Mercurial > hg > orthanc
annotate OrthancServer/OrthancRestApi/OrthancRestResources.cpp @ 1059:f25c79497739
patch glog for visual studio >= 11.0
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Fri, 25 Jul 2014 14:08:10 +0200 |
parents | 1701dcb6f554 |
children | f167b672db94 |
rev | line source |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
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3 * Copyright (C) 2012-2014 Medical Physics Department, CHU of Liege, |
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4 * Belgium |
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5 * |
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6 * This program is free software: you can redistribute it and/or |
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7 * modify it under the terms of the GNU General Public License as |
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8 * published by the Free Software Foundation, either version 3 of the |
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9 * License, or (at your option) any later version. |
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10 * |
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11 * In addition, as a special exception, the copyright holders of this |
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12 * program give permission to link the code of its release with the |
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13 * OpenSSL project's "OpenSSL" library (or with modified versions of it |
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14 * that use the same license as the "OpenSSL" library), and distribute |
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15 * the linked executables. You must obey the GNU General Public License |
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16 * in all respects for all of the code used other than "OpenSSL". If you |
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17 * modify file(s) with this exception, you may extend this exception to |
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18 * your version of the file(s), but you are not obligated to do so. If |
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19 * you do not wish to do so, delete this exception statement from your |
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20 * version. If you delete this exception statement from all source files |
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21 * in the program, then also delete it here. |
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22 * |
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23 * This program is distributed in the hope that it will be useful, but |
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24 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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26 * General Public License for more details. |
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27 * |
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28 * You should have received a copy of the GNU General Public License |
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29 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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30 **/ |
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31 |
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32 |
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33 #include "../PrecompiledHeadersServer.h" |
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34 #include "OrthancRestApi.h" |
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35 |
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36 #include "../ServerToolbox.h" |
795 | 37 #include "../FromDcmtkBridge.h" |
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38 |
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39 #include <glog/logging.h> |
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40 |
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41 namespace Orthanc |
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42 { |
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43 // List all the patients, studies, series or instances ---------------------- |
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44 |
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45 template <enum ResourceType resourceType> |
974 | 46 static void ListResources(RestApiGetCall& call) |
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47 { |
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48 Json::Value result; |
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49 OrthancRestApi::GetIndex(call).GetAllUuids(result, resourceType); |
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50 call.GetOutput().AnswerJson(result); |
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51 } |
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52 |
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53 template <enum ResourceType resourceType> |
974 | 54 static void GetSingleResource(RestApiGetCall& call) |
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55 { |
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56 Json::Value result; |
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57 if (OrthancRestApi::GetIndex(call).LookupResource(result, call.GetUriComponent("id", ""), resourceType)) |
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58 { |
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59 call.GetOutput().AnswerJson(result); |
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60 } |
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61 } |
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62 |
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63 template <enum ResourceType resourceType> |
974 | 64 static void DeleteSingleResource(RestApiDeleteCall& call) |
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65 { |
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66 Json::Value result; |
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67 if (OrthancRestApi::GetIndex(call).DeleteResource(result, call.GetUriComponent("id", ""), resourceType)) |
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68 { |
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69 call.GetOutput().AnswerJson(result); |
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70 } |
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71 } |
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72 |
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73 |
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74 // Get information about a single patient ----------------------------------- |
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75 |
974 | 76 static void IsProtectedPatient(RestApiGetCall& call) |
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77 { |
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78 std::string publicId = call.GetUriComponent("id", ""); |
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79 bool isProtected = OrthancRestApi::GetIndex(call).IsProtectedPatient(publicId); |
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80 call.GetOutput().AnswerBuffer(isProtected ? "1" : "0", "text/plain"); |
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81 } |
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82 |
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83 |
974 | 84 static void SetPatientProtection(RestApiPutCall& call) |
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85 { |
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86 ServerContext& context = OrthancRestApi::GetContext(call); |
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87 |
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88 std::string publicId = call.GetUriComponent("id", ""); |
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89 std::string s = Toolbox::StripSpaces(call.GetPutBody()); |
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90 |
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91 if (s == "0") |
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92 { |
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93 context.GetIndex().SetProtectedPatient(publicId, false); |
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94 call.GetOutput().AnswerBuffer("", "text/plain"); |
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95 } |
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96 else if (s == "1") |
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97 { |
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98 context.GetIndex().SetProtectedPatient(publicId, true); |
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99 call.GetOutput().AnswerBuffer("", "text/plain"); |
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100 } |
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101 else |
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102 { |
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103 // Bad request |
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104 } |
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105 } |
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106 |
