Mercurial > hg > orthanc
annotate OrthancServer/ServerIndex.cpp @ 1218:efece308018e
report database version in /system
author | Sebastien Jodogne <s.jodogne@gmail.com> |
---|---|
date | Thu, 06 Nov 2014 15:58:13 +0100 |
parents | 1169528a9a5f |
children | 9b4977e3c19d |
rev | line source |
---|---|
0 | 1 /** |
62 | 2 * Orthanc - A Lightweight, RESTful DICOM Store |
689 | 3 * Copyright (C) 2012-2014 Medical Physics Department, CHU of Liege, |
0 | 4 * Belgium |
5 * | |
6 * This program is free software: you can redistribute it and/or | |
7 * modify it under the terms of the GNU General Public License as | |
8 * published by the Free Software Foundation, either version 3 of the | |
9 * License, or (at your option) any later version. | |
136 | 10 * |
11 * In addition, as a special exception, the copyright holders of this | |
12 * program give permission to link the code of its release with the | |
13 * OpenSSL project's "OpenSSL" library (or with modified versions of it | |
14 * that use the same license as the "OpenSSL" library), and distribute | |
15 * the linked executables. You must obey the GNU General Public License | |
16 * in all respects for all of the code used other than "OpenSSL". If you | |
17 * modify file(s) with this exception, you may extend this exception to | |
18 * your version of the file(s), but you are not obligated to do so. If | |
19 * you do not wish to do so, delete this exception statement from your | |
20 * version. If you delete this exception statement from all source files | |
21 * in the program, then also delete it here. | |
0 | 22 * |
23 * This program is distributed in the hope that it will be useful, but | |
24 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
26 * General Public License for more details. | |
27 * | |
28 * You should have received a copy of the GNU General Public License | |
29 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
30 **/ | |
31 | |
32 | |
831
84513f2ee1f3
pch for unit tests and server
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
824
diff
changeset
|
33 #include "PrecompiledHeadersServer.h" |
0 | 34 #include "ServerIndex.h" |
35 | |
6 | 36 #ifndef NOMINMAX |
2 | 37 #define NOMINMAX |
6 | 38 #endif |
39 | |
1198 | 40 #include "ServerIndexChange.h" |
8 | 41 #include "EmbeddedResources.h" |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
42 #include "OrthancInitialization.h" |
0 | 43 #include "../Core/Toolbox.h" |
44 #include "../Core/Uuid.h" | |
45 #include "../Core/DicomFormat/DicomArray.h" | |
46 #include "../Core/SQLite/Transaction.h" | |
47 #include "FromDcmtkBridge.h" | |
226
8a26a8e85edf
refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
224
diff
changeset
|
48 #include "ServerContext.h" |
0 | 49 |
50 #include <boost/lexical_cast.hpp> | |
51 #include <stdio.h> | |
108 | 52 #include <glog/logging.h> |
0 | 53 |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
54 static const uint64_t MEGA_BYTES = 1024 * 1024; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
55 |
62 | 56 namespace Orthanc |
0 | 57 { |
58 namespace Internals | |
59 { | |
202 | 60 class ServerIndexListener : public IServerIndexListener |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
61 { |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
62 private: |
1126
bf67431a7383
handling of file content type in IStorageArea
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1113
diff
changeset
|
63 struct FileToRemove |
bf67431a7383
handling of file content type in IStorageArea
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1113
diff
changeset
|
64 { |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
65 private: |
1126
bf67431a7383
handling of file content type in IStorageArea
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1113
diff
changeset
|
66 std::string uuid_; |
bf67431a7383
handling of file content type in IStorageArea
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1113
diff
changeset
|
67 FileContentType type_; |
bf67431a7383
handling of file content type in IStorageArea
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1113
diff
changeset
|
68 |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
69 public: |
1126
bf67431a7383
handling of file content type in IStorageArea
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1113
diff
changeset
|
70 FileToRemove(const FileInfo& info) : uuid_(info.GetUuid()), |
bf67431a7383
handling of file content type in IStorageArea
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1113
diff
changeset
|
71 type_(info.GetContentType()) |
bf67431a7383
handling of file content type in IStorageArea
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1113
diff
changeset
|
72 { |
bf67431a7383
handling of file content type in IStorageArea
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1113
diff
changeset
|
73 } |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
74 |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
75 const std::string& GetUuid() const |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
76 { |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
77 return uuid_; |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
78 } |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
79 |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
80 FileContentType GetContentType() const |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
81 { |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
82 return type_; |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
83 } |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
84 }; |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
85 |
226
8a26a8e85edf
refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
224
diff
changeset
|
86 ServerContext& context_; |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
87 bool hasRemainingLevel_; |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
88 ResourceType remainingType_; |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
89 std::string remainingPublicId_; |
1126
bf67431a7383
handling of file content type in IStorageArea
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1113
diff
changeset
|
90 std::list<FileToRemove> pendingFilesToRemove_; |
1196 | 91 std::list<ServerIndexChange> pendingChanges_; |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
92 uint64_t sizeOfFilesToRemove_; |
1191
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
93 bool insideTransaction_; |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
94 |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
95 void Reset() |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
96 { |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
97 sizeOfFilesToRemove_ = 0; |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
98 hasRemainingLevel_ = false; |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
99 pendingFilesToRemove_.clear(); |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
100 pendingChanges_.clear(); |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
101 } |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
102 |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
103 public: |
1191
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
104 ServerIndexListener(ServerContext& context) : context_(context), |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
105 insideTransaction_(false) |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
106 { |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
107 Reset(); |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
108 assert(ResourceType_Patient < ResourceType_Study && |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
109 ResourceType_Study < ResourceType_Series && |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
110 ResourceType_Series < ResourceType_Instance); |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
111 } |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
112 |
1191
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
113 void StartTransaction() |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
114 { |
1191
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
115 Reset(); |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
116 insideTransaction_ = true; |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
117 } |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
118 |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
119 void EndTransaction() |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
120 { |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
121 insideTransaction_ = false; |
264
5b8e8b74bc8b
remove files only after the sqlite transaction has succeeded
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
240
diff
changeset
|
122 } |
5b8e8b74bc8b
remove files only after the sqlite transaction has succeeded
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
240
diff
changeset
|
123 |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
124 uint64_t GetSizeOfFilesToRemove() |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
125 { |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
126 return sizeOfFilesToRemove_; |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
127 } |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
128 |
264
5b8e8b74bc8b
remove files only after the sqlite transaction has succeeded
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
240
diff
changeset
|
129 void CommitFilesToRemove() |
5b8e8b74bc8b
remove files only after the sqlite transaction has succeeded
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
240
diff
changeset
|
130 { |
1189
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
131 for (std::list<FileToRemove>::const_iterator |
264
5b8e8b74bc8b
remove files only after the sqlite transaction has succeeded
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
240
diff
changeset
|
132 it = pendingFilesToRemove_.begin(); |
656 | 133 it != pendingFilesToRemove_.end(); ++it) |
264
5b8e8b74bc8b
remove files only after the sqlite transaction has succeeded
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
240
diff
changeset
|
134 { |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
135 context_.RemoveFile(it->GetUuid(), it->GetContentType()); |
264
5b8e8b74bc8b
remove files only after the sqlite transaction has succeeded
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
240
diff
changeset
|
136 } |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
137 } |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
138 |
1189
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
139 void CommitChanges() |
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
140 { |
1196 | 141 for (std::list<ServerIndexChange>::const_iterator |
1189
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
142 it = pendingChanges_.begin(); |
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
143 it != pendingChanges_.end(); it++) |
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
144 { |
1198 | 145 context_.SignalChange(*it); |
1189
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
146 } |
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
147 } |
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
148 |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
149 virtual void SignalRemainingAncestor(ResourceType parentType, |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
150 const std::string& publicId) |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
151 { |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
152 LOG(INFO) << "Remaining ancestor \"" << publicId << "\" (" << parentType << ")"; |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
153 |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
154 if (hasRemainingLevel_) |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
155 { |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
156 if (parentType < remainingType_) |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
157 { |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
158 remainingType_ = parentType; |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
159 remainingPublicId_ = publicId; |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
160 } |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
161 } |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
162 else |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
163 { |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
164 hasRemainingLevel_ = true; |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
165 remainingType_ = parentType; |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
166 remainingPublicId_ = publicId; |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
167 } |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
168 } |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
169 |
273
d384af918264
more detailed signal about deleted file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
272
diff
changeset
|
170 virtual void SignalFileDeleted(const FileInfo& info) |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
171 { |
273
d384af918264
more detailed signal about deleted file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
272
diff
changeset
|
172 assert(Toolbox::IsUuid(info.GetUuid())); |
1126
bf67431a7383
handling of file content type in IStorageArea
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1113
diff
changeset
|
173 pendingFilesToRemove_.push_back(FileToRemove(info)); |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
174 sizeOfFilesToRemove_ += info.GetCompressedSize(); |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
175 } |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
176 |
1198 | 177 virtual void SignalChange(const ServerIndexChange& change) |
1158 | 178 { |
1198 | 179 LOG(INFO) << "Change related to resource " << change.GetPublicId() << " of type " |
180 << EnumerationToString(change.GetResourceType()) << ": " | |
181 << EnumerationToString(change.GetChangeType()); | |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
182 |
1191
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
183 if (insideTransaction_) |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
184 { |
1198 | 185 pendingChanges_.push_back(change); |
1191
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
186 } |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
187 else |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
188 { |
1198 | 189 context_.SignalChange(change); |
1191
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
190 } |
1158 | 191 } |
192 | |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
193 bool HasRemainingLevel() const |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
194 { |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
195 return hasRemainingLevel_; |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
196 } |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
