Mercurial > hg > orthanc
annotate Core/SystemToolbox.cpp @ 2902:e80b38fb22c6
fix ImageProcessing::Set() for subregions
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Tue, 23 Oct 2018 12:05:19 +0200 |
parents | f790999a250a |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2018 Osimis S.A., Belgium |
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6 * |
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7 * This program is free software: you can redistribute it and/or |
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8 * modify it under the terms of the GNU General Public License as |
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9 * published by the Free Software Foundation, either version 3 of the |
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10 * License, or (at your option) any later version. |
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11 * |
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12 * In addition, as a special exception, the copyright holders of this |
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13 * program give permission to link the code of its release with the |
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14 * OpenSSL project's "OpenSSL" library (or with modified versions of it |
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15 * that use the same license as the "OpenSSL" library), and distribute |
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16 * the linked executables. You must obey the GNU General Public License |
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17 * in all respects for all of the code used other than "OpenSSL". If you |
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18 * modify file(s) with this exception, you may extend this exception to |
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19 * your version of the file(s), but you are not obligated to do so. If |
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20 * you do not wish to do so, delete this exception statement from your |
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21 * version. If you delete this exception statement from all source files |
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22 * in the program, then also delete it here. |
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23 * |
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24 * This program is distributed in the hope that it will be useful, but |
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25 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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27 * General Public License for more details. |
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28 * |
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29 * You should have received a copy of the GNU General Public License |
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30 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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31 **/ |
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32 |
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33 |
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34 #include "PrecompiledHeaders.h" |
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35 #include "SystemToolbox.h" |
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36 |
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37 |
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38 #if defined(_WIN32) |
2173 | 39 # include <windows.h> |
40 # include <process.h> // For "_spawnvp()" and "_getpid()" | |
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41 #else |
2173 | 42 # include <unistd.h> // For "execvp()" |
43 # include <sys/wait.h> // For "waitpid()" | |
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44 #endif |
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45 |
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47 #if defined(__APPLE__) && defined(__MACH__) |
2173 | 48 # include <mach-o/dyld.h> /* _NSGetExecutablePath */ |
49 # include <limits.h> /* PATH_MAX */ | |
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50 #endif |
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51 |
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53 #if defined(__linux__) || defined(__FreeBSD_kernel__) || defined(__FreeBSD__) |
2173 | 54 # include <limits.h> /* PATH_MAX */ |
55 # include <signal.h> | |
56 # include <unistd.h> | |
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57 #endif |
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58 |
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59 |
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61 # include <sys/sysctl.h> // For "sysctl", "CTL_KERN" and "KERN_PROC_ARGS" | |
62 #endif | |
63 | |
64 | |
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65 #include "Logging.h" |
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66 #include "OrthancException.h" |
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67 #include "Toolbox.h" |
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68 |
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69 #include <boost/filesystem.hpp> |
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70 #include <boost/filesystem/fstream.hpp> |
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71 #include <boost/date_time/posix_time/posix_time.hpp> |
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72 #include <boost/thread.hpp> |
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73 |
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74 |
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75 namespace Orthanc |
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76 { |
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77 static bool finish_; |
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78 static ServerBarrierEvent barrierEvent_; |
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79 |
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80 #if defined(_WIN32) |
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81 static BOOL WINAPI ConsoleControlHandler(DWORD dwCtrlType) |
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82 { |
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83 // http://msdn.microsoft.com/en-us/library/ms683242(v=vs.85).aspx |
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84 finish_ = true; |
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85 return true; |
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86 } |
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87 #else |
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88 static void SignalHandler(int signal) |
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89 { |
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90 if (signal == SIGHUP) |
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91 { |
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92 barrierEvent_ = ServerBarrierEvent_Reload; |
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93 } |
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94 |
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95 finish_ = true; |
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96 } |
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97 #endif |
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98 |
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99 |
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100 static ServerBarrierEvent ServerBarrierInternal(const bool* stopFlag) |
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101 { |
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102 #if defined(_WIN32) |
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103 SetConsoleCtrlHandler(ConsoleControlHandler, true); |
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104 #else |
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105 signal(SIGINT, SignalHandler); |
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106 signal(SIGQUIT, SignalHandler); |
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107 signal(SIGTERM, SignalHandler); |
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108 signal(SIGHUP, SignalHandler); |
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109 #endif |
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110 |
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111 // Active loop that awakens every 100ms |
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112 finish_ = false; |
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113 barrierEvent_ = ServerBarrierEvent_Stop; |
