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annotate OrthancServer/Sources/DicomInstanceToStore.h @ 5224:feba2b0e91bc

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Fix a crash in /tools/reconstruct triggered by the Housekeeper plugin when only changing the StorageCompression.
author Alain Mazy <am@osimis.io>
date Mon, 03 Apr 2023 22:19:42 +0200
parents 0ea402b4d901
children 48b8dae6dc77
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2023 Osimis S.A., Belgium
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6 * Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium
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7 *
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8 * This program is free software: you can redistribute it and/or
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9 * modify it under the terms of the GNU General Public License as
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10 * published by the Free Software Foundation, either version 3 of the
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11 * License, or (at your option) any later version.
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12 *
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13 * This program is distributed in the hope that it will be useful, but
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14 * WITHOUT ANY WARRANTY; without even the implied warranty of
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15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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16 * General Public License for more details.
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17 *
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18 * You should have received a copy of the GNU General Public License
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19 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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20 **/
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22
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23 #pragma once
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24
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25 #include "../../OrthancFramework/Sources/DicomFormat/DicomMap.h"
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26 #include "DicomInstanceOrigin.h"
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27 #include "ServerEnumerations.h"
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28
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29 #include <boost/shared_ptr.hpp>
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31 class DcmDataset;
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32
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33 namespace Orthanc
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34 {
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35 class ImageAccessor;
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36 class ParsedDicomFile;
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37
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38 class DicomInstanceToStore : public boost::noncopyable
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39 {
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40 public:
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41 typedef std::map<std::pair<ResourceType, MetadataType>, std::string> MetadataMap;
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43 private:
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44 class FromBuffer;
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45 class FromParsedDicomFile;
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46 class FromDcmDataset;
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47
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48 MetadataMap metadata_;
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49 DicomInstanceOrigin origin_;
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50 bool skipIngestTranscoding_;
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51
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52 DicomInstanceToStore()
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53 : skipIngestTranscoding_(false)
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54 {}
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55
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56 public:
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57 virtual ~DicomInstanceToStore()
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58 {
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59 }
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60
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61 // WARNING: The source in the factory methods is *not* copied and
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62 // must *not* be deallocated as long as this wrapper object is alive
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63 static DicomInstanceToStore* CreateFromBuffer(const void* buffer,
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64 size_t size);
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65
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66 static DicomInstanceToStore* CreateFromBuffer(const std::string& buffer);
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68 static DicomInstanceToStore* CreateFromParsedDicomFile(ParsedDicomFile& dicom);
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70 static DicomInstanceToStore* CreateFromDcmDataset(DcmDataset& dataset);
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71
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72 void SetSkipIngestTranscoding(bool value)
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73 {
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74 skipIngestTranscoding_ = value;
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75 }
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77 bool SkipIngestTranscoding() const
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78 {
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79 return skipIngestTranscoding_;
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80 }
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82 void SetOrigin(const DicomInstanceOrigin& origin)
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83 {
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84 origin_ = origin;
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85 }
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87 const DicomInstanceOrigin& GetOrigin() const
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88 {
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89 return origin_;
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90 }
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92 const MetadataMap& GetMetadata() const
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93 {
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94 return metadata_;
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95 }
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97 void ClearMetadata()
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98 {
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99 metadata_.clear();
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100 }
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101
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102 // This function is notably used by modify/anonymize operations
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103 void AddMetadata(ResourceType level,
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104 MetadataType metadata,
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105 const std::string& value)
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106 {
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107 metadata_[std::make_pair(level, metadata)] = value;
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108 }
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109
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110 void CopyMetadata(const MetadataMap& metadata);
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111
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112 bool LookupTransferSyntax(DicomTransferSyntax& result) const;
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114 virtual ParsedDicomFile& GetParsedDicomFile() const = 0;
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116 virtual const void* GetBufferData() const = 0;
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118 virtual size_t GetBufferSize() const = 0;
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120 virtual bool HasPixelData() const;
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122 virtual void GetSummary(DicomMap& summary) const;
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123
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877bc3b96476 Handle Dicom sequences in ExtraMainDicomTags and save them in the 'MainDicomSequences' metadata
Alain Mazy <am@osimis.io>
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124 virtual void GetDicomAsJson(Json::Value& dicomAsJson,
877bc3b96476 Handle Dicom sequences in ExtraMainDicomTags and save them in the 'MainDicomSequences' metadata
Alain Mazy <am@osimis.io>
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125 const std::set<DicomTag>& ignoreTagLength) const;
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
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126
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8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
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parents: 4507
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127 virtual void DatasetToJson(Json::Value& target,
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
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128 DicomToJsonFormat format,
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
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129 DicomToJsonFlags flags,
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
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130 unsigned int maxStringLength) const;
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
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131
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
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132 virtual unsigned int GetFramesCount() const;
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
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133
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8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
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134 virtual ImageAccessor* DecodeFrame(unsigned int frame) const;
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1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
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135 };
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
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136 }