Mercurial > hg > orthanc
diff Core/DicomParsing/DicomModification.cpp @ 2382:7284093111b0
big reorganization to cleanly separate framework vs. server
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
|---|---|
| date | Tue, 29 Aug 2017 21:17:35 +0200 |
| parents | OrthancServer/DicomModification.cpp@f5fc61337bdf |
| children | 878b59270859 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Core/DicomParsing/DicomModification.cpp Tue Aug 29 21:17:35 2017 +0200 @@ -0,0 +1,1132 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017 Osimis, Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "DicomModification.h" + +#include "../Logging.h" +#include "../OrthancException.h" +#include "FromDcmtkBridge.h" + +#include <memory> // For std::auto_ptr + + +static const std::string ORTHANC_DEIDENTIFICATION_METHOD_2008 = + "Orthanc " ORTHANC_VERSION " - PS 3.15-2008 Table E.1-1"; + +static const std::string ORTHANC_DEIDENTIFICATION_METHOD_2017c = + "Orthanc " ORTHANC_VERSION " - PS 3.15-2017c Table E.1-1 Basic Profile"; + +namespace Orthanc +{ + bool DicomModification::CancelReplacement(const DicomTag& tag) + { + Replacements::iterator it = replacements_.find(tag); + + if (it != replacements_.end()) + { + delete it->second; + replacements_.erase(it); + return true; + } + else + { + return false; + } + } + + + void DicomModification::ReplaceInternal(const DicomTag& tag, + const Json::Value& value) + { + Replacements::iterator it = replacements_.find(tag); + + if (it != replacements_.end()) + { + delete it->second; + it->second = NULL; // In the case of an exception during the clone + it->second = new Json::Value(value); // Clone + } + else + { + replacements_[tag] = new Json::Value(value); // Clone + } + } + + + void DicomModification::ClearReplacements() + { + for (Replacements::iterator it = replacements_.begin(); + it != replacements_.end(); ++it) + { + delete it->second; + } + + replacements_.clear(); + } + + + void DicomModification::MarkNotOrthancAnonymization() + { + Replacements::iterator it = replacements_.find(DICOM_TAG_DEIDENTIFICATION_METHOD); + + if (it != replacements_.end() && + (it->second->asString() == ORTHANC_DEIDENTIFICATION_METHOD_2008 || + it->second->asString() == ORTHANC_DEIDENTIFICATION_METHOD_2017c)) + { + delete it->second; + replacements_.erase(it); + } + } + + + void DicomModification::MapDicomIdentifier(ParsedDicomFile& dicom, + ResourceType level) + { + std::auto_ptr<DicomTag> tag; + + switch (level) + { + case ResourceType_Study: + tag.reset(new DicomTag(DICOM_TAG_STUDY_INSTANCE_UID)); + break; + + case ResourceType_Series: + tag.reset(new DicomTag(DICOM_TAG_SERIES_INSTANCE_UID)); + break; + + case ResourceType_Instance: + tag.reset(new DicomTag(DICOM_TAG_SOP_INSTANCE_UID)); + break; + + default: + throw OrthancException(ErrorCode_InternalError); + } + + std::string original; + if (!dicom.GetTagValue(original, *tag)) + { + original = ""; + } + + std::string mapped; + + UidMap::const_iterator previous = uidMap_.find(std::make_pair(level, original)); + if (previous == uidMap_.end()) + { + mapped = FromDcmtkBridge::GenerateUniqueIdentifier(level); + uidMap_.insert(std::make_pair(std::make_pair(level, original), mapped)); + } + else + { + mapped = previous->second; + } + + dicom.Replace(*tag, mapped, false /* don't try and decode data URI scheme for UIDs */, DicomReplaceMode_InsertIfAbsent); + } + + DicomModification::DicomModification() : + removePrivateTags_(false), + level_(ResourceType_Instance), + allowManualIdentifiers_(true), + keepStudyInstanceUid_(false), + keepSeriesInstanceUid_(false) + { + } + + DicomModification::~DicomModification() + { + ClearReplacements(); + } + + void DicomModification::Keep(const DicomTag& tag) + { + bool wasRemoved = IsRemoved(tag); + bool wasCleared = IsCleared(tag); + + removals_.erase(tag); + clearings_.erase(tag); + + bool wasReplaced = CancelReplacement(tag); + + if (tag == DICOM_TAG_STUDY_INSTANCE_UID) + { + keepStudyInstanceUid_ = true; + } + else if (tag == DICOM_TAG_SERIES_INSTANCE_UID) + { + keepSeriesInstanceUid_ = true; + } + else if (tag.IsPrivate()) + { + privateTagsToKeep_.insert(tag); + } + else if (!wasRemoved && + !wasReplaced && + !wasCleared) + { + LOG(WARNING) << "Marking this tag as to be kept has no effect: " << tag.Format(); + } + + MarkNotOrthancAnonymization(); + } + + void DicomModification::Remove(const DicomTag& tag) + { + removals_.insert(tag); + clearings_.erase(tag); + CancelReplacement(tag); + privateTagsToKeep_.erase(tag); + + MarkNotOrthancAnonymization(); + } + + void DicomModification::Clear(const DicomTag& tag) + { + removals_.erase(tag); + clearings_.insert(tag); + CancelReplacement(tag); + privateTagsToKeep_.erase(tag); + + MarkNotOrthancAnonymization(); + } + + bool DicomModification::IsRemoved(const DicomTag& tag) const + { + return removals_.find(tag) != removals_.end(); + } + + bool DicomModification::IsCleared(const DicomTag& tag) const + { + return clearings_.find(tag) != clearings_.end(); + } + + void DicomModification::Replace(const DicomTag& tag, + const Json::Value& value, + bool safeForAnonymization) + { + clearings_.erase(tag); + removals_.erase(tag); + privateTagsToKeep_.erase(tag); + ReplaceInternal(tag, value); + + if (!safeForAnonymization) + { + MarkNotOrthancAnonymization(); + } + } + + + bool DicomModification::IsReplaced(const DicomTag& tag) const + { + return replacements_.find(tag) != replacements_.end(); + } + + const Json::Value& DicomModification::GetReplacement(const DicomTag& tag) const + { + Replacements::const_iterator it = replacements_.find(tag); + + if (it == replacements_.end()) + { + throw OrthancException(ErrorCode_InexistentItem); + } + else + { + return *it->second; + } + } + + + std::string DicomModification::GetReplacementAsString(const DicomTag& tag) const + { + const Json::Value& json = GetReplacement(tag); + + if (json.type() != Json::stringValue) + { + throw OrthancException(ErrorCode_BadParameterType); + } + else + { + return json.asString(); + } + } + + + void DicomModification::SetRemovePrivateTags(bool removed) + { + removePrivateTags_ = removed; + + if (!removed) + { + MarkNotOrthancAnonymization(); + } + } + + void DicomModification::SetLevel(ResourceType level) + { + uidMap_.clear(); + level_ = level; + + if (level != ResourceType_Patient) + { + MarkNotOrthancAnonymization(); + } + } + + + void DicomModification::SetupAnonymization2008() + { + // This is Table E.1-1 from PS 3.15-2008 - DICOM Part 15: Security and System Management Profiles + // https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf + + removals_.insert(DicomTag(0x0008, 0x0014)); // Instance Creator UID + //removals_.insert(DicomTag(0x0008, 0x0018)); // SOP Instance UID => set in Apply() + removals_.insert(DicomTag(0x0008, 0x0050)); // Accession Number + removals_.insert(DicomTag(0x0008, 0x0080)); // Institution Name + removals_.insert(DicomTag(0x0008, 0x0081)); // Institution Address + removals_.insert(DicomTag(0x0008, 0x0090)); // Referring Physician's Name + removals_.insert(DicomTag(0x0008, 0x0092)); // Referring Physician's Address + removals_.insert(DicomTag(0x0008, 0x0094)); // Referring Physician's Telephone Numbers + removals_.insert(DicomTag(0x0008, 0x1010)); // Station