Mercurial > hg > orthanc
annotate OrthancFramework/UnitTestsSources/DicomMapTests.cpp @ 5163:ee48de2fa4c0
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author | Alain Mazy <am@osimis.io> |
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date | Fri, 03 Feb 2023 14:34:33 +0100 |
parents | a9ca92ecbbc2 |
children | 48005e522bd6 |
rev | line source |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2022 Osimis S.A., Belgium |
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6 * Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
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7 * |
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8 * This program is free software: you can redistribute it and/or |
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9 * modify it under the terms of the GNU Lesser General Public License |
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10 * as published by the Free Software Foundation, either version 3 of |
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11 * the License, or (at your option) any later version. |
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12 * |
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13 * This program is distributed in the hope that it will be useful, but |
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14 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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16 * Lesser General Public License for more details. |
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17 * |
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18 * You should have received a copy of the GNU Lesser General Public |
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19 * License along with this program. If not, see |
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20 * <http://www.gnu.org/licenses/>. |
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21 **/ |
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22 |
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23 |
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24 #if ORTHANC_UNIT_TESTS_LINK_FRAMEWORK == 1 |
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25 // Must be the first to be sure to use the Orthanc framework shared library |
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26 # include <OrthancFramework.h> |
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27 #endif |
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28 |
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29 #if !defined(DCMTK_VERSION_NUMBER) |
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30 # error DCMTK_VERSION_NUMBER is not defined |
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31 #endif |
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32 |
4062 | 33 #include <gtest/gtest.h> |
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35 #include "../Sources/Compatibility.h" |
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36 #include "../Sources/OrthancException.h" |
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37 #include "../Sources/DicomFormat/DicomMap.h" |
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38 #include "../Sources/DicomFormat/DicomStreamReader.h" |
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39 #include "../Sources/DicomParsing/FromDcmtkBridge.h" |
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40 #include "../Sources/DicomParsing/ToDcmtkBridge.h" |
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41 #include "../Sources/DicomParsing/ParsedDicomFile.h" |
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42 #include "../Sources/DicomParsing/DicomWebJsonVisitor.h" |
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4304 | 44 #include <boost/lexical_cast.hpp> |
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46 using namespace Orthanc; | |
47 | |
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48 |
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49 namespace Orthanc |
711 | 50 { |
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51 // The namespace is necessary because of FRIEND_TEST |
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52 // http://code.google.com/p/googletest/wiki/AdvancedGuide#Private_Class_Members |
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53 |
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54 class DicomMapMainTagsTests : public ::testing::Test |
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55 { |
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56 public: |
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57 DicomMapMainTagsTests() |
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58 { |
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59 } |
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60 |
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61 virtual void SetUp() ORTHANC_OVERRIDE |
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62 { |
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63 DicomMap::ResetDefaultMainDicomTags(); |
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64 } |
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66 virtual void TearDown() ORTHANC_OVERRIDE |
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67 { |
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68 DicomMap::ResetDefaultMainDicomTags(); |
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69 } |
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70 }; |
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71 |
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72 TEST_F(DicomMapMainTagsTests, MainTags) |
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73 { |
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74 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_PATIENT_ID)); |
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75 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_PATIENT_ID, ResourceType_Patient)); |
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76 ASSERT_FALSE(DicomMap::IsMainDicomTag(DICOM_TAG_PATIENT_ID, ResourceType_Study)); |
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78 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_STUDY_INSTANCE_UID)); |
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79 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_ACCESSION_NUMBER)); |
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80 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_SERIES_INSTANCE_UID)); |
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81 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_SOP_INSTANCE_UID)); |
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82 |
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83 { |
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84 const std::set<DicomTag>& s = DicomMap::GetAllMainDicomTags(); |
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85 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_PATIENT_ID)); |
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86 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_STUDY_INSTANCE_UID)); |
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87 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_ACCESSION_NUMBER)); |
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88 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_SERIES_INSTANCE_UID)); |
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89 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_SOP_INSTANCE_UID)); |
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90 } |
711 | 91 |
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92 { |
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93 const std::set<DicomTag>& s = DicomMap::GetMainDicomTags(ResourceType_Patient); |
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94 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_PATIENT_ID)); |
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95 ASSERT_TRUE(s.end() == s.find(DICOM_TAG_STUDY_INSTANCE_UID)); |
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96 } |
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98 { |
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99 const std::set<DicomTag>& s = DicomMap::GetMainDicomTags(ResourceType_Study); |
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100 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_STUDY_INSTANCE_UID)); |
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101 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_ACCESSION_NUMBER)); |
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102 ASSERT_TRUE(s.end() == s.find(DICOM_TAG_PATIENT_ID)); |
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103 } |
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104 |
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105 { |
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106 const std::set<DicomTag>& s = DicomMap::GetMainDicomTags(ResourceType_Series); |
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107 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_SERIES_INSTANCE_UID)); |
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108 ASSERT_TRUE(s.end() == s.find(DICOM_TAG_PATIENT_ID)); |
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109 } |
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111 { |
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112 const std::set<DicomTag>& s = DicomMap::GetMainDicomTags(ResourceType_Instance); |
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113 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_SOP_INSTANCE_UID)); |
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114 ASSERT_TRUE(s.end() == s.find(DICOM_TAG_PATIENT_ID)); |
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115 } |
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116 } |
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117 |
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118 TEST_F(DicomMapMainTagsTests, AddMainTags) |
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119 { |
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120 DicomMap::AddMainDicomTag(DICOM_TAG_BITS_ALLOCATED, ResourceType_Instance); |
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122 { |
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123 const std::set<DicomTag>& s = DicomMap::GetMainDicomTags(ResourceType_Instance); |
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124 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_BITS_ALLOCATED)); |
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125 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_SOP_INSTANCE_UID)); |
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126 } |
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127 { |
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128 const std::set<DicomTag>& s = DicomMap::GetMainDicomTags(ResourceType_Series); |
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129 ASSERT_TRUE(s.end() == s.find(DICOM_TAG_BITS_ALLOCATED)); |
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130 } |
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131 |
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132 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_BITS_ALLOCATED)); |
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133 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_BITS_ALLOCATED, ResourceType_Instance)); |
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134 |
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135 // adding the same tag should throw |
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136 ASSERT_THROW(DicomMap::AddMainDicomTag(DICOM_TAG_BITS_ALLOCATED, ResourceType_Instance), OrthancException); |
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137 |
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138 } |
4933 | 139 |
140 TEST_F(DicomMapMainTagsTests, Signatures) | |
141 { | |
142 std::string defaultPatientSignature = DicomMap::GetDefaultMainDicomTagsSignature(ResourceType_Patient); | |
143 std::string defaultStudySignature = DicomMap::GetDefaultMainDicomTagsSignature(ResourceType_Study); | |
144 std::string defaultSeriesSignature = DicomMap::GetDefaultMainDicomTagsSignature(ResourceType_Series); | |
145 std::string defaultInstanceSignature = DicomMap::GetDefaultMainDicomTagsSignature(ResourceType_Instance); | |
146 | |
147 ASSERT_NE(defaultInstanceSignature, defaultPatientSignature); | |
148 ASSERT_NE(defaultSeriesSignature, defaultStudySignature); | |
149 ASSERT_NE(defaultSeriesSignature, defaultPatientSignature); | |
150 | |
151 std::string patientSignature = DicomMap::GetMainDicomTagsSignature(ResourceType_Patient); | |
152 std::string studySignature = DicomMap::GetMainDicomTagsSignature(ResourceType_Study); | |
153 std::string seriesSignature = DicomMap::GetMainDicomTagsSignature(ResourceType_Series); | |
154 std::string instanceSignature = DicomMap::GetMainDicomTagsSignature(ResourceType_Instance); | |
155 | |
156 // at start, default and current signature should be equal | |
157 ASSERT_EQ(defaultPatientSignature, patientSignature); | |
158 ASSERT_EQ(defaultStudySignature, studySignature); | |
159 ASSERT_EQ(defaultSeriesSignature, seriesSignature); | |
160 ASSERT_EQ(defaultInstanceSignature, instanceSignature); | |
161 | |
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162 DicomMap::AddMainDicomTag(DICOM_TAG_BITS_ALLOCATED, ResourceType_Instance); |
4933 | 163 instanceSignature = DicomMap::GetMainDicomTagsSignature(ResourceType_Instance); |
164 | |
165 ASSERT_NE(defaultInstanceSignature, instanceSignature); | |
166 } | |
167 | |
711 | 168 } |
169 | |
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170 |
711 | 171 TEST(DicomMap, Tags) |
172 { | |
1360 | 173 std::set<DicomTag> s; |
174 | |
711 | 175 DicomMap m; |
1360 | 176 m.GetTags(s); |
1492 | 177 ASSERT_EQ(0u, s.size()); |
1360 | 178 |
711 | 179 ASSERT_FALSE(m.HasTag(DICOM_TAG_PATIENT_NAME)); |
180 ASSERT_FALSE(m.HasTag(0x0010, 0x0010)); | |
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181 m.SetValue(0x0010, 0x0010, "PatientName", false); |
711 | 182 ASSERT_TRUE(m.HasTag(DICOM_TAG_PATIENT_NAME)); |
183 ASSERT_TRUE(m.HasTag(0x0010, 0x0010)); | |
184 | |
1360 | 185 m.GetTags(s); |
1492 | 186 ASSERT_EQ(1u, s.size()); |
1360 | 187 ASSERT_EQ(DICOM_TAG_PATIENT_NAME, *s.begin()); |
188 | |
711 | 189 ASSERT_FALSE(m.HasTag(DICOM_TAG_PATIENT_ID)); |
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190 m.SetValue(DICOM_TAG_PATIENT_ID, "PatientID", false); |
711 | 191 ASSERT_TRUE(m.HasTag(0x0010, 0x0020)); |
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192 m.SetValue(DICOM_TAG_PATIENT_ID, "PatientID2", false); |
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193 ASSERT_EQ("PatientID2", m.GetValue(0x0010, 0x0020).GetContent()); |
711 | 194 |
1360 | 195 m.GetTags(s); |
1492 | 196 ASSERT_EQ(2u, s.size()); |
1360 | 197 |
711 | 198 m.Remove(DICOM_TAG_PATIENT_ID); |
199 ASSERT_THROW(m.GetValue(0x0010, 0x0020), OrthancException); | |
200 | |
1360 | 201 m.GetTags(s); |
1492 | 202 ASSERT_EQ(1u, s.size()); |
1360 | 203 ASSERT_EQ(DICOM_TAG_PATIENT_NAME, *s.begin()); |
204 | |
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205 std::unique_ptr<DicomMap> mm(m.Clone()); |
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206 ASSERT_EQ("PatientName", mm->GetValue(DICOM_TAG_PATIENT_NAME).GetContent()); |
711 | 207 |
