Mercurial > hg > orthanc
annotate OrthancServer/ParsedDicomFile.h @ 1763:f7014cca73c7
integration db-changes->mainline
author | Sebastien Jodogne <s.jodogne@gmail.com> |
---|---|
date | Thu, 29 Oct 2015 12:45:20 +0100 |
parents | ec66a16aa398 |
children | 5ad4e4d92ecb |
rev | line source |
---|---|
790 | 1 /** |
2 * Orthanc - A Lightweight, RESTful DICOM Store | |
1288
6e7e5ed91c2d
upgrade to year 2015
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1160
diff
changeset
|
3 * Copyright (C) 2012-2015 Sebastien Jodogne, Medical Physics |
6e7e5ed91c2d
upgrade to year 2015
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1160
diff
changeset
|
4 * Department, University Hospital of Liege, Belgium |
790 | 5 * |
6 * This program is free software: you can redistribute it and/or | |
7 * modify it under the terms of the GNU General Public License as | |
8 * published by the Free Software Foundation, either version 3 of the | |
9 * License, or (at your option) any later version. | |
10 * | |
11 * In addition, as a special exception, the copyright holders of this | |
12 * program give permission to link the code of its release with the | |
13 * OpenSSL project's "OpenSSL" library (or with modified versions of it | |
14 * that use the same license as the "OpenSSL" library), and distribute | |
15 * the linked executables. You must obey the GNU General Public License | |
16 * in all respects for all of the code used other than "OpenSSL". If you | |
17 * modify file(s) with this exception, you may extend this exception to | |
18 * your version of the file(s), but you are not obligated to do so. If | |
19 * you do not wish to do so, delete this exception statement from your | |
20 * version. If you delete this exception statement from all source files | |
21 * in the program, then also delete it here. | |
22 * | |
23 * This program is distributed in the hope that it will be useful, but | |
24 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
26 * General Public License for more details. | |
27 * | |
28 * You should have received a copy of the GNU General Public License | |
29 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
30 **/ | |
31 | |
32 | |
33 #pragma once | |
34 | |
35 #include "../Core/DicomFormat/DicomInstanceHasher.h" | |
36 #include "../Core/RestApi/RestApiOutput.h" | |
37 #include "ServerEnumerations.h" | |
1612
96582230ddcb
Core/ImageFormats folder renamed as Core/Images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1562
diff
changeset
|
38 #include "../Core/Images/ImageAccessor.h" |
96582230ddcb
Core/ImageFormats folder renamed as Core/Images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1562
diff
changeset
|
39 #include "../Core/Images/ImageBuffer.h" |
1737
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1735
diff
changeset
|
40 #include "../Core/IDynamicObject.h" |
790 | 41 |
42 namespace Orthanc | |
43 { | |
44 class ParsedDicomFile : public IDynamicObject | |
45 { | |
46 private: | |
794 | 47 struct PImpl; |
48 PImpl* pimpl_; | |
790 | 49 |
794 | 50 ParsedDicomFile(ParsedDicomFile& other); |
790 | 51 |
52 void Setup(const char* content, | |
53 size_t size); | |
54 | |
991
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
55 void RemovePrivateTagsInternal(const std::set<DicomTag>* toKeep); |
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
56 |
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1686
diff
changeset
|
57 void UpdateStorageUid(const DicomTag& tag, |
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1686
diff
changeset
|
58 const std::string& value, |
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1686
diff
changeset
|
59 bool decodeBinaryTags); |
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1686
diff
changeset
|
60 |
790 | 61 public: |
62 ParsedDicomFile(); // Create a minimal DICOM instance | |
63 | |
64 ParsedDicomFile(const char* content, | |
791 | 65 size_t size); |
790 | 66 |
791 | 67 ParsedDicomFile(const std::string& content); |
790 | 68 |
792 | 69 ~ParsedDicomFile(); |
70 | |
793 | 71 void* GetDcmtkObject(); |
790 | 72 |
793 | 73 ParsedDicomFile* Clone(); |
790 | 74 |
75 void SendPathValue(RestApiOutput& output, | |
76 const UriComponents& uri); | |
77 | |
78 void Answer(RestApiOutput& output); | |
79 | |
80 void Remove(const DicomTag& tag); | |
81 | |
1699
8ca0e89798b2
"/modify" can insert/modify sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1695
diff
changeset
|
82 void Replace(const DicomTag& tag, |
8ca0e89798b2
"/modify" can insert/modify sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1695
diff
changeset
|
83 const std::string& utf8Value, |
8ca0e89798b2
"/modify" can insert/modify sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1695
diff
changeset
|
84 DicomReplaceMode mode = DicomReplaceMode_InsertIfAbsent); |
1695 | 85 |
86 void Replace(const DicomTag& tag, | |
1699
8ca0e89798b2