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114 while (!(*stopFlag || finish_)) |
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115 { |
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116 SystemToolbox::USleep(100 * 1000); |
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117 } |
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118 |
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119 #if defined(_WIN32) |
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120 SetConsoleCtrlHandler(ConsoleControlHandler, false); |
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121 #else |
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122 signal(SIGINT, NULL); |
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123 signal(SIGQUIT, NULL); |
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124 signal(SIGTERM, NULL); |
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125 signal(SIGHUP, NULL); |
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126 #endif |
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127 |
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128 return barrierEvent_; |
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129 } |
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130 |
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131 |
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132 ServerBarrierEvent SystemToolbox::ServerBarrier(const bool& stopFlag) |
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133 { |
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134 return ServerBarrierInternal(&stopFlag); |
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135 } |
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136 |
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137 |
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138 ServerBarrierEvent SystemToolbox::ServerBarrier() |
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139 { |
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140 const bool stopFlag = false; |
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141 return ServerBarrierInternal(&stopFlag); |
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142 } |
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143 |
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144 |
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145 void SystemToolbox::USleep(uint64_t microSeconds) |
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146 { |
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147 #if defined(_WIN32) |
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148 ::Sleep(static_cast<DWORD>(microSeconds / static_cast<uint64_t>(1000))); |
2364 | 149 #elif defined(__linux__) || defined(__APPLE__) || defined(__FreeBSD_kernel__) || defined(__FreeBSD__) || defined(__OpenBSD__) || defined(__native_client__) |
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150 usleep(microSeconds); |
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151 #else |
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152 #error Support your platform here |
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153 #endif |
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154 } |
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155 |
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156 |
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157 static std::streamsize GetStreamSize(std::istream& f) |
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158 { |
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159 // http://www.cplusplus.com/reference/iostream/istream/tellg/ |
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160 f.seekg(0, std::ios::end); |
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161 std::streamsize size = f.tellg(); |
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162 f.seekg(0, std::ios::beg); |
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163 |
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164 return size; |
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165 } |
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166 |
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167 |
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168 void SystemToolbox::ReadFile(std::string& content, |
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169 const std::string& path) |
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170 { |
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171 if (!IsRegularFile(path)) |
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172 { |
2503 | 173 LOG(ERROR) << "The path does not point to a regular file: " << path; |
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174 throw OrthancException(ErrorCode_RegularFileExpected); |
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175 } |
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176 |
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177 boost::filesystem::ifstream f; |
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178 f.open(path, std::ifstream::in | std::ifstream::binary); |
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179 if (!f.good()) |
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180 { |
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181 throw OrthancException(ErrorCode_InexistentFile); |
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182 } |
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183 |
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184 std::streamsize size = GetStreamSize(f); |
2332 | 185 content.resize(static_cast<size_t>(size)); |
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186 if (size != 0) |
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187 { |
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188 f.read(reinterpret_cast<char*>(&content[0]), size); |
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189 } |
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190 |
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191 f.close(); |
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192 } |
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193 |
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194 |
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195 bool SystemToolbox::ReadHeader(std::string& header, |
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196 const std::string& path, |
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197 size_t headerSize) |
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198 { |
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199 if (!IsRegularFile(path)) |
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200 { |
2503 | 201 LOG(ERROR) << "The path does not point to a regular file: " << path; |
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202 throw OrthancException(ErrorCode_RegularFileExpected); |
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203 } |
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204 |
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205 boost::filesystem::ifstream f; |
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206 f.open(path, std::ifstream::in | std::ifstream::binary); |
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207 if (!f.good()) |
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208 { |
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209 throw OrthancException(ErrorCode_InexistentFile); |
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210 } |
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211 |
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212 bool full = true; |
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213 |
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214 { |
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215 std::streamsize size = GetStreamSize(f); |
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216 if (size <= 0) |
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217 { |
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218 headerSize = 0; |
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219 full = false; |
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220 } |
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221 else if (static_cast<size_t>(size) < headerSize) |
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222 { |
2332 | 223 headerSize = static_cast<size_t>(size); // Truncate to the size of the file |
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224 full = false; |
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225 } |
