--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/OrthancFramework/Sources/DicomParsing/ParsedDicomDir.cpp	Wed Jun 10 20:30:34 2020 +0200
@@ -0,0 +1,195 @@
+/**
+ * Orthanc - A Lightweight, RESTful DICOM Store
+ * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
+ * Department, University Hospital of Liege, Belgium
+ * Copyright (C) 2017-2020 Osimis S.A., Belgium
+ *
+ * This program is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License as
+ * published by the Free Software Foundation, either version 3 of the
+ * License, or (at your option) any later version.
+ *
+ * In addition, as a special exception, the copyright holders of this
+ * program give permission to link the code of its release with the
+ * OpenSSL project's "OpenSSL" library (or with modified versions of it
+ * that use the same license as the "OpenSSL" library), and distribute
+ * the linked executables. You must obey the GNU General Public License
+ * in all respects for all of the code used other than "OpenSSL". If you
+ * modify file(s) with this exception, you may extend this exception to
+ * your version of the file(s), but you are not obligated to do so. If
+ * you do not wish to do so, delete this exception statement from your
+ * version. If you delete this exception statement from all source files
+ * in the program, then also delete it here.
+ * 
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+ **/
+
+
+#include "../PrecompiledHeaders.h"
+#include "ParsedDicomDir.h"
+
+#include "../Compatibility.h"
+#include "../OrthancException.h"
+#include "ParsedDicomFile.h"
+#include "FromDcmtkBridge.h"
+
+#include <dcmtk/dcmdata/dcdeftag.h>
+
+
+namespace Orthanc
+{
+  void ParsedDicomDir::Clear()
+  {
+    for (size_t i = 0; i < content_.size(); i++)
+    {
+      assert(content_[i] != NULL);
+      delete content_[i];
+    }
+  }
+
+  
+  bool ParsedDicomDir::LookupIndexOfOffset(size_t& target,
+                                           unsigned int offset) const
+  {
+    if (offset == 0)
+    {
+      return false;
+    }
+
+    OffsetToIndex::const_iterator found = offsetToIndex_.find(offset);
+    if (found == offsetToIndex_.end())
+    {
+      // Error in the algorithm that computes the offsets
+      throw OrthancException(ErrorCode_InternalError);
+    }
+    else
+    {
+      target = found->second;
+      return true;
+    }
+  }
+
+
+  ParsedDicomDir::ParsedDicomDir(const std::string content)
+  {
+    ParsedDicomFile dicom(content);
+
+    DcmSequenceOfItems* sequence = NULL;
+    if (dicom.GetDcmtkObject().getDataset() == NULL ||
+        !dicom.GetDcmtkObject().getDataset()->findAndGetSequence(DCM_DirectoryRecordSequence, sequence).good() ||
+        sequence == NULL)
+    {
+      throw OrthancException(ErrorCode_BadFileFormat, "Not a DICOMDIR");
+    }
+
+    content_.resize(sequence->card());
+    nextOffsets_.resize(content_.size());
+    lowerOffsets_.resize(content_.size());
+
+    // Manually reconstruct the list of all the available offsets of
+    // "DcmItem", as "fStartPosition" is a protected member in DCMTK
+    // API
+    std::set<uint32_t> availableOffsets;
+    availableOffsets.insert(0);
+
+
+    for (unsigned long i = 0; i < sequence->card(); i++)
+    {
+      DcmItem* item = sequence->getItem(i);
+      if (item == NULL)
+      {
+        Clear();
+        throw OrthancException(ErrorCode_InternalError);
+      }
+
+      Uint32 next, lower;
+      if (!item->findAndGetUint32(DCM_OffsetOfTheNextDirectoryRecord, next).good() ||
+          !item->findAndGetUint32(DCM_OffsetOfReferencedLowerLevelDirectoryEntity, lower).good())
+      {
+        item->writeXML(std::cout);
+        throw OrthancException(ErrorCode_BadFileFormat,
+                               "Missing offsets in DICOMDIR");
+      }          
+
+      nextOffsets_[i] = next;
+      lowerOffsets_[i] = lower;
+
+      std::unique_ptr<DicomMap> entry(new DicomMap);
+      FromDcmtkBridge::ExtractDicomSummary(*entry, *item);
+
+      if (next != 0)
+      {
+        availableOffsets.insert(next);
+      }
+
+      if (lower != 0)
+      {
+        availableOffsets.insert(lower);
+      }
+
+      content_[i] = entry.release();
+    }
+
+    if (content_.size() != availableOffsets.size())
+    {
+      throw OrthancException(ErrorCode_BadFileFormat,
+                             "Inconsistent offsets in DICOMDIR");
+    }
+
+    unsigned int index = 0;
+    for (std::set<uint32_t>::const_iterator it = availableOffsets.begin();
+         it != availableOffsets.end(); ++it)
+    {
+      offsetToIndex_[*it] = index;
+      index ++;
+    }    
+  }
+
+
+  const DicomMap& ParsedDicomDir::GetItem(size_t i) const
+  {
+    if (i >= content_.size())
+    {
+      throw OrthancException(ErrorCode_ParameterOutOfRange);
+    }
+    else
+    {
+      assert(content_[i] != NULL);
+      return *content_[i];
+    }
+  }
+
+
+  bool ParsedDicomDir::LookupNext(size_t& target,
+                                  size_t index) const
+  {
+    if (index >= nextOffsets_.size())
+    {
+      throw OrthancException(ErrorCode_ParameterOutOfRange);
+    }
+    else
+    {
+      return LookupIndexOfOffset(target, nextOffsets_[index]);
+    }
+  }
+
+
+  bool ParsedDicomDir::LookupLower(size_t& target,
+                                   size_t index) const
+  {
+    if (index >= lowerOffsets_.size())
+    {
+      throw OrthancException(ErrorCode_ParameterOutOfRange);
+    }
+    else
+    {
+      return LookupIndexOfOffset(target, lowerOffsets_[index]);
+    }
+  }
+}