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208 m.SetValue(DICOM_TAG_PATIENT_ID, "Hello", false); |
711 | 209 ASSERT_THROW(mm->GetValue(DICOM_TAG_PATIENT_ID), OrthancException); |
210 mm->CopyTagIfExists(m, DICOM_TAG_PATIENT_ID); | |
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211 ASSERT_EQ("Hello", mm->GetValue(DICOM_TAG_PATIENT_ID).GetContent()); |
711 | 212 |
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213 DicomValue v; |
711 | 214 ASSERT_TRUE(v.IsNull()); |
215 } | |
216 | |
217 | |
218 TEST(DicomMap, FindTemplates) | |
219 { | |
220 DicomMap m; | |
221 | |
222 DicomMap::SetupFindPatientTemplate(m); | |
223 ASSERT_TRUE(m.HasTag(DICOM_TAG_PATIENT_ID)); | |
224 | |
225 DicomMap::SetupFindStudyTemplate(m); | |
226 ASSERT_TRUE(m.HasTag(DICOM_TAG_STUDY_INSTANCE_UID)); | |
227 ASSERT_TRUE(m.HasTag(DICOM_TAG_ACCESSION_NUMBER)); | |
228 | |
229 DicomMap::SetupFindSeriesTemplate(m); | |
230 ASSERT_TRUE(m.HasTag(DICOM_TAG_SERIES_INSTANCE_UID)); | |
231 | |
232 DicomMap::SetupFindInstanceTemplate(m); | |
233 ASSERT_TRUE(m.HasTag(DICOM_TAG_SOP_INSTANCE_UID)); | |
234 } | |
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235 |
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236 |
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237 |
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238 |
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239 static void TestModule(ResourceType level, |
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240 DicomModule module) |
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241 { |
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242 // REFERENCE: DICOM PS3.3 2015c - Information Object Definitions |
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243 // http://dicom.nema.org/medical/dicom/current/output/html/part03.html |
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244 |
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245 std::set<DicomTag> moduleTags; |
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246 const std::set<DicomTag>& main = DicomMap::GetMainDicomTags(level); |
1368 | 247 DicomTag::AddTagsForModule(moduleTags, module); |
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248 |
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249 // The main dicom tags are a subset of the module |
1304 | 250 for (std::set<DicomTag>::const_iterator it = main.begin(); it != main.end(); ++it) |
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251 { |
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252 bool ok = moduleTags.find(*it) != moduleTags.end(); |
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253 |
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254 // Exceptions for the Study level |
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255 if (level == ResourceType_Study && |
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256 (*it == DicomTag(0x0008, 0x0080) || /* InstitutionName, from Visit identification module, related to Visit */ |
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257 *it == DicomTag(0x0032, 0x1032) || /* RequestingPhysician, from Imaging Service Request module, related to Study */ |
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258 *it == DicomTag(0x0032, 0x1060))) /* RequestedProcedureDescription, from Requested Procedure module, related to Study */ |
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259 { |
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260 ok = true; |
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261 } |
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262 |
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263 // Exceptions for the Series level |
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264 if (level == ResourceType_Series && |
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265 (*it == DicomTag(0x0008, 0x0070) || /* Manufacturer, from General Equipment Module */ |
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266 *it == DicomTag(0x0008, 0x1010) || /* StationName, from General Equipment Module */ |
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267 *it == DicomTag(0x0018, 0x0024) || /* SequenceName, from MR Image Module (SIMPLIFICATION => Series) */ |
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268 *it == DicomTag(0x0018, 0x1090) || /* CardiacNumberOfImages, from MR Image Module (SIMPLIFICATION => Series) */ |
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269 *it == DicomTag(0x0020, 0x0037) || /* ImageOrientationPatient, from Image Plane Module (SIMPLIFICATION => Series) */ |
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270 *it == DicomTag(0x0020, 0x0105) || /* NumberOfTemporalPositions, from MR Image Module (SIMPLIFICATION => Series) */ |
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271 *it == DicomTag(0x0020, 0x1002) || /* ImagesInAcquisition, from General Image Module (SIMPLIFICATION => Series) */ |
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272 *it == DicomTag(0x0054, 0x0081) || /* NumberOfSlices, from PET Series module */ |
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273 *it == DicomTag(0x0054, 0x0101) || /* NumberOfTimeSlices, from PET Series module */ |
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274 *it == DicomTag(0x0054, 0x1000) || /* SeriesType, from PET Series module */ |
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275 *it == DicomTag(0x0018, 0x1400) || /* AcquisitionDeviceProcessingDescription, from CR/X-Ray/DX/WholeSlideMicro Image (SIMPLIFICATION => Series) */ |
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276 *it == DicomTag(0x0018, 0x0010))) /* ContrastBolusAgent, from Contrast/Bolus module (SIMPLIFICATION => Series) */ |
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277 { |
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278 ok = true; |
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279 } |
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280 |
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281 // Exceptions for the Instance level |
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283 (*it == DicomTag(0x0020, 0x0012) || /* AccessionNumber, from General Image module */ |
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284 *it == DicomTag(0x0054, 0x1330) || /* ImageIndex, from PET Image module */ |
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285 *it == DicomTag(0x0020, 0x0100) || /* TemporalPositionIdentifier, from MR Image module */ |
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286 *it == DicomTag(0x0028, 0x0008) || /* NumberOfFrames, from Multi-frame module attributes, related to Image */ |
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287 *it == DicomTag(0x0020, 0x0032) || /* ImagePositionPatient, from Image Plan module, related to Image */ |
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288 *it == DicomTag(0x0020, 0x0037) || /* ImageOrientationPatient, from Image Plane Module (Orthanc 1.4.2) */ |
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289 *it == DicomTag(0x0020, 0x4000))) /* ImageComments, from General Image module */ |
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290 { |
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291 ok = true; |
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292 } |
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293 |
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294 if (!ok) |
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295 { |
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296 std::cout << it->Format() << ": " << FromDcmtkBridge::GetTagName(*it, "") |
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297 << " not expected at level " << EnumerationToString(level) << std::endl; |
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298 } |
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299 |
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300 EXPECT_TRUE(ok); |
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301 } |
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302 } |
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303 |
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304 |
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305 TEST(DicomMap, Modules) |
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306 { |
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307 TestModule(ResourceType_Patient, DicomModule_Patient); |
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308 TestModule(ResourceType_Study, DicomModule_Study); |
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309 TestModule(ResourceType_Series, DicomModule_Series); // TODO |
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310 TestModule(ResourceType_Instance, DicomModule_Instance); |
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311 } |
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312 |
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313 |
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314 TEST(DicomMap, Parse) |
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315 { |
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316 DicomMap m; |
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317 float f; |
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318 double d; |
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319 int32_t i; |
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320 int64_t j; |
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321 uint32_t k; |
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322 uint64_t l; |
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323 unsigned int ui; |
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324 std::string s; |
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325 |
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326 m.SetValue(DICOM_TAG_PATIENT_NAME, " ", false); // Empty value |
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327 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseFloat(f)); |
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328 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseDouble(d)); |
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329 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger32(i)); |
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330 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger64(j)); |
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331 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger32(k)); |
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332 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger64(l)); |
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333 |
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334 m.SetValue(DICOM_TAG_PATIENT_NAME, "0", true); // Binary value |
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335 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseFloat(f)); |
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336 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseDouble(d)); |
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337 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger32(i)); |
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338 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger64(j)); |
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339 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger32(k)); |
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340 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger64(l)); |
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341 |
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342 ASSERT_FALSE(m.LookupStringValue(s, DICOM_TAG_PATIENT_NAME, false)); |
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343 ASSERT_TRUE(m.LookupStringValue(s, DICOM_TAG_PATIENT_NAME, true)); |
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344 ASSERT_EQ("0", s); |
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345 |
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346 |
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347 // 2**31-1 |
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348 m.SetValue(DICOM_TAG_PATIENT_NAME, "2147483647", false); |
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349 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseFloat(f)); |
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350 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseDouble(d)); |
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351 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger32(i)); |
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352 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger64(j)); |
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353 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger32(k)); |
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354 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger64(l)); |
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355 ASSERT_FLOAT_EQ(2147483647.0f, f); |
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356 ASSERT_DOUBLE_EQ(2147483647.0, d); |
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357 ASSERT_EQ(2147483647, i); |
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358 ASSERT_EQ(2147483647ll, j); |
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359 ASSERT_EQ(2147483647u, k); |
2418 | 360 ASSERT_EQ(2147483647ull, l); |
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361 |
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362 // Test shortcuts |
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363 m.SetValue(DICOM_TAG_PATIENT_NAME, "42", false); |
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364 ASSERT_TRUE(m.ParseFloat(f, DICOM_TAG_PATIENT_NAME)); |
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365 ASSERT_TRUE(m.ParseDouble(d, DICOM_TAG_PATIENT_NAME)); |
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366 ASSERT_TRUE(m.ParseInteger32(i, DICOM_TAG_PATIENT_NAME)); |
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367 ASSERT_TRUE(m.ParseInteger64(j, DICOM_TAG_PATIENT_NAME)); |
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368 ASSERT_TRUE(m.ParseUnsignedInteger32(k, DICOM_TAG_PATIENT_NAME)); |
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369 ASSERT_TRUE(m.ParseUnsignedInteger64(l, DICOM_TAG_PATIENT_NAME)); |
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370 ASSERT_FLOAT_EQ(42.0f, f); |
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371 ASSERT_DOUBLE_EQ(42.0, d); |
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372 ASSERT_EQ(42, i); |
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373 ASSERT_EQ(42ll, j); |
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374 ASSERT_EQ(42u, k); |
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376 |
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377 ASSERT_TRUE(m.LookupStringValue(s, DICOM_TAG_PATIENT_NAME, false)); |
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378 ASSERT_EQ("42", s); |
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379 ASSERT_TRUE(m.LookupStringValue(s, DICOM_TAG_PATIENT_NAME, true)); |
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380 ASSERT_EQ("42", s); |
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381 |
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382 |
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383 // 2**31 |