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226 } |
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227 |
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228 header.resize(headerSize); |
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229 if (headerSize != 0) |
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230 { |
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231 f.read(reinterpret_cast<char*>(&header[0]), headerSize); |
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232 } |
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233 |
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234 f.close(); |
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235 |
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236 return full; |
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237 } |
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238 |
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239 |
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240 void SystemToolbox::WriteFile(const void* content, |
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241 size_t size, |
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242 const std::string& path) |
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243 { |
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244 boost::filesystem::ofstream f; |
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245 f.open(path, std::ofstream::out | std::ofstream::binary); |
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246 if (!f.good()) |
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247 { |
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248 throw OrthancException(ErrorCode_CannotWriteFile); |
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249 } |
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250 |
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251 if (size != 0) |
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252 { |
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253 f.write(reinterpret_cast<const char*>(content), size); |
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254 |
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255 if (!f.good()) |
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256 { |
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257 f.close(); |
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258 throw OrthancException(ErrorCode_FileStorageCannotWrite); |
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259 } |
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260 } |
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261 |
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262 f.close(); |
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263 } |
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264 |
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265 |
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266 void SystemToolbox::WriteFile(const std::string& content, |
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267 const std::string& path) |
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268 { |
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269 WriteFile(content.size() > 0 ? content.c_str() : NULL, |
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270 content.size(), path); |
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271 } |
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272 |
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273 |
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274 void SystemToolbox::RemoveFile(const std::string& path) |
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275 { |
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276 if (boost::filesystem::exists(path)) |
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277 { |
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278 if (IsRegularFile(path)) |
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279 { |
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280 boost::filesystem::remove(path); |
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281 } |
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282 else |
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283 { |
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284 throw OrthancException(ErrorCode_RegularFileExpected); |
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285 } |
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286 } |
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287 } |
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288 |
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289 |
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290 uint64_t SystemToolbox::GetFileSize(const std::string& path) |
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291 { |
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292 try |
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293 { |
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294 return static_cast<uint64_t>(boost::filesystem::file_size(path)); |
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295 } |
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296 catch (boost::filesystem::filesystem_error&) |
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297 { |
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298 throw OrthancException(ErrorCode_InexistentFile); |
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299 } |
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300 } |
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301 |
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302 |
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303 void SystemToolbox::MakeDirectory(const std::string& path) |
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304 { |
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305 if (boost::filesystem::exists(path)) |
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306 { |
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307 if (!boost::filesystem::is_directory(path)) |
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308 { |
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309 throw OrthancException(ErrorCode_DirectoryOverFile); |
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310 } |
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311 } |
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312 else |
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313 { |
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314 if (!boost::filesystem::create_directories(path)) |
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315 { |
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316 throw OrthancException(ErrorCode_MakeDirectory); |
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317 } |
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318 } |
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319 } |
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320 |
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321 |
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322 bool SystemToolbox::IsExistingFile(const std::string& path) |
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323 { |
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324 return boost::filesystem::exists(path); |
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325 } |
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326 |
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327 |
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328 #if defined(_WIN32) |
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329 static std::string GetPathToExecutableInternal() |
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330 { |
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331 // Yes, this is ugly, but there is no simple way to get the |
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332 // required buffer size, so we use a big constant |
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333 std::vector<char> buffer(32768); |
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334 /*int bytes =*/ GetModuleFileNameA(NULL, &buffer[0], static_cast<DWORD>(buffer.size() - 1)); |
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335 return std::string(&buffer[0]); |
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336 } |
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337 |
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338 #elif defined(__linux__) || defined(__FreeBSD_kernel__) || defined(__FreeBSD__) |