Name + removals_.insert(DicomTag(0x0008, 0x1030)); // Study Description + removals_.insert(DicomTag(0x0008, 0x103e)); // Series Description + removals_.insert(DicomTag(0x0008, 0x1040)); // Institutional Department Name + removals_.insert(DicomTag(0x0008, 0x1048)); // Physician(s) of Record + removals_.insert(DicomTag(0x0008, 0x1050)); // Performing Physicians' Name + removals_.insert(DicomTag(0x0008, 0x1060)); // Name of Physician(s) Reading Study + removals_.insert(DicomTag(0x0008, 0x1070)); // Operators' Name + removals_.insert(DicomTag(0x0008, 0x1080)); // Admitting Diagnoses Description + removals_.insert(DicomTag(0x0008, 0x1155)); // Referenced SOP Instance UID + removals_.insert(DicomTag(0x0008, 0x2111)); // Derivation Description + //removals_.insert(DicomTag(0x0010, 0x0010)); // Patient's Name => cf. below (*) + //removals_.insert(DicomTag(0x0010, 0x0020)); // Patient ID => cf. below (*) + removals_.insert(DicomTag(0x0010, 0x0030)); // Patient's Birth Date + removals_.insert(DicomTag(0x0010, 0x0032)); // Patient's Birth Time + removals_.insert(DicomTag(0x0010, 0x0040)); // Patient's Sex + removals_.insert(DicomTag(0x0010, 0x1000)); // Other Patient Ids + removals_.insert(DicomTag(0x0010, 0x1001)); // Other Patient Names + removals_.insert(DicomTag(0x0010, 0x1010)); // Patient's Age + removals_.insert(DicomTag(0x0010, 0x1020)); // Patient's Size + removals_.insert(DicomTag(0x0010, 0x1030)); // Patient's Weight + removals_.insert(DicomTag(0x0010, 0x1090)); // Medical Record Locator + removals_.insert(DicomTag(0x0010, 0x2160)); // Ethnic Group + removals_.insert(DicomTag(0x0010, 0x2180)); // Occupation + removals_.insert(DicomTag(0x0010, 0x21b0)); // Additional Patient's History + removals_.insert(DicomTag(0x0010, 0x4000)); // Patient Comments + removals_.insert(DicomTag(0x0018, 0x1000)); // Device Serial Number + removals_.insert(DicomTag(0x0018, 0x1030)); // Protocol Name + //removals_.insert(DicomTag(0x0020, 0x000d)); // Study Instance UID => set in Apply() + //removals_.insert(DicomTag(0x0020, 0x000e)); // Series Instance UID => set in Apply() + removals_.insert(DicomTag(0x0020, 0x0010)); // Study ID + removals_.insert(DicomTag(0x0020, 0x0052)); // Frame of Reference UID + removals_.insert(DicomTag(0x0020, 0x0200)); // Synchronization Frame of Reference UID + removals_.insert(DicomTag(0x0020, 0x4000)); // Image Comments + removals_.insert(DicomTag(0x0040, 0x0275)); // Request Attributes Sequence + removals_.insert(DicomTag(0x0040, 0xa124)); // UID + removals_.insert(DicomTag(0x0040, 0xa730)); // Content Sequence + removals_.insert(DicomTag(0x0088, 0x0140)); // Storage Media File-set UID + removals_.insert(DicomTag(0x3006, 0x0024)); // Referenced Frame of Reference UID + removals_.insert(DicomTag(0x3006, 0x00c2)); // Related Frame of Reference UID + + // Some more removals (from the experience of DICOM files at the CHU of Liege) + removals_.insert(DicomTag(0x0010, 0x1040)); // Patient's Address + removals_.insert(DicomTag(0x0032, 0x1032)); // Requesting Physician + removals_.insert(DicomTag(0x0010, 0x2154)); // PatientTelephoneNumbers + removals_.insert(DicomTag(0x0010, 0x2000)); // Medical Alerts + + // Set the DeidentificationMethod tag + ReplaceInternal(DICOM_TAG_DEIDENTIFICATION_METHOD, ORTHANC_DEIDENTIFICATION_METHOD_2008); + } + + +#if 0 + /** + * This is a manual implementation by Alain Mazy. Only kept for reference. + * https://bitbucket.org/sjodogne/orthanc/commits/c6defdc4c611fca2ab528ba2c6937a742e0329a8?at=issue-46-anonymization + **/ + + void DicomModification::SetupAnonymization2011() + { + // This is Table E.1-1 from PS 3.15-2011 - DICOM Part 15: Security and System Management Profiles + // https://raw.githubusercontent.com/jodogne/dicom-specification/master/2011/11_15pu.pdf + + removals_.insert(DicomTag(0x0000, 0x1000)); // Affected SOP Instance UID + removals_.insert(DicomTag(0x0000, 0x1001)); // Requested SOP Instance UID + removals_.insert(DicomTag(0x0002, 0x0003)); // Media Storage SOP Instance UID => TODO: replace with a non-zero length UID that is internally consistent within a set of Instances + removals_.insert(DicomTag(0x0004, 0x1511)); // Referenced SOP Instance UID in File + removals_.insert(DicomTag(0x0008, 0x0010)); // Irradiation Event UID + removals_.insert(DicomTag(0x0008, 0x0014)); // Instance Creator UID + //removals_.insert(DicomTag(0x0008, 0x0018)); // SOP Instance UID => set in Apply() + clearings_.insert(DicomTag(0x0008, 0x0020)); // Study Date + clearings_.insert(DicomTag(0x0008, 0x0021)); // Series Date + clearings_.insert(DicomTag(0x0008, 0x0030)); // Study Time + clearings_.insert(DicomTag(0x0008, 0x0031)); // Series Time + removals_.insert(DicomTag(0x0008, 0x0022)); // Acquisition Date + removals_.insert(DicomTag(0x0008, 0x0023)); // Content Date + removals_.insert(DicomTag(0x0008, 0x0024)); // Overlay Date + removals_.insert(DicomTag(0x0008, 0x0025)); // Curve Date + removals_.insert(DicomTag(0x0008, 0x002a)); // Acquisition DateTime + removals_.insert(DicomTag(0x0008, 0x0032)); // Acquisition Time + removals_.insert(DicomTag(0x0008, 0x0033)); // Content Time + removals_.insert(DicomTag(0x0008, 0x0034)); // Overlay Time + removals_.insert(DicomTag(0x0008, 0x0035)); // Curve Time + removals_.insert(DicomTag(0x0008, 0x0050)); // Accession Number + removals_.insert(DicomTag(0x0008, 0x0058)); // Failed SOP Instance UID List + removals_.insert(DicomTag(0x0008, 0x0080)); // Institution Name + removals_.insert(DicomTag(0x0008, 0x0081)); // Institution Address + removals_.insert(DicomTag(0x0008, 0x0082)); // Institution Code Sequence + removals_.insert(DicomTag(0x0008, 0x0090)); // Referring Physician's Name + removals_.insert(DicomTag(0x0008, 0x0092)); // Referring Physician's Address + removals_.insert(DicomTag(0x0008, 0x0094)); // Referring Physician's Telephone Numbers + removals_.insert(DicomTag(0x0008, 0x0096)); // Referring Physician's Identification Sequence + removals_.insert(DicomTag(0x0008, 0x010d)); // Context Group Extension Creator UID + removals_.insert(DicomTag(0x0008, 0x0201)); // Timezone Offset From UTC + removals_.insert(DicomTag(0x0008, 0x0300)); // Current Patient Location + removals_.insert(DicomTag(0x0008, 0x1010)); // Station Name + removals_.insert(DicomTag(0x0008, 0x1030)); // Study Description + removals_.insert(DicomTag(0x0008, 0x103e)); // Series Description + removals_.insert(DicomTag(0x0008, 0x1040)); // Institutional Department Name + removals_.insert(DicomTag(0x0008, 0x1048)); // Physician(s) of Record + removals_.insert(DicomTag(0x0008, 0x1049)); // Physician(s) of Record Identification Sequence + removals_.insert(DicomTag(0x0008, 0x1050)); // Performing Physicians' Name + removals_.insert(DicomTag(0x0008, 0x1052)); // Performing Physicians Identification Sequence + removals_.insert(DicomTag(0x0008, 0x1060)); // Name of Physician(s) Reading Study + removals_.insert(DicomTag(0x0008, 0x1062)); // Physician Reading Study Identification Sequence + removals_.insert(DicomTag(0x0008, 0x1070)); // Operators' Name + removals_.insert(DicomTag(0x0008, 0x1072)); // Operators' Identification Sequence + removals_.insert(DicomTag(0x0008, 0x1080)); // Admitting Diagnoses Description + removals_.insert(DicomTag(0x0008, 