Mercurial > hg > orthanc

annotate OrthancServer/OrthancMoveRequestHandler.cpp @ 3361:ea07b29c6d0e emscripten-logging

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Merge fro default
author Benjamin Golinvaux <bgo@osimis.io>
date Tue, 07 May 2019 13:10:48 +0200
parents 6ce10c3b1eb7
children 94f4a18a79cc
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2019 Osimis S.A., Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU General Public License as
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9 * published by the Free Software Foundation, either version 3 of the
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10 * License, or (at your option) any later version.
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11 *
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12 * In addition, as a special exception, the copyright holders of this
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13 * program give permission to link the code of its release with the
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14 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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15 * that use the same license as the "OpenSSL" library), and distribute
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16 * the linked executables. You must obey the GNU General Public License
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17 * in all respects for all of the code used other than "OpenSSL". If you
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18 * modify file(s) with this exception, you may extend this exception to
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19 * your version of the file(s), but you are not obligated to do so. If
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20 * you do not wish to do so, delete this exception statement from your
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21 * version. If you delete this exception statement from all source files
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22 * in the program, then also delete it here.
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23 *
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24 * This program is distributed in the hope that it will be useful, but
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25 * WITHOUT ANY WARRANTY; without even the implied warranty of
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26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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27 * General Public License for more details.
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28 *
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29 * You should have received a copy of the GNU General Public License
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30 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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31 **/
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32
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33
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34 #include "PrecompiledHeadersServer.h"
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35 #include "OrthancMoveRequestHandler.h"
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36
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37 #include "../../Core/DicomParsing/FromDcmtkBridge.h"
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38 #include "../Core/DicomFormat/DicomArray.h"
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39 #include "../Core/Logging.h"
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40 #include "../Core/MetricsRegistry.h"
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41 #include "OrthancConfiguration.h"
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42 #include "ServerContext.h"
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43 #include "ServerJobs/DicomModalityStoreJob.h"
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44
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45
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46 namespace Orthanc
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47 {
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48 namespace
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49 {
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50 // Anonymous namespace to avoid clashes between compilation modules
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51
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52 class SynchronousMove : public IMoveRequestIterator
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53 {
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54 private:
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55 ServerContext& context_;
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56 const std::string& localAet_;
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57 std::vector<std::string> instances_;
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58 size_t position_;
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59 RemoteModalityParameters remote_;
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60 std::string originatorAet_;
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61 uint16_t originatorId_;
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62 std::auto_ptr<DicomUserConnection> connection_;
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63
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64 public:
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65 SynchronousMove(ServerContext& context,
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66 const std::string& targetAet,
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67 const std::vector<std::string>& publicIds,
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68 const std::string& originatorAet,
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69 uint16_t originatorId) :
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70 context_(context),
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71 localAet_(context.GetDefaultLocalApplicationEntityTitle()),
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72 position_(0),
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73 originatorAet_(originatorAet),
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74 originatorId_(originatorId)
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75 {
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76 {
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77 OrthancConfiguration::ReaderLock lock;
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78 remote_ = lock.GetConfiguration().GetModalityUsingAet(targetAet);
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79 }
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81 for (size_t i = 0; i < publicIds.size(); i++)
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82 {
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83 LOG(INFO) << "Sending resource " << publicIds[i] << " to modality \""
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84 << targetAet << "\" in synchronous mode";
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86 std::list<std::string> tmp;
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87 context_.GetIndex().GetChildInstances(tmp, publicIds[i]);
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89 instances_.reserve(tmp.size());
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90 for (std::list<std::string>::iterator it = tmp.begin(); it != tmp.end(); ++it)
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91 {
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92 instances_.push_back(*it);
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93 }
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94 }
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95 }
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96
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97 virtual unsigned int GetSubOperationCount() const
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98 {
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99 return instances_.size();
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100 }
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101
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102 virtual Status DoNext()
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103 {
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104 if (position_ >= instances_.size())
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105 {
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106 return Status_Failure;
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107 }
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108