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339 static std::string GetPathToExecutableInternal() |
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340 { |
2365 | 341 // NOTE: For FreeBSD, using KERN_PROC_PATHNAME might be a better alternative |
342 | |
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343 std::vector<char> buffer(PATH_MAX + 1); |
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344 ssize_t bytes = readlink("/proc/self/exe", &buffer[0], buffer.size() - 1); |
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345 if (bytes == 0) |
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346 { |
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347 throw OrthancException(ErrorCode_PathToExecutable); |
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348 } |
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349 |
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350 return std::string(&buffer[0]); |
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351 } |
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352 |
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353 #elif defined(__APPLE__) && defined(__MACH__) |
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354 static std::string GetPathToExecutableInternal() |
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355 { |
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356 char pathbuf[PATH_MAX + 1]; |
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357 unsigned int bufsize = static_cast<int>(sizeof(pathbuf)); |
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358 |
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359 _NSGetExecutablePath( pathbuf, &bufsize); |
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360 |
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361 return std::string(pathbuf); |
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362 } |
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363 |
2364 | 364 #elif defined(__OpenBSD__) |
365 static std::string GetPathToExecutableInternal() | |
366 { | |
2365 | 367 // This is an adapted version of the patch proposed in issue #64 |
368 // without an explicit call to "malloc()" to prevent memory leak | |
369 // https://bitbucket.org/sjodogne/orthanc/issues/64/add-openbsd-support | |
370 // https://stackoverflow.com/q/31494901/881731 | |
371 | |
372 const int mib[4] = { CTL_KERN, KERN_PROC_ARGS, getpid(), KERN_PROC_ARGV }; | |
373 | |
374 size_t len; | |
375 if (sysctl(mib, 4, NULL, &len, NULL, 0) == -1) | |
376 { | |
377 throw OrthancException(ErrorCode_PathToExecutable); | |
378 } | |
379 | |
380 std::string tmp; | |
381 tmp.resize(len); | |
382 | |
383 char** buffer = reinterpret_cast<char**>(&tmp[0]); | |
384 | |
385 if (sysctl(mib, 4, buffer, &len, NULL, 0) == -1) | |
386 { | |
387 throw OrthancException(ErrorCode_PathToExecutable); | |
388 } | |
389 else | |
390 { | |
391 return std::string(buffer[0]); | |
392 } | |
2364 | 393 } |
394 | |
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395 #else |
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396 #error Support your platform here |
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397 #endif |
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398 |
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399 |
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400 std::string SystemToolbox::GetPathToExecutable() |
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401 { |
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402 boost::filesystem::path p(GetPathToExecutableInternal()); |
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403 return boost::filesystem::absolute(p).string(); |
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404 } |
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405 |
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406 |
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407 std::string SystemToolbox::GetDirectoryOfExecutable() |
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408 { |
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409 boost::filesystem::path p(GetPathToExecutableInternal()); |
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410 return boost::filesystem::absolute(p.parent_path()).string(); |
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411 } |
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412 |
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413 |
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414 void SystemToolbox::ExecuteSystemCommand(const std::string& command, |
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415 const std::vector<std::string>& arguments) |
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416 { |
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417 // Convert the arguments as a C array |
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418 std::vector<char*> args(arguments.size() + 2); |
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419 |
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420 args.front() = const_cast<char*>(command.c_str()); |
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421 |
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422 for (size_t i = 0; i < arguments.size(); i++) |
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423 { |
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424 args[i + 1] = const_cast<char*>(arguments[i].c_str()); |
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425 } |
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426 |
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427 args.back() = NULL; |
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428 |
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429 int status; |
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430 |
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431 #if defined(_WIN32) |
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432 // http://msdn.microsoft.com/en-us/library/275khfab.aspx |
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433 status = static_cast<int>(_spawnvp(_P_OVERLAY, command.c_str(), &args[0])); |
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434 |
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435 #else |
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436 int pid = fork(); |
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437 |
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438 if (pid == -1) |
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439 { |
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440 // Error in fork() |
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441 #if ORTHANC_ENABLE_LOGGING == 1 |
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442 LOG(ERROR) << "Cannot fork a child process"; |
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443 #endif |
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444 |
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445 throw OrthancException(ErrorCode_SystemCommand); |
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446 } |
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447 else if (pid == 0) |
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448 { |
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449 // Execute the system command in the child process |
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450 execvp(command.c_str(), &args[0]); |
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451 |
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452 // We should never get here |
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453 _exit(1); |
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454 } |
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455 else |
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456 { |
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457 // Wait for the system command to exit |
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458 waitpid(pid, &status, 0); |
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459 } |
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460 #endif |
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461 |
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462 if (status != 0) |
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463 { |
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464 #if ORTHANC_ENABLE_LOGGING == 1 |
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465 LOG(ERROR) << "System command failed with status code " << status; |
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466 #endif |