0x1084)); // Admitting Diagnoses Code Sequence + removals_.insert(DicomTag(0x0008, 0x1110)); // Referenced Study Sequence + removals_.insert(DicomTag(0x0008, 0x1111)); // Referenced Performed Procedure Step Sequence + removals_.insert(DicomTag(0x0008, 0x1120)); // Referenced Patient Sequence + removals_.insert(DicomTag(0x0008, 0x1140)); // Referenced Image Sequence + removals_.insert(DicomTag(0x0008, 0x1155)); // Referenced SOP Instance UID + removals_.insert(DicomTag(0x0008, 0x1195)); // Transaction UID + removals_.insert(DicomTag(0x0008, 0x2111)); // Derivation Description + removals_.insert(DicomTag(0x0008, 0x2112)); // Source Image Sequence + removals_.insert(DicomTag(0x0008, 0x4000)); // Identifying Comments + removals_.insert(DicomTag(0x0008, 0x9123)); // Creator Version UID + //removals_.insert(DicomTag(0x0010, 0x0010)); // Patient's Name => cf. below (*) + //removals_.insert(DicomTag(0x0010, 0x0020)); // Patient ID => cf. below (*) + removals_.insert(DicomTag(0x0010, 0x0030)); // Patient's Birth Date + removals_.insert(DicomTag(0x0010, 0x0032)); // Patient's Birth Time + clearings_.insert(DicomTag(0x0010, 0x0040)); // Patient's Sex + removals_.insert(DicomTag(0x0010, 0x0050)); // Patient's Insurance Plan Code Sequence + removals_.insert(DicomTag(0x0010, 0x0101)); // Patient's Primary Language Code Sequence + removals_.insert(DicomTag(0x0010, 0x0102)); // Patient's Primary Language Modifier Code Sequence + removals_.insert(DicomTag(0x0010, 0x1000)); // Other Patient Ids + removals_.insert(DicomTag(0x0010, 0x1001)); // Other Patient Names + removals_.insert(DicomTag(0x0010, 0x1002)); // Other Patient IDs Sequence + removals_.insert(DicomTag(0x0010, 0x1005)); // Patient's Birth Name + removals_.insert(DicomTag(0x0010, 0x1010)); // Patient's Age + removals_.insert(DicomTag(0x0010, 0x1020)); // Patient's Size + removals_.insert(DicomTag(0x0010, 0x1030)); // Patient's Weight + removals_.insert(DicomTag(0x0010, 0x1040)); // Patient's Address + removals_.insert(DicomTag(0x0010, 0x1050)); // Insurance Plan Identification + removals_.insert(DicomTag(0x0010, 0x1060)); // Patient's Mother's Birth Name + removals_.insert(DicomTag(0x0010, 0x1080)); // Military Rank + removals_.insert(DicomTag(0x0010, 0x1081)); // Branch of Service + removals_.insert(DicomTag(0x0010, 0x1090)); // Medical Record Locator + removals_.insert(DicomTag(0x0010, 0x2000)); // Medical Alerts + removals_.insert(DicomTag(0x0010, 0x2110)); // Allergies + removals_.insert(DicomTag(0x0010, 0x2150)); // Country of Residence + removals_.insert(DicomTag(0x0010, 0x2152)); // Region of Residence + removals_.insert(DicomTag(0x0010, 0x2154)); // PatientTelephoneNumbers + removals_.insert(DicomTag(0x0010, 0x2160)); // Ethnic Group + removals_.insert(DicomTag(0x0010, 0x2180)); // Occupation + removals_.insert(DicomTag(0x0010, 0x21a0)); // Smoking Status + removals_.insert(DicomTag(0x0010, 0x21b0)); // Additional Patient's History + removals_.insert(DicomTag(0x0010, 0x21c0)); // Pregnancy Status + removals_.insert(DicomTag(0x0010, 0x21d0)); // Last Menstrual Date + removals_.insert(DicomTag(0x0010, 0x21f0)); // Patient's Religious Preference + removals_.insert(DicomTag(0x0010, 0x2203)); // Patient's Sex Neutered + removals_.insert(DicomTag(0x0010, 0x2297)); // Responsible Person + removals_.insert(DicomTag(0x0010, 0x2299)); // Responsible Organization + removals_.insert(DicomTag(0x0010, 0x4000)); // Patient Comments + removals_.insert(DicomTag(0x0018, 0x0010)); // Contrast Bolus Agent + removals_.insert(DicomTag(0x0018, 0x1000)); // Device Serial Number + removals_.insert(DicomTag(0x0018, 0x1002)); // Device UID + removals_.insert(DicomTag(0x0018, 0x1004)); // Plate ID + removals_.insert(DicomTag(0x0018, 0x1005)); // Generator ID + removals_.insert(DicomTag(0x0018, 0x1007)); // Cassette ID + removals_.insert(DicomTag(0x0018, 0x1008)); // Gantry ID + removals_.insert(DicomTag(0x0018, 0x1030)); // Protocol Name + removals_.insert(DicomTag(0x0018, 0x1400)); // Acquisition Device Processing Description + removals_.insert(DicomTag(0x0018, 0x4000)); // Acquisition Comments + removals_.insert(DicomTag(0x0018, 0x700a)); // Detector ID + removals_.insert(DicomTag(0x0018, 0xa003)); // Contribution Description + removals_.insert(DicomTag(0x0018, 0x9424)); // Acquisition Protocol Description + //removals_.insert(DicomTag(0x0020, 0x000d)); // Study Instance UID => set in Apply() + //removals_.insert(DicomTag(0x0020, 0x000e)); // Series Instance UID => set in Apply() + removals_.insert(DicomTag(0x0020, 0x0010)); // Study ID + removals_.insert(DicomTag(0x0020, 0x0052)); // Frame of Reference UID + removals_.insert(DicomTag(0x0020, 0x0200)); // Synchronization Frame of Reference UID + removals_.insert(DicomTag(0x0020, 0x3401)); // Modifying Device ID + removals_.insert(DicomTag(0x0020, 0x3404)); // Modifying Device Manufacturer + removals_.insert(DicomTag(0x0020, 0x3406)); // Modified Image Description + removals_.insert(DicomTag(0x0020, 0x4000)); // Image Comments + removals_.insert(DicomTag(0x0020, 0x9158)); // Frame Comments + removals_.insert(DicomTag(0x0020, 0x9161)); // Concatenation UID + removals_.insert(DicomTag(0x0020, 0x9164)); // Dimension Organization UID + //removals_.insert(DicomTag(0x0028, 0x1199)); // Palette Color Lookup Table UID => TODO: replace with a non-zero length UID that is internally consistent within a set of Instances + //removals_.insert(DicomTag(0x0028, 0x1214)); // Large Palette Color Lookup Table UID => TODO: replace with a non-zero length UID that is internally consistent within a set of Instances + removals_.insert(DicomTag(0x0028, 0x4000)); // Image Presentation Comments + removals_.insert(DicomTag(0x0032, 0x0012)); // Study ID Issuer + removals_.insert(DicomTag(0x0032, 0x1020)); // Scheduled Study Location + removals_.insert(DicomTag(0x0032, 0x1021)); // Scheduled Study Location AE Title + removals_.insert(DicomTag(0x0032, 0x1030)); // Reason for Study + removals_.insert(DicomTag(0x0032, 0x1032)); // Requesting Physician + removals_.insert(DicomTag(0x0032, 0x1033)); // Requesting Service + removals_.insert(DicomTag(0x0032, 0x1060)); // Requesting Procedure Description + removals_.insert(DicomTag(0x0032, 0x1070)); // Requested Contrast Agent + removals_.insert(DicomTag(0x0032, 0x4000)); // Study Comments + removals_.insert(DicomTag(0x0038, 0x0010)); // Admission ID + removals_.insert(DicomTag(0x0038, 0x0011)); // Issuer of Admission ID + removals_.insert(DicomTag(0x0038, 0x001e)); // Scheduled Patient Institution Residence + removals_.insert(DicomTag(0x0038, 0x0020)); // Admitting Date + removals_.insert(DicomTag(0x0038, 0x0021)); // Admitting Time + removals_.insert(DicomTag(0x0038, 0x0040)); // Discharge Diagnosis Description + removals_.insert(DicomTag(0x0038, 0x0050)); // Special Needs + removals_.insert(DicomTag(0x0038, 0x0060)); // Service Episode ID + removals_.insert(DicomTag(0x0038, 0x0061)); // Issuer of Service Episode ID + removals_.insert(DicomTag(0x0038, 0x0062)); // Service Episode Description + removals_.insert(DicomTag(0x0038, 0x0400)); // Patient's Institution Residence + removals_.insert(DicomTag(0x0038, 0x0500)); // Patient State + removals_.insert(DicomTag(0x0038, 0x4000)); // Visit Comments + removals_.insert(DicomTag(0x0038, 0x1234)); // Referenced Patient Alias Sequence + removals_.insert(DicomTag(0x0040, 0x0001)); // Scheduled Station AE Title + removals_.insert(DicomTag(0x0040, 0x0002)); // Scheduled Procedure Step Start Date + removals_.insert(DicomTag(0x0040, 0x0003)); // Scheduled Procedure Step Start Time + removals_.insert(DicomTag(0x0040, 0x0004)); // Scheduled Procedure Step End Date + removals_.insert(DicomTag(0x0040, 0x0005)); // Scheduled Procedure Step End Time + removals_.insert(DicomTag(0x0040, 0x0006)); // Scheduled Performing Physician Name + removals_.insert(DicomTag(0x0040, 0x0007)); // Scheduled Procedure Step Description + removals_.insert(DicomTag(0x0040, 0x000b)); // Scheduled Performing Physician Identification Sequence + removals_.insert(DicomTag(0x0040, 0x0010)); // Scheduled Station Name + removals_.insert(DicomTag(0x0040, 0x0011)); // Scheduled Procedure Step Location + removals_.insert(DicomTag(0x0040, 0x0012)); // Pre-Medication + removals_.insert(DicomTag(0x0040, 0x0241)); // Performed Station AE Title + removals_.insert(DicomTag(0x0040, 0x0242)); // Performed Station Name + removals_.insert(DicomTag(0x0040, 0x0243)); // Performed Location + removals_.insert(DicomTag(0x0040, 0x0244)); // Performed Procedure Step Start Date + removals_.insert(DicomTag(0x0040, 0x0245)); // Performed Procedure Step Start Time + removals_.insert(DicomTag(0x0040, 0x0248)); // Performed Station Name Code Sequence + removals_.insert(DicomTag(0x0040, 0x0253)); // Performed Procedure Step ID + removals_.insert(DicomTag(0x0040, 0x0254)); // Performed Procedure Step Description + removals_.insert(DicomTag(0x0040, 0x0275)); // Request Attributes Sequence + removals_.insert(DicomTag(0x0040, 0x0280)); // Comments on Performed Procedure Step + removals_.insert(DicomTag(0x0040, 0x0555)); // Acquisition Context Sequence + removals_.insert(DicomTag(0x0040, 0x1001)); // Requested Procedure ID + removals_.insert(DicomTag(0x0040, 0x1010)); // Names of Intended Recipient of Results + removals_.insert(DicomTag(0x0040, 0x1011)); // Intended Recipient of Results Identification Sequence + removals_.insert(DicomTag(0x0040, 0x1004)); // Patient Transport Arrangements + removals_.insert(DicomTag(0x0040, 0x1005)); // Requested Procedure Location + removals_.insert(DicomTag(0x0040, 0x1101)); // Person Identification Code Sequence + removals_.insert(DicomTag(0x0040, 0x1102)); // Person Address + removals_.insert(DicomTag(0x0040, 0x1103)); // Person Telephone Numbers + removals_.insert(DicomTag(0x0040, 0x1400)); // Requested Procedure Comments + removals_.insert(DicomTag(0x0040, 0x2001)); // Reason for Imaging Service Request + removals_.insert(DicomTag(0x0040, 0x2008)); // Order Entered By + removals_.insert(DicomTag(0x0040, 0x2009)); // Order Enterer Location + removals_.insert(DicomTag(0x0040, 0x2010)); // Order Callback Phone Number + removals_.insert(DicomTag(0x0040, 0x2016)); // Placer Order Number of Imaging Service Request + removals_.insert(DicomTag(0x0040, 0x2017)); // Filler Order Number of Imaging Service Request + removals_.insert(DicomTag(0x0040, 0x2400)); // Imaging Service Request Comments + removals_.insert(DicomTag(0x0040, 0x4023)); // Referenced General Purpose Scheduled Procedure Step Transaction UID + removals_.insert(DicomTag(0x0040, 0x4025)); // Scheduled Station Name Code Sequence + removals_.insert(DicomTag(0x0040, 0x4027)); // Scheduled Station Geographic Location Code Sequence + removals_.insert(DicomTag(0x0040, 0x4030)); // Performed Station Geographic Location Code Sequence + removals_.insert(DicomTag(0x0040, 0x4034)); // Scheduled Human Performers Sequence + removals_.insert(DicomTag(0x0040, 0x4035)); // Actual Human Performers Sequence + removals_.insert(DicomTag(0x0040, 0x4036)); // Human Performers Organization + removals_.insert(DicomTag(0x0040, 0x4037)); // Human Performers Name + removals_.insert(DicomTag(0x0040, 0xa027)); // Verifying Organization + removals_.insert(DicomTag(0x0040, 0xa073)); // Verifying Observer Sequence + removals_.insert(DicomTag(0x0040, 0xa075)); // Verifying Observer Name + removals_.insert(DicomTag(0x0040, 0xa078)); // Author Observer Sequence + removals_.insert(DicomTag(0x0040, 0xa07a)); // Participant Sequence + removals_.insert(DicomTag(0x0040, 0xa07c)); // Custodial Organization Sequence + removals_.insert(DicomTag(0x0040, 0xa088)); // Verifying Observer Identification Code Sequence + removals_.insert(DicomTag(0x0040, 0xa123)); // Person Name + removals_.insert(DicomTag(0x0040, 0xa124)); // UID + removals_.insert(DicomTag(0x0040, 0xa730)); // Content Sequence + removals_.insert(DicomTag(0x0040, 0x3001)); // Confidentiality Constraint on Patient Data Description + removals_.insert(DicomTag(0x0040, 0xdb0c)); // Template Extension Organization UID + removals_.insert(DicomTag(0x0040, 0xdb0d)); // Template Extension Creator UID + removals_.insert(DicomTag(0x0070, 0x0001)); // Graphic Annotation Sequence + removals_.insert(DicomTag(0x0070, 0x0084)); // Content Creator's Name + removals_.insert(DicomTag(0x0070, 0x0086)); // Content Creator's Identification Code Sequence + removals_.insert(DicomTag(0x0070, 0x031a)); // Fiducial UID + removals_.insert(DicomTag(0x0088, 0x0140)); // Storage Media File-set UID + removals_.insert(DicomTag(0x0088, 0x0200)); // Icon Image Sequence + removals_.insert(DicomTag(0x0088, 0x0904)); // Topic Title + removals_.insert(DicomTag(0x0088, 0x0906)); // Topic Subject + removals_.insert(DicomTag(0x0088, 0x0910)); // Topic Author + removals_.insert(DicomTag(0x0088, 0x0912)); // Topic Key Words + removals_.insert(DicomTag(0x0400, 0x0100)); // Digital Signature UID + removals_.insert(DicomTag(0x0400, 0x0402)); // Referenced Digital Signature Sequence + removals_.insert(DicomTag(0x0400, 0x0403)); // Referenced SOP Instance MAC Sequence + removals_.insert(DicomTag(0x0400, 0x0404)); // MAC + removals_.insert(DicomTag(0x0400, 0x0550)); // Modified Attributes Sequence + removals_.insert(DicomTag(0x0400, 0x0561)); // Original Attributes Sequence + removals_.insert(DicomTag(0x2030, 0x0020)); // Text String + removals_.insert(DicomTag(0x3006, 0x0024)); // Referenced Frame of Reference UID + removals_.insert(DicomTag(0x3006, 0x00c2)); // Related Frame of Reference UID + removals_.insert(DicomTag(0x300a, 0x0013)); // Dose Reference UID + removals_.insert(DicomTag(0x300e, 0x0008)); // Reviewer Name + removals_.insert(DicomTag(0x4000, 0x0010)); // Arbitrary + removals_.insert(DicomTag(0x4000, 0x4000)); // Text Comments + removals_.insert(DicomTag(0x4008, 0x0042)); // Results ID Issuer + removals_.insert(DicomTag(0x4008, 0x0102)); // Interpretation Recorder + removals_.insert(DicomTag(0x4008, 0x010a)); // Interpretation Transcriber + removals_.insert(DicomTag(0x4008, 0x010b)); // Interpretation Text + removals_.insert(DicomTag(0x4008, 0x010c)); // Interpretation Author + removals_.insert(DicomTag(0x4008, 0x0111)); // Interpretation Approver Sequence + removals_.insert(DicomTag(0x4008, 0x0114)); // Physician Approving Interpretation + removals_.insert(DicomTag(0x4008, 0x0115)); // Interpretation Diagnosis Description + removals_.insert(DicomTag(0x4008, 0x0118)); // Results Distribution List Sequence + removals_.insert(DicomTag(0x4008, 