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107 |
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108 // Get information about a single instance ---------------------------------- |
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109 |
974 | 110 static void GetInstanceFile(RestApiGetCall& call) |
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111 { |
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112 ServerContext& context = OrthancRestApi::GetContext(call); |
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113 |
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114 std::string publicId = call.GetUriComponent("id", ""); |
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115 context.AnswerDicomFile(call.GetOutput(), publicId, FileContentType_Dicom); |
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116 } |
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117 |
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118 |
974 | 119 static void ExportInstanceFile(RestApiPostCall& call) |
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120 { |
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121 ServerContext& context = OrthancRestApi::GetContext(call); |
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122 |
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123 std::string publicId = call.GetUriComponent("id", ""); |
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124 |
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125 std::string dicom; |
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126 context.ReadFile(dicom, publicId, FileContentType_Dicom); |
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127 |
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128 Toolbox::WriteFile(dicom, call.GetPostBody()); |
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129 |
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130 call.GetOutput().AnswerBuffer("{}", "application/json"); |
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131 } |
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132 |
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133 |
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134 template <bool simplify> |
974 | 135 static void GetInstanceTags(RestApiGetCall& call) |
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136 { |
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137 ServerContext& context = OrthancRestApi::GetContext(call); |
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138 |
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139 std::string publicId = call.GetUriComponent("id", ""); |
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140 |
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141 Json::Value full; |
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142 context.ReadJson(full, publicId); |
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143 |
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144 if (simplify) |
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145 { |
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146 Json::Value simplified; |
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147 SimplifyTags(simplified, full); |
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148 call.GetOutput().AnswerJson(simplified); |
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149 } |
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150 else |
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151 { |
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152 call.GetOutput().AnswerJson(full); |
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153 } |
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154 } |
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155 |
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156 |
974 | 157 static void GetInstanceTagsBis(RestApiGetCall& call) |
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158 { |
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159 bool simplify = call.HasArgument("simplify"); |
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160 |
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161 if (simplify) |
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162 { |
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163 GetInstanceTags<true>(call); |
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164 } |
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165 else |
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166 { |
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167 GetInstanceTags<false>(call); |
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168 } |
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169 } |
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170 |
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171 |
974 | 172 static void ListFrames(RestApiGetCall& call) |
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173 { |
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174 Json::Value instance; |
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175 if (OrthancRestApi::GetIndex(call).LookupResource(instance, call.GetUriComponent("id", ""), ResourceType_Instance)) |
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176 { |
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177 unsigned int numberOfFrames = 1; |
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178 |
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179 try |
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180 { |
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181 Json::Value tmp = instance["MainDicomTags"]["NumberOfFrames"]; |
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182 numberOfFrames = boost::lexical_cast<unsigned int>(tmp.asString()); |
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183 } |
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184 catch (...) |
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185 { |
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186 } |
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187 |
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188 Json::Value result = Json::arrayValue; |
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189 for (unsigned int i = 0; i < numberOfFrames; i++) |
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190 { |
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191 result.append(i); |
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192 } |
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193 |
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194 call.GetOutput().AnswerJson(result); |
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195 } |
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196 } |
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197 |
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198 |
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199 template <enum ImageExtractionMode mode> |
974 | 200 static void GetImage(RestApiGetCall& call) |
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201 { |
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202 ServerContext& context = OrthancRestApi::GetContext(call); |
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203 |
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204 std::string frameId = call.GetUriComponent("frame", "0"); |
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205 |
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206 unsigned int frame; |
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207 try |
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208 { |
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209 frame = boost::lexical_cast<unsigned int>(frameId); |
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210 } |
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211 catch (boost::bad_lexical_cast) |
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212 { |
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213 return; |
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214 } |
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215 |
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216 std::string publicId = call.GetUriComponent("id", ""); |
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217 std::string dicomContent, png; |
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218 context.ReadFile(dicomContent, publicId, FileContentType_Dicom); |
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219 |
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220 ParsedDicomFile dicom(dicomContent); |
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221 |
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222 try |
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223 { |
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224 dicom.ExtractPngImage(png, frame, mode); |
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225 call.GetOutput().AnswerBuffer(png, "image/png"); |
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226 } |
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227 catch (OrthancException& e) |