197 |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
198 ResourceType GetRemainingType() const |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
199 { |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
200 assert(HasRemainingLevel()); |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
201 return remainingType_; |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
202 } |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
203 |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
204 const std::string& GetRemainingPublicId() const |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
205 { |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
206 assert(HasRemainingLevel()); |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
207 return remainingPublicId_; |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
208 } |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
209 }; |
0 | 210 } |
211 | |
212 | |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
213 class ServerIndex::Transaction |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
214 { |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
215 private: |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
216 ServerIndex& index_; |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
217 std::auto_ptr<SQLite::Transaction> transaction_; |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
218 bool isCommitted_; |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
219 |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
220 public: |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
221 Transaction(ServerIndex& index) : |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
222 index_(index), |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
223 isCommitted_(false) |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
224 { |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
225 assert(index_.currentStorageSize_ == index_.db_->GetTotalCompressedSize()); |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
226 |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
227 transaction_.reset(index_.db_->StartTransaction()); |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
228 transaction_->Begin(); |
1191
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
229 |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
230 index_.listener_->StartTransaction(); |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
231 } |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
232 |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
233 ~Transaction() |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
234 { |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
235 index_.listener_->EndTransaction(); |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
236 } |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
237 |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
238 void Commit(uint64_t sizeOfAddedFiles) |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
239 { |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
240 if (!isCommitted_) |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
241 { |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
242 transaction_->Commit(); |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
243 |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
244 // We can remove the files once the SQLite transaction has |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
245 // been successfully committed. Some files might have to be |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
246 // deleted because of recycling. |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
247 index_.listener_->CommitFilesToRemove(); |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
248 |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
249 index_.currentStorageSize_ += sizeOfAddedFiles; |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
250 |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
251 assert(index_.currentStorageSize_ >= index_.listener_->GetSizeOfFilesToRemove()); |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
252 index_.currentStorageSize_ -= index_.listener_->GetSizeOfFilesToRemove(); |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
253 |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
254 assert(index_.currentStorageSize_ == index_.db_->GetTotalCompressedSize()); |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
255 |
1189
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
256 // Send all the pending changes to the Orthanc plugins |
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
257 index_.listener_->CommitChanges(); |
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
258 |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
259 isCommitted_ = true; |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
260 } |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
261 } |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
262 }; |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
263 |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
264 |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
265 class ServerIndex::UnstableResourcePayload |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
266 { |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
267 private: |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
268 ResourceType type_; |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
269 std::string publicId_; |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
270 boost::posix_time::ptime time_; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
271 |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
272 public: |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
273 UnstableResourcePayload() : type_(ResourceType_Instance) |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
274 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
275 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
276 |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
277 UnstableResourcePayload(Orthanc::ResourceType type, |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
278 const std::string& publicId) : |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
279 type_(type), |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
280 publicId_(publicId) |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
281 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
282 time_ = boost::posix_time::second_clock::local_time(); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
283 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
284 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
285 unsigned int GetAge() const |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
286 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
287 return (boost::posix_time::second_clock::local_time() - time_).total_seconds(); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
288 } |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
289 |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
290 ResourceType GetResourceType() const |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
291 { |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
292 return type_; |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
293 } |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
294 |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
295 const std::string& GetPublicId() const |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
296 { |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
297 return publicId_; |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
298 } |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
299 }; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
300 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
301 |
212 | 302 bool ServerIndex::DeleteResource(Json::Value& target, |
0 | 303 const std::string& uuid, |
202 | 304 ResourceType expectedType) |
0 | 305 { |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
306 boost::mutex::scoped_lock lock(mutex_); |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
307 |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
308 Transaction t(*this); |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
309 |
202 | 310 int64_t id; |
311 ResourceType type; | |
312 if (!db_->LookupResource(uuid, id, type) || | |
313 expectedType != type) | |
0 | 314 { |
315 return false; | |
316 } | |
202 | 317 |
318 db_->DeleteResource(id); | |
0 | 319 |
202 | 320 if (listener_->HasRemainingLevel()) |
0 | 321 { |
202 | 322 ResourceType type = listener_->GetRemainingType(); |
323 const std::string& uuid = listener_->GetRemainingPublicId(); | |
0 | 324 |
325 target["RemainingAncestor"] = Json::Value(Json::objectValue); | |
204 | 326 target["RemainingAncestor"]["Path"] = GetBasePath(type, uuid); |
434
ccf3a0a43dac
EnumerationDictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
327 target["RemainingAncestor"]["Type"] = EnumerationToString(type); |
0 | 328 target["RemainingAncestor"]["ID"] = uuid; |
329 } | |
330 else | |
331 { | |
332 target["RemainingAncestor"] = Json::nullValue; | |
333 } | |
334 | |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
335 t.Commit(0); |
264
5b8e8b74bc8b
remove files only after the sqlite transaction has succeeded
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
240
diff
changeset
|
336 |
0 | 337 return true; |
338 } | |
339 | |
340 | |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
341 void ServerIndex::FlushThread(ServerIndex* that) |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
342 { |
1102
ce6386b37afd
avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1006
diff
changeset
|
343 // By default, wait for 10 seconds before flushing |
ce6386b37afd
avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1006
diff
changeset
|
344 unsigned int sleep = 10; |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
345 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
346 try |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
347 { |
744 | 348 boost::mutex::scoped_lock lock(that->mutex_); |
1218
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
349 std::string sleepString = that->db_->GetGlobalProperty(GlobalProperty_FlushSleep, ""); |
1102
ce6386b37afd
avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1006
diff
changeset
|
350 |
ce6386b37afd
avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1006
diff
changeset
|
351 if (Toolbox::IsInteger(sleepString)) |
ce6386b37afd
avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1006
diff
changeset
|
352 { |
ce6386b37afd
avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1006
diff
changeset
|
353 sleep = boost::lexical_cast<unsigned int>(sleepString); |
ce6386b37afd
avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1006
diff
changeset
|
354 } |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
355 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
356 catch (boost::bad_lexical_cast&) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
357 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
358 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
359 |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
360 LOG(INFO) << "Starting the database flushing thread (sleep = " << sleep << ")"; |
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
361 |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
362 unsigned int count = 0; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
363 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
364 while (!that->done_) |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
365 { |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
366 boost::this_thread::sleep(boost::posix_time::seconds(1)); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
367 count++; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
368 if (count < sleep) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
369 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
370 continue; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
371 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
372 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
373 boost::mutex::scoped_lock lock(that->mutex_); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
374 that->db_->FlushToDisk(); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
375 count = 0; |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
376 } |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
377 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
378 LOG(INFO) << "Stopping the database flushing thread"; |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
379 } |
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
380 |
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
381 |
433 | 382 static void ComputeExpectedNumberOfInstances(DatabaseWrapper& db, |
383 int64_t series, | |
384 const DicomMap& dicomSummary) | |
385 { | |
386 try | |
387 { | |
656 | 388 const DicomValue* value; |
389 const DicomValue* value2; | |
390 | |
433 | 391 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_IMAGES_IN_ACQUISITION)) != NULL && |
392 (value2 = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_TEMPORAL_POSITIONS)) != NULL) | |
393 { | |
394 // Patch for series with temporal positions thanks to Will Ryder | |
395 int64_t imagesInAcquisition = boost::lexical_cast<int64_t>(value->AsString()); | |
396 int64_t countTemporalPositions = boost::lexical_cast<int64_t>(value2->AsString()); | |
397 std::string expected = boost::lexical_cast<std::string>(imagesInAcquisition * countTemporalPositions); | |
398 db.SetMetadata(series, MetadataType_Series_ExpectedNumberOfInstances, expected); | |
399 } | |
400 | |
401 else if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_SLICES)) != NULL && | |
402 (value2 = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_TIME_SLICES)) != NULL) | |
403 { | |
404 // Support of Cardio-PET images | |
405 int64_t numberOfSlices = boost::lexical_cast<int64_t>(value->AsString()); | |
406 int64_t numberOfTimeSlices = boost::lexical_cast<int64_t>(value2->AsString()); | |
407 std::string expected = boost::lexical_cast<std::string>(numberOfSlices * numberOfTimeSlices); | |
408 db.SetMetadata(series, MetadataType_Series_ExpectedNumberOfInstances, expected); | |
409 } | |
410 | |
411 else if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES)) != NULL) | |
412 { | |
413 db.SetMetadata(series, MetadataType_Series_ExpectedNumberOfInstances, value->AsString()); | |
414 } | |
415 } | |
416 catch (boost::bad_lexical_cast) | |
417 { | |
418 } | |
419 } | |
420 | |
421 | |
226
8a26a8e85edf
refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
224
diff
changeset
|
422 ServerIndex::ServerIndex(ServerContext& context, |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
423 const std::string& dbPath) : |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