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384 m.SetValue(DICOM_TAG_PATIENT_NAME, "2147483648", false); |
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385 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseFloat(f)); |
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386 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseDouble(d)); |
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387 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger32(i)); |
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388 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger64(j)); |
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389 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger32(k)); |
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390 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger64(l)); |
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391 ASSERT_FLOAT_EQ(2147483648.0f, f); |
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392 ASSERT_DOUBLE_EQ(2147483648.0, d); |
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393 ASSERT_EQ(2147483648ll, j); |
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394 ASSERT_EQ(2147483648u, k); |
2418 | 395 ASSERT_EQ(2147483648ull, l); |
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396 |
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397 // 2**32-1 |
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398 m.SetValue(DICOM_TAG_PATIENT_NAME, "4294967295", false); |
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399 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseFloat(f)); |
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400 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseDouble(d)); |
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401 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger32(i)); |
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402 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger64(j)); |
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403 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger32(k)); |
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404 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger64(l)); |
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405 ASSERT_FLOAT_EQ(4294967295.0f, f); |
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406 ASSERT_DOUBLE_EQ(4294967295.0, d); |
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407 ASSERT_EQ(4294967295ll, j); |
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408 ASSERT_EQ(4294967295u, k); |
2418 | 409 ASSERT_EQ(4294967295ull, l); |
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410 |
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411 // 2**32 |
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412 m.SetValue(DICOM_TAG_PATIENT_NAME, "4294967296", false); |
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413 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseFloat(f)); |
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414 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseDouble(d)); |
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415 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger32(i)); |
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416 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger64(j)); |
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417 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger32(k)); |
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418 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger64(l)); |
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419 ASSERT_FLOAT_EQ(4294967296.0f, f); |
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420 ASSERT_DOUBLE_EQ(4294967296.0, d); |
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421 ASSERT_EQ(4294967296ll, j); |
2418 | 422 ASSERT_EQ(4294967296ull, l); |
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423 |
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424 m.SetValue(DICOM_TAG_PATIENT_NAME, "-1", false); |
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425 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseFloat(f)); |
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426 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseDouble(d)); |
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427 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger32(i)); |
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428 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger64(j)); |
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429 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger32(k)); |
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430 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger64(l)); |
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431 ASSERT_FLOAT_EQ(-1.0f, f); |
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432 ASSERT_DOUBLE_EQ(-1.0, d); |
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433 ASSERT_EQ(-1, i); |
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434 ASSERT_EQ(-1ll, j); |
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435 |
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436 // -2**31 |
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437 m.SetValue(DICOM_TAG_PATIENT_NAME, "-2147483648", false); |
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438 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseFloat(f)); |
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439 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseDouble(d)); |
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440 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger32(i)); |
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441 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger64(j)); |
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442 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger32(k)); |
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443 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger64(l)); |
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444 ASSERT_FLOAT_EQ(-2147483648.0f, f); |
2829 | 445 ASSERT_DOUBLE_EQ(-2147483648.0, d); |
446 ASSERT_EQ(static_cast<int32_t>(-2147483648ll), i); | |
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447 ASSERT_EQ(-2147483648ll, j); |
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448 |
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449 // -2**31 - 1 |
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450 m.SetValue(DICOM_TAG_PATIENT_NAME, "-2147483649", false); |
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451 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseFloat(f)); |
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452 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseDouble(d)); |
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453 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger32(i)); |
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454 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger64(j)); |
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455 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger32(k)); |
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456 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger64(l)); |
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457 ASSERT_FLOAT_EQ(-2147483649.0f, f); |
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458 ASSERT_DOUBLE_EQ(-2147483649.0, d); |
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459 ASSERT_EQ(-2147483649ll, j); |
3519
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460 |
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461 |
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462 // "800\0" in US COLMUNS tag |
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463 m.SetValue(DICOM_TAG_COLUMNS, "800\0", false); |
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464 ASSERT_TRUE(m.GetValue(DICOM_TAG_COLUMNS).ParseFirstUnsignedInteger(ui)); |
3541 | 465 ASSERT_EQ(800u, ui); |
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466 m.SetValue(DICOM_TAG_COLUMNS, "800", false); |
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467 ASSERT_TRUE(m.GetValue(DICOM_TAG_COLUMNS).ParseFirstUnsignedInteger(ui)); |
3541 | 468 ASSERT_EQ(800u, ui); |
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469 } |
2863
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470 |
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471 |
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472 TEST(DicomMap, Serialize) |
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473 { |
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474 Json::Value s; |
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475 |
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476 { |
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477 DicomMap m; |
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478 m.SetValue(DICOM_TAG_PATIENT_NAME, "Hello", false); |
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479 m.SetValue(DICOM_TAG_STUDY_DESCRIPTION, "Binary", true); |
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480 m.SetNullValue(DICOM_TAG_SERIES_DESCRIPTION); |
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481 m.Serialize(s); |
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482 } |
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483 |
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484 { |
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485 DicomMap m; |
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486 m.Unserialize(s); |
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487 |
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488 const DicomValue* v = m.TestAndGetValue(DICOM_TAG_ACCESSION_NUMBER); |
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489 ASSERT_TRUE(v == NULL); |
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490 |
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491 v = m.TestAndGetValue(DICOM_TAG_PATIENT_NAME); |
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492 ASSERT_TRUE(v != NULL); |
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493 ASSERT_FALSE(v->IsNull()); |
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494 ASSERT_FALSE(v->IsBinary()); |
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495 ASSERT_EQ("Hello", v->GetContent()); |
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496 |
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497 v = m.TestAndGetValue(DICOM_TAG_STUDY_DESCRIPTION); |
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498 ASSERT_TRUE(v != NULL); |
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499 ASSERT_FALSE(v->IsNull()); |
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500 ASSERT_TRUE(v->IsBinary()); |
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501 ASSERT_EQ("Binary", v->GetContent()); |
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|
502 |
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503 v = m.TestAndGetValue(DICOM_TAG_SERIES_DESCRIPTION); |
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504 ASSERT_TRUE(v != NULL); |
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505 ASSERT_TRUE(v->IsNull()); |
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506 ASSERT_FALSE(v->IsBinary()); |
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507 ASSERT_THROW(v->GetContent(), OrthancException); |
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508 } |
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509 } |
3005
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DicomMap::FromDicomAsJson
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510 |
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DicomMap::FromDicomAsJson
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changeset
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511 |
8265a6b56100
DicomMap::FromDicomAsJson
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512 |
3006
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DicomMap::ExtractMainDicomTags()
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513 TEST(DicomMap, ExtractMainDicomTags) |
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514 { |
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515 DicomMap b; |
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DicomMap::ExtractMainDicomTags()
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516 b.SetValue(DICOM_TAG_PATIENT_NAME, "E", false); |
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517 ASSERT_TRUE(b.HasOnlyMainDicomTags()); |
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518 |
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519 { |
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diff
changeset
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520 DicomMap a; |
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521 a.SetValue(DICOM_TAG_PATIENT_NAME, "A", false); |
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DicomMap::ExtractMainDicomTags()
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522 a.SetValue(DICOM_TAG_STUDY_DESCRIPTION, "B", false); |
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523 a.SetValue(DICOM_TAG_SERIES_DESCRIPTION, "C", false); |
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524 a.SetValue(DICOM_TAG_NUMBER_OF_FRAMES, "D", false); |
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525 a.SetValue(DICOM_TAG_SLICE_THICKNESS, "F", false); |
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526 ASSERT_FALSE(a.HasOnlyMainDicomTags()); |
3006
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527 b.ExtractMainDicomTags(a); |
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528 } |
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529 |
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DicomMap::ExtractMainDicomTags()
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530 ASSERT_EQ(4u, b.GetSize()); |
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DicomMap::ExtractMainDicomTags()
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changeset
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531 ASSERT_EQ("A", b.GetValue(DICOM_TAG_PATIENT_NAME).GetContent()); |
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532 ASSERT_EQ("B", b.GetValue(DICOM_TAG_STUDY_DESCRIPTION).GetContent()); |
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533 ASSERT_EQ("C", b.GetValue(DICOM_TAG_SERIES_DESCRIPTION).GetContent()); |
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534 ASSERT_EQ("D", b.GetValue(DICOM_TAG_NUMBER_OF_FRAMES).GetContent()); |
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535 ASSERT_FALSE(b.HasTag(DICOM_TAG_SLICE_THICKNESS)); |
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536 ASSERT_TRUE(b.HasOnlyMainDicomTags()); |
3006
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DicomMap::ExtractMainDicomTags()
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changeset
|
537 |
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DicomMap::ExtractMainDicomTags()
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538 b.SetValue(DICOM_TAG_PATIENT_NAME, "G", false); |
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DicomMap::ExtractMainDicomTags()