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228 { |
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229 if (e.GetErrorCode() == ErrorCode_ParameterOutOfRange) |
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230 { |
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231 // The frame number is out of the range for this DICOM |
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232 // instance, the resource is not existent |
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233 } |
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234 else |
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235 { |
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236 std::string root = ""; |
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237 for (size_t i = 1; i < call.GetFullUri().size(); i++) |
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238 { |
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239 root += "../"; |
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240 } |
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241 |
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242 call.GetOutput().Redirect(root + "app/images/unsupported.png"); |
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243 } |
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244 } |
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245 } |
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246 |
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247 |
974 | 248 static void GetMatlabImage(RestApiGetCall& call) |
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249 { |
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250 ServerContext& context = OrthancRestApi::GetContext(call); |
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251 |
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252 std::string frameId = call.GetUriComponent("frame", "0"); |
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253 |
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254 unsigned int frame; |
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255 try |
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256 { |
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257 frame = boost::lexical_cast<unsigned int>(frameId); |
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258 } |
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259 catch (boost::bad_lexical_cast) |
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260 { |
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261 return; |
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262 } |
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263 |
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264 std::string publicId = call.GetUriComponent("id", ""); |
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265 std::string dicomContent; |
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266 context.ReadFile(dicomContent, publicId, FileContentType_Dicom); |
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267 |
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268 ParsedDicomFile dicom(dicomContent); |
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269 ImageBuffer buffer; |
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270 dicom.ExtractImage(buffer, frame); |
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271 |
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272 ImageAccessor accessor(buffer.GetConstAccessor()); |
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273 |
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274 std::string result; |
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275 accessor.ToMatlabString(result); |
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276 |
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277 call.GetOutput().AnswerBuffer(result, "text/plain"); |
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278 } |
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279 |
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280 |
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281 |
974 | 282 static void GetResourceStatistics(RestApiGetCall& call) |
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283 { |
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284 std::string publicId = call.GetUriComponent("id", ""); |
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285 Json::Value result; |
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286 OrthancRestApi::GetIndex(call).GetStatistics(result, publicId); |
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287 call.GetOutput().AnswerJson(result); |
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288 } |
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289 |
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290 |
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291 |
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292 // Handling of metadata ----------------------------------------------------- |
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293 |
974 | 294 static void CheckValidResourceType(RestApiCall& call) |
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295 { |
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296 std::string resourceType = call.GetUriComponent("resourceType", ""); |
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297 StringToResourceType(resourceType.c_str()); |
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298 } |
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299 |
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300 |
974 | 301 static void ListMetadata(RestApiGetCall& call) |
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302 { |
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303 CheckValidResourceType(call); |
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304 |
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305 std::string publicId = call.GetUriComponent("id", ""); |
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306 std::list<MetadataType> metadata; |
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307 |
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308 OrthancRestApi::GetIndex(call).ListAvailableMetadata(metadata, publicId); |
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309 Json::Value result = Json::arrayValue; |
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310 |
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311 for (std::list<MetadataType>::const_iterator |
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312 it = metadata.begin(); it != metadata.end(); ++it) |
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313 { |
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314 result.append(EnumerationToString(*it)); |
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315 } |
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316 |
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317 call.GetOutput().AnswerJson(result); |
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318 } |
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319 |
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320 |
974 | 321 static void GetMetadata(RestApiGetCall& call) |
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322 { |
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323 CheckValidResourceType(call); |
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324 |
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325 std::string publicId = call.GetUriComponent("id", ""); |
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326 std::string name = call.GetUriComponent("name", ""); |
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327 MetadataType metadata = StringToMetadata(name); |
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328 |
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329 std::string value; |
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330 if (OrthancRestApi::GetIndex(call).LookupMetadata(value, publicId, metadata)) |
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331 { |
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332 call.GetOutput().AnswerBuffer(value, "text/plain"); |
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333 } |
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334 } |
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335 |
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336 |
974 | 337 static void DeleteMetadata(RestApiDeleteCall& call) |
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338 { |
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339 CheckValidResourceType(call); |
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340 |
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341 std::string publicId = call.GetUriComponent("id", ""); |
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342 std::string name = call.GetUriComponent("name", ""); |
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343 MetadataType metadata = StringToMetadata(name); |
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344 |
