPluginService_GetInstanceSimplifiedJson: case _OrthancPluginService_HasInstanceMetadata: case _OrthancPluginService_GetInstanceMetadata: AccessDicomInstance(service, parameters); return true; case _OrthancPluginService_RegisterStorageArea: { const _OrthancPluginRegisterStorageArea& p = *reinterpret_cast<const _OrthancPluginRegisterStorageArea*>(parameters); pimpl_->storageArea_ = p; pimpl_->hasStorageArea_ = true; return true; } default: return false; } } void OrthancPlugins::SetOrthancRestApi(OrthancRestApi& restApi) { pimpl_->restApi_ = &restApi; } bool OrthancPlugins::HasStorageArea() const { return pimpl_->hasStorageArea_; } namespace { class PluginStorageArea : public IStorageArea { private: _OrthancPluginRegisterStorageArea params_; void Free(void* buffer) const { if (buffer != NULL) { params_.free_(buffer); } } OrthancPluginContentType Convert(FileContentType type) const { switch (type) { case FileContentType_Dicom: return OrthancPluginContentType_Dicom; case FileContentType_DicomAsJson: return OrthancPluginContentType_DicomAsJson; default: return OrthancPluginContentType_Unknown; } } public: PluginStorageArea(const _OrthancPluginRegisterStorageArea& params) : params_(params) { } virtual void Create(const std::string& uuid, const void* content, size_t size, FileContentType type) { if (params_.create_(uuid.c_str(), content, size, Convert(type)) != 0) { throw OrthancException(ErrorCode_Plugin); } } virtual void Read(std::string& content, const std::string& uuid, FileContentType type) const { void* buffer = NULL; int64_t size = 0; if (params_.read_(&buffer, &size, uuid.c_str(), Convert(type)) != 0) { throw OrthancException(ErrorCode_Plugin); } try { content.resize(size); } catch (OrthancException&) { Free(buffer); throw; } if (size > 0) { memcpy(&content[0], buffer, size); } Free(buffer); } virtual void Remove(const std::string& uuid, FileContentType type) { if (params_.remove_(uuid.c_str(), Convert(type)) != 0) { throw OrthancException(ErrorCode_Plugin); } } }; } IStorageArea* OrthancPlugins::GetStorageArea() { if (!HasStorageArea()) { throw OrthancException(ErrorCode_BadSequenceOfCalls); } return new PluginStorageArea(pimpl_->storageArea_);; } }