"/modify" can insert/modify sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1695
diff
changeset
|
87 const Json::Value& value, // Assumed to be encoded with UTF-8 |
8ca0e89798b2
"/modify" can insert/modify sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1695
diff
changeset
|
88 bool decodeBinaryTags, |
1695 | 89 DicomReplaceMode mode = DicomReplaceMode_InsertIfAbsent); |
790 | 90 |
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1686
diff
changeset
|
91 void Insert(const DicomTag& tag, |
1695 | 92 const Json::Value& value, // Assumed to be encoded with UTF-8 |
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1686
diff
changeset
|
93 bool decodeBinaryTags); |
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1686
diff
changeset
|
94 |
991
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
95 void RemovePrivateTags() |
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
96 { |
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
97 RemovePrivateTagsInternal(NULL); |
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
98 } |
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
99 |
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
100 void RemovePrivateTags(const std::set<DicomTag>& toKeep) |
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
101 { |
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
102 RemovePrivateTagsInternal(&toKeep); |
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
103 } |
790 | 104 |
105 bool GetTagValue(std::string& value, | |
106 const DicomTag& tag); | |
107 | |
108 DicomInstanceHasher GetHasher(); | |
109 | |
110 void SaveToMemoryBuffer(std::string& buffer); | |
111 | |
112 void SaveToFile(const std::string& path); | |
800
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
795
diff
changeset
|
113 |
1562 | 114 void EmbedContent(const std::string& dataUriScheme); |
800
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
795
diff
changeset
|
115 |
1562 | 116 void EmbedImage(const ImageAccessor& accessor); |
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
117 |
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
118 void EmbedImage(const std::string& mime, |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
119 const std::string& content); |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
120 |
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
121 void ExtractImage(ImageBuffer& result, |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
122 unsigned int frame); |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
123 |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
124 void ExtractImage(ImageBuffer& result, |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
125 unsigned int frame, |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
126 ImageExtractionMode mode); |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
127 |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
128 void ExtractPngImage(std::string& result, |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
129 unsigned int frame, |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
130 ImageExtractionMode mode); |
956
2fd5a163776d
primitives for proper encoding handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
131 |
2fd5a163776d
primitives for proper encoding handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
132 Encoding GetEncoding() const; |
1090
e494ceb8d763
support more encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
991
diff
changeset
|
133 |
e494ceb8d763
support more encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
991
diff
changeset
|
134 void SetEncoding(Encoding encoding); |
1160
80671157d051
generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1090
diff
changeset
|
135 |
80671157d051
generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1090
diff
changeset
|
136 void ToJson(Json::Value& target, |
1686 | 137 DicomToJsonFormat format, |
1735
a001f6226c7c
primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1699
diff
changeset
|
138 DicomToJsonFlags flags, |
1686 | 139 unsigned int maxStringLength); |
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
140 |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
141 bool HasTag(const DicomTag& tag) const; |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
142 |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
143 void EmbedPdf(const std::string& pdf); |
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
144 |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
145 bool ExtractPdf(std::string& pdf); |
1662
09be34b2f30e
ParsedDicomFile::Convert()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1612
diff
changeset
|
146 |
09be34b2f30e
ParsedDicomFile::Convert()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1612
diff
changeset
|
147 void Convert(DicomMap& tags); |
790 | 148 }; |
149 | |
150 } |