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345 if (metadata >= MetadataType_StartUser && |
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346 metadata <= MetadataType_EndUser) |
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347 { |
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348 // It is forbidden to modify internal metadata |
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349 OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata); |
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350 call.GetOutput().AnswerBuffer("", "text/plain"); |
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351 } |
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352 } |
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353 |
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354 |
974 | 355 static void SetMetadata(RestApiPutCall& call) |
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356 { |
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357 CheckValidResourceType(call); |
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358 |
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359 std::string publicId = call.GetUriComponent("id", ""); |
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360 std::string name = call.GetUriComponent("name", ""); |
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361 MetadataType metadata = StringToMetadata(name); |
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362 std::string value = call.GetPutBody(); |
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363 |
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364 if (metadata >= MetadataType_StartUser && |
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365 metadata <= MetadataType_EndUser) |
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366 { |
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367 // It is forbidden to modify internal metadata |
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368 OrthancRestApi::GetIndex(call).SetMetadata(publicId, metadata, value); |
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369 call.GetOutput().AnswerBuffer("", "text/plain"); |
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370 } |
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371 } |
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372 |
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373 |
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374 |
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375 |
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376 // Handling of attached files ----------------------------------------------- |
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377 |
974 | 378 static void ListAttachments(RestApiGetCall& call) |
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379 { |
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380 std::string resourceType = call.GetUriComponent("resourceType", ""); |
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381 std::string publicId = call.GetUriComponent("id", ""); |
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382 std::list<FileContentType> attachments; |
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383 OrthancRestApi::GetIndex(call).ListAvailableAttachments(attachments, publicId, StringToResourceType(resourceType.c_str())); |
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384 |
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385 Json::Value result = Json::arrayValue; |
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386 |
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387 for (std::list<FileContentType>::const_iterator |
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388 it = attachments.begin(); it != attachments.end(); ++it) |
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389 { |
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390 result.append(EnumerationToString(*it)); |
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391 } |
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392 |
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393 call.GetOutput().AnswerJson(result); |
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394 } |
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395 |
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396 |
974 | 397 static bool GetAttachmentInfo(FileInfo& info, RestApiCall& call) |
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398 { |
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399 CheckValidResourceType(call); |
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400 |
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401 std::string publicId = call.GetUriComponent("id", ""); |
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402 std::string name = call.GetUriComponent("name", ""); |
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403 FileContentType contentType = StringToContentType(name); |
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404 |
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405 return OrthancRestApi::GetIndex(call).LookupAttachment(info, publicId, contentType); |
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406 } |
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407 |
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408 |
974 | 409 static void GetAttachmentOperations(RestApiGetCall& call) |
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410 { |
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411 FileInfo info; |
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412 if (GetAttachmentInfo(info, call)) |
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413 { |
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414 Json::Value operations = Json::arrayValue; |
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415 |
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416 operations.append("compressed-data"); |
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417 |
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418 if (info.GetCompressedMD5() != "") |
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419 { |
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420 operations.append("compressed-md5"); |
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421 } |
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422 |
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423 operations.append("compressed-size"); |
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424 operations.append("data"); |
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425 |
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426 if (info.GetUncompressedMD5() != "") |
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427 { |
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428 operations.append("md5"); |
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429 } |
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430 |
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431 operations.append("size"); |
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432 |
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433 if (info.GetCompressedMD5() != "" && |
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434 info.GetUncompressedMD5() != "") |
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435 { |
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436 operations.append("verify-md5"); |
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437 } |
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438 |
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439 call.GetOutput().AnswerJson(operations); |
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440 } |
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441 } |
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442 |
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443 |
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444 template <int uncompress> |
974 | 445 static void GetAttachmentData(RestApiGetCall& call) |
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446 { |
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447 ServerContext& context = OrthancRestApi::GetContext(call); |
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448 |
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449 CheckValidResourceType(call); |
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450 |
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451 std::string publicId = call.GetUriComponent("id", ""); |
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452 std::string name = call.GetUriComponent("name", ""); |
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453 |
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454 std::string content; |
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455 context.ReadFile(content, publicId, StringToContentType(name), |
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456 (uncompress == 1)); |
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457 |
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458 call.GetOutput().AnswerBuffer(content, "application/octet-stream"); |
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459 } |