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changeset
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539 |
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DicomMap::ExtractMainDicomTags()
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changeset
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540 { |
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DicomMap::ExtractMainDicomTags()
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changeset
|
541 DicomMap a; |
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DicomMap::ExtractMainDicomTags()
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542 a.SetValue(DICOM_TAG_PATIENT_NAME, "A", false); |
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543 a.SetValue(DICOM_TAG_SLICE_THICKNESS, "F", false); |
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544 ASSERT_FALSE(a.HasOnlyMainDicomTags()); |
3006
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changeset
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545 b.Merge(a); |
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546 } |
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DicomMap::ExtractMainDicomTags()
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547 |
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DicomMap::ExtractMainDicomTags()
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diff
changeset
|
548 ASSERT_EQ(5u, b.GetSize()); |
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changeset
|
549 ASSERT_EQ("G", b.GetValue(DICOM_TAG_PATIENT_NAME).GetContent()); |
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550 ASSERT_EQ("B", b.GetValue(DICOM_TAG_STUDY_DESCRIPTION).GetContent()); |
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551 ASSERT_EQ("C", b.GetValue(DICOM_TAG_SERIES_DESCRIPTION).GetContent()); |
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552 ASSERT_EQ("D", b.GetValue(DICOM_TAG_NUMBER_OF_FRAMES).GetContent()); |
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553 ASSERT_EQ("F", b.GetValue(DICOM_TAG_SLICE_THICKNESS).GetContent()); |
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554 ASSERT_FALSE(b.HasOnlyMainDicomTags()); |
3006
0e1755e5efd0
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555 } |
3187
4bbadcd03966
refactoring retrieval of metadata from database
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3060
diff
changeset
|
556 |
4bbadcd03966
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diff
changeset
|
557 |
4940
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changeset
|
558 TEST(DicomMap, ComputedTags) |
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559 { |
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560 { |
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561 std::set<DicomTag> tags; |
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|
562 |
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Alain Mazy <am@osimis.io>
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|
563 ASSERT_FALSE(DicomMap::HasOnlyComputedTags(tags)); |
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Alain Mazy <am@osimis.io>
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changeset
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564 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Instance)); |
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Alain Mazy <am@osimis.io>
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565 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Series)); |
304514ce84ee
tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
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diff
changeset
|
566 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Study)); |
304514ce84ee
tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
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changeset
|
567 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Patient)); |
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|
568 } |
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|
569 |
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diff
changeset
|
570 { |
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diff
changeset
|
571 std::set<DicomTag> tags; |
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|
572 tags.insert(DICOM_TAG_ACCESSION_NUMBER); |
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4933
diff
changeset
|
573 |
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Alain Mazy <am@osimis.io>
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diff
changeset
|
574 ASSERT_FALSE(DicomMap::HasOnlyComputedTags(tags)); |
304514ce84ee
tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
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changeset
|
575 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Instance)); |
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|
576 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Series)); |
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changeset
|
577 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Study)); |
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tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
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changeset
|
578 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Patient)); |
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|
579 } |
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diff
changeset
|
580 |
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diff
changeset
|
581 { |
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Alain Mazy <am@osimis.io>
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changeset
|
582 std::set<DicomTag> tags; |
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changeset
|
583 tags.insert(DICOM_TAG_MODALITIES_IN_STUDY); |
4944
f377d5643538
new Warnings configuration + InstanceAvailability tag
Alain Mazy <am@osimis.io>
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diff
changeset
|
584 tags.insert(DICOM_TAG_RETRIEVE_URL); |
4940
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changeset
|
585 |
304514ce84ee
tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
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diff
changeset
|
586 ASSERT_TRUE(DicomMap::HasOnlyComputedTags(tags)); |
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changeset
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587 ASSERT_TRUE(DicomMap::HasComputedTags(tags, ResourceType_Study)); |
304514ce84ee
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Alain Mazy <am@osimis.io>
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changeset
|
588 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Patient)); |
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tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
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diff
changeset
|
589 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Series)); |
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590 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Instance)); |
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591 } |
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592 |
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593 { |
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594 std::set<DicomTag> tags; |
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595 tags.insert(DICOM_TAG_ACCESSION_NUMBER); |
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596 tags.insert(DICOM_TAG_MODALITIES_IN_STUDY); |
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597 |
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598 ASSERT_FALSE(DicomMap::HasOnlyComputedTags(tags)); |
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599 ASSERT_TRUE(DicomMap::HasComputedTags(tags, ResourceType_Study)); |
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600 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Patient)); |
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601 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Series)); |
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602 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Instance)); |
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603 } |
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604 |
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605 } |
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606 |
3551
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607 TEST(DicomMap, RemoveBinary) |
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608 { |
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609 DicomMap b; |
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610 b.SetValue(DICOM_TAG_PATIENT_NAME, "A", false); |
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611 b.SetValue(DICOM_TAG_PATIENT_ID, "B", true); |
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612 b.SetValue(DICOM_TAG_STUDY_INSTANCE_UID, DicomValue()); // NULL |
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613 b.SetValue(DICOM_TAG_SERIES_INSTANCE_UID, DicomValue("C", false)); |
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614 b.SetValue(DICOM_TAG_SOP_INSTANCE_UID, DicomValue("D", true)); |
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615 |
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616 b.RemoveBinaryTags(); |
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617 |
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618 std::string s; |
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619 ASSERT_EQ(2u, b.GetSize()); |
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620 ASSERT_TRUE(b.LookupStringValue(s, DICOM_TAG_PATIENT_NAME, false)); ASSERT_EQ("A", s); |
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621 ASSERT_TRUE(b.LookupStringValue(s, DICOM_TAG_SERIES_INSTANCE_UID, false)); ASSERT_EQ("C", s); |
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622 } |
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623 |
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624 |
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625 TEST(DicomMap, FromDicomAsJsonAndSequences) |
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626 { |
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627 DicomMap m; |
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628 std::string jsonFullString = "{" |
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629 "\"0008,1090\" : " |
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630 "{" |
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631 "\"Name\" : \"ManufacturerModelName\"," |
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632 "\"Type\" : \"String\"," |
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633 "\"Value\" : \"MyModel\"" |
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634 "}," |
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635 "\"0008,1111\" : " |
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636 "{" |
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637 "\"Name\" : \"ReferencedPerformedProcedureStepSequence\"," |
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638 "\"Type\" : \"Sequence\"," |
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639 "\"Value\" : " |
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640 "[" |
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641 "{" |
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642 "\"0008,1150\" : " |
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643 "{" |
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644 "\"Name\" : \"ReferencedSOPClassUID\"," |
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645 "\"Type\" : \"String\"," |
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646 "\"Value\" : \"1.2.4\"" |
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647 "}," |
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648 "\"0008,1155\" : " |
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649 "{" |
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650 "\"Name\" : \"ReferencedSOPInstanceUID\"," |
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651 "\"Type\" : \"String\"," |
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652 "\"Value\" : \"1.2.3\"" |
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653 "}" |
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654 "}" |
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655 "]" |
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656 "}}"; |
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657 |
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658 Json::Value parsedJson; |
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659 bool ret = Toolbox::ReadJson(parsedJson, jsonFullString); |
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660 |
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661 m.FromDicomAsJson(parsedJson, false /* append */, true /* parseSequences*/); |
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662 ASSERT_TRUE(ret); |
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663 |
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664 ASSERT_TRUE(m.HasTag(DicomTag(0x0008, 0x1090))); |
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665 ASSERT_EQ("MyModel", m.GetValue(0x0008,0x1090).GetContent()); |
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666 |
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667 ASSERT_TRUE(m.HasTag(DicomTag(0x0008, 0x1111))); |
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668 const Json::Value& jsonSequence = m.GetValue(0x0008, 0x1111).GetSequenceContent(); |
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669 ASSERT_EQ("ReferencedSOPClassUID", jsonSequence[0]["0008,1150"]["Name"].asString()); |
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670 |
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671 {// serialize to human dicomAsJson |
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672 Json::Value dicomAsJson = Json::objectValue; |
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673 FromDcmtkBridge::ToJson(dicomAsJson, m, DicomToJsonFormat_Human); |
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674 // printf("%s", dicomAsJson.toStyledString().c_str()); |
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675 |
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676 ASSERT_TRUE(dicomAsJson.isMember("ManufacturerModelName")); |
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677 ASSERT_TRUE(dicomAsJson.isMember("ReferencedPerformedProcedureStepSequence")); |
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678 ASSERT_TRUE(dicomAsJson["ReferencedPerformedProcedureStepSequence"][0].isMember("ReferencedSOPClassUID")); |
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679 ASSERT_EQ("1.2.4", dicomAsJson["ReferencedPerformedProcedureStepSequence"][0]["ReferencedSOPClassUID"].asString()); |
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680 } |
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681 |
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682 {// serialize to full dicomAsJson |
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683 Json::Value dicomAsJson = Json::objectValue; |
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684 FromDcmtkBridge::ToJson(dicomAsJson, m, DicomToJsonFormat_Full); |
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685 // printf("%s", dicomAsJson.toStyledString().c_str()); |
