Mercurial > hg > orthanc
annotate OrthancServer/Search/DatabaseLookup.cpp @ 3494:e0e9df6e5c92
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author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Mon, 19 Aug 2019 10:59:10 +0200 |
parents | cf8cbeb35f33 |
children | 94f4a18a79cc |
rev | line source |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2019 Osimis S.A., Belgium |
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6 * |
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7 * This program is free software: you can redistribute it and/or |
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8 * modify it under the terms of the GNU General Public License as |
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9 * published by the Free Software Foundation, either version 3 of the |
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10 * License, or (at your option) any later version. |
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11 * |
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12 * In addition, as a special exception, the copyright holders of this |
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13 * program give permission to link the code of its release with the |
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14 * OpenSSL project's "OpenSSL" library (or with modified versions of it |
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15 * that use the same license as the "OpenSSL" library), and distribute |
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16 * the linked executables. You must obey the GNU General Public License |
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17 * in all respects for all of the code used other than "OpenSSL". If you |
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18 * modify file(s) with this exception, you may extend this exception to |
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19 * your version of the file(s), but you are not obligated to do so. If |
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20 * you do not wish to do so, delete this exception statement from your |
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21 * version. If you delete this exception statement from all source files |
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22 * in the program, then also delete it here. |
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23 * |
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24 * This program is distributed in the hope that it will be useful, but |
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25 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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27 * General Public License for more details. |
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28 * |
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29 * You should have received a copy of the GNU General Public License |
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30 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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31 **/ |
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32 |
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33 |
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34 #include "../PrecompiledHeadersServer.h" |
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35 #include "DatabaseLookup.h" |
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36 |
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37 #include "../ServerToolbox.h" |
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38 #include "../../Core/DicomParsing/FromDcmtkBridge.h" |
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39 #include "../../Core/DicomParsing/ToDcmtkBridge.h" |
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40 #include "../../Core/OrthancException.h" |
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41 #include "../../Core/Toolbox.h" |
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42 |
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43 namespace Orthanc |
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44 { |
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45 DatabaseLookup::~DatabaseLookup() |
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46 { |
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47 for (size_t i = 0; i < constraints_.size(); i++) |
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48 { |
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49 assert(constraints_[i] != NULL); |
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50 delete constraints_[i]; |
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51 } |
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52 } |
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53 |
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54 |
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55 const DicomTagConstraint& DatabaseLookup::GetConstraint(size_t index) const |
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56 { |
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57 if (index >= constraints_.size()) |
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58 { |
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59 throw OrthancException(ErrorCode_ParameterOutOfRange); |
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60 } |
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61 else |
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62 { |
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63 assert(constraints_[index] != NULL); |
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64 return *constraints_[index]; |
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65 } |
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66 } |
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67 |
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68 |
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69 void DatabaseLookup::AddConstraint(DicomTagConstraint* constraint) |
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70 { |
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71 if (constraint == NULL) |
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72 { |
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73 throw OrthancException(ErrorCode_NullPointer); |
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74 } |
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75 else |
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76 { |
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77 constraints_.push_back(constraint); |
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78 } |
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79 } |
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80 |
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81 |
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82 bool DatabaseLookup::IsMatch(const DicomMap& value) const |
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83 { |
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84 for (size_t i = 0; i < constraints_.size(); i++) |
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85 { |
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86 assert(constraints_[i] != NULL); |
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87 if (!constraints_[i]->IsMatch(value)) |
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88 { |
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89 return false; |
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90 } |
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91 } |
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92 |
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93 return true; |
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94 } |
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95 |
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96 |
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97 bool DatabaseLookup::IsMatch(DcmItem& item, |
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98 Encoding encoding, |
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99 bool hasCodeExtensions) const |
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100 { |
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101 for (size_t i = 0; i < constraints_.size(); i++) |
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102 { |
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103 assert(constraints_[i] != NULL); |
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104 |
3072 | 105 const bool isOptionalConstraint = !constraints_[i]->IsMandatory(); |
106 const DcmTagKey tag = ToDcmtkBridge::Convert(constraints_[i]->GetTag()); | |
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107 |
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108 DcmElement* element = NULL; |
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109 if (!item.findAndGetElement(tag, element).good()) |
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110 { |
3072 | 111 return isOptionalConstraint; |
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112 } |
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113 |
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114 if (element == NULL) |
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115 { |
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116 return false; |
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117 } |
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118 |
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119 std::set<DicomTag> ignoreTagLength; |
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120 std::auto_ptr<DicomValue> value(FromDcmtkBridge::ConvertLeafElement |
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121 (*element, DicomToJsonFlags_None, |
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122 0, encoding, hasCodeExtensions, ignoreTagLength)); |
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123 |
3072 | 124 // WARNING: Also modify "HierarchicalMatcher::Setup()" if modifying this code |
125 if (value.get() == NULL || | |
126 value->IsNull()) | |
127 { | |
128 return isOptionalConstraint; | |
129 } | |