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460 |
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461 |
974 | 462 static void GetAttachmentSize(RestApiGetCall& call) |
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463 { |
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464 FileInfo info; |
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465 if (GetAttachmentInfo(info, call)) |
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466 { |
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467 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedSize()), "text/plain"); |
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468 } |
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469 } |
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470 |
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471 |
974 | 472 static void GetAttachmentCompressedSize(RestApiGetCall& call) |
751
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473 { |
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474 FileInfo info; |
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475 if (GetAttachmentInfo(info, call)) |
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476 { |
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477 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedSize()), "text/plain"); |
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478 } |
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479 } |
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480 |
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481 |
974 | 482 static void GetAttachmentMD5(RestApiGetCall& call) |
751
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483 { |
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484 FileInfo info; |
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485 if (GetAttachmentInfo(info, call) && |
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486 info.GetUncompressedMD5() != "") |
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487 { |
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488 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedMD5()), "text/plain"); |
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489 } |
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490 } |
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491 |
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492 |
974 | 493 static void GetAttachmentCompressedMD5(RestApiGetCall& call) |
751
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494 { |
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495 FileInfo info; |
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496 if (GetAttachmentInfo(info, call) && |
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497 info.GetCompressedMD5() != "") |
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498 { |
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499 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedMD5()), "text/plain"); |
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500 } |
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501 } |
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|
502 |
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503 |
974 | 504 static void VerifyAttachment(RestApiPostCall& call) |
751
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505 { |
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506 ServerContext& context = OrthancRestApi::GetContext(call); |
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507 CheckValidResourceType(call); |
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508 |
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509 std::string publicId = call.GetUriComponent("id", ""); |
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510 std::string name = call.GetUriComponent("name", ""); |
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511 |
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512 FileInfo info; |
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513 if (!GetAttachmentInfo(info, call) || |
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514 info.GetCompressedMD5() == "" || |
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515 info.GetUncompressedMD5() == "") |
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516 { |
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517 // Inexistent resource, or no MD5 available |
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518 return; |
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519 } |
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|
520 |
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521 bool ok = false; |
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|
522 |
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523 // First check whether the compressed data is correctly stored in the disk |
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524 std::string data; |
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525 context.ReadFile(data, publicId, StringToContentType(name), false); |
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526 |
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527 std::string actualMD5; |
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528 Toolbox::ComputeMD5(actualMD5, data); |
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529 |
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530 if (actualMD5 == info.GetCompressedMD5()) |
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531 { |
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532 // The compressed data is OK. If a compression algorithm was |
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533 // applied to it, now check the MD5 of the uncompressed data. |
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534 if (info.GetCompressionType() == CompressionType_None) |
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535 { |
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536 ok = true; |
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537 } |
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538 else |
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539 { |
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540 context.ReadFile(data, publicId, StringToContentType(name), true); |
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541 Toolbox::ComputeMD5(actualMD5, data); |
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542 ok = (actualMD5 == info.GetUncompressedMD5()); |
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543 } |
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544 } |
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545 |
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546 if (ok) |
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547 { |
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548 LOG(INFO) << "The attachment " << name << " of resource " << publicId << " has the right MD5"; |
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549 call.GetOutput().AnswerBuffer("{}", "application/json"); |
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550 } |
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551 else |
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552 { |
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553 LOG(INFO) << "The attachment " << name << " of resource " << publicId << " has bad MD5!"; |
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554 } |
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555 } |
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556 |
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557 |
974 | 558 static void UploadAttachment(RestApiPutCall& call) |
751
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559 { |
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560 ServerContext& context = OrthancRestApi::GetContext(call); |
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561 CheckValidResourceType(call); |
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562 |
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563 std::string publicId = call.GetUriComponent("id", ""); |
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564 std::string name = call.GetUriComponent("name", ""); |
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565 |
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566 const void* data = call.GetPutBody().size() ? &call.GetPutBody()[0] : NULL; |
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567 |
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568 FileContentType contentType = StringToContentType(name); |
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569 if (contentType >= FileContentType_StartUser && // It is forbidden to modify internal attachments |
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570 contentType <= FileContentType_EndUser && |
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571 context.AddAttachment(publicId, StringToContentType(name), data, call.GetPutBody().size())) |
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572 { |