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686 |
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687 ASSERT_TRUE(dicomAsJson.isMember("0008,1090")); |
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688 ASSERT_TRUE(dicomAsJson.isMember("0008,1111")); |
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689 ASSERT_TRUE(dicomAsJson["0008,1111"]["Value"][0].isMember("0008,1150")); |
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690 ASSERT_EQ("1.2.4", dicomAsJson["0008,1111"]["Value"][0]["0008,1150"]["Value"].asString()); |
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691 ASSERT_EQ("MyModel", dicomAsJson["0008,1090"]["Value"].asString()); |
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692 } |
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693 |
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694 {// serialize to short dicomAsJson |
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695 Json::Value dicomAsJson = Json::objectValue; |
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696 FromDcmtkBridge::ToJson(dicomAsJson, m, DicomToJsonFormat_Short); |
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697 // printf("%s", dicomAsJson.toStyledString().c_str()); |
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698 |
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699 ASSERT_TRUE(dicomAsJson.isMember("0008,1090")); |
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700 ASSERT_TRUE(dicomAsJson.isMember("0008,1111")); |
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701 ASSERT_TRUE(dicomAsJson["0008,1111"][0].isMember("0008,1150")); |
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702 ASSERT_EQ("1.2.4", dicomAsJson["0008,1111"][0]["0008,1150"].asString()); |
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703 ASSERT_EQ("MyModel", dicomAsJson["0008,1090"].asString()); |
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704 } |
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705 |
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706 {// extract sequence |
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707 DicomMap sequencesOnly; |
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708 m.ExtractSequences(sequencesOnly); |
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709 |
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710 ASSERT_EQ(1, sequencesOnly.GetSize()); |
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711 ASSERT_TRUE(sequencesOnly.HasTag(0x0008, 0x1111)); |
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712 ASSERT_TRUE(sequencesOnly.GetValue(0x0008, 0x1111).GetSequenceContent()[0].isMember("0008,1150")); |
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713 |
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714 // copy sequence |
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715 DicomMap sequencesCopy; |
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716 sequencesCopy.SetValue(0x0008, 0x1111, sequencesOnly.GetValue(0x0008, 0x1111)); |
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717 |
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718 ASSERT_EQ(1, sequencesCopy.GetSize()); |
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719 ASSERT_TRUE(sequencesCopy.HasTag(0x0008, 0x1111)); |
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720 ASSERT_TRUE(sequencesCopy.GetValue(0x0008, 0x1111).GetSequenceContent()[0].isMember("0008,1150")); |
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721 } |
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722 } |
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723 |
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724 TEST(DicomMap, ExtractSummary) |
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725 { |
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726 Json::Value v = Json::objectValue; |
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727 v["PatientName"] = "Hello"; |
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728 v["ReferencedSOPClassUID"] = "1.2.840.10008.5.1.4.1.1.4"; |
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729 |
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730 { |
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731 Json::Value a = Json::arrayValue; |
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732 |
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733 { |
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734 Json::Value item = Json::objectValue; |
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735 item["ReferencedSOPClassUID"] = "1.2.840.10008.5.1.4.1.1.4"; |
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736 item["ReferencedSOPInstanceUID"] = "1.2.840.113619.2.176.2025.1499492.7040.1171286241.719"; |
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737 a.append(item); |
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738 } |
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739 |
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740 { |
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741 Json::Value item = Json::objectValue; |
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742 item["ReferencedSOPClassUID"] = "1.2.840.10008.5.1.4.1.1.4"; // ReferencedSOPClassUID |
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743 item["ReferencedSOPInstanceUID"] = "1.2.840.113619.2.176.2025.1499492.7040.1171286241.726"; |
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744 a.append(item); |
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745 } |
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746 |
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747 v["ReferencedImageSequence"] = a; |
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748 } |
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749 |
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750 { |
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751 Json::Value a = Json::arrayValue; |
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752 |
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753 { |
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754 Json::Value item = Json::objectValue; |
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755 item["StudyInstanceUID"] = "1.2.840.113704.1.111.7016.1342451220.40"; |
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756 |
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757 { |
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758 Json::Value b = Json::arrayValue; |
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759 |
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760 { |
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761 Json::Value c = Json::objectValue; |
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762 c["CodeValue"] = "122403"; |
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763 c["0008,103e"] = "WORLD"; // Series description |
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|
764 b.append(c); |
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|
765 } |
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|
766 |
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|
767 item["PurposeOfReferenceCodeSequence"] = b; |
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|
768 } |
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|
769 |
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|
770 a.append(item); |
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|
771 } |
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|
772 |
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773 v["RelatedSeriesSequence"] = a; |
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|
774 } |
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|
775 |
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776 std::unique_ptr<ParsedDicomFile> dicom(ParsedDicomFile::CreateFromJson(v, DicomFromJsonFlags_None, "")); |
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777 |
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778 DicomMap summary; |
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779 std::set<DicomTag> ignoreTagLength; |
5045 | 780 dicom->ExtractDicomSummary(summary, 256, ignoreTagLength); |
5044
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781 |
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782 ASSERT_TRUE(summary.HasTag(0x0008, 0x1140)); |
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783 ASSERT_EQ("1.2.840.10008.5.1.4.1.1.4", summary.GetValue(0x0008, 0x1140).GetSequenceContent()[0]["0008,1150"]["Value"].asString()); |
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784 } |
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785 |
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|
786 |
3187
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|
787 |
3198
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788 TEST(DicomWebJson, Multiplicity) |
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789 { |
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790 // http://dicom.nema.org/medical/dicom/current/output/chtml/part18/sect_F.2.4.html |
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791 |
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792 ParsedDicomFile dicom(false); |
3201
b69fe409cb4d
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793 dicom.ReplacePlainString(DICOM_TAG_PATIENT_NAME, "SB1^SB2^SB3^SB4^SB5"); |
3198
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794 dicom.ReplacePlainString(DICOM_TAG_IMAGE_ORIENTATION_PATIENT, "1\\2.3\\4"); |
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|
795 dicom.ReplacePlainString(DICOM_TAG_IMAGE_POSITION_PATIENT, ""); |
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|
796 |
3581
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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diff
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|
797 DicomWebJsonVisitor visitor; |
3198
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798 dicom.Apply(visitor); |
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|
799 |
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800 { |
3496
109631ed3564
DicomMap::FromDicomWeb()
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801 const Json::Value& tag = visitor.GetResult() ["00200037"]; // ImageOrientationPatient |
3198
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802 const Json::Value& value = tag["Value"]; |
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803 |
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804 ASSERT_EQ(EnumerationToString(ValueRepresentation_DecimalString), tag["vr"].asString()); |
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805 ASSERT_EQ(2u, tag.getMemberNames().size()); |
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806 ASSERT_EQ(3u, value.size()); |
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807 ASSERT_EQ(Json::realValue, value[1].type()); |
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808 ASSERT_FLOAT_EQ(1.0f, value[0].asFloat()); |
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809 ASSERT_FLOAT_EQ(2.3f, value[1].asFloat()); |
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810 ASSERT_FLOAT_EQ(4.0f, value[2].asFloat()); |
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811 } |
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812 |
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813 { |
3496
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814 const Json::Value& tag = visitor.GetResult() ["00200032"]; // ImagePositionPatient |
3198
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815 ASSERT_EQ(EnumerationToString(ValueRepresentation_DecimalString), tag["vr"].asString()); |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
816 ASSERT_EQ(1u, tag.getMemberNames().size()); |
7724ed267b5c
unit testing dicomweb conversion
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diff
changeset
|
817 } |
3201
b69fe409cb4d
dicomweb json to xml
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3200
diff
changeset
|
818 |
3203
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3202
diff
changeset
|
819 std::string xml; |
3201
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dicomweb json to xml
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
820 visitor.FormatXml(xml); |
3496
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
821 |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
822 { |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
823 DicomMap m; |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
824 m.FromDicomWeb(visitor.GetResult()); |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
825 ASSERT_EQ(3u, m.GetSize()); |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
826 |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
827 std::string s; |
3518
a57c8163d9ae
DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3497
diff
changeset
|
828 ASSERT_TRUE(m.LookupStringValue(s, DICOM_TAG_PATIENT_NAME, false)); |
3496
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
829 ASSERT_EQ("SB1^SB2^SB3^SB4^SB5", s); |
3518
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DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
830 ASSERT_TRUE(m.LookupStringValue(s, DICOM_TAG_IMAGE_POSITION_PATIENT, false)); |
3496
109631ed3564
DicomMap::FromDicomWeb()
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parents:
3217
diff
changeset
|
831 ASSERT_TRUE(s.empty()); |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3217
diff
changeset
|
832 |
3518
a57c8163d9ae
DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
833 ASSERT_TRUE(m.LookupStringValue(s, DICOM_TAG_IMAGE_ORIENTATION_PATIENT, false)); |
3496
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
834 |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
835 std::vector<std::string> v; |
3581
4de1b019ca71
unit test DicomWebJson.PixelSpacing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
836 Toolbox::TokenizeString(v, s, '\\'); |
3496
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3217
diff
changeset
|
837 ASSERT_FLOAT_EQ(1.0f, boost::lexical_cast<float>(v[0])); |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
838 ASSERT_FLOAT_EQ(2.3f, boost::lexical_cast<float>(v[1])); |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
839 ASSERT_FLOAT_EQ(4.0f, boost::lexical_cast<float>(v[2])); |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
840 } |
3187
4bbadcd03966
refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
841 } |
4bbadcd03966
refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
842 |
3198
7724ed267b5c
unit testing dicomweb conversion
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parents:
3197
diff
changeset
|
843 |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
844 TEST(DicomWebJson, NullValue) |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
845 { |
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unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
846 // http://dicom.nema.org/medical/dicom/current/output/chtml/part18/sect_F.2.5.html |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3197
diff
changeset
|
847 |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3197
diff
changeset
|
848 ParsedDicomFile dicom(false); |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3197
diff
changeset
|
849 dicom.ReplacePlainString(DICOM_TAG_IMAGE_ORIENTATION_PATIENT, "1.5\\\\\\2.5"); |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