424 done_(false), |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
425 maximumStorageSize_(0), |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
426 maximumPatients_(0) |
186
f68c039b0571
preparing refactoring of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
180
diff
changeset
|
427 { |
226
8a26a8e85edf
refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
224
diff
changeset
|
428 listener_.reset(new Internals::ServerIndexListener(context)); |
186
f68c039b0571
preparing refactoring of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
180
diff
changeset
|
429 |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
430 if (dbPath == ":memory:") |
180
626777d01dc4
use of hashes to index dicom objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
179
diff
changeset
|
431 { |
202 | 432 db_.reset(new DatabaseWrapper(*listener_)); |
180
626777d01dc4
use of hashes to index dicom objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
179
diff
changeset
|
433 } |
626777d01dc4
use of hashes to index dicom objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
179
diff
changeset
|
434 else |
0 | 435 { |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
436 boost::filesystem::path p = dbPath; |
180
626777d01dc4
use of hashes to index dicom objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
179
diff
changeset
|
437 |
626777d01dc4
use of hashes to index dicom objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
179
diff
changeset
|
438 try |
626777d01dc4
use of hashes to index dicom objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
179
diff
changeset
|
439 { |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
440 boost::filesystem::create_directories(p); |
180
626777d01dc4
use of hashes to index dicom objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
179
diff
changeset
|
441 } |
626777d01dc4
use of hashes to index dicom objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
179
diff
changeset
|
442 catch (boost::filesystem::filesystem_error) |
626777d01dc4
use of hashes to index dicom objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
179
diff
changeset
|
443 { |
626777d01dc4
use of hashes to index dicom objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
179
diff
changeset
|
444 } |
626777d01dc4
use of hashes to index dicom objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
179
diff
changeset
|
445 |
202 | 446 db_.reset(new DatabaseWrapper(p.string() + "/index", *listener_)); |
0 | 447 } |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
448 |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
449 currentStorageSize_ = db_->GetTotalCompressedSize(); |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
450 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
451 // Initial recycling if the parameters have changed since the last |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
452 // execution of Orthanc |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
453 StandaloneRecycling(); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
454 |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
455 flushThread_ = boost::thread(FlushThread, this); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
456 unstableResourcesMonitorThread_ = boost::thread(UnstableResourcesMonitorThread, this); |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
457 } |
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
458 |
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
459 |
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
460 ServerIndex::~ServerIndex() |
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
461 { |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
462 done_ = true; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
463 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
464 if (flushThread_.joinable()) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
465 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
466 flushThread_.join(); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
467 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
468 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
469 if (unstableResourcesMonitorThread_.joinable()) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
470 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
471 unstableResourcesMonitorThread_.join(); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
472 } |
0 | 473 } |
474 | |
475 | |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
476 StoreStatus ServerIndex::Store(std::map<MetadataType, std::string>& instanceMetadata, |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
477 const DicomMap& dicomSummary, |
232
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
478 const Attachments& attachments, |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
479 const std::string& remoteAet, |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
480 const MetadataMap& metadata) |
0 | 481 { |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
482 boost::mutex::scoped_lock lock(mutex_); |
0 | 483 |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
484 instanceMetadata.clear(); |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
485 |
178 | 486 DicomInstanceHasher hasher(dicomSummary); |
0 | 487 |
488 try | |
489 { | |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
490 Transaction t(*this); |
0 | 491 |
202 | 492 // Do nothing if the instance already exists |
0 | 493 { |
432 | 494 ResourceType type; |
495 int64_t tmp; | |
496 if (db_->LookupResource(hasher.HashInstance(), tmp, type)) | |
497 { | |
498 assert(type == ResourceType_Instance); | |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
499 db_->GetAllMetadata(instanceMetadata, tmp); |
432 | 500 return StoreStatus_AlreadyStored; |
501 } | |
0 | 502 } |
503 | |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
504 // Ensure there is enough room in the storage for the new instance |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
505 uint64_t instanceSize = 0; |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
506 for (Attachments::const_iterator it = attachments.begin(); |
656 | 507 it != attachments.end(); ++it) |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
508 { |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
509 instanceSize += it->GetCompressedSize(); |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
510 } |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
511 |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
512 Recycle(instanceSize, hasher.HashPatient()); |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
513 |
202 | 514 // Create the instance |
432 | 515 int64_t instance = db_->CreateResource(hasher.HashInstance(), ResourceType_Instance); |
202 | 516 |
517 DicomMap dicom; | |
518 dicomSummary.ExtractInstanceInformation(dicom); | |
519 db_->SetMainDicomTags(instance, dicom); | |
520 | |
432 | 521 // Detect up to which level the patient/study/series/instance |
522 // hierarchy must be created | |
523 int64_t patient = -1, study = -1, series = -1; | |
524 bool isNewPatient = false; | |
525 bool isNewStudy = false; | |
526 bool isNewSeries = false; | |
527 | |
0 | 528 { |
432 | 529 ResourceType dummy; |
530 | |
531 if (db_->LookupResource(hasher.HashSeries(), series, dummy)) | |
532 { | |
533 assert(dummy == ResourceType_Series); | |
534 // The patient, the study and the series already exist | |
535 | |
536 bool ok = (db_->LookupResource(hasher.HashPatient(), patient, dummy) && | |
537 db_->LookupResource(hasher.HashStudy(), study, dummy)); | |
538 assert(ok); | |
539 } | |
540 else if (db_->LookupResource(hasher.HashStudy(), study, dummy)) | |
541 { | |
542 assert(dummy == ResourceType_Study); | |
543 | |
544 // New series: The patient and the study already exist | |
545 isNewSeries = true; | |
546 | |
547 bool ok = db_->LookupResource(hasher.HashPatient(), patient, dummy); | |
548 assert(ok); | |
549 } | |
550 else if (db_->LookupResource(hasher.HashPatient(), patient, dummy)) | |
551 { | |
552 assert(dummy == ResourceType_Patient); | |
553 | |
554 // New study and series: The patient already exist | |
555 isNewStudy = true; | |
556 isNewSeries = true; | |
557 } | |
558 else | |
559 { | |
560 // New patient, study and series: Nothing exists | |
561 isNewPatient = true; | |
562 isNewStudy = true; | |
563 isNewSeries = true; | |
564 } | |
565 } | |
566 | |
567 // Create the series if needed | |
568 if (isNewSeries) | |
569 { | |
202 | 570 series = db_->CreateResource(hasher.HashSeries(), ResourceType_Series); |
571 dicomSummary.ExtractSeriesInformation(dicom); | |
572 db_->SetMainDicomTags(series, dicom); | |
432 | 573 } |
202 | 574 |
432 | 575 // Create the study if needed |
576 if (isNewStudy) | |
577 { | |
578 study = db_->CreateResource(hasher.HashStudy(), ResourceType_Study); | |
579 dicomSummary.ExtractStudyInformation(dicom); | |
580 db_->SetMainDicomTags(study, dicom); | |
581 } | |
582 | |
583 // Create the patient if needed | |
584 if (isNewPatient) | |
585 { | |
586 patient = db_->CreateResource(hasher.HashPatient(), ResourceType_Patient); | |
587 dicomSummary.ExtractPatientInformation(dicom); | |
588 db_->SetMainDicomTags(patient, dicom); | |
589 } | |
202 | 590 |
432 | 591 // Create the parent-to-child links |
592 db_->AttachChild(series, instance); | |
593 | |
594 if (isNewSeries) | |
595 { | |
596 db_->AttachChild(study, series); | |
0 | 597 } |
432 | 598 |
599 if (isNewStudy) | |
0 | 600 { |
432 | 601 db_->AttachChild(patient, study); |
0 | 602 } |
603 | |
432 | 604 // Sanity checks |
605 assert(patient != -1); | |
606 assert(study != -1); | |
607 assert(series != -1); | |
608 assert(instance != -1); | |
609 | |
202 | 610 // Attach the files to the newly created instance |
232
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
611 for (Attachments::const_iterator it = attachments.begin(); |
656 | 612 it != attachments.end(); ++it) |
232
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
613 { |
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
614 db_->AddAttachment(instance, *it); |
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
615 } |
202 | 616 |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
617 // Attach the user-specified metadata |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
618 for (MetadataMap::const_iterator |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
619 it = metadata.begin(); it != metadata.end(); ++it) |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
620 { |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
621 switch (it->first.first) |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
622 { |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
623 case ResourceType_Patient: |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
624 db_->SetMetadata(patient, it->first.second, it->second); |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
625 break; |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
626 |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
627 case ResourceType_Study: |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
628 db_->SetMetadata(study, it->first.second, it->second); |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
629 break; |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
630 |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
631 case ResourceType_Series: |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
632 db_->SetMetadata(series, it->first.second, it->second); |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
633 break; |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
634 |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
635 case ResourceType_Instance: |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
636 db_->SetMetadata(instance, it->first.second, it->second); |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
637 instanceMetadata[it->first.second] = it->second; |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
638 break; |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
639 |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
640 default: |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
641 throw OrthancException(ErrorCode_ParameterOutOfRange); |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
642 } |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
643 } |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
644 |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
645 // Attach the auto-computed metadata for the patient/study/series levels |
432 | 646 std::string now = Toolbox::GetNowIsoString(); |
647 db_->SetMetadata(series, MetadataType_LastUpdate, now); | |
648 db_->SetMetadata(study, MetadataType_LastUpdate, now); | |
649 db_->SetMetadata(patient, MetadataType_LastUpdate, now); | |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
650 |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
651 // Attach the auto-computed metadata for the instance level, |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
652 // reflecting these additions into the input metadata map |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
653 db_->SetMetadata(instance, MetadataType_Instance_ReceptionDate, now); |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
654 instanceMetadata[MetadataType_Instance_ReceptionDate] = now; |
202 | 655 |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
656 db_->SetMetadata(instance, MetadataType_Instance_RemoteAet, remoteAet); |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
657 instanceMetadata[MetadataType_Instance_RemoteAet] = remoteAet; |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
658 |
202 | 659 const DicomValue* value; |
660 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_INSTANCE_NUMBER)) != NULL || | |
661 (value = dicomSummary.TestAndGetValue(DICOM_TAG_IMAGE_INDEX)) != NULL) | |
0 | 662 { |
202 | 663 db_->SetMetadata(instance, MetadataType_Instance_IndexInSeries, value->AsString()); |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
664 instanceMetadata[MetadataType_Instance_IndexInSeries] = value->AsString(); |
0 | 665 } |
666 | |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
667 // Check whether the series of this new instance is now completed |
202 | 668 if (isNewSeries) |
669 { | |
433 | 670 ComputeExpectedNumberOfInstances(*db_, series, dicomSummary); |
202 | 671 } |
672 | |
205
6ab754744446
logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
204
diff
changeset
|
673 SeriesStatus seriesStatus = GetSeriesStatus(series); |
6ab754744446
logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
204
diff
changeset
|
674 if (seriesStatus == SeriesStatus_Complete) |
6ab754744446
logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
204
diff
changeset
|
675 { |
1198 | 676 db_->LogChange(series, ChangeType_CompletedSeries, ResourceType_Series, hasher.HashSeries()); |
205
6ab754744446
logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
204
diff
changeset
|
677 } |
6ab754744446
logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
204
diff
changeset
|
678 |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
679 // Mark the parent resources of this instance as unstable |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
680 MarkAsUnstable(series, ResourceType_Series, hasher.HashSeries()); |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
681 MarkAsUnstable(study, ResourceType_Study, hasher.HashStudy()); |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
682 MarkAsUnstable(patient, ResourceType_Patient, hasher.HashPatient()); |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
683 |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
684 t.Commit(instanceSize); |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
685 |
0 | 686 return StoreStatus_Success; |
687 } | |
62 | 688 catch (OrthancException& e) |
0 | 689 { |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
690 LOG(ERROR) << "EXCEPTION [" << e.What() << "]" |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
691 << " (SQLite status: " << db_->GetErrorMessage() << ")"; |
0 | 692 } |
693 | |
694 return StoreStatus_Failure; | |
695 } | |
696 | |
697 | |
238 | 698 void ServerIndex::ComputeStatistics(Json::Value& target) |
0 | 699 { |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
700 boost::mutex::scoped_lock lock(mutex_); |
238 | 701 target = Json::objectValue; |
0 | 702 |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
703 uint64_t cs = currentStorageSize_; |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
704 assert(cs == db_->GetTotalCompressedSize()); |
238 | 705 uint64_t us = db_->GetTotalUncompressedSize(); |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
706 target["TotalDiskSize"] = boost::lexical_cast<std::string>(cs); |
238 | 707 target["TotalUncompressedSize"] = boost::lexical_cast<std::string>(us); |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
708 target["TotalDiskSizeMB"] = boost::lexical_cast<unsigned int>(cs / MEGA_BYTES); |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
709 target["TotalUncompressedSizeMB"] = boost::lexical_cast<unsigned int>(us / MEGA_BYTES); |
238 | 710 |
711 target["CountPatients"] = static_cast<unsigned int>(db_->GetResourceCount(ResourceType_Patient)); | |
712 target["CountStudies"] = static_cast<unsigned int>(db_->GetResourceCount(ResourceType_Study)); | |
713 target["CountSeries"] = static_cast<unsigned int>(db_->GetResourceCount(ResourceType_Series)); | |
714 target["CountInstances"] = static_cast<unsigned int>(db_->GetResourceCount(ResourceType_Instance)); | |
715 } | |
716 | |
187
8e673a65564d
refactoring of storing new instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
186
diff
changeset
|
717 |
8e673a65564d
refactoring of storing new instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
186
diff
changeset
|
718 |
585 | 719 SeriesStatus ServerIndex::GetSeriesStatus(int64_t id) |
199 | 720 { |
721 // Get the expected number of instances in this series (from the metadata) | |
202 | 722 std::string s = db_->GetMetadata(id, MetadataType_Series_ExpectedNumberOfInstances); |
199 | 723 |
724 size_t expected; | |
725 try | |
726 { | |
727 expected = boost::lexical_cast<size_t>(s); | |
728 } | |
729 catch (boost::bad_lexical_cast&) | |
730 { | |
731 return SeriesStatus_Unknown; | |
732 } | |
733 | |
734 // Loop over the instances of this series | |
735 std::list<int64_t> children; | |
202 | 736 db_->GetChildrenInternalId(children, id); |
199 | 737 |
738 std::set<size_t> instances; | |
739 for (std::list<int64_t>::const_iterator | |
656 | 740 it = children.begin(); it != children.end(); ++it) |
199 | 741 { |
742 // Get the index of this instance in the series | |
202 | 743 s = db_->GetMetadata(*it, MetadataType_Instance_IndexInSeries); |
199 | 744 size_t index; |
745 try | |
746 { | |
747 index = boost::lexical_cast<size_t>(s); | |
748 } | |
749 catch (boost::bad_lexical_cast&) | |
750 { | |
751 return SeriesStatus_Unknown; | |
752 } | |
753 | |
656 | 754 if (!(index > 0 && index <= expected)) |
199 | 755 { |
756 // Out-of-range instance index | |
757 return SeriesStatus_Inconsistent; | |
758 } | |
759 | |
760 if (instances.find(index) != instances.end()) | |
761 { | |
762 // Twice the same instance index | |
763 return SeriesStatus_Inconsistent; | |
764 } | |
765 | |
766 instances.insert(index); | |
767 } | |
768 | |
769 if (instances.size() == expected) | |
770 { | |
771 return SeriesStatus_Complete; | |
772 } | |
773 else | |
774 { | |
775 return SeriesStatus_Missing; | |
776 } | |
777 } | |
778 | |
779 | |
780 | |
202 | 781 void ServerIndex::MainDicomTagsToJson(Json::Value& target, |
782 int64_t resourceId) | |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
783 { |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
784 DicomMap tags; |
202 | 785 db_->GetMainDicomTags(tags, resourceId); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
786 target["MainDicomTags"] = Json::objectValue; |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
787 FromDcmtkBridge::ToJson(target["MainDicomTags"], tags); |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
788 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
789 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
790 bool ServerIndex::LookupResource(Json::Value& result, |
199 | 791 const std::string& publicId, |
792 ResourceType expectedType) | |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
793 { |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
794 result = Json::objectValue; |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
795 |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
796 boost::mutex::scoped_lock lock(mutex_); |
199 | 797 |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
798 // Lookup for the requested resource |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
799 int64_t id; |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
800 ResourceType type; |
202 | 801 if (!db_->LookupResource(publicId, id, type) || |
199 | 802 type != expectedType) |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
803 { |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
804 return false; |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
805 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
806 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
807 // Find the parent resource (if it exists) |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
808 if (type != ResourceType_Patient) |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
809 { |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
810 int64_t parentId; |
202 | 811 if (!db_->LookupParent(parentId, id)) |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
812 { |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
813 throw OrthancException(ErrorCode_InternalError); |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
814 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
815 |
202 | 816 std::string parent = db_->GetPublicId(parentId); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
817 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
818 switch (type) |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
819 { |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
820 case ResourceType_Study: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
821 result["ParentPatient"] = parent; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
822 break; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
823 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
824 case ResourceType_Series: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
825 result["ParentStudy"] = parent; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
826 break; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
827 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
828 case ResourceType_Instance: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
829 result["ParentSeries"] = parent; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
830 break; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
831 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
832 default: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
833 throw OrthancException(ErrorCode_InternalError); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
834 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
835 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
836 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
837 // List the children resources |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
838 std::list<std::string> children; |
202 | 839 db_->GetChildrenPublicId(children, id); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
840 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
841 if (type != ResourceType_Instance) |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
842 { |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
843 Json::Value c = Json::arrayValue; |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
844 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
845 for (std::list<std::string>::const_iterator |
656 | 846 it = children.begin(); it != children.end(); ++it) |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
847 { |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
848 c.append(*it); |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
849 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
850 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
851 switch (type) |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
852 { |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
853 case ResourceType_Patient: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
854 result["Studies"] = c; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
855 break; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
856 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
857 case ResourceType_Study: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
858 result["Series"] = c; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
859 break; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
860 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
861 case ResourceType_Series: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
862 result["Instances"] = c; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
863 break; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
864 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
865 default: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
866 throw OrthancException(ErrorCode_InternalError); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
867 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
868 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
869 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
870 // Set the resource type |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
871 switch (type) |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
872 { |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
873 case ResourceType_Patient: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
874 result["Type"] = "Patient"; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
875 break; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
876 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
877 case ResourceType_Study: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
878 result["Type"] = "Study"; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
879 break; |
199 | 880 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
881 case ResourceType_Series: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
882 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
883 result["Type"] = "Series"; |
434
ccf3a0a43dac
EnumerationDictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
884 result["Status"] = EnumerationToString(GetSeriesStatus(id)); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
885 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
886 int i; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
887 if (db_->GetMetadataAsInteger(i, id, MetadataType_Series_ExpectedNumberOfInstances)) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
888 result["ExpectedNumberOfInstances"] = i; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
889 else |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
890 result["ExpectedNumberOfInstances"] = Json::nullValue; |
200
9c58b2b03cf0
refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
199
diff
changeset
|
891 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
892 break; |
200
9c58b2b03cf0
refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
199
diff
changeset
|
893 } |
9c58b2b03cf0
refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
199
diff
changeset
|
894 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
895 case ResourceType_Instance: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
896 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
897 result["Type"] = "Instance"; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
898 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
899 FileInfo attachment; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
900 if (!db_->LookupAttachment(attachment, id, FileContentType_Dicom)) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
901 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
902 throw OrthancException(ErrorCode_InternalError); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
903 } |
200
9c58b2b03cf0
refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
199
diff
changeset
|
904 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
905 result["FileSize"] = static_cast<unsigned int>(attachment.GetUncompressedSize()); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
906 result["FileUuid"] = attachment.GetUuid(); |
200
9c58b2b03cf0
refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
199
diff
changeset
|
907 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
908 int i; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
909 if (db_->GetMetadataAsInteger(i, id, MetadataType_Instance_IndexInSeries)) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
910 result["IndexInSeries"] = i; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
911 else |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
912 result["IndexInSeries"] = Json::nullValue; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
913 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
914 break; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
915 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
916 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
917 default: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
918 throw OrthancException(ErrorCode_InternalError); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