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573 call.GetOutput().AnswerBuffer("{}", "application/json"); |
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574 } |
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575 } |
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576 |
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577 |
974 | 578 static void DeleteAttachment(RestApiDeleteCall& call) |
751
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579 { |
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580 CheckValidResourceType(call); |
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581 |
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582 std::string publicId = call.GetUriComponent("id", ""); |
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583 std::string name = call.GetUriComponent("name", ""); |
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584 FileContentType contentType = StringToContentType(name); |
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585 |
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586 if (contentType >= FileContentType_StartUser && |
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587 contentType <= FileContentType_EndUser) |
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588 { |
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|
589 // It is forbidden to delete internal attachments |
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590 OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType); |
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591 call.GetOutput().AnswerBuffer("{}", "application/json"); |
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592 } |
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|
593 } |
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|
594 |
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|
595 |
782 | 596 // Raw access to the DICOM tags of an instance ------------------------------ |
597 | |
974 | 598 static void GetRawContent(RestApiGetCall& call) |
782 | 599 { |
600 std::string id = call.GetUriComponent("id", ""); | |
601 | |
602 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); | |
603 | |
604 locker.GetDicom().SendPathValue(call.GetOutput(), call.GetTrailingUri()); | |
605 } | |
606 | |
751
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|
607 |
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|
608 |
960
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609 static bool ExtractSharedTags(Json::Value& shared, |
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610 ServerContext& context, |
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|
611 const std::string& publicId) |
958
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diff
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|
612 { |
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613 // Retrieve all the instances of this patient/study/series |
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614 typedef std::list<std::string> Instances; |
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615 Instances instances; |
959
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616 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
958
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|
617 |
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618 // Loop over the instances |
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619 bool isFirst = true; |
960
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620 shared = Json::objectValue; |
958
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621 |
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622 for (Instances::const_iterator it = instances.begin(); |
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623 it != instances.end(); it++) |
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624 { |
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625 // Get the tags of the current instance, in the simplified format |
960
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626 Json::Value tags; |
959
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627 |
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628 try |
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629 { |
960
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630 context.ReadJson(tags, *it); |
959
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631 } |
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632 catch (OrthancException&) |
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633 { |
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634 // Race condition: This instance has been removed since |
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635 // (*). Ignore this instance. |
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636 continue; |
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637 } |
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638 |
960
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639 if (tags.type() != Json::objectValue) |
958
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640 { |
960
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641 return false; // Error |
958
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642 } |
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|
643 |
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644 // Only keep the tags that are mapped to a string |
960
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645 Json::Value::Members members = tags.getMemberNames(); |
958
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646 for (size_t i = 0; i < members.size(); i++) |
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647 { |
960
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648 const Json::Value& tag = tags[members[i]]; |
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649 if (tag.type() != Json::objectValue || |
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650 tag["Type"].type() != Json::stringValue || |
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651 tag["Type"].asString() != "String") |
958
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652 { |
960
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653 tags.removeMember(members[i]); |
958
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654 } |
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655 } |
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|
656 |
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657 if (isFirst) |
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658 { |
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659 // This is the first instance, keep its tags as such |
960
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660 shared = tags; |
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661 isFirst = false; |
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662 } |
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663 else |
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664 { |
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665 // Loop over all the members of the shared tags extracted so |
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666 // far. If the value of one of these tags does not match its |
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667 // value in the current instance, remove it. |
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668 members = shared.getMemberNames(); |
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669 for (size_t i = 0; i < members.size(); i++) |
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670 { |
960
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671 if (!tags.isMember(members[i]) || |
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672 tags[members[i]]["Value"].asString() != shared[members[i]]["Value"].asString()) |
958
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673 { |
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674 shared.removeMember(members[i]); |
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675 } |
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676 } |
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677 } |
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|
678 } |
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|
679 |
960
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680 return true; |
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681 } |
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|
682 |
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683 |
974 | 684 static void GetSharedTags(RestApiGetCall& call) |
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685 { |
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686 ServerContext& context = OrthancRestApi::GetContext(call); |
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687 std::string publicId = call.GetUriComponent("id", ""); |
964
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688 bool simplify = call.HasArgument("simplify"); |
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|
689 |
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690 Json::Value sharedTags; |