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3197
diff
changeset
|
850 |
3581
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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diff
changeset
|
851 DicomWebJsonVisitor visitor; |
3198
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unit testing dicomweb conversion
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3197
diff
changeset
|
852 dicom.Apply(visitor); |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
853 |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
854 { |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
855 const Json::Value& tag = visitor.GetResult() ["00200037"]; |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
856 const Json::Value& value = tag["Value"]; |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3197
diff
changeset
|
857 |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3197
diff
changeset
|
858 ASSERT_EQ(EnumerationToString(ValueRepresentation_DecimalString), tag["vr"].asString()); |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
859 ASSERT_EQ(2u, tag.getMemberNames().size()); |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
860 ASSERT_EQ(4u, value.size()); |
7724ed267b5c
unit testing dicomweb conversion
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parents:
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diff
changeset
|
861 ASSERT_EQ(Json::realValue, value[0].type()); |
7724ed267b5c
unit testing dicomweb conversion
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parents:
3197
diff
changeset
|
862 ASSERT_EQ(Json::nullValue, value[1].type()); |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
863 ASSERT_EQ(Json::nullValue, value[2].type()); |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
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3197
diff
changeset
|
864 ASSERT_EQ(Json::realValue, value[3].type()); |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3197
diff
changeset
|
865 ASSERT_FLOAT_EQ(1.5f, value[0].asFloat()); |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3197
diff
changeset
|
866 ASSERT_FLOAT_EQ(2.5f, value[3].asFloat()); |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
867 } |
3201
b69fe409cb4d
dicomweb json to xml
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
868 |
3203
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3202
diff
changeset
|
869 std::string xml; |
3201
b69fe409cb4d
dicomweb json to xml
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
870 visitor.FormatXml(xml); |
3496
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
871 |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
872 { |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
873 DicomMap m; |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3217
diff
changeset
|
874 m.FromDicomWeb(visitor.GetResult()); |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
875 ASSERT_EQ(1u, m.GetSize()); |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3217
diff
changeset
|
876 |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3217
diff
changeset
|
877 std::string s; |
3518
a57c8163d9ae
DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3497
diff
changeset
|
878 ASSERT_TRUE(m.LookupStringValue(s, DICOM_TAG_IMAGE_ORIENTATION_PATIENT, false)); |
3496
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
879 |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3217
diff
changeset
|
880 std::vector<std::string> v; |
3581
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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diff
changeset
|
881 Toolbox::TokenizeString(v, s, '\\'); |
3496
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
882 ASSERT_FLOAT_EQ(1.5f, boost::lexical_cast<float>(v[0])); |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
883 ASSERT_TRUE(v[1].empty()); |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
884 ASSERT_TRUE(v[2].empty()); |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
885 ASSERT_FLOAT_EQ(2.5f, boost::lexical_cast<float>(v[3])); |
109631ed3564
DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
886 } |
3198
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unit testing dicomweb conversion
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diff
changeset
|
887 } |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3197
diff
changeset
|
888 |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3197
diff
changeset
|
889 |
3581
4de1b019ca71
unit test DicomWebJson.PixelSpacing
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
890 TEST(DicomWebJson, PixelSpacing) |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
891 { |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
892 // Test related to locales: Make sure that decimal separator is |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
893 // correctly handled (dot "." vs comma ",") |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
894 ParsedDicomFile source(false); |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
895 source.ReplacePlainString(DICOM_TAG_PIXEL_SPACING, "1.5\\1.3"); |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
896 |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
897 DicomWebJsonVisitor visitor; |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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diff
changeset
|
898 source.Apply(visitor); |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
899 |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
900 DicomMap target; |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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diff
changeset
|
901 target.FromDicomWeb(visitor.GetResult()); |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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diff
changeset
|
902 |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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diff
changeset
|
903 ASSERT_EQ("DS", visitor.GetResult() ["00280030"]["vr"].asString()); |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
904 ASSERT_FLOAT_EQ(1.5f, visitor.GetResult() ["00280030"]["Value"][0].asFloat()); |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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diff
changeset
|
905 ASSERT_FLOAT_EQ(1.3f, visitor.GetResult() ["00280030"]["Value"][1].asFloat()); |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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diff
changeset
|
906 |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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diff
changeset
|
907 std::string s; |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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diff
changeset
|
908 ASSERT_TRUE(target.LookupStringValue(s, DICOM_TAG_PIXEL_SPACING, false)); |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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diff
changeset
|
909 ASSERT_EQ(s, "1.5\\1.3"); |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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diff
changeset
|
910 } |
3651
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
911 |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
912 |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
913 TEST(DicomMap, MainTagNames) |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
914 { |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
915 ASSERT_EQ(3, ResourceType_Instance - ResourceType_Patient); |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
916 |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
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parents:
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diff
changeset
|
917 for (int i = ResourceType_Patient; i <= ResourceType_Instance; i++) |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
918 { |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
919 ResourceType level = static_cast<ResourceType>(i); |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
920 |
4932
b7ce2bb6b881
refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4870
diff
changeset
|
921 const std::set<DicomTag>& tags = DicomMap::GetMainDicomTags(level); |
3651
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
922 |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
923 for (std::set<DicomTag>::const_iterator it = tags.begin(); it != tags.end(); ++it) |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
924 { |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
925 DicomMap a; |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
926 a.SetValue(*it, "TEST", false); |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
927 |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
928 Json::Value json; |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
929 a.DumpMainDicomTags(json, level); |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
930 |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
931 ASSERT_EQ(Json::objectValue, json.type()); |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
932 ASSERT_EQ(1u, json.getMemberNames().size()); |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
933 |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
934 std::string name = json.getMemberNames() [0]; |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
935 EXPECT_EQ(name, FromDcmtkBridge::GetTagName(*it, "")); |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
936 |
4696
dd6274412ff4
new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4494
diff
changeset
|
937 std::string main = FromDcmtkBridge::GetTagName(*it, ""); |
3651
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
938 if (!main.empty()) |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
939 { |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
940 ASSERT_EQ(main, name); |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
941 } |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
942 } |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
943 } |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
944 } |
4213
be2eca8b02e1
testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4119
diff
changeset
|
945 |
be2eca8b02e1
testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4119
diff
changeset
|
946 |
be2eca8b02e1
testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4119
diff
changeset
|
947 |
4218
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
948 TEST(DicomTag, Comparisons) |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
949 { |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
950 DicomTag a(0x0000, 0x0000); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
951 DicomTag b(0x0010, 0x0010); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
952 DicomTag c(0x0010, 0x0020); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
953 DicomTag d(0x0020, 0x0000); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
954 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
955 // operator==() |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
956 ASSERT_TRUE(a == a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
957 ASSERT_FALSE(a == b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
958 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
959 // operator!=() |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
960 ASSERT_FALSE(a != a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
961 ASSERT_TRUE(a != b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
962 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
963 // operator<=() |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
964 ASSERT_TRUE(a <= a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
965 ASSERT_TRUE(a <= b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
966 ASSERT_TRUE(a <= c); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
967 ASSERT_TRUE(a <= d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
968 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
969 ASSERT_FALSE(b <= a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
970 ASSERT_TRUE(b <= b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
971 ASSERT_TRUE(b <= c); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
972 ASSERT_TRUE(b <= d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
973 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
974 ASSERT_FALSE(c <= a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
975 ASSERT_FALSE(c <= b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
976 ASSERT_TRUE(c <= c); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
977 ASSERT_TRUE(c <= d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
978 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
979 ASSERT_FALSE(d <= a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
980 ASSERT_FALSE(d <= b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
981 ASSERT_FALSE(d <= c); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
982 ASSERT_TRUE(d <= d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
983 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
984 // operator<() |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
985 ASSERT_FALSE(a < a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
986 ASSERT_TRUE(a < b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
987 ASSERT_TRUE(a < c); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
988 ASSERT_TRUE(a < d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
989 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
990 ASSERT_FALSE(b < a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
991 ASSERT_FALSE(b < b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
992 ASSERT_TRUE(b < c); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
993 ASSERT_TRUE(b < d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
994 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
995 ASSERT_FALSE(c < a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
996 ASSERT_FALSE(c < b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
997 ASSERT_FALSE(c < c); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
998 ASSERT_TRUE(c < d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
999 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1000 ASSERT_FALSE(d < a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1001 ASSERT_FALSE(d < b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1002 ASSERT_FALSE(d < c); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1003 ASSERT_FALSE(d < d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1004 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1005 // operator>=() |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1006 ASSERT_TRUE(a >= a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1007 ASSERT_FALSE(a >= b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1008 ASSERT_FALSE(a >= c); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1009 ASSERT_FALSE(a >= d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1010 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1011 ASSERT_TRUE(b >= a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1012 ASSERT_TRUE(b >= b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1013 ASSERT_FALSE(b >= c); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1014 ASSERT_FALSE(b >= d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1015 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1016 ASSERT_TRUE(c >= a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1017 ASSERT_TRUE(c >= b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1018 ASSERT_TRUE(c >= c); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1019 ASSERT_FALSE(c >= d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1020 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1021 ASSERT_TRUE(d >= a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1022 ASSERT_TRUE(d >= b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1023 ASSERT_TRUE(d >= c); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1024 ASSERT_TRUE(d >= d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1025 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1026 // operator>() |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1027 ASSERT_FALSE(a > a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1028 ASSERT_FALSE(a > b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1029 ASSERT_FALSE(a > c); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1030 ASSERT_FALSE(a > d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1031 |