0x0119)); // Distribution Name + removals_.insert(DicomTag(0x4008, 0x011a)); // Distribution Address + removals_.insert(DicomTag(0x4008, 0x0202)); // Interpretation ID Issuer + removals_.insert(DicomTag(0x4008, 0x0300)); // Impressions + removals_.insert(DicomTag(0x4008, 0x4000)); // Results Comments + removals_.insert(DicomTag(0xfffa, 0xfffa)); // Digital Signature Sequence + removals_.insert(DicomTag(0xfffc, 0xfffc)); // Data Set Trailing Padding + //removals_.insert(DicomTag(0x60xx, 0x4000)); // Overlay Comments => TODO + //removals_.insert(DicomTag(0x60xx, 0x3000)); // Overlay Data => TODO + + // Set the DeidentificationMethod tag + ReplaceInternal(DICOM_TAG_DEIDENTIFICATION_METHOD, ORTHANC_DEIDENTIFICATION_METHOD_2011); + } +#endif + + + + void DicomModification::SetupAnonymization2017c() + { + /** + * This is Table E.1-1 from PS 3.15-2017c (DICOM Part 15: Security + * and System Management Profiles), "basic profile" column. It was + * generated automatically with the + * "../Resources/GenerateAnonymizationProfile.py" script. + * https://raw.githubusercontent.com/jodogne/dicom-specification/master/2017c/part15.pdf + **/ + + // TODO: (50xx,xxxx) with rule X // Curve Data + // TODO: (60xx,3000) with rule X // Overlay Data + // TODO: (60xx,4000) with rule X // Overlay Comments + // Tag (0x0008, 0x0018) is set in Apply() // SOP Instance UID + // Tag (0x0010, 0x0010) is set below (*) // Patient's Name + // Tag (0x0010, 0x0020) is set below (*) // Patient ID + // Tag (0x0020, 0x000d) is set in Apply() // Study Instance UID + // Tag (0x0020, 0x000e) is set in Apply() // Series Instance UID + clearings_.insert(DicomTag(0x0008, 0x0020)); // Study Date + clearings_.insert(DicomTag(0x0008, 0x0023)); /* Z/D */ // Content Date + clearings_.insert(DicomTag(0x0008, 0x0030)); // Study Time + clearings_.insert(DicomTag(0x0008, 0x0033)); /* Z/D */ // Content Time + clearings_.insert(DicomTag(0x0008, 0x0050)); // Accession Number + clearings_.insert(DicomTag(0x0008, 0x0090)); // Referring Physician's Name + clearings_.insert(DicomTag(0x0008, 0x009c)); // Consulting Physician's Name + clearings_.insert(DicomTag(0x0010, 0x0030)); // Patient's Birth Date + clearings_.insert(DicomTag(0x0010, 0x0040)); // Patient's Sex + clearings_.insert(DicomTag(0x0018, 0x0010)); /* Z/D */ // Contrast Bolus Agent + clearings_.insert(DicomTag(0x0020, 0x0010)); // Study ID + clearings_.insert(DicomTag(0x0040, 0x1101)); /* D */ // Person Identification Code Sequence + clearings_.insert(DicomTag(0x0040, 0x2016)); // Placer Order Number / Imaging Service Request + clearings_.insert(DicomTag(0x0040, 0x2017)); // Filler Order Number / Imaging Service Request + clearings_.insert(DicomTag(0x0040, 0xa073)); /* D */ // Verifying Observer Sequence + clearings_.insert(DicomTag(0x0040, 0xa075)); /* D */ // Verifying Observer Name + clearings_.insert(DicomTag(0x0040, 0xa088)); // Verifying Observer Identification Code Sequence + clearings_.insert(DicomTag(0x0040, 0xa123)); /* D */ // Person Name + clearings_.insert(DicomTag(0x0070, 0x0001)); /* D */ // Graphic Annotation Sequence + clearings_.insert(DicomTag(0x0070, 0x0084)); // Content Creator's Name + removals_.insert(DicomTag(0x0000, 0x1000)); // Affected SOP Instance UID + removals_.insert(DicomTag(0x0000, 0x1001)); /* TODO UID */ // Requested SOP Instance UID + removals_.insert(DicomTag(0x0002, 0x0003)); /* TODO UID */ // Media Storage SOP Instance UID + removals_.insert(DicomTag(0x0004, 0x1511)); /* TODO UID */ // Referenced SOP Instance UID in File + removals_.insert(DicomTag(0x0008, 0x0014)); /* TODO UID */ // Instance Creator UID + removals_.insert(DicomTag(0x0008, 0x0015)); // Instance Coercion DateTime + removals_.insert(DicomTag(0x0008, 0x0021)); /* X/D */ // Series Date + removals_.insert(DicomTag(0x0008, 0x0022)); /* X/Z */ // Acquisition Date + removals_.insert(DicomTag(0x0008, 0x0024)); // Overlay Date + removals_.insert(DicomTag(0x0008, 0x0025)); // Curve Date + removals_.insert(DicomTag(0x0008, 0x002a)); /* X/D */ // Acquisition DateTime + removals_.insert(DicomTag(0x0008, 0x0031)); /* X/D */ // Series Time + removals_.insert(DicomTag(0x0008, 0x0032)); /* X/Z */ // Acquisition Time + removals_.insert(DicomTag(0x0008, 0x0034)); // Overlay Time + removals_.insert(DicomTag(0x0008, 0x0035)); // Curve Time + removals_.insert(DicomTag(0x0008, 0x0058)); /* TODO UID */ // Failed SOP Instance UID List + removals_.insert(DicomTag(0x0008, 0x0080)); /* X/Z/D */ // Institution Name + removals_.insert(DicomTag(0x0008, 0x0081)); // Institution Address + removals_.insert(DicomTag(0x0008, 0x0082)); /* X/Z/D */ // Institution Code Sequence + removals_.insert(DicomTag(0x0008, 0x0092)); // Referring Physician's Address + removals_.insert(DicomTag(0x0008, 0x0094)); // Referring Physician's Telephone Numbers + removals_.insert(DicomTag(0x0008, 0x0096)); // Referring Physician Identification Sequence + removals_.insert(DicomTag(0x0008, 0x009d)); // Consulting Physician Identification Sequence + removals_.insert(DicomTag(0x0008, 0x0201)); // Timezone Offset From UTC + removals_.insert(DicomTag(0x0008, 0x1010)); /* X/Z/D */ // Station Name + removals_.insert(DicomTag(0x0008, 0x1030)); // Study Description + removals_.insert(DicomTag(0x0008, 0x103e)); // Series Description + removals_.insert(DicomTag(0x0008, 0x1040)); // Institutional Department Name + removals_.insert(DicomTag(0x0008, 0x1048)); // Physician(s) of Record + removals_.insert(DicomTag(0x0008, 0x1049)); // Physician(s) of Record Identification Sequence + removals_.insert(DicomTag(0x0008, 0x1050)); // Performing Physicians' Name + removals_.insert(DicomTag(0x0008, 0x1052)); // Performing Physician Identification Sequence + removals_.insert(DicomTag(0x0008, 0x1060)); // Name of Physician(s) Reading Study + removals_.insert(DicomTag(0x0008, 0x1062)); // Physician(s) Reading Study Identification Sequence + removals_.insert(DicomTag(0x0008, 0x1070)); /* X/Z/D */ // Operators' Name + removals_.insert(DicomTag(0x0008, 0x1072)); /* X/D */ // Operators' Identification Sequence + removals_.insert(DicomTag(0x0008, 0x1080)); // Admitting Diagnoses Description + removals_.insert(DicomTag(0x0008, 0x1084)); // Admitting Diagnoses Code Sequence + removals_.insert(DicomTag(0x0008, 0x1110)); /* X/Z */ // Referenced Study Sequence + removals_.insert(DicomTag(0x0008, 0x1111)); /* X/Z/D */ // Referenced Performed Procedure Step Sequence + removals_.insert(DicomTag(0x0008, 0x1120)); // Referenced Patient Sequence + removals_.insert(DicomTag(0x0008, 0x1140)); /* X/Z/U* */ // Referenced Image Sequence + removals_.insert(DicomTag(0x0008, 0x1155)); /* TODO UID */ // Referenced SOP Instance UID + removals_.insert(DicomTag(0x0008, 0x1195)); /* TODO UID */ // Transaction UID + removals_.insert(DicomTag(0x0008, 0x2111)); // Derivation Description + removals_.insert(DicomTag(0x0008, 0x2112)); /* X/Z/U* */ // Source Image Sequence + removals_.insert(DicomTag(0x0008, 0x3010)); /* TODO UID */ // Irradiation Event UID + removals_.insert(DicomTag(0x0008, 0x4000)); // Identifying Comments + removals_.insert(DicomTag(0x0010, 0x0021)); // Issuer of Patient ID + removals_.insert(DicomTag(0x0010, 0x0032)); // Patient's Birth Time + removals_.insert(DicomTag(0x0010, 