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691 if (ExtractSharedTags(sharedTags, context, publicId)) |
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692 { |
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693 // Success: Send the value of the shared tags |
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694 if (simplify) |
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|
695 { |
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|
696 Json::Value simplified; |
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697 SimplifyTags(simplified, sharedTags); |
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698 call.GetOutput().AnswerJson(simplified); |
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|
699 } |
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|
700 else |
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|
701 { |
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|
702 call.GetOutput().AnswerJson(sharedTags); |
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|
703 } |
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diff
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|
704 } |
958
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|
705 } |
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|
706 |
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|
707 |
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708 static void GetModuleInternal(RestApiGetCall& call, |
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709 ResourceType resourceType, |
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710 ResourceType queryLevel) |
963
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711 { |
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712 if (resourceType != queryLevel && |
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713 !(resourceType == ResourceType_Study && queryLevel == ResourceType_Patient)) |
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|
714 { |
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|
715 throw OrthancException(ErrorCode_NotImplemented); |
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716 } |
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|
717 |
963
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718 ServerContext& context = OrthancRestApi::GetContext(call); |
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719 std::string publicId = call.GetUriComponent("id", ""); |
964
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|
720 bool simplify = call.HasArgument("simplify"); |
963
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|
721 |
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|
722 typedef std::set<DicomTag> Module; |
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|
723 Module module; |
1054
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|
724 DicomTag::GetTagsForModule(module, queryLevel); |
963
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diff
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|
725 |
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diff
changeset
|
726 Json::Value tags; |
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diff
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|
727 |
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diff
changeset
|
728 if (resourceType != ResourceType_Instance) |
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diff
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|
729 { |
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diff
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|
730 // Retrieve all the instances of this patient/study/series |
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|
731 typedef std::list<std::string> Instances; |
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732 Instances instances; |
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parents:
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|
733 context.GetIndex().GetChildInstances(instances, publicId); |
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diff
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|
734 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
735 if (instances.empty()) |
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diff
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|
736 { |
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diff
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|
737 return; // Error: No instance (should never happen) |
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diff
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|
738 } |
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960
diff
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|
739 |
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retrieve values of modules
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diff
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|
740 // Select one child instance |
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diff
changeset
|
741 publicId = instances.front(); |
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parents:
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diff
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|
742 } |
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parents:
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diff
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|
743 |
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diff
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|
744 context.ReadJson(tags, publicId); |
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parents:
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diff
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|
745 |
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diff
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|
746 // Filter the tags of the instance according to the module |
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diff
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|
747 Json::Value result = Json::objectValue; |
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diff
changeset
|
748 for (Module::const_iterator it = module.begin(); it != module.end(); it++) |
81134ea872ff
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parents:
960
diff
changeset
|
749 { |
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960
diff
changeset
|
750 std::string s = it->Format(); |
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diff
changeset
|
751 if (tags.isMember(s)) |
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parents:
960
diff
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|
752 { |
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parents:
960
diff
changeset
|
753 result[s] = tags[s]; |
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parents:
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diff
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|
754 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
755 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
756 |
81134ea872ff
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
757 if (simplify) |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
758 { |
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parents:
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diff
changeset
|
759 Json::Value simplified; |
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parents:
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diff
changeset
|
760 SimplifyTags(simplified, result); |
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diff
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|
761 call.GetOutput().AnswerJson(simplified); |
81134ea872ff
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parents:
960
diff
changeset
|
762 } |
81134ea872ff
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Sebastien Jodogne <s.jodogne@gmail.com>
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960
diff
changeset
|
763 else |
81134ea872ff
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
764 { |
81134ea872ff
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parents:
960
diff
changeset
|
765 call.GetOutput().AnswerJson(result); |
1054
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
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diff
changeset
|
766 } |
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parents:
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diff
changeset
|
767 } |
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
768 |
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Access patient module at the study level to cope with PatientID collisions
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parents:
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diff
changeset
|
769 |
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
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parents:
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diff
changeset
|
770 |
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
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parents:
974
diff
changeset
|
771 template <enum ResourceType resourceType> |