919 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
920 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
921 // Record the remaining information |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
922 result["ID"] = publicId; |
202 | 923 MainDicomTagsToJson(result, id); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
924 |
315 | 925 std::string tmp; |
926 | |
927 tmp = db_->GetMetadata(id, MetadataType_AnonymizedFrom); | |
928 if (tmp.size() != 0) | |
929 result["AnonymizedFrom"] = tmp; | |
930 | |
931 tmp = db_->GetMetadata(id, MetadataType_ModifiedFrom); | |
932 if (tmp.size() != 0) | |
933 result["ModifiedFrom"] = tmp; | |
934 | |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
935 if (type == ResourceType_Patient || |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
936 type == ResourceType_Study || |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
937 type == ResourceType_Series) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
938 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
939 result["IsStable"] = !unstableResources_.Contains(id); |
1148
ac36589f699e
LastUpdate metadata is now always returned for patients, studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
940 |
ac36589f699e
LastUpdate metadata is now always returned for patients, studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
941 tmp = db_->GetMetadata(id, MetadataType_LastUpdate); |
ac36589f699e
LastUpdate metadata is now always returned for patients, studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
942 if (tmp.size() != 0) |
ac36589f699e
LastUpdate metadata is now always returned for patients, studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
943 result["LastUpdate"] = tmp; |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
944 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
945 |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
946 return true; |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
947 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
948 |
0 | 949 |
232
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
950 bool ServerIndex::LookupAttachment(FileInfo& attachment, |
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
951 const std::string& instanceUuid, |
233 | 952 FileContentType contentType) |
0 | 953 { |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
954 boost::mutex::scoped_lock lock(mutex_); |
0 | 955 |
193
a1b9d1e1497b
failed attempt to compile with linux standard base
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
956 int64_t id; |
a1b9d1e1497b
failed attempt to compile with linux standard base
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
957 ResourceType type; |
701 | 958 if (!db_->LookupResource(instanceUuid, id, type)) |
192
c56dc32266e0
refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
191
diff
changeset
|
959 { |
1113
ba5c0908600c
Refactoring of HttpOutput ("Content-Length" header is now always sent)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1102
diff
changeset
|
960 throw OrthancException(ErrorCode_UnknownResource); |
192
c56dc32266e0
refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
191
diff
changeset
|
961 } |
193
a1b9d1e1497b
failed attempt to compile with linux standard base
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
962 |
232
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
963 if (db_->LookupAttachment(attachment, id, contentType)) |
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
964 { |
233 | 965 assert(attachment.GetContentType() == contentType); |
232
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
966 return true; |
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
967 } |
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
968 else |
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
969 { |
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
970 return false; |
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
971 } |
192
c56dc32266e0
refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
191
diff
changeset
|
972 } |
c56dc32266e0
refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
191
diff
changeset
|
973 |
c56dc32266e0
refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
191
diff
changeset
|
974 |
c56dc32266e0
refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
191
diff
changeset
|
975 |
0 | 976 void ServerIndex::GetAllUuids(Json::Value& target, |
190 | 977 ResourceType resourceType) |
0 | 978 { |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
979 boost::mutex::scoped_lock lock(mutex_); |
202 | 980 db_->GetAllPublicIds(target, resourceType); |
0 | 981 } |
982 | |
983 | |
984 bool ServerIndex::GetChanges(Json::Value& target, | |
204 | 985 int64_t since, |
0 | 986 unsigned int maxResults) |
987 { | |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
988 boost::mutex::scoped_lock lock(mutex_); |
237
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
989 db_->GetChanges(target, since, maxResults); |
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
990 return true; |
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
991 } |
0 | 992 |
237
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
993 bool ServerIndex::GetLastChange(Json::Value& target) |
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
994 { |
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
995 boost::mutex::scoped_lock lock(mutex_); |
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
996 db_->GetLastChange(target); |
204 | 997 return true; |
0 | 998 } |
231 | 999 |
1000 void ServerIndex::LogExportedResource(const std::string& publicId, | |
1001 const std::string& remoteModality) | |
1002 { | |
1003 boost::mutex::scoped_lock lock(mutex_); | |
1004 | |
1005 int64_t id; | |
1006 ResourceType type; | |
1007 if (!db_->LookupResource(publicId, id, type)) | |
1008 { | |
1009 throw OrthancException(ErrorCode_InternalError); | |
1010 } | |
1011 | |
1012 std::string patientId; | |
1013 std::string studyInstanceUid; | |
1014 std::string seriesInstanceUid; | |
1015 std::string sopInstanceUid; | |
1016 | |
1017 int64_t currentId = id; | |
1018 ResourceType currentType = type; | |
1019 | |
1020 // Iteratively go up inside the patient/study/series/instance hierarchy | |
1021 bool done = false; | |
1022 while (!done) | |
1023 { | |
1024 DicomMap map; | |
1025 db_->GetMainDicomTags(map, currentId); | |
1026 | |
1027 switch (currentType) | |
1028 { | |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1029 case ResourceType_Patient: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1030 patientId = map.GetValue(DICOM_TAG_PATIENT_ID).AsString(); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1031 done = true; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1032 break; |
231 | 1033 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1034 case ResourceType_Study: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1035 studyInstanceUid = map.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).AsString(); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1036 currentType = ResourceType_Patient; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1037 break; |
231 | 1038 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1039 case ResourceType_Series: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1040 seriesInstanceUid = map.GetValue(DICOM_TAG_SERIES_INSTANCE_UID).AsString(); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1041 currentType = ResourceType_Study; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1042 break; |
231 | 1043 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1044 case ResourceType_Instance: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1045 sopInstanceUid = map.GetValue(DICOM_TAG_SOP_INSTANCE_UID).AsString(); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1046 currentType = ResourceType_Series; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1047 break; |
231 | 1048 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1049 default: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1050 throw OrthancException(ErrorCode_InternalError); |
231 | 1051 } |
1052 | |
1053 // If we have not reached the Patient level, find the parent of | |
1054 // the current resource | |
1055 if (!done) | |
1056 { | |
375
d1ea72f1c967
major fix of storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
315
diff
changeset
|
1057 bool ok = db_->LookupParent(currentId, currentId); |
d1ea72f1c967
major fix of storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
315
diff
changeset
|
1058 assert(ok); |
231 | 1059 } |
1060 } | |
1061 | |
1062 // No need for a SQLite::Transaction here, as we only insert 1 record | |
1063 db_->LogExportedResource(type, | |
1064 publicId, | |
1065 remoteModality, | |
1066 patientId, | |
1067 studyInstanceUid, | |
1068 seriesInstanceUid, | |
1069 sopInstanceUid); | |
1070 } | |
1071 | |
1072 | |
1073 bool ServerIndex::GetExportedResources(Json::Value& target, | |
1074 int64_t since, | |
1075 unsigned int maxResults) | |
1076 { | |
1077 boost::mutex::scoped_lock lock(mutex_); | |
1078 db_->GetExportedResources(target, since, maxResults); | |
1079 return true; | |
1080 } | |
237
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
1081 |
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
1082 bool ServerIndex::GetLastExportedResource(Json::Value& target) |
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
1083 { |
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
1084 boost::mutex::scoped_lock lock(mutex_); |
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
1085 db_->GetLastExportedResource(target); |
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
1086 return true; |
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
1087 } |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1088 |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1089 |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1090 bool ServerIndex::IsRecyclingNeeded(uint64_t instanceSize) |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1091 { |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1092 if (maximumStorageSize_ != 0) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1093 { |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
1094 uint64_t currentSize = currentStorageSize_ - listener_->GetSizeOfFilesToRemove(); |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
1095 assert(db_->GetTotalCompressedSize() == currentSize); |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
1096 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1097 if (currentSize + instanceSize > maximumStorageSize_) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1098 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1099 return true; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1100 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1101 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1102 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1103 if (maximumPatients_ != 0) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1104 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1105 uint64_t patientCount = db_->GetResourceCount(ResourceType_Patient); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1106 if (patientCount > maximumPatients_) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1107 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1108 return true; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1109 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1110 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1111 |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1112 return false; |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1113 } |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1114 |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1115 |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1116 void ServerIndex::Recycle(uint64_t instanceSize, |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1117 const std::string& newPatientId) |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1118 { |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1119 if (!IsRecyclingNeeded(instanceSize)) |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1120 { |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1121 return; |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1122 } |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1123 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1124 // Check whether other DICOM instances from this patient are |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1125 // already stored |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1126 int64_t patientToAvoid; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1127 ResourceType type; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1128 bool hasPatientToAvoid = db_->LookupResource(newPatientId, patientToAvoid, type); |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1129 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1130 if (hasPatientToAvoid && type != ResourceType_Patient) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1131 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1132 throw OrthancException(ErrorCode_InternalError); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1133 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1134 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1135 // Iteratively select patient to remove until there is enough |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1136 // space in the DICOM store |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1137 int64_t patientToRecycle; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1138 while (true) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1139 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1140 // If other instances of this patient are already in the store, |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1141 // we must avoid to recycle them |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1142 bool ok = hasPatientToAvoid ? |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1143 db_->SelectPatientToRecycle(patientToRecycle, patientToAvoid) : |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1144 db_->SelectPatientToRecycle(patientToRecycle); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1145 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1146 if (!ok) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1147 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1148 throw OrthancException(ErrorCode_FullStorage); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1149 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1150 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1151 LOG(INFO) << "Recycling one patient"; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1152 db_->DeleteResource(patientToRecycle); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1153 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1154 if (!IsRecyclingNeeded(instanceSize)) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1155 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1156 // OK, we're done |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1157 break; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1158 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1159 } |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1160 } |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1161 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1162 void ServerIndex::SetMaximumPatientCount(unsigned int count) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1163 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1164 boost::mutex::scoped_lock lock(mutex_); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1165 maximumPatients_ = count; |