0x0050)); // Patient's Insurance Plan Code Sequence + removals_.insert(DicomTag(0x0010, 0x0101)); // Patient's Primary Language Code Sequence + removals_.insert(DicomTag(0x0010, 0x0102)); // Patient's Primary Language Modifier Code Sequence + removals_.insert(DicomTag(0x0010, 0x1000)); // Other Patient IDs + removals_.insert(DicomTag(0x0010, 0x1001)); // Other Patient Names + removals_.insert(DicomTag(0x0010, 0x1002)); // Other Patient IDs Sequence + removals_.insert(DicomTag(0x0010, 0x1005)); // Patient's Birth Name + removals_.insert(DicomTag(0x0010, 0x1010)); // Patient's Age + removals_.insert(DicomTag(0x0010, 0x1020)); // Patient's Size + removals_.insert(DicomTag(0x0010, 0x1030)); // Patient's Weight + removals_.insert(DicomTag(0x0010, 0x1040)); // Patient Address + removals_.insert(DicomTag(0x0010, 0x1050)); // Insurance Plan Identification + removals_.insert(DicomTag(0x0010, 0x1060)); // Patient's Mother's Birth Name + removals_.insert(DicomTag(0x0010, 0x1080)); // Military Rank + removals_.insert(DicomTag(0x0010, 0x1081)); // Branch of Service + removals_.insert(DicomTag(0x0010, 0x1090)); // Medical Record Locator + removals_.insert(DicomTag(0x0010, 0x1100)); // Referenced Patient Photo Sequence + removals_.insert(DicomTag(0x0010, 0x2000)); // Medical Alerts + removals_.insert(DicomTag(0x0010, 0x2110)); // Allergies + removals_.insert(DicomTag(0x0010, 0x2150)); // Country of Residence + removals_.insert(DicomTag(0x0010, 0x2152)); // Region of Residence + removals_.insert(DicomTag(0x0010, 0x2154)); // Patient's Telephone Numbers + removals_.insert(DicomTag(0x0010, 0x2155)); // Patient's Telecom Information + removals_.insert(DicomTag(0x0010, 0x2160)); // Ethnic Group + removals_.insert(DicomTag(0x0010, 0x2180)); // Occupation + removals_.insert(DicomTag(0x0010, 0x21a0)); // Smoking Status + removals_.insert(DicomTag(0x0010, 0x21b0)); // Additional Patient's History + removals_.insert(DicomTag(0x0010, 0x21c0)); // Pregnancy Status + removals_.insert(DicomTag(0x0010, 0x21d0)); // Last Menstrual Date + removals_.insert(DicomTag(0x0010, 0x21f0)); // Patient's Religious Preference + removals_.insert(DicomTag(0x0010, 0x2203)); /* X/Z */ // Patient Sex Neutered + removals_.insert(DicomTag(0x0010, 0x2297)); // Responsible Person + removals_.insert(DicomTag(0x0010, 0x2299)); // Responsible Organization + removals_.insert(DicomTag(0x0010, 0x4000)); // Patient Comments + removals_.insert(DicomTag(0x0018, 0x1000)); /* X/Z/D */ // Device Serial Number + removals_.insert(DicomTag(0x0018, 0x1002)); /* TODO UID */ // Device UID + removals_.insert(DicomTag(0x0018, 0x1004)); // Plate ID + removals_.insert(DicomTag(0x0018, 0x1005)); // Generator ID + removals_.insert(DicomTag(0x0018, 0x1007)); // Cassette ID + removals_.insert(DicomTag(0x0018, 0x1008)); // Gantry ID + removals_.insert(DicomTag(0x0018, 0x1030)); /* X/D */ // Protocol Name + removals_.insert(DicomTag(0x0018, 0x1400)); /* X/D */ // Acquisition Device Processing Description + removals_.insert(DicomTag(0x0018, 0x2042)); /* TODO UID */ // Target UID + removals_.insert(DicomTag(0x0018, 0x4000)); // Acquisition Comments + removals_.insert(DicomTag(0x0018, 0x700a)); /* X/D */ // Detector ID + removals_.insert(DicomTag(0x0018, 0x9424)); // Acquisition Protocol Description + removals_.insert(DicomTag(0x0018, 0x9516)); /* X/D */ // Start Acquisition DateTime + removals_.insert(DicomTag(0x0018, 0x9517)); /* X/D */ // End Acquisition DateTime + removals_.insert(DicomTag(0x0018, 0xa003)); // Contribution Description + removals_.insert(DicomTag(0x0020, 0x0052)); /* TODO UID */ // Frame of Reference UID + removals_.insert(DicomTag(0x0020, 0x0200)); /* TODO UID */ // Synchronization Frame of Reference UID + removals_.insert(DicomTag(0x0020, 0x3401)); // Modifying Device ID + removals_.insert(DicomTag(0x0020, 0x3404)); // Modifying Device Manufacturer + removals_.insert(DicomTag(0x0020, 0x3406)); // Modified Image Description + removals_.insert(DicomTag(0x0020, 0x4000)); // Image Comments + removals_.insert(DicomTag(0x0020, 0x9158)); // Frame Comments + removals_.insert(DicomTag(0x0020, 0x9161)); /* TODO UID */ // Concatenation UID + removals_.insert(DicomTag(0x0020, 0x9164)); /* TODO UID */ // Dimension Organization UID + removals_.insert(DicomTag(0x0028, 0x1199)); /* TODO UID */ // Palette Color Lookup Table UID + removals_.insert(DicomTag(0x0028, 0x1214)); /* TODO UID */ // Large Palette Color Lookup Table UID + removals_.insert(DicomTag(0x0028, 0x4000)); // Image Presentation Comments + removals_.insert(DicomTag(0x0032, 0x0012)); // Study ID Issuer + removals_.insert(DicomTag(0x0032, 0x1020)); // Scheduled Study Location + removals_.insert(DicomTag(0x0032, 0x1021)); // Scheduled Study Location AE Title + removals_.insert(DicomTag(0x0032, 0x1030)); // Reason for Study + removals_.insert(DicomTag(0x0032, 0x1032)); // Requesting Physician + removals_.insert(DicomTag(0x0032, 0x1033)); // Requesting Service + removals_.insert(DicomTag(0x0032, 0x1060)); /* X/Z */ // Requested Procedure Description + removals_.insert(DicomTag(0x0032, 0x1070)); // Requested Contrast Agent + removals_.insert(DicomTag(0x0032, 0x4000)); // Study Comments + removals_.insert(DicomTag(0x0038, 0x0004)); // Referenced Patient Alias Sequence + removals_.insert(DicomTag(0x0038, 0x0010)); // Admission ID + removals_.insert(DicomTag(0x0038, 0x0011)); // Issuer of Admission ID + removals_.insert(DicomTag(0x0038, 0x001e)); // Scheduled Patient Institution Residence + removals_.insert(DicomTag(0x0038, 0x0020)); // Admitting Date + removals_.insert(DicomTag(0x0038, 0x0021)); // Admitting Time + removals_.insert(DicomTag(0x0038, 0x0040)); // Discharge Diagnosis Description + removals_.insert(DicomTag(0x0038, 0x0050)); // Special Needs + removals_.insert(DicomTag(0x0038, 0x0060)); // Service Episode ID + removals_.insert(DicomTag(0x0038, 0x0061)); // Issuer of Service Episode ID + removals_.insert(DicomTag(0x0038, 0x0062)); // Service Episode Description + removals_.insert(DicomTag(0x0038, 0x0300)); // Current Patient Location + removals_.insert(DicomTag(0x0038, 0x0400)); // Patient's Institution Residence + removals_.insert(DicomTag(0x0038, 0x0500)); // Patient State + removals_.insert(DicomTag(0x0038, 0x4000)); // Visit Comments + removals_.insert(DicomTag(0x0040, 0x0001)); // Scheduled Station AE Title + removals_.insert(DicomTag(0x0040, 0x0002)); // Scheduled Procedure Step Start Date + removals_.insert(DicomTag(0x0040, 0x0003)); // Scheduled Procedure Step Start Time + removals_.insert(DicomTag(0x0040, 0x0004)); // Scheduled Procedure Step End Date + removals_.insert(DicomTag(0x0040, 0x0005)); // Scheduled Procedure Step End Time + removals_.insert(DicomTag(0x0040, 0x0006)); // Scheduled Performing Physician Name + removals_.insert(DicomTag(0x0040, 0x0007)); // Scheduled Procedure Step Description + removals_.insert(DicomTag(0x0040, 0x000b)); // Scheduled Performing Physician Identification Sequence + removals_.insert(DicomTag(0x0040, 0x0010)); // Scheduled Station Name + removals_.insert(DicomTag(0x0040, 0x0011)); // Scheduled Procedure Step Location + removals_.insert(DicomTag(0x0040, 0x0012)); // Pre-Medication + removals_.insert(DicomTag(0x0040, 0x0241)); // Performed Station AE Title + removals_.insert(DicomTag(0x0040, 0x0242)); // Performed Station Name + removals_.insert(DicomTag(0x0040, 0x0243)); // Performed Location + removals_.insert(DicomTag(0x0040, 0x0244)); // Performed Procedure Step Start Date + removals_.insert(DicomTag(0x0040, 0x0245)); // Performed Procedure Step Start Time + removals_.insert(DicomTag(0x0040, 0x0250)); // Performed Procedure Step End Date + removals_.insert(DicomTag(0x0040, 0x0251)); // Performed Procedure Step End Time + removals_.insert(DicomTag(0x0040, 0x0253)); // Performed Procedure Step ID + removals_.insert(DicomTag(0x0040, 0x0254)); // Performed Procedure Step Description + removals_.insert(DicomTag(0x0040, 0x0275)); // Request Attributes Sequence + removals_.insert(DicomTag(0x0040, 0x0280)); // Comments on the Performed Procedure Step + removals_.insert(DicomTag(0x0040, 0x0555)); // Acquisition Context Sequence + removals_.insert(DicomTag(0x0040, 0x1001)); // Requested Procedure ID + removals_.insert(DicomTag(0x0040, 0x1004)); // Patient Transport Arrangements + removals_.insert(DicomTag(0x0040, 0x1005)); // Requested Procedure Location + removals_.insert(DicomTag(0x0040, 0x1010)); // Names of Intended Recipient of Results + removals_.insert(DicomTag(0x0040, 0x1011)); // Intended Recipients of Results Identification Sequence + removals_.insert(DicomTag(0x0040, 0x1102)); // Person Address + removals_.insert(DicomTag(0x0040, 0x1103)); // Person's Telephone Numbers + removals_.insert(DicomTag(0x0040, 0x1104)); // Person's Telecom Information + removals_.insert(DicomTag(0x0040, 0x1400)); // Requested Procedure Comments + removals_.insert(DicomTag(0x0040, 0x2001)); // Reason for the Imaging Service Request + removals_.insert(DicomTag(0x0040, 0x2008)); // Order Entered By + removals_.insert(DicomTag(0x0040, 0x2009)); // Order Enterer Location + removals_.insert(DicomTag(0x0040, 0x2010)); // Order Callback Phone Number + removals_.insert(DicomTag(0x0040, 0x2011)); // Order Callback Telecom Information + removals_.insert(DicomTag(0x0040, 0x2400)); // Imaging Service Request Comments + removals_.insert(DicomTag(0x0040, 0x3001)); // Confidentiality Constraint on Patient Data Description + removals_.insert(DicomTag(0x0040, 0x4005)); // Scheduled Procedure Step Start DateTime + removals_.insert(DicomTag(0x0040, 0x4010)); // Scheduled Procedure Step Modification DateTime + removals_.insert(DicomTag(0x0040, 0x4011)); // Expected Completion DateTime + removals_.insert(DicomTag(0x0040, 0x4023)); /* TODO UID */ // Referenced General Purpose Scheduled Procedure Step Transaction UID + removals_.insert(DicomTag(0x0040, 0x4025)); // Scheduled Station Name Code Sequence + removals_.insert(DicomTag(0x0040, 0x4027)); // Scheduled Station Geographic Location Code Sequence + removals_.insert(DicomTag(0x0040, 0x4028)); // Performed Station Name Code Sequence + removals_.insert(DicomTag(0x0040, 0x4030)); // Performed Station Geographic Location Code Sequence + removals_.insert(DicomTag(0x0040, 0x4034)); // Scheduled Human Performers Sequence + removals_.insert(DicomTag(0x0040, 0x4035)); // Actual Human Performers Sequence + removals_.insert(DicomTag(0x0040, 0x4036)); // Human Performers Organization + removals_.insert(DicomTag(0x0040, 0x4037)); // Human Performers Name + removals_.insert(DicomTag(0x0040, 0x4050)); // Performed Procedure Step Start DateTime + removals_.insert(DicomTag(0x0040, 0x4051)); // Performed Procedure Step End DateTime + removals_.insert(DicomTag(0x0040, 0x4052)); // Procedure Step Cancellation DateTime + removals_.insert(DicomTag(0x0040, 0xa027)); // Verifying Organization + removals_.insert(DicomTag(0x0040, 0xa078)); // Author Observer Sequence + removals_.insert(DicomTag(0x0040, 0xa07a)); // Participant Sequence + removals_.insert(DicomTag(0x0040, 0xa07c)); // Custodial Organization Sequence + removals_.insert(DicomTag(0x0040, 0xa124)); /* TODO UID */ // UID + removals_.insert(DicomTag(0x0040, 0xa171)); /* TODO UID */ // Observation UID + removals_.insert(DicomTag(0x0040, 0xa172)); /* TODO UID */ // Referenced Observation UID (Trial) + removals_.insert(DicomTag(0x0040, 0xa192)); // Observation Date (Trial) + removals_.insert(DicomTag(0x0040, 0xa193)); // Observation Time (Trial) + removals_.insert(DicomTag(0x0040, 0xa307)); // Current Observer (Trial) + removals_.insert(DicomTag(0x0040, 0xa352)); // Verbal Source (Trial) + removals_.insert(DicomTag(0x0040, 0xa353)); // Address (Trial) + removals_.insert(DicomTag(0x0040, 0xa354)); // Telephone Number (Trial) + removals_.insert(DicomTag(0x0040, 0xa358)); // Verbal Source Identifier Code Sequence (Trial) + removals_.insert(DicomTag(0x0040, 0xa402)); /* TODO UID */ // Observation Subject UID (Trial) + removals_.insert(DicomTag(0x0040, 0xa730)); // Content Sequence + removals_.insert(DicomTag(0x0040, 0xdb0c)); /* TODO UID */ // Template Extension Organization UID + removals_.insert(DicomTag(0x0040, 0xdb0d)); /* TODO UID */ // Template Extension Creator UID + removals_.insert(DicomTag(0x0062, 0x0021)); /* TODO UID */ // Tracking UID + removals_.insert(DicomTag(0x0070, 0x0086)); // Content Creator's Identification Code Sequence + removals_.insert(DicomTag(0x0070, 0x031a)); /* TODO UID */ // Fiducial UID + removals_.insert(DicomTag(0x0070, 0x1101)); /* TODO UID */ // Presentation Display Collection UID + removals_.insert(DicomTag(0x0070, 0x1102)); /* TODO UID */ // Presentation Sequence Collection UID + removals_.insert(DicomTag(0x0088, 0x0140)); /* TODO UID */ // Storage Media File-set UID + removals_.insert(DicomTag(0x0088, 0x0200)); // Icon Image Sequence(see Note 12) + removals_.insert(DicomTag(0x0088, 0x0904)); // Topic Title + removals_.insert(DicomTag(0x0088, 0x0906)); // Topic Subject + removals_.insert(DicomTag(0x0088, 0x0910)); // Topic Author + removals_.insert(DicomTag(0x0088, 0x0912)); // Topic Keywords + removals_.insert(DicomTag(0x0400, 0x0100)); // Digital Signature UID + removals_.insert(DicomTag(0x0400, 0x0402)); // Referenced Digital Signature Sequence + removals_.insert(DicomTag(0x0400, 0x0403)); // Referenced SOP Instance MAC Sequence + removals_.insert(DicomTag(0x0400, 0x0404)); // MAC + removals_.insert(DicomTag(0x0400, 0x0550)); // Modified Attributes Sequence + removals_.insert(DicomTag(0x0400, 0x0561)); // Original Attributes Sequence + removals_.insert(DicomTag(0x2030, 0x0020)); // Text String + removals_.insert(DicomTag(0x3006, 0x0024)); /* TODO UID */ // Referenced Frame of Reference UID + removals_.insert(DicomTag(0x3006, 0x00c2)); /* TODO UID */ // Related Frame of Reference UID + removals_.insert(DicomTag(0x3008, 0x0105)); // Source Serial Number + removals_.insert(DicomTag(0x300a, 0x0013)); /* TODO UID */ // Dose Reference UID + removals_.insert(DicomTag(0x300c, 0x0113)); // Reason for Omission Description + removals_.insert(DicomTag(0x300e, 0x0008)); /* X/Z */ // Reviewer Name + removals_.insert(DicomTag(0x4000, 0x0010)); // Arbitrary + removals_.insert(DicomTag(0x4000, 0x4000)); // Text Comments + removals_.insert(DicomTag(0x4008, 0x0042)); // Results ID Issuer + removals_.insert(DicomTag(0x4008, 0x0102)); // Interpretation Recorder + removals_.insert(DicomTag(0x4008, 0x010a)); // Interpretation Transcriber + removals_.insert(DicomTag(0x4008, 0x010b)); // Interpretation