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109 const std::string& id = instances_[position_++];
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110
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111 std::string dicom;
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112 context_.ReadDicom(dicom, id);
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113
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114 if (connection_.get() == NULL)
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115 {
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116 connection_.reset(new DicomUserConnection(localAet_, remote_));
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117 }
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118
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119 connection_->Store(dicom, originatorAet_, originatorId_);
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120
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121 return Status_Success;
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122 }
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123 };
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124
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125
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126 class AsynchronousMove : public IMoveRequestIterator
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127 {
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128 private:
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129 ServerContext& context_;
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130 std::auto_ptr<DicomModalityStoreJob> job_;
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131 size_t position_;
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132 size_t countInstances_;
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133
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134 public:
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135 AsynchronousMove(ServerContext& context,
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136 const std::string& targetAet,
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137 const std::vector<std::string>& publicIds,
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138 const std::string& originatorAet,
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139 uint16_t originatorId) :
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140 context_(context),
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141 job_(new DicomModalityStoreJob(context)),
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142 position_(0)
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143 {
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144 job_->SetDescription("C-MOVE");
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145 job_->SetPermissive(true);
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146 job_->SetLocalAet(context.GetDefaultLocalApplicationEntityTitle());
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147
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148 {
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149 OrthancConfiguration::ReaderLock lock;
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150 job_->SetRemoteModality(lock.GetConfiguration().GetModalityUsingAet(targetAet));
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151 }
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152
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153 if (originatorId != 0)
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154 {
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155 job_->SetMoveOriginator(originatorAet, originatorId);
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156 }
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157
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158 for (size_t i = 0; i < publicIds.size(); i++)
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159 {
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160 LOG(INFO) << "Sending resource " << publicIds[i] << " to modality \""
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161 << targetAet << "\" in asynchronous mode";
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162
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163 std::list<std::string> tmp;
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diff changeset
164 context_.GetIndex().GetChildInstances(tmp, publicIds[i]);
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165
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diff changeset
166 countInstances_ = tmp.size();
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167
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168 job_->Reserve(job_->GetCommandsCount() + tmp.size());
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169
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170 for (std::list<std::string>::iterator it = tmp.begin(); it != tmp.end(); ++it)
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171 {
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172 job_->AddInstance(*it);
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173 }
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174 }
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175 }
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176
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177 virtual unsigned int GetSubOperationCount() const
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178 {
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diff changeset
179 return countInstances_;
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180 }
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181
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182 virtual Status DoNext()
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183 {
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184 if (position_ >= countInstances_)
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185 {
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186 return Status_Failure;
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187 }
8a9eb767280c Fix issue #128 (Asynchronous C-MOVE: invalid number of remaining sub-operations)
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diff changeset
188
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189 if (position_ == 0)
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diff changeset
190 {
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diff changeset
191 context_.GetJobsEngine().GetRegistry().Submit(job_.release(), 0 /* priority */);
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192 }
3157
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diff changeset
193
8a9eb767280c Fix issue #128 (Asynchronous C-MOVE: invalid number of remaining sub-operations)
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diff changeset
194 position_ ++;
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diff changeset
195 return Status_Success;
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196 }
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diff changeset
197 };
619
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198 }
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diff changeset
199
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diff changeset
200
3301
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diff changeset
201 bool OrthancMoveRequestHandler::LookupIdentifiers(std::vector<std::string>& publicIds,
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diff changeset
202 ResourceType level,
6ce10c3b1eb7 Fix issue #131 (C-MOVE failure due to duplicate StudyInstanceUID in the database)
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diff changeset
203 const DicomMap& input)
619
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204 {
1724
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diff changeset
205 DicomTag tag(0, 0); // Dummy initialization
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diff changeset
206
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diff changeset
207 switch (level)
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diff changeset
208 {
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diff changeset
209 case ResourceType_Patient:
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diff changeset
210 tag = DICOM_TAG_PATIENT_ID;
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diff changeset
211 break;
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diff changeset
212
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diff changeset
213 case ResourceType_Study:
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diff changeset
214 tag = (input.HasTag(DICOM_TAG_ACCESSION_NUMBER) ?