270
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1166 |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1167 if (count == 0) |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1168 { |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1169 LOG(WARNING) << "No limit on the number of stored patients"; |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1170 } |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1171 else |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1172 { |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1173 LOG(WARNING) << "At most " << count << " patients will be stored"; |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1174 } |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1175 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1176 StandaloneRecycling(); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1177 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1178 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1179 void ServerIndex::SetMaximumStorageSize(uint64_t size) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1180 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1181 boost::mutex::scoped_lock lock(mutex_); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1182 maximumStorageSize_ = size; |
270
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1183 |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1184 if (size == 0) |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1185 { |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1186 LOG(WARNING) << "No limit on the size of the storage area"; |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1187 } |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1188 else |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1189 { |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1190 LOG(WARNING) << "At most " << (size / MEGA_BYTES) << "MB will be used for the storage area"; |
270
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1191 } |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1192 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1193 StandaloneRecycling(); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1194 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1195 |
272
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1196 void ServerIndex::StandaloneRecycling() |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1197 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1198 // WARNING: No mutex here, do not include this as a public method |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
1199 Transaction t(*this); |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1200 Recycle(0, ""); |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
1201 t.Commit(0); |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1202 } |
272
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1203 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1204 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1205 bool ServerIndex::IsProtectedPatient(const std::string& publicId) |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1206 { |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1207 boost::mutex::scoped_lock lock(mutex_); |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1208 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1209 // Lookup for the requested resource |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1210 int64_t id; |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1211 ResourceType type; |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1212 if (!db_->LookupResource(publicId, id, type) || |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1213 type != ResourceType_Patient) |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1214 { |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1215 throw OrthancException(ErrorCode_ParameterOutOfRange); |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1216 } |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1217 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1218 return db_->IsProtectedPatient(id); |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1219 } |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1220 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1221 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1222 void ServerIndex::SetProtectedPatient(const std::string& publicId, |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1223 bool isProtected) |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1224 { |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1225 boost::mutex::scoped_lock lock(mutex_); |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1226 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1227 // Lookup for the requested resource |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1228 int64_t id; |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1229 ResourceType type; |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1230 if (!db_->LookupResource(publicId, id, type) || |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1231 type != ResourceType_Patient) |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1232 { |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1233 throw OrthancException(ErrorCode_ParameterOutOfRange); |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1234 } |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1235 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1236 // No need for a SQLite::Transaction here, as we only make 1 write to the DB |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1237 db_->SetProtectedPatient(id, isProtected); |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1238 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1239 if (isProtected) |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1240 LOG(INFO) << "Patient " << publicId << " has been protected"; |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1241 else |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1242 LOG(INFO) << "Patient " << publicId << " has been unprotected"; |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1243 } |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1244 |
304 | 1245 |
714
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1246 void ServerIndex::GetChildren(std::list<std::string>& result, |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1247 const std::string& publicId) |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1248 { |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1249 result.clear(); |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1250 |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1251 boost::mutex::scoped_lock lock(mutex_); |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1252 |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1253 ResourceType type; |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1254 int64_t resource; |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1255 if (!db_->LookupResource(publicId, resource, type)) |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1256 { |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1257 throw OrthancException(ErrorCode_UnknownResource); |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1258 } |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1259 |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1260 if (type == ResourceType_Instance) |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1261 { |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1262 // An instance cannot have a child |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1263 throw OrthancException(ErrorCode_BadParameterType); |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1264 } |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1265 |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1266 std::list<int64_t> tmp; |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1267 db_->GetChildrenInternalId(tmp, resource); |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1268 |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1269 for (std::list<int64_t>::const_iterator |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1270 it = tmp.begin(); it != tmp.end(); ++it) |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1271 { |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1272 result.push_back(db_->GetPublicId(*it)); |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1273 } |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1274 } |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1275 |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1276 |
304 | 1277 void ServerIndex::GetChildInstances(std::list<std::string>& result, |
1278 const std::string& publicId) | |
1279 { | |
1280 result.clear(); | |
1281 | |
1282 boost::mutex::scoped_lock lock(mutex_); | |
1283 | |
1284 ResourceType type; | |
1285 int64_t top; | |
1286 if (!db_->LookupResource(publicId, top, type)) | |
1287 { | |
1288 throw OrthancException(ErrorCode_UnknownResource); | |
1289 } | |
1290 | |
1291 if (type == ResourceType_Instance) | |
1292 { | |
1293 // The resource is already an instance: Do not go down the hierarchy | |
1294 result.push_back(publicId); | |
1295 return; | |
1296 } | |
1297 | |
1298 std::stack<int64_t> toExplore; | |
1299 toExplore.push(top); | |
1300 | |
1301 std::list<int64_t> tmp; | |
1302 | |
1303 while (!toExplore.empty()) | |
1304 { | |
1305 // Get the internal ID of the current resource | |
1306 int64_t resource = toExplore.top(); | |
1307 toExplore.pop(); | |
1308 | |
1309 if (db_->GetResourceType(resource) == ResourceType_Instance) | |
1310 { | |
1311 result.push_back(db_->GetPublicId(resource)); | |
1312 } | |
1313 else | |
1314 { | |
1315 // Tag all the children of this resource as to be explored | |
1316 db_->GetChildrenInternalId(tmp, resource); | |
1317 for (std::list<int64_t>::const_iterator | |
656 | 1318 it = tmp.begin(); it != tmp.end(); ++it) |
304 | 1319 { |
1320 toExplore.push(*it); | |
1321 } | |
1322 } | |
1323 } | |
1324 } | |
1325 | |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1326 |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1327 void ServerIndex::SetMetadata(const std::string& publicId, |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1328 MetadataType type, |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1329 const std::string& value) |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1330 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1331 boost::mutex::scoped_lock lock(mutex_); |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1332 |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1333 ResourceType rtype; |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1334 int64_t id; |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1335 if (!db_->LookupResource(publicId, id, rtype)) |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1336 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1337 throw OrthancException(ErrorCode_UnknownResource); |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1338 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1339 |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1340 db_->SetMetadata(id, type, value); |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1341 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1342 |
438 | 1343 |
1344 void ServerIndex::DeleteMetadata(const std::string& publicId, | |
1345 MetadataType type) | |
1346 { | |
1347 boost::mutex::scoped_lock lock(mutex_); | |
1348 | |
1349 ResourceType rtype; | |
1350 int64_t id; | |
1351 if (!db_->LookupResource(publicId, id, rtype)) | |
1352 { | |
1353 throw OrthancException(ErrorCode_UnknownResource); | |
1354 } | |
1355 | |
1356 db_->DeleteMetadata(id, type); | |
1357 } | |
1358 | |
1359 | |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1360 bool ServerIndex::LookupMetadata(std::string& target, |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1361 const std::string& publicId, |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1362 MetadataType type) |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1363 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1364 boost::mutex::scoped_lock lock(mutex_); |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1365 |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1366 ResourceType rtype; |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1367 int64_t id; |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1368 if (!db_->LookupResource(publicId, id, rtype)) |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1369 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1370 throw OrthancException(ErrorCode_UnknownResource); |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1371 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1372 |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1373 return db_->LookupMetadata(target, id, type); |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1374 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1375 |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1376 |
739 | 1377 void ServerIndex::ListAvailableMetadata(std::list<MetadataType>& target, |
436
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1378 const std::string& publicId) |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1379 { |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1380 boost::mutex::scoped_lock lock(mutex_); |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1381 |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1382 ResourceType rtype; |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1383 int64_t id; |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1384 if (!db_->LookupResource(publicId, id, rtype)) |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1385 { |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1386 throw OrthancException(ErrorCode_UnknownResource); |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1387 } |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1388 |