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467 |
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468 throw OrthancException(ErrorCode_SystemCommand); |
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469 } |
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470 } |
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471 |
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472 |
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473 int SystemToolbox::GetProcessId() |
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474 { |
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475 #if defined(_WIN32) |
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476 return static_cast<int>(_getpid()); |
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477 #else |
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478 return static_cast<int>(getpid()); |
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479 #endif |
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480 } |
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481 |
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482 |
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483 bool SystemToolbox::IsRegularFile(const std::string& path) |
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484 { |
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485 namespace fs = boost::filesystem; |
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486 |
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487 try |
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488 { |
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489 if (fs::exists(path)) |
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490 { |
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491 fs::file_status status = fs::status(path); |
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492 return (status.type() == boost::filesystem::regular_file || |
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493 status.type() == boost::filesystem::reparse_file); // Fix BitBucket issue #11 |
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494 } |
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495 } |
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496 catch (fs::filesystem_error&) |
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497 { |
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498 } |
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499 |
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500 return false; |
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501 } |
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502 |
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503 |
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504 FILE* SystemToolbox::OpenFile(const std::string& path, |
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505 FileMode mode) |
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506 { |
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507 #if defined(_WIN32) |
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508 // TODO Deal with special characters by converting to the current locale |
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509 #endif |
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510 |
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511 const char* m; |
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512 switch (mode) |
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513 { |
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514 case FileMode_ReadBinary: |
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515 m = "rb"; |
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516 break; |
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517 |
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518 case FileMode_WriteBinary: |
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519 m = "wb"; |
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520 break; |
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521 |
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522 default: |
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523 throw OrthancException(ErrorCode_ParameterOutOfRange); |
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524 } |
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525 |
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526 return fopen(path.c_str(), m); |
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527 } |
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528 |
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529 |
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530 static boost::posix_time::ptime GetNow(bool utc) |
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531 { |
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532 if (utc) |
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533 { |
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534 return boost::posix_time::second_clock::universal_time(); |
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535 } |
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536 else |
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537 { |
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538 return boost::posix_time::second_clock::local_time(); |
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539 } |
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540 } |
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541 |
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542 |
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543 std::string SystemToolbox::GetNowIsoString(bool utc) |
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544 { |
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545 return boost::posix_time::to_iso_string(GetNow(utc)); |
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546 } |
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547 |
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548 |
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549 void SystemToolbox::GetNowDicom(std::string& date, |
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550 std::string& time, |
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551 bool utc) |
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552 { |
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553 boost::posix_time::ptime now = GetNow(utc); |
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554 tm tm = boost::posix_time::to_tm(now); |
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555 |
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556 char s[32]; |
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557 sprintf(s, "%04d%02d%02d", tm.tm_year + 1900, tm.tm_mon + 1, tm.tm_mday); |
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558 date.assign(s); |
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559 |
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560 // TODO milliseconds |
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561 sprintf(s, "%02d%02d%02d.%06d", tm.tm_hour, tm.tm_min, tm.tm_sec, 0); |
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562 time.assign(s); |
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563 } |
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564 |
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565 |
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566 unsigned int SystemToolbox::GetHardwareConcurrency() |
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567 { |
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568 // Get the number of available hardware threads (e.g. number of |
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569 // CPUs or cores or hyperthreading units) |
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570 unsigned int threads = boost::thread::hardware_concurrency(); |
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571 |
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572 if (threads <= 0) |
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573 { |
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574 return 1; |
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575 } |
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576 else |
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577 { |
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578 return threads; |
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579 } |
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580 } |
2143
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581 } |