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diff changeset
215 DICOM_TAG_ACCESSION_NUMBER : DICOM_TAG_STUDY_INSTANCE_UID);
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diff changeset
216 break;
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diff changeset
217
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diff changeset
218 case ResourceType_Series:
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diff changeset
219 tag = DICOM_TAG_SERIES_INSTANCE_UID;
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diff changeset
220 break;
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diff changeset
221
7e0b5e413c7c C-Move SCP for studies using AccessionNumber tag
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diff changeset
222 case ResourceType_Instance:
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diff changeset
223 tag = DICOM_TAG_SOP_INSTANCE_UID;
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diff changeset
224 break;
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diff changeset
225
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diff changeset
226 default:
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diff changeset
227 throw OrthancException(ErrorCode_ParameterOutOfRange);
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diff changeset
228 }
1721
3bcb01028107 removed another flavor of ServerIndex::LookupIdentifier
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diff changeset
229
619
70d0f27e5bd3 refactoring
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diff changeset
230 if (!input.HasTag(tag))
70d0f27e5bd3 refactoring
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diff changeset
231 {
70d0f27e5bd3 refactoring
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diff changeset
232 return false;
70d0f27e5bd3 refactoring
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diff changeset
233 }
70d0f27e5bd3 refactoring
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parents:
diff changeset
234
1737
ec66a16aa398 removal of DicomStringValue and DicomNullValue
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diff changeset
235 const DicomValue& value = input.GetValue(tag);
ec66a16aa398 removal of DicomStringValue and DicomNullValue
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diff changeset
236 if (value.IsNull() ||
ec66a16aa398 removal of DicomStringValue and DicomNullValue
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diff changeset
237 value.IsBinary())
ec66a16aa398 removal of DicomStringValue and DicomNullValue
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diff changeset
238 {
ec66a16aa398 removal of DicomStringValue and DicomNullValue
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diff changeset
239 return false;
ec66a16aa398 removal of DicomStringValue and DicomNullValue
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diff changeset
240 }
619
70d0f27e5bd3 refactoring
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parents:
diff changeset
241 else
70d0f27e5bd3 refactoring
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parents:
diff changeset
242 {
3301
6ce10c3b1eb7 Fix issue #131 (C-MOVE failure due to duplicate StudyInstanceUID in the database)
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diff changeset
243 const std::string& content = value.GetContent();
6ce10c3b1eb7 Fix issue #131 (C-MOVE failure due to duplicate StudyInstanceUID in the database)
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diff changeset
244 context_.GetIndex().LookupIdentifierExact(publicIds, level, tag, content);
619
70d0f27e5bd3 refactoring
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diff changeset
245 return true;
70d0f27e5bd3 refactoring
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parents:
diff changeset
246 }
70d0f27e5bd3 refactoring
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parents:
diff changeset
247 }
70d0f27e5bd3 refactoring
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parents:
diff changeset
248
70d0f27e5bd3 refactoring
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parents:
diff changeset
249
2625
5469dda691cd new configuration option: SynchronousCMove
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diff changeset
250 static IMoveRequestIterator* CreateIterator(ServerContext& context,
5469dda691cd new configuration option: SynchronousCMove
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diff changeset
251 const std::string& targetAet,
3301
6ce10c3b1eb7 Fix issue #131 (C-MOVE failure due to duplicate StudyInstanceUID in the database)
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diff changeset
252 const std::vector<std::string>& publicIds,
2625
5469dda691cd new configuration option: SynchronousCMove
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diff changeset
253 const std::string& originatorAet,
5469dda691cd new configuration option: SynchronousCMove
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diff changeset
254 uint16_t originatorId)
5469dda691cd new configuration option: SynchronousCMove
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diff changeset
255 {
3301
6ce10c3b1eb7 Fix issue #131 (C-MOVE failure due to duplicate StudyInstanceUID in the database)
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diff changeset
256 if (publicIds.empty())
6ce10c3b1eb7 Fix issue #131 (C-MOVE failure due to duplicate StudyInstanceUID in the database)
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diff changeset
257 {
6ce10c3b1eb7 Fix issue #131 (C-MOVE failure due to duplicate StudyInstanceUID in the database)
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diff changeset
258 throw OrthancException(ErrorCode_BadRequest,
6ce10c3b1eb7 Fix issue #131 (C-MOVE failure due to duplicate StudyInstanceUID in the database)
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diff changeset
259 "C-MOVE request matching no resource stored in Orthanc");
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260 }
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261
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262 bool synchronous;
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263
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264 {
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265 OrthancConfiguration::ReaderLock lock;
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266 synchronous = lock.GetConfiguration().GetBooleanParameter("SynchronousCMove", true);
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267 }
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268
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269 if (synchronous)
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270 {
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271 return new SynchronousMove(context, targetAet, publicIds, originatorAet, originatorId);
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272 }
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273 else
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274 {