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1032 ASSERT_TRUE(b > a); |
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1033 ASSERT_FALSE(b > b); |
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1034 ASSERT_FALSE(b > c); |
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1035 ASSERT_FALSE(b > d); |
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1036 |
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1037 ASSERT_TRUE(c > a); |
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1038 ASSERT_TRUE(c > b); |
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1039 ASSERT_FALSE(c > c); |
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1040 ASSERT_FALSE(c > d); |
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1041 |
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1042 ASSERT_TRUE(d > a); |
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1043 ASSERT_TRUE(d > b); |
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1044 ASSERT_TRUE(d > c); |
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1045 ASSERT_FALSE(d > d); |
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1046 } |
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1047 |
4845
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1048 TEST(ParsedDicomFile, canIncludeXsVrTags) |
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1049 { |
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1050 Json::Value tags; |
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1051 tags["0028,0034"] = "1\\1"; // PixelAspectRatio |
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1052 tags["0028,1101"] = "256\\0\\16"; // RedPaletteColorLookupTableDescriptor which is declared as xs VR in dicom.dic |
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1053 |
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1054 std::unique_ptr<ParsedDicomFile> dicom(ParsedDicomFile::CreateFromJson(tags, DicomFromJsonFlags_DecodeDataUriScheme, "")); |
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1055 // simply make sure it does not throw ! |
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1056 } |
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1057 |
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1058 |
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1059 #if ORTHANC_SANDBOXED != 1 |
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1060 |
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1061 #include "../Sources/SystemToolbox.h" |
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1062 |
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1063 TEST(DicomMap, DISABLED_ParseDicomMetaInformation) |
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1064 { |
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1065 static const std::string PATH = "/home/jodogne/Subversion/orthanc-tests/Database/TransferSyntaxes/"; |
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1066 |
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1067 std::map<std::string, DicomTransferSyntax> f; |
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1068 f.insert(std::make_pair(PATH + "../ColorTestMalaterre.dcm", DicomTransferSyntax_LittleEndianImplicit)); // 1.2.840.10008.1.2 |
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1069 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.1.dcm", DicomTransferSyntax_LittleEndianExplicit)); |
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1070 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.2.dcm", DicomTransferSyntax_BigEndianExplicit)); |
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1071 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.4.50.dcm", DicomTransferSyntax_JPEGProcess1)); |
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1072 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.4.51.dcm", DicomTransferSyntax_JPEGProcess2_4)); |
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1073 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.4.57.dcm", DicomTransferSyntax_JPEGProcess14)); |
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1074 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.4.70.dcm", DicomTransferSyntax_JPEGProcess14SV1)); |
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1075 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.4.80.dcm", DicomTransferSyntax_JPEGLSLossless)); |
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1076 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.4.81.dcm", DicomTransferSyntax_JPEGLSLossy)); |
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1077 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.4.90.dcm", DicomTransferSyntax_JPEG2000LosslessOnly)); |
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1078 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.4.91.dcm", DicomTransferSyntax_JPEG2000)); |
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1079 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.5.dcm", DicomTransferSyntax_RLELossless)); |
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1080 |
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1081 for (std::map<std::string, DicomTransferSyntax>::const_iterator it = f.begin(); it != f.end(); ++it) |
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1082 { |
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1083 printf("\n== %s ==\n\n", it->first.c_str()); |
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1084 |
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1085 std::string dicom; |
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1086 SystemToolbox::ReadFile(dicom, it->first, false); |
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1087 |
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1088 DicomMap d; |
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1089 ASSERT_TRUE(DicomMap::ParseDicomMetaInformation(d, dicom.c_str(), dicom.size())); |
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1090 d.Print(stdout); |
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1091 |
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1092 std::string s; |
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1093 ASSERT_TRUE(d.LookupStringValue(s, DICOM_TAG_TRANSFER_SYNTAX_UID, false)); |
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1094 |
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1095 DicomTransferSyntax ts; |
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1096 ASSERT_TRUE(LookupTransferSyntax(ts, s)); |
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1097 ASSERT_EQ(ts, it->second); |
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1098 } |
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1099 } |
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1100 |
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1101 |
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1102 namespace |
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1103 { |
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1104 class V : public DicomStreamReader::IVisitor |
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1105 { |
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1106 private: |
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1107 DicomMap map_; |
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1108 uint64_t pixelDataOffset_; |
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1109 |
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1110 public: |
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1111 V() : |
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1112 pixelDataOffset_(0) |
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1113 { |
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1114 } |
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1115 |
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1116 const DicomMap& GetDicomMap() const |
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1117 { |
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1118 return map_; |
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1119 } |
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1120 |
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1121 virtual void VisitMetaHeaderTag(const DicomTag& tag, |
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1122 const ValueRepresentation& vr, |
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1123 const std::string& value) ORTHANC_OVERRIDE |
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1124 { |
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1125 std::cout << "Header: " << tag.Format() << " [" << Toolbox::ConvertToAscii(value).c_str() << "] (" << value.size() << ")" << std::endl; |
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1126 } |
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1127 |
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1128 virtual void VisitTransferSyntax(DicomTransferSyntax transferSyntax) ORTHANC_OVERRIDE |
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1129 { |
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1130 printf("TRANSFER SYNTAX: %s\n", GetTransferSyntaxUid(transferSyntax)); |
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1131 } |
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1132 |
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1133 virtual bool VisitDatasetTag(const DicomTag& tag, |
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1134 const ValueRepresentation& vr, |
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1135 const std::string& value, |
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1136 bool isLittleEndian, |
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1137 uint64_t fileOffset) ORTHANC_OVERRIDE |
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1138 { |
4215
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1139 if (!isLittleEndian) |
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1140 printf("** "); |
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1141 |
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1142 if (tag == DICOM_TAG_PIXEL_DATA) |
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1143 { |
4216 | 1144 std::cout << "Dataset: " << tag.Format() << " " << EnumerationToString(vr) |
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1145 << " [PIXEL] (" << value.size() << "), offset: " << std::hex << fileOffset << std::dec << std::endl; |
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1146 pixelDataOffset_ = fileOffset; |
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1147 return false; |
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1148 } |
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1149 else |
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1150 { |
4216 | 1151 std::cout << "Dataset: " << tag.Format() << " " << EnumerationToString(vr) |
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1152 << " [" << Toolbox::ConvertToAscii(value).c_str() << "] (" << value.size() |
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1153 << "), offset: " << std::hex << fileOffset << std::dec << std::endl; |
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1154 } |
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1155 |
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1156 map_.SetValue(tag, value, Toolbox::IsAsciiString(value)); |
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1157 |
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1158 return true; |
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1159 } |
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1160 |
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1161 uint64_t GetPixelDataOffset() const |
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1162 { |
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1163 return pixelDataOffset_; |
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1164 } |
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1165 }; |
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1166 } |
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1167 |
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1168 |
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1169 |
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1170 TEST(DicomStreamReader, DISABLED_Tutu) |
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1171 { |
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1172 static const std::string PATH = "/home/jodogne/Subversion/orthanc-tests/Database/TransferSyntaxes/"; |
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1173 |
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1174 typedef std::list< std::pair<std::string, uint64_t> > Sources; |
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1175 |
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1176 Sources sources; |
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1177 sources.push_back(std::make_pair(PATH + "../ColorTestMalaterre.dcm", 0x03a0u)); |
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1178 sources.push_back(std::make_pair(PATH + "1.2.840.10008.1.2.1.dcm", 0x037cu)); |
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1179 sources.push_back(std::make_pair(PATH + "1.2.840.10008.1.2.2.dcm", 0x03e8u)); // Big Endian |
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1180 sources.push_back(std::make_pair(PATH + "1.2.840.10008.1.2.4.50.dcm", 0x04acu)); |
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1181 sources.push_back(std::make_pair(PATH + "1.2.840.10008.1.2.4.51.dcm", 0x072cu)); |
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1182 sources.push_back(std::make_pair(PATH + "1.2.840.10008.1.2.4.57.dcm", 0x0620u)); |
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1183 sources.push_back(std::make_pair(PATH + "1.2.840.10008.1.2.4.70.dcm", 0x065au)); |
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1184 sources.push_back(std::make_pair(PATH + "1.2.840.10008.1.2.4.80.dcm", 0x0b46u)); |
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1185 sources.push_back(std::make_pair(PATH + "1.2.840.10008.1.2.4.81.dcm", 0x073eu)); |
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1186 sources.push_back(std::make_pair(PATH + "1.2.840.10008.1.2.4.90.dcm", 0x0b66u)); |
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1187 sources.push_back(std::make_pair(PATH + "1.2.840.10008.1.2.4.91.dcm", 0x19b8u)); |