739 | 1389 db_->ListAvailableMetadata(target, id); |
436
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1390 } |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1391 |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1392 |
697
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1393 void ServerIndex::ListAvailableAttachments(std::list<FileContentType>& target, |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1394 const std::string& publicId, |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1395 ResourceType expectedType) |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1396 { |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1397 boost::mutex::scoped_lock lock(mutex_); |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1398 |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1399 ResourceType type; |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1400 int64_t id; |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1401 if (!db_->LookupResource(publicId, id, type) || |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1402 expectedType != type) |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1403 { |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1404 throw OrthancException(ErrorCode_UnknownResource); |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1405 } |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1406 |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1407 db_->ListAvailableAttachments(target, id); |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1408 } |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1409 |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1410 |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1411 bool ServerIndex::LookupParent(std::string& target, |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1412 const std::string& publicId) |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1413 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1414 boost::mutex::scoped_lock lock(mutex_); |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1415 |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1416 ResourceType type; |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1417 int64_t id; |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1418 if (!db_->LookupResource(publicId, id, type)) |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1419 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1420 throw OrthancException(ErrorCode_UnknownResource); |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1421 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1422 |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1423 int64_t parentId; |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1424 if (db_->LookupParent(parentId, id)) |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1425 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1426 target = db_->GetPublicId(parentId); |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1427 return true; |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1428 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1429 else |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1430 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1431 return false; |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1432 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1433 } |
310 | 1434 |
1435 | |
1436 uint64_t ServerIndex::IncrementGlobalSequence(GlobalProperty sequence) | |
1437 { | |
1438 boost::mutex::scoped_lock lock(mutex_); | |
311 | 1439 |
1440 std::auto_ptr<SQLite::Transaction> transaction(db_->StartTransaction()); | |
1441 | |
1442 transaction->Begin(); | |
1443 uint64_t seq = db_->IncrementGlobalSequence(sequence); | |
1444 transaction->Commit(); | |
1445 | |
1446 return seq; | |
310 | 1447 } |
315 | 1448 |
1449 | |
1450 | |
1451 void ServerIndex::LogChange(ChangeType changeType, | |
1452 const std::string& publicId) | |
1453 { | |
1454 boost::mutex::scoped_lock lock(mutex_); | |
1455 std::auto_ptr<SQLite::Transaction> transaction(db_->StartTransaction()); | |
1456 transaction->Begin(); | |
1457 | |
1458 int64_t id; | |
1459 ResourceType type; | |
1460 if (!db_->LookupResource(publicId, id, type)) | |
1461 { | |
1462 throw OrthancException(ErrorCode_UnknownResource); | |
1463 } | |
1464 | |
1198 | 1465 db_->LogChange(id, changeType, type, publicId); |
315 | 1466 |
1467 transaction->Commit(); | |
1468 } | |
413
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1469 |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1470 |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1471 void ServerIndex::DeleteChanges() |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1472 { |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1473 boost::mutex::scoped_lock lock(mutex_); |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1474 db_->ClearTable("Changes"); |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1475 } |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1476 |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1477 void ServerIndex::DeleteExportedResources() |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1478 { |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1479 boost::mutex::scoped_lock lock(mutex_); |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1480 db_->ClearTable("ExportedResources"); |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1481 } |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1482 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1483 |
646 | 1484 void ServerIndex::GetStatisticsInternal(/* out */ uint64_t& compressedSize, |
1485 /* out */ uint64_t& uncompressedSize, | |
1486 /* out */ unsigned int& countStudies, | |
1487 /* out */ unsigned int& countSeries, | |
1488 /* out */ unsigned int& countInstances, | |
1489 /* in */ int64_t id, | |
1490 /* in */ ResourceType type) | |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1491 { |
646 | 1492 std::stack<int64_t> toExplore; |
1493 toExplore.push(id); | |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1494 |
646 | 1495 countInstances = 0; |
1496 countSeries = 0; | |
1497 countStudies = 0; | |
1498 compressedSize = 0; | |
1499 uncompressedSize = 0; | |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1500 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1501 while (!toExplore.empty()) |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1502 { |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1503 // Get the internal ID of the current resource |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1504 int64_t resource = toExplore.top(); |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1505 toExplore.pop(); |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1506 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1507 ResourceType thisType = db_->GetResourceType(resource); |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1508 |
702
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1509 std::list<FileContentType> f; |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1510 db_->ListAvailableAttachments(f, resource); |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1511 |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1512 for (std::list<FileContentType>::const_iterator |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1513 it = f.begin(); it != f.end(); ++it) |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1514 { |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1515 FileInfo attachment; |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1516 if (db_->LookupAttachment(attachment, resource, *it)) |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1517 { |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1518 compressedSize += attachment.GetCompressedSize(); |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1519 uncompressedSize += attachment.GetUncompressedSize(); |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1520 } |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1521 } |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1522 |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1523 if (thisType == ResourceType_Instance) |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1524 { |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1525 countInstances++; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1526 } |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1527 else |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1528 { |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1529 switch (thisType) |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1530 { |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1531 case ResourceType_Study: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1532 countStudies++; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1533 break; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1534 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1535 case ResourceType_Series: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1536 countSeries++; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1537 break; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1538 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1539 default: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1540 break; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1541 } |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1542 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1543 // Tag all the children of this resource as to be explored |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1544 std::list<int64_t> tmp; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1545 db_->GetChildrenInternalId(tmp, resource); |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1546 for (std::list<int64_t>::const_iterator |
656 | 1547 it = tmp.begin(); it != tmp.end(); ++it) |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1548 { |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1549 toExplore.push(*it); |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1550 } |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1551 } |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1552 } |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1553 |
646 | 1554 if (countStudies == 0) |
1555 { | |
1556 countStudies = 1; | |
1557 } | |
1558 | |
1559 if (countSeries == 0) | |
1560 { | |
1561 countSeries = 1; | |
1562 } | |
1563 } | |
1564 | |
1565 | |
1566 | |
1567 void ServerIndex::GetStatistics(Json::Value& target, | |
1568 const std::string& publicId) | |
1569 { | |
1570 boost::mutex::scoped_lock lock(mutex_); | |
1571 | |
1572 ResourceType type; | |
1573 int64_t top; | |
1574 if (!db_->LookupResource(publicId, top, type)) | |
1575 { | |
1576 throw OrthancException(ErrorCode_UnknownResource); | |
1577 } | |
1578 | |
1579 uint64_t uncompressedSize; | |
1580 uint64_t compressedSize; | |
1581 unsigned int countStudies; | |
1582 unsigned int countSeries; | |
1583 unsigned int countInstances; | |
1584 GetStatisticsInternal(compressedSize, uncompressedSize, countStudies, | |
1585 countSeries, countInstances, top, type); | |
1586 | |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1587 target = Json::objectValue; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1588 target["DiskSize"] = boost::lexical_cast<std::string>(compressedSize); |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1589 target["DiskSizeMB"] = boost::lexical_cast<unsigned int>(compressedSize / MEGA_BYTES); |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1590 target["UncompressedSize"] = boost::lexical_cast<std::string>(uncompressedSize); |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1591 target["UncompressedSizeMB"] = boost::lexical_cast<unsigned int>(uncompressedSize / MEGA_BYTES); |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1592 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1593 switch (type) |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1594 { |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1595 // Do NOT add "break" below this point! |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1596 case ResourceType_Patient: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1597 target["CountStudies"] = countStudies; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1598 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1599 case ResourceType_Study: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1600 target["CountSeries"] = countSeries; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1601 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1602 case ResourceType_Series: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1603 target["CountInstances"] = countInstances; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1604 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1605 case ResourceType_Instance: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1606 default: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1607 break; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1608 } |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1609 } |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1610 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1611 |
646 | 1612 void ServerIndex::GetStatistics(/* out */ uint64_t& compressedSize, |
1613 /* out */ uint64_t& uncompressedSize, | |
1614 /* out */ unsigned int& countStudies, | |
1615 /* out */ unsigned int& countSeries, | |
1616 /* out */ unsigned int& countInstances, | |
1617 const std::string& publicId) | |
1618 { | |
1619 boost::mutex::scoped_lock lock(mutex_); | |
1620 | |
1621 ResourceType type; | |
1622 int64_t top; | |
1623 if (!db_->LookupResource(publicId, top, type)) | |
1624 { | |
1625 throw OrthancException(ErrorCode_UnknownResource); | |
1626 } | |
1627 | |
1628 GetStatisticsInternal(compressedSize, uncompressedSize, countStudies, | |
1629 countSeries, countInstances, top, type); | |
1630 } | |
1631 | |
1632 | |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1633 void ServerIndex::UnstableResourcesMonitorThread(ServerIndex* that) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1634 { |
810
401a9633e492
configuration into a namespace
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
744
diff
changeset
|