Text + removals_.insert(DicomTag(0x4008, 0x010c)); // Interpretation Author + removals_.insert(DicomTag(0x4008, 0x0111)); // Interpretation Approver Sequence + removals_.insert(DicomTag(0x4008, 0x0114)); // Physician Approving Interpretation + removals_.insert(DicomTag(0x4008, 0x0115)); // Interpretation Diagnosis Description + removals_.insert(DicomTag(0x4008, 0x0118)); // Results Distribution List Sequence + removals_.insert(DicomTag(0x4008, 0x0119)); // Distribution Name + removals_.insert(DicomTag(0x4008, 0x011a)); // Distribution Address + removals_.insert(DicomTag(0x4008, 0x0202)); // Interpretation ID Issuer + removals_.insert(DicomTag(0x4008, 0x0300)); // Impressions + removals_.insert(DicomTag(0x4008, 0x4000)); // Results Comments + removals_.insert(DicomTag(0xfffa, 0xfffa)); // Digital Signatures Sequence + removals_.insert(DicomTag(0xfffc, 0xfffc)); // Data Set Trailing Padding + + // Set the DeidentificationMethod tag + ReplaceInternal(DICOM_TAG_DEIDENTIFICATION_METHOD, ORTHANC_DEIDENTIFICATION_METHOD_2017c); + } + + + void DicomModification::SetupAnonymization(DicomVersion version) + { + removals_.clear(); + clearings_.clear(); + ClearReplacements(); + removePrivateTags_ = true; + level_ = ResourceType_Patient; + uidMap_.clear(); + privateTagsToKeep_.clear(); + + switch (version) + { + case DicomVersion_2008: + SetupAnonymization2008(); + break; + + case DicomVersion_2017c: + SetupAnonymization2017c(); + break; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + // Set the PatientIdentityRemoved tag + ReplaceInternal(DicomTag(0x0012, 0x0062), "YES"); + + // (*) Choose a random patient name and ID + std::string patientId = FromDcmtkBridge::GenerateUniqueIdentifier(ResourceType_Patient); + ReplaceInternal(DICOM_TAG_PATIENT_ID, patientId); + ReplaceInternal(DICOM_TAG_PATIENT_NAME, patientId); + } + + void DicomModification::Apply(ParsedDicomFile& toModify) + { + // Check the request + assert(ResourceType_Patient + 1 == ResourceType_Study && + ResourceType_Study + 1 == ResourceType_Series && + ResourceType_Series + 1 == ResourceType_Instance); + + if (IsRemoved(DICOM_TAG_PATIENT_ID) || + IsRemoved(DICOM_TAG_STUDY_INSTANCE_UID) || + IsRemoved(DICOM_TAG_SERIES_INSTANCE_UID) || + IsRemoved(DICOM_TAG_SOP_INSTANCE_UID)) + { + throw OrthancException(ErrorCode_BadRequest); + } + + + // Sanity checks at the patient level + if (level_ == ResourceType_Patient && !IsReplaced(DICOM_TAG_PATIENT_ID)) + { + LOG(ERROR) << "When modifying a patient, her PatientID is required to be modified"; + throw OrthancException(ErrorCode_BadRequest); + } + + if (!allowManualIdentifiers_) + { + if (level_ == ResourceType_Patient && IsReplaced(DICOM_TAG_STUDY_INSTANCE_UID)) + { + LOG(ERROR) << "When modifying a patient, the StudyInstanceUID cannot be manually modified"; + throw OrthancException(ErrorCode_BadRequest); + } + + if (level_ == ResourceType_Patient && IsReplaced(DICOM_TAG_SERIES_INSTANCE_UID)) + { + LOG(ERROR) << "When modifying a patient, the SeriesInstanceUID cannot be manually modified"; + throw OrthancException(ErrorCode_BadRequest); + } + + if (level_ == ResourceType_Patient && IsReplaced(DICOM_TAG_SOP_INSTANCE_UID)) + { + LOG(ERROR) << "When modifying a patient, the SopInstanceUID cannot be manually modified"; + throw OrthancException(ErrorCode_BadRequest); + } + } + + + // Sanity checks at the study level + if (level_ == ResourceType_Study && IsReplaced(DICOM_TAG_PATIENT_ID)) + { + LOG(ERROR) << "When modifying a study, the parent PatientID cannot be manually modified"; + throw OrthancException(ErrorCode_BadRequest); + } + + if (!allowManualIdentifiers_) + { + if (level_ == ResourceType_Study && IsReplaced(DICOM_TAG_SERIES_INSTANCE_UID)) + { + LOG(ERROR) << "When modifying a study, the SeriesInstanceUID cannot be manually modified"; + throw OrthancException(ErrorCode_BadRequest); + } + + if (level_ == ResourceType_Study && IsReplaced(DICOM_TAG_SOP_INSTANCE_UID)) + { + LOG(ERROR) << "When modifying a study, the SopInstanceUID cannot be manually modified"; + throw OrthancException(ErrorCode_BadRequest); + } + } + + + // Sanity checks at the series level + if (level_ == ResourceType_Series && IsReplaced(DICOM_TAG_PATIENT_ID)) + { + LOG(ERROR) << "When modifying a series, the parent PatientID cannot be manually modified"; + throw OrthancException(ErrorCode_BadRequest); + } + + if (level_ == ResourceType_Series && IsReplaced(DICOM_TAG_STUDY_INSTANCE_UID)) + { + LOG(ERROR) << "When modifying a series, the parent StudyInstanceUID cannot be manually modified"; + throw OrthancException(ErrorCode_BadRequest); + } + + if (!allowManualIdentifiers_) + { + if (level_ == ResourceType_Series && IsReplaced(DICOM_TAG_SOP_INSTANCE_UID)) + { + LOG(ERROR) << "When modifying a series, the SopInstanceUID cannot be manually modified"; + throw OrthancException(ErrorCode_BadRequest); + } + } + + + // Sanity checks at the instance level + if (level_ == ResourceType_Instance && IsReplaced(DICOM_TAG_PATIENT_ID)) + { + LOG(ERROR) << "When modifying an instance, the parent PatientID cannot be manually modified"; + throw OrthancException(ErrorCode_BadRequest); + } + + if (level_ == ResourceType_Instance && IsReplaced(DICOM_TAG_STUDY_INSTANCE_UID)) + { + LOG(ERROR) << "When modifying an instance, the parent StudyInstanceUID cannot be manually modified"; + throw OrthancException(ErrorCode_BadRequest); + } + + if (level_ == ResourceType_Instance && IsReplaced(DICOM_TAG_SERIES_INSTANCE_UID)) + { + LOG(ERROR) << "When modifying an instance, the parent SeriesInstanceUID cannot be manually modified"; + throw OrthancException(ErrorCode_BadRequest); + } + + + // (1) Remove the private tags, if need be + if (removePrivateTags_) + { + toModify.RemovePrivateTags(privateTagsToKeep_); + } + + // (2) Clear the tags specified by the user + for (SetOfTags::const_iterator it = clearings_.begin(); + it != clearings_.end(); ++it) + { + toModify.Clear(*it, true /* only clear if the tag exists in the original file */); + } + + // (3) Remove the tags specified by the user + for (SetOfTags::const_iterator it = removals_.begin(); + it != removals_.end(); ++it) + { + toModify.Remove(*it); + } + + // (4) Replace the tags + for (Replacements::const_iterator it = replacements_.begin(); + it != replacements_.end(); ++it) + { + toModify.Replace(it->first, *it->second, true /* decode data URI scheme */, DicomReplaceMode_InsertIfAbsent); + } + + // (5) Update the DICOM identifiers + if (level_ <= ResourceType_Study && + !IsReplaced(DICOM_TAG_STUDY_INSTANCE_UID)) + { + if (keepStudyInstanceUid_) + { + LOG(WARNING) << "Modifying a study while keeping its original StudyInstanceUID: This should be avoided!"; + } + else + { + MapDicomIdentifier(toModify, ResourceType_Study); + } + } + + if (level_ <= ResourceType_Series && + !IsReplaced(DICOM_TAG_SERIES_INSTANCE_UID)) + { + if (keepSeriesInstanceUid_) + { + LOG(WARNING) << "Modifying a series while keeping its original SeriesInstanceUID: This should be avoided!"; + } + else + { + MapDicomIdentifier(toModify, ResourceType_Series); + } + } + + if (level_ <= ResourceType_Instance && // Always true + !IsReplaced(DICOM_TAG_SOP_INSTANCE_UID)) + { + MapDicomIdentifier(toModify, ResourceType_Instance); + } + } +}