Mercurial > hg > orthanc
diff OrthancServer/Resources/Samples/Python/ContinuousPatientAnonymization.py @ 4044:d25f4c0fa160 framework
splitting code into OrthancFramework and OrthancServer
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Wed, 10 Jun 2020 20:30:34 +0200 |
parents | Resources/Samples/Python/ContinuousPatientAnonymization.py@94f4a18a79cc |
children | d9473bd5ed43 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/OrthancServer/Resources/Samples/Python/ContinuousPatientAnonymization.py Wed Jun 10 20:30:34 2020 +0200 @@ -0,0 +1,100 @@ +#!/usr/bin/python + +# Orthanc - A Lightweight, RESTful DICOM Store +# Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics +# Department, University Hospital of Liege, Belgium +# Copyright (C) 2017-2020 Osimis S.A., Belgium +# +# This program is free software: you can redistribute it and/or +# modify it under the terms of the GNU General Public License as +# published by the Free Software Foundation, either version 3 of the +# License, or (at your option) any later version. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +# General Public License for more details. +# +# You should have received a copy of the GNU General Public License +# along with this program. If not, see <http://www.gnu.org/licenses/>. + + + +import time +import sys +import RestToolbox +import md5 + + +## +## Print help message +## + +if len(sys.argv) != 3: + print(""" +Sample script that anonymizes patients in real-time. A patient gets +anonymized as soon as she gets stable (i.e. when no DICOM instance has +been received for this patient for a sufficient amount of time - cf. +the configuration option "StableAge"). + +Usage: %s [hostname] [HTTP port] +For instance: %s 127.0.0.1 8042 +""" % (sys.argv[0], sys.argv[0])) + exit(-1) + +URL = 'http://%s:%d' % (sys.argv[1], int(sys.argv[2])) + + + +## +## The following function is called whenever a patient gets stable +## + +COUNT = 1 + +def AnonymizePatient(path): + global URL + global COUNT + + patient = RestToolbox.DoGet(URL + path) + patientID = patient['MainDicomTags']['PatientID'] + + # Ignore anonymized patients + if not 'AnonymizedFrom' in patient: + print('Patient with ID "%s" is stabilized: anonymizing it...' % (patientID)) + + # The PatientID after anonymization is taken as the 8 first + # characters from the MD5 hash of the original PatientID + anonymizedID = md5.new(patientID).hexdigest()[:8] + anonymizedName = 'Anonymized patient %d' % COUNT + COUNT += 1 + + RestToolbox.DoPost(URL + path + '/anonymize', + { 'Replace' : { 'PatientID' : anonymizedID, + 'PatientName' : anonymizedName } }) + + # Delete the source patient after the anonymization + RestToolbox.DoDelete(URL + change['Path']) + + + +## +## Main loop that listens to the changes API. +## + +current = 0 +while True: + r = RestToolbox.DoGet(URL + '/changes', { + 'since' : current, + 'limit' : 4 # Retrieve at most 4 changes at once + }) + + for change in r['Changes']: + if change['ChangeType'] == 'StablePatient': + AnonymizePatient(change['Path']) + + current = r['Last'] + + if r['Done']: + print('Everything has been processed: Waiting...') + time.sleep(1)