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Access patient module at the study level to cope with PatientID collisions
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changeset
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772 static void GetModule(RestApiGetCall& call) |
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diff
changeset
|
773 { |
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Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
774 GetModuleInternal(call, resourceType, resourceType); |
1701dcb6f554
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diff
changeset
|
775 } |
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
776 |
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
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parents:
974
diff
changeset
|
777 |
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
778 static void GetPatientModuleForStudy(RestApiGetCall& call) |
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Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
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|
779 { |
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
780 GetModuleInternal(call, ResourceType_Study, ResourceType_Patient); |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
781 } |
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retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
782 |
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retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
783 |
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
784 void OrthancRestApi::RegisterResources() |
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
785 { |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
786 Register("/instances", ListResources<ResourceType_Instance>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
787 Register("/patients", ListResources<ResourceType_Patient>); |
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
788 Register("/series", ListResources<ResourceType_Series>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
789 Register("/studies", ListResources<ResourceType_Study>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
790 |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
791 Register("/instances/{id}", DeleteSingleResource<ResourceType_Instance>); |
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
792 Register("/instances/{id}", GetSingleResource<ResourceType_Instance>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
793 Register("/patients/{id}", DeleteSingleResource<ResourceType_Patient>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
794 Register("/patients/{id}", GetSingleResource<ResourceType_Patient>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
795 Register("/series/{id}", DeleteSingleResource<ResourceType_Series>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
796 Register("/series/{id}", GetSingleResource<ResourceType_Series>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
797 Register("/studies/{id}", DeleteSingleResource<ResourceType_Study>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
798 Register("/studies/{id}", GetSingleResource<ResourceType_Study>); |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
799 |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
800 Register("/instances/{id}/statistics", GetResourceStatistics); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
801 Register("/patients/{id}/statistics", GetResourceStatistics); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
802 Register("/studies/{id}/statistics", GetResourceStatistics); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
803 Register("/series/{id}/statistics", GetResourceStatistics); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
804 |
964
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
805 Register("/patients/{id}/shared-tags", GetSharedTags); |
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
806 Register("/series/{id}/shared-tags", GetSharedTags); |
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
807 Register("/studies/{id}/shared-tags", GetSharedTags); |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
808 |
964
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
809 Register("/instances/{id}/module", GetModule<ResourceType_Instance>); |
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
810 Register("/patients/{id}/module", GetModule<ResourceType_Patient>); |
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
811 Register("/series/{id}/module", GetModule<ResourceType_Series>); |
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
812 Register("/studies/{id}/module", GetModule<ResourceType_Study>); |
1054
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
813 Register("/studies/{id}/module-patient", GetPatientModuleForStudy); |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
814 |
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
815 Register("/instances/{id}/file", GetInstanceFile); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
816 Register("/instances/{id}/export", ExportInstanceFile); |
964
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
817 Register("/instances/{id}/tags", GetInstanceTagsBis); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
818 Register("/instances/{id}/simplified-tags", GetInstanceTags<true>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
819 Register("/instances/{id}/frames", ListFrames); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
820 |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
821 Register("/instances/{id}/frames/{frame}/preview", GetImage<ImageExtractionMode_Preview>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
822 Register("/instances/{id}/frames/{frame}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
823 Register("/instances/{id}/frames/{frame}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
824 Register("/instances/{id}/frames/{frame}/image-int16", GetImage<ImageExtractionMode_Int16>); |
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
825 Register("/instances/{id}/frames/{frame}/matlab", GetMatlabImage); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
826 Register("/instances/{id}/preview", GetImage<ImageExtractionMode_Preview>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
827 Register("/instances/{id}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
828 Register("/instances/{id}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
829 Register("/instances/{id}/image-int16", GetImage<ImageExtractionMode_Int16>); |
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
830 Register("/instances/{id}/matlab", GetMatlabImage); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
831 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
832 Register("/patients/{id}/protected", IsProtectedPatient); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
833 Register("/patients/{id}/protected", SetPatientProtection); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
834 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
835 Register("/{resourceType}/{id}/metadata", ListMetadata); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
836 Register("/{resourceType}/{id}/metadata/{name}", DeleteMetadata); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
837 Register("/{resourceType}/{id}/metadata/{name}", GetMetadata); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
838 Register("/{resourceType}/{id}/metadata/{name}", SetMetadata); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
839 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
840 Register("/{resourceType}/{id}/attachments", ListAttachments); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
841 Register("/{resourceType}/{id}/attachments/{name}", DeleteAttachment); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
842 Register("/{resourceType}/{id}/attachments/{name}", GetAttachmentOperations); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
843 Register("/{resourceType}/{id}/attachments/{name}/compressed-data", GetAttachmentData<0>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
844 Register("/{resourceType}/{id}/attachments/{name}/compressed-md5", GetAttachmentCompressedMD5); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
845 Register("/{resourceType}/{id}/attachments/{name}/compressed-size", GetAttachmentCompressedSize); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
846 Register("/{resourceType}/{id}/attachments/{name}/data", GetAttachmentData<1>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
847 Register("/{resourceType}/{id}/attachments/{name}/md5", GetAttachmentMD5); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
848 Register("/{resourceType}/{id}/attachments/{name}/size", GetAttachmentSize); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
849 Register("/{resourceType}/{id}/attachments/{name}/verify-md5", VerifyAttachment); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
850 Register("/{resourceType}/{id}/attachments/{name}", UploadAttachment); |
782 | 851 |
852 Register("/instances/{id}/content/*", GetRawContent); | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
853 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
854 } |