1635 int stableAge = Configuration::GetGlobalIntegerParameter("StableAge", 60); |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1636 if (stableAge <= 0) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1637 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1638 stableAge = 60; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1639 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1640 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1641 LOG(INFO) << "Starting the monitor for stable resources (stable age = " << stableAge << ")"; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1642 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1643 while (!that->done_) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1644 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1645 // Check for stable resources each second |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1646 boost::this_thread::sleep(boost::posix_time::seconds(1)); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1647 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1648 boost::mutex::scoped_lock lock(that->mutex_); |
513 | 1649 |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1650 while (!that->unstableResources_.IsEmpty() && |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1651 that->unstableResources_.GetOldestPayload().GetAge() > static_cast<unsigned int>(stableAge)) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1652 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1653 // This DICOM resource has not received any new instance for |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1654 // some time. It can be considered as stable. |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1655 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1656 UnstableResourcePayload payload; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1657 int64_t id = that->unstableResources_.RemoveOldest(payload); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1658 |
513 | 1659 // Ensure that the resource is still existing before logging the change |
1660 if (that->db_->IsExistingResource(id)) | |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1661 { |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1662 switch (payload.GetResourceType()) |
513 | 1663 { |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1664 case ResourceType_Patient: |
1198 | 1665 that->db_->LogChange(id, ChangeType_StablePatient, ResourceType_Patient, payload.GetPublicId()); |
513 | 1666 break; |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1667 |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1668 case ResourceType_Study: |
1198 | 1669 that->db_->LogChange(id, ChangeType_StableStudy, ResourceType_Study, payload.GetPublicId()); |
513 | 1670 break; |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1671 |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1672 case ResourceType_Series: |
1198 | 1673 that->db_->LogChange(id, ChangeType_StableSeries, ResourceType_Series, payload.GetPublicId()); |
513 | 1674 break; |
1675 | |
1676 default: | |
1677 throw OrthancException(ErrorCode_InternalError); | |
1678 } | |
1679 | |
1680 //LOG(INFO) << "Stable resource: " << EnumerationToString(payload.type_) << " " << id; | |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1681 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1682 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1683 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1684 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1685 LOG(INFO) << "Closing the monitor thread for stable resources"; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1686 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1687 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1688 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1689 void ServerIndex::MarkAsUnstable(int64_t id, |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1690 Orthanc::ResourceType type, |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1691 const std::string& publicId) |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1692 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1693 // WARNING: Before calling this method, "mutex_" must be locked. |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1694 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1695 assert(type == Orthanc::ResourceType_Patient || |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1696 type == Orthanc::ResourceType_Study || |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1697 type == Orthanc::ResourceType_Series); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1698 |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1699 UnstableResourcePayload payload(type, publicId); |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1700 unstableResources_.AddOrMakeMostRecent(id, payload); |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1701 //LOG(INFO) << "Unstable resource: " << EnumerationToString(type) << " " << id; |
1189
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
1702 |
1198 | 1703 db_->LogChange(id, ChangeType_NewChildInstance, type, publicId); |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1704 } |
521 | 1705 |
1706 | |
1707 | |
1162 | 1708 void ServerIndex::LookupIdentifier(std::list<std::string>& result, |
1709 const DicomTag& tag, | |
1710 const std::string& value, | |
1711 ResourceType type) | |
615 | 1712 { |
1713 result.clear(); | |
1714 | |
1715 boost::mutex::scoped_lock lock(mutex_); | |
1716 | |
1717 std::list<int64_t> id; | |
1162 | 1718 db_->LookupIdentifier(id, tag, value); |
615 | 1719 |
1720 for (std::list<int64_t>::const_iterator | |
656 | 1721 it = id.begin(); it != id.end(); ++it) |
615 | 1722 { |
1723 if (db_->GetResourceType(*it) == type) | |
1724 { | |
1725 result.push_back(db_->GetPublicId(*it)); | |
1726 } | |
1727 } | |
1728 } | |
1729 | |
1730 | |
1162 | 1731 void ServerIndex::LookupIdentifier(std::list<std::string>& result, |
1732 const DicomTag& tag, | |
1733 const std::string& value) | |
521 | 1734 { |
1735 result.clear(); | |
1736 | |
1737 boost::mutex::scoped_lock lock(mutex_); | |
1738 | |
1739 std::list<int64_t> id; | |
1162 | 1740 db_->LookupIdentifier(id, tag, value); |
521 | 1741 |
1742 for (std::list<int64_t>::const_iterator | |
656 | 1743 it = id.begin(); it != id.end(); ++it) |
521 | 1744 { |
1745 result.push_back(db_->GetPublicId(*it)); | |
1746 } | |
1747 } | |
1748 | |
1749 | |
1162 | 1750 void ServerIndex::LookupIdentifier(std::list< std::pair<ResourceType, std::string> >& result, |
1751 const std::string& value) | |
521 | 1752 { |
1753 result.clear(); | |
1754 | |
1755 boost::mutex::scoped_lock lock(mutex_); | |
1756 | |
1757 std::list<int64_t> id; | |
1162 | 1758 db_->LookupIdentifier(id, value); |
521 | 1759 |
1760 for (std::list<int64_t>::const_iterator | |
656 | 1761 it = id.begin(); it != id.end(); ++it) |
521 | 1762 { |
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1128
diff
changeset
|
1763 result.push_back(std::make_pair(db_->GetResourceType(*it), |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1128
diff
changeset
|
1764 db_->GetPublicId(*it))); |
521 | 1765 } |
1766 } | |
699
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1767 |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1768 |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1769 StoreStatus ServerIndex::AddAttachment(const FileInfo& attachment, |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1770 const std::string& publicId) |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1771 { |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1772 boost::mutex::scoped_lock lock(mutex_); |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1773 |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1774 Transaction t(*this); |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1775 |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1776 ResourceType resourceType; |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1777 int64_t resourceId; |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1778 if (!db_->LookupResource(publicId, resourceId, resourceType)) |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1779 { |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1780 return StoreStatus_Failure; // Inexistent resource |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1781 } |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1782 |
704
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1783 // Remove possible previous attachment |
699
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1784 db_->DeleteAttachment(resourceId, attachment.GetContentType()); |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1785 |
704
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1786 // Locate the patient of the target resource |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1787 int64_t patientId = resourceId; |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1788 for (;;) |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1789 { |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1790 int64_t parent; |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1791 if (db_->LookupParent(parent, patientId)) |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1792 { |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1793 // We have not reached the patient level yet |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1794 patientId = parent; |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1795 } |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1796 else |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1797 { |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1798 // We have reached the patient level |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1799 break; |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1800 } |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1801 } |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1802 |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1803 // Possibly apply the recycling mechanism while preserving this patient |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1804 assert(db_->GetResourceType(patientId) == ResourceType_Patient); |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1805 Recycle(attachment.GetCompressedSize(), db_->GetPublicId(patientId)); |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1806 |
699
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1807 db_->AddAttachment(resourceId, attachment); |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1808 |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1809 t.Commit(attachment.GetCompressedSize()); |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1810 |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1811 return StoreStatus_Success; |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1812 } |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1813 |
702
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1814 |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1815 void ServerIndex::DeleteAttachment(const std::string& publicId, |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1816 FileContentType type) |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1817 { |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1818 boost::mutex::scoped_lock lock(mutex_); |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1819 |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1820 Transaction t(*this); |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1821 |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1822 ResourceType rtype; |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1823 int64_t id; |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1824 if (!db_->LookupResource(publicId, id, rtype)) |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1825 { |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1826 throw OrthancException(ErrorCode_UnknownResource); |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1827 } |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1828 |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1829 db_->DeleteAttachment(id, type); |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1830 |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1831 t.Commit(0); |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1832 } |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1833 |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1834 |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1835 bool ServerIndex::GetMetadata(Json::Value& target, |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1836 const std::string& publicId) |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1837 { |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1838 boost::mutex::scoped_lock lock(mutex_); |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1839 |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1840 target = Json::objectValue; |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1841 |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1842 ResourceType type; |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1843 int64_t id; |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1844 if (!db_->LookupResource(publicId, id, type)) |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1845 { |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1846 return false; |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1847 } |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1848 |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1849 std::list<MetadataType> metadata; |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1850 db_->ListAvailableMetadata(metadata, id); |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1851 |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1852 for (std::list<MetadataType>::const_iterator |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1853 it = metadata.begin(); it != metadata.end(); it++) |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1854 { |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1855 std::string key = EnumerationToString(*it); |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1856 std::string value = db_->GetMetadata(id, *it); |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1857 target[key] = value; |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1858 } |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1859 |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1860 return true; |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1861 } |
1218
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1862 |
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1863 |
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1864 std::string ServerIndex::GetGlobalProperty(GlobalProperty property, |
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1865 const std::string& defaultValue) |
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1866 { |
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1867 boost::mutex::scoped_lock lock(mutex_); |
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1868 return db_->GetGlobalProperty(property, defaultValue); |
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1869 } |
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1870 |
0 | 1871 } |