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275 return new AsynchronousMove(context, targetAet, publicIds, originatorAet, originatorId);
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276 }
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277 }
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278
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279
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280 IMoveRequestIterator* OrthancMoveRequestHandler::Handle(const std::string& targetAet,
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281 const DicomMap& input,
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282 const std::string& originatorIp,
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283 const std::string& originatorAet,
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284 const std::string& calledAet,
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285 uint16_t originatorId)
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286 {
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287 MetricsRegistry::Timer timer(context_.GetMetricsRegistry(), "orthanc_move_scp_duration_ms");
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288
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289 LOG(WARNING) << "Move-SCU request received for AET \"" << targetAet << "\"";
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290
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291 {
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292 DicomArray query(input);
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293 for (size_t i = 0; i < query.GetSize(); i++)
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294 {
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295 if (!query.GetElement(i).GetValue().IsNull())
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296 {
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297 LOG(INFO) << " " << query.GetElement(i).GetTag()
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298 << " " << FromDcmtkBridge::GetTagName(query.GetElement(i))
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299 << " = " << query.GetElement(i).GetValue().GetContent();
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300 }
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301 }
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302 }
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303
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304 /**
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305 * Retrieve the query level.
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306 **/
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307
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308 const DicomValue* levelTmp = input.TestAndGetValue(DICOM_TAG_QUERY_RETRIEVE_LEVEL);
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309
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310 if (levelTmp == NULL ||
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311 levelTmp->IsNull() ||
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312 levelTmp->IsBinary())
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313 {
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314 // The query level is not present in the C-Move request, which
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315 // does not follow the DICOM standard. This is for instance the
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316 // behavior of Tudor DICOM. Try and automatically deduce the
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317 // query level: Start from the instance level, going up to the
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318 // patient level until a valid DICOM identifier is found.
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319
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320 std::vector<std::string> publicIds;
1231
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321
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322 if (LookupIdentifiers(publicIds, ResourceType_Instance, input) ||
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323 LookupIdentifiers(publicIds, ResourceType_Series, input) ||
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324 LookupIdentifiers(publicIds, ResourceType_Study, input) ||
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325 LookupIdentifiers(publicIds, ResourceType_Patient, input))
1231
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diff changeset
326 {
3301
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327 return CreateIterator(context_, targetAet, publicIds, originatorAet, originatorId);
1231
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328 }
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329 else
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330 {
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331 // No identifier is present in the request.
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332 throw OrthancException(ErrorCode_BadRequest, "Invalid fields in a C-MOVE request");
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333 }
619
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334 }
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diff changeset
335
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diff changeset
336 assert(levelTmp != NULL);
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diff changeset
337 ResourceType level = StringToResourceType(levelTmp->GetContent().c_str());
1231
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diff changeset
338
619
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339
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340 /**
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341 * Lookup for the resource to be sent.
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342 **/
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diff changeset
343
3301
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diff changeset
344 std::vector<std::string> publicIds;
619
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diff changeset
345
3301
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diff changeset
346 if (LookupIdentifiers(publicIds, level, input))
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diff changeset
347 {
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diff changeset
348 return CreateIterator(context_, targetAet, publicIds, originatorAet, originatorId);
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349 }
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diff changeset
350 else
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diff changeset
351 {
3301
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diff changeset
352 throw OrthancException(ErrorCode_BadRequest, "Invalid fields in a C-MOVE request");
619
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353 }
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diff changeset
354 }
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diff changeset
355 }