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1188 sources.push_back(std::make_pair(PATH + "1.2.840.10008.1.2.5.dcm", 0x0b0au)); |
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1189 |
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1190 { |
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1191 std::string dicom; |
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1192 |
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1193 uint64_t offset; |
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1194 // Not a DICOM image |
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1195 SystemToolbox::ReadFile(dicom, PATH + "1.2.840.10008.1.2.4.50.png", false); |
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1196 ASSERT_FALSE(DicomStreamReader::LookupPixelDataOffset(offset, dicom)); |
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1197 |
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1198 // Image without valid DICOM preamble |
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1199 SystemToolbox::ReadFile(dicom, PATH + "1.2.840.10008.1.2.dcm", false); |
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1200 ASSERT_FALSE(DicomStreamReader::LookupPixelDataOffset(offset, dicom)); |
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1201 } |
4216 | 1202 |
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1203 for (Sources::const_iterator it = sources.begin(); it != sources.end(); ++it) |
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1204 { |
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1205 std::string dicom; |
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1206 SystemToolbox::ReadFile(dicom, it->first, false); |
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1207 |
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1208 { |
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1209 uint64_t offset; |
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1210 ASSERT_TRUE(DicomStreamReader::LookupPixelDataOffset(offset, dicom)); |
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1211 ASSERT_EQ(it->second, offset); |
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1212 } |
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1213 |
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1214 { |
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1215 uint64_t offset; |
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1216 ASSERT_TRUE(DicomStreamReader::LookupPixelDataOffset(offset, dicom.c_str(), dicom.size())); |
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1217 ASSERT_EQ(it->second, offset); |
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1218 } |
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1219 |
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1220 ParsedDicomFile a(dicom); |
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1221 Json::Value aa; |
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1222 a.DatasetToJson(aa, DicomToJsonFormat_Short, DicomToJsonFlags_Default, 0); |
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1223 |
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1224 std::stringstream stream; |
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1225 size_t pos = 0; |
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1226 |
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1227 DicomStreamReader r(stream); |
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1228 V visitor; |
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1229 |
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1230 // Test reading byte per byte |
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1231 while (pos < dicom.size() && |
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1232 !r.IsDone()) |
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1233 { |
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1234 r.Consume(visitor); |
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1235 stream.clear(); |
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1236 stream.put(dicom[pos++]); |
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1237 } |
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1238 |
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1239 r.Consume(visitor); |
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1240 |
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1241 ASSERT_EQ(it->second, visitor.GetPixelDataOffset()); |
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1242 |
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1243 // Truncate the original DICOM up to pixel data |
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1244 dicom.resize(visitor.GetPixelDataOffset()); |
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1245 |
4493
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1246 ParsedDicomFile b(dicom); |
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1247 Json::Value bb; |
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1248 b.DatasetToJson(bb, DicomToJsonFormat_Short, DicomToJsonFlags_Default, 0); |
4214
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1249 |
4493
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|
1250 aa.removeMember("7fe0,0010"); |
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|
1251 aa.removeMember("fffc,fffc"); // For "1.2.840.10008.1.2.5.dcm" |
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1252 ASSERT_EQ(aa.toStyledString(), bb.toStyledString()); |
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1253 } |
4214
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1254 } |
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|
1255 |
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1256 TEST(DicomStreamReader, DISABLED_Tutu2) |
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1257 { |
4223 | 1258 //static const std::string PATH = "/home/jodogne/Subversion/orthanc-tests/Database/TransferSyntaxes/"; |
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1259 |
4218
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1260 //const std::string path = PATH + "1.2.840.10008.1.2.4.50.dcm"; |
4217 | 1261 //const std::string path = PATH + "1.2.840.10008.1.2.2.dcm"; |
4218
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1262 const std::string path = "/home/jodogne/Subversion/orthanc-tests/Database/HierarchicalAnonymization/RTH/RT.dcm"; |
4217 | 1263 |
1264 std::ifstream stream(path.c_str()); | |
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1265 |
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1266 DicomStreamReader r(stream); |
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1267 V visitor; |
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1268 |
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1269 r.Consume(visitor); |
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1270 |
4223 | 1271 printf(">> %d\n", static_cast<int>(r.GetProcessedBytes())); |
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1272 } |
4218
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1273 |
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1274 |
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1275 #include <boost/filesystem.hpp> |
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1276 |
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1277 TEST(DicomStreamReader, DISABLED_Tutu3) |
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1278 { |
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1279 static const std::string PATH = "/home/jodogne/Subversion/orthanc-tests/Database/"; |
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1280 |
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1281 std::set<std::string> errors; |
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1282 unsigned int success = 0; |
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1283 |
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1284 for (boost::filesystem::recursive_directory_iterator current(PATH), end; |
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1285 current != end ; ++current) |
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|
1286 { |
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1287 if (SystemToolbox::IsRegularFile(current->path().string())) |
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1288 { |
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1289 try |
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|
1290 { |
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|
1291 if (current->path().extension() == ".dcm") |
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|
1292 { |
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|
1293 const std::string path = current->path().string(); |
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1294 printf("[%s]\n", path.c_str()); |
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|
1295 |
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1296 DicomMap m1; |
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1297 |
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|
1298 { |
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1299 std::ifstream stream(path.c_str()); |
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1300 |
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|
1301 DicomStreamReader r(stream); |
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|
1302 V visitor; |
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1303 |
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1304 try |
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1305 { |
4220
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1306 r.Consume(visitor, DICOM_TAG_PIXEL_DATA); |
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|
1307 //r.Consume(visitor); |
4218
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1308 success++; |
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1309 } |
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|
1310 catch (OrthancException& e) |
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1311 { |
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1312 errors.insert(path); |
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1313 continue; |
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1314 } |
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1315 |
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1316 m1.Assign(visitor.GetDicomMap()); |
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1317 } |
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1318 |
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1319 m1.SetValue(DICOM_TAG_PIXEL_DATA, "", true); |
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1320 |
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1321 |
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1322 DicomMap m2; |
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1323 |
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1324 { |
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1325 std::string dicom; |
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1326 SystemToolbox::ReadFile(dicom, path); |
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1327 |
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1328 ParsedDicomFile f(dicom); |
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1329 f.ExtractDicomSummary(m2, 256); |
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1330 } |
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1331 |
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1332 std::set<DicomTag> tags; |
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1333 m2.GetTags(tags); |
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1334 |
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1335 bool first = true; |
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1336 for (std::set<DicomTag>::const_iterator it = tags.begin(); it != tags.end(); ++it) |
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1337 { |
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1338 if (!m1.HasTag(*it)) |
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1339 { |
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1340 if (first) |
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1341 { |
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1342 fprintf(stderr, "[%s]\n", path.c_str()); |
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1343 first = false; |
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1344 } |
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1345 |
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1346 std::cerr << "ERROR: " << it->Format() << std::endl; |
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1347 } |
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1348 else if (!m2.GetValue(*it).IsNull() && |
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1349 !m2.GetValue(*it).IsBinary() && |
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1350 Toolbox::IsAsciiString(m1.GetValue(*it).GetContent())) |
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1351 { |
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1352 const std::string& v1 = m1.GetValue(*it).GetContent(); |
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1353 const std::string& v2 = m2.GetValue(*it).GetContent(); |
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1354 |
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1355 if (v1 != v2 && |
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1356 (v1.size() != v2.size() + 1 || |
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1357 v1.substr(0, v2.size()) != v2)) |
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1358 { |
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1359 std::cerr << "ERROR: [" << v1 << "] [" << v2 << "]" << std::endl; |
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1360 } |
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1361 } |
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1362 } |
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1363 } |
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1364 } |
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1365 catch (boost::filesystem::filesystem_error&) |
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1366 { |
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1367 } |
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1368 } |
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1369 } |
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1370 |
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1371 |
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1372 printf("\n== ERRORS ==\n"); |
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1373 for (std::set<std::string>::const_iterator |
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1374 it = errors.begin(); it != errors.end(); ++it) |
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1375 { |
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1376 printf("[%s]\n", it->c_str()); |
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1377 } |
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1378 |
4223 | 1379 printf("\n== SUCCESSES: %u ==\n\n", success); |
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1380 } |
4325
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1381 |
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1382 #endif |