130 else if (value->IsBinary() || | |
131 !constraints_[i]->IsMatch(value->GetContent())) | |
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132 { |
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133 return false; |
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134 } |
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135 } |
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136 |
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137 return true; |
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138 } |
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139 |
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140 |
3027 | 141 void DatabaseLookup::AddDicomConstraintInternal(const DicomTag& tag, |
142 ValueRepresentation vr, | |
143 const std::string& dicomQuery, | |
144 bool caseSensitive, | |
145 bool mandatoryTag) | |
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146 { |
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147 if ((vr == ValueRepresentation_Date || |
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148 vr == ValueRepresentation_DateTime || |
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149 vr == ValueRepresentation_Time) && |
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150 dicomQuery.find('-') != std::string::npos) |
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151 { |
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152 /** |
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153 * Range matching is only defined for TM, DA and DT value |
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154 * representations. This code fixes issues 35 and 37. |
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155 * |
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156 * Reference: "Range matching is not defined for types of |
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157 * Attributes other than dates and times", DICOM PS 3.4, |
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158 * C.2.2.2.5 ("Range Matching"). |
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159 **/ |
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160 size_t separator = dicomQuery.find('-'); |
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161 std::string lower = dicomQuery.substr(0, separator); |
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162 std::string upper = dicomQuery.substr(separator + 1); |
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163 |
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164 if (!lower.empty()) |
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165 { |
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166 AddConstraint(new DicomTagConstraint |
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167 (tag, ConstraintType_GreaterOrEqual, lower, caseSensitive, mandatoryTag)); |
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168 } |
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169 |
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170 if (!upper.empty()) |
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171 { |
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172 AddConstraint(new DicomTagConstraint |
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173 (tag, ConstraintType_SmallerOrEqual, upper, caseSensitive, mandatoryTag)); |
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174 } |
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175 } |
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176 else if (tag == DICOM_TAG_MODALITIES_IN_STUDY || |
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177 dicomQuery.find('\\') != std::string::npos) |
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178 { |
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179 DicomTag fixedTag(tag); |
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180 |
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181 if (tag == DICOM_TAG_MODALITIES_IN_STUDY) |
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182 { |
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183 // http://www.itk.org/Wiki/DICOM_QueryRetrieve_Explained |
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184 // http://dicomiseasy.blogspot.be/2012/01/dicom-queryretrieve-part-i.html |
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185 fixedTag = DICOM_TAG_MODALITY; |
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186 } |
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187 |
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188 std::auto_ptr<DicomTagConstraint> constraint |
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189 (new DicomTagConstraint(fixedTag, ConstraintType_List, caseSensitive, mandatoryTag)); |
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190 |
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191 std::vector<std::string> items; |
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192 Toolbox::TokenizeString(items, dicomQuery, '\\'); |
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193 |
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194 for (size_t i = 0; i < items.size(); i++) |
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195 { |
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196 constraint->AddValue(items[i]); |
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197 } |
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198 |
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199 AddConstraint(constraint.release()); |
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200 } |
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201 else if (dicomQuery.find('*') != std::string::npos || |
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202 dicomQuery.find('?') != std::string::npos) |
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203 { |
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204 AddConstraint(new DicomTagConstraint |
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205 (tag, ConstraintType_Wildcard, dicomQuery, caseSensitive, mandatoryTag)); |
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206 } |
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207 else |
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208 { |
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209 AddConstraint(new DicomTagConstraint |
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210 (tag, ConstraintType_Equal, dicomQuery, caseSensitive, mandatoryTag)); |
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211 } |
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212 } |
3027 | 213 |
214 | |
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215 void DatabaseLookup::AddDicomConstraint(const DicomTag& tag, |
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216 const std::string& dicomQuery, |
3027 | 217 bool caseSensitivePN, |
218 bool mandatoryTag) | |
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219 { |
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220 ValueRepresentation vr = FromDcmtkBridge::LookupValueRepresentation(tag); |
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221 |
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222 if (vr == ValueRepresentation_Sequence) |
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223 { |
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224 throw OrthancException(ErrorCode_ParameterOutOfRange); |
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225 } |
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226 |
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227 /** |
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228 * DICOM specifies that searches must always be case sensitive, |
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229 * except for tags with a PN value representation. For PN, Orthanc |
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230 * uses the configuration option "CaseSensitivePN" to decide |
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231 * whether matching is case-sensitive or case-insensitive. |
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232 * |
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233 * Reference: DICOM PS 3.4 |
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234 * - C.2.2.2.1 ("Single Value Matching") |
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235 * - C.2.2.2.4 ("Wild Card Matching") |
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236 * http://medical.nema.org/Dicom/2011/11_04pu.pdf |
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237 * |
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238 * "Except for Attributes with a PN Value Representation, only |
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239 * entities with values which match exactly the value specified in the |
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240 * request shall match. This matching is case-sensitive, i.e., |
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241 * sensitive to the exact encoding of the key attribute value in |
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242 * character sets where a letter may have multiple encodings (e.g., |
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243 * based on its case, its position in a word, or whether it is |
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244 * accented) |
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245 * |
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246 * For Attributes with a PN Value Representation (e.g., Patient Name |
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247 * (0010,0010)), an application may perform literal matching that is |
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248 * either case-sensitive, or that is insensitive to some or all |
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249 * aspects of case, position, accent, or other character encoding |
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250 * variants." |
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251 * |
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252 * (0008,0018) UI SOPInstanceUID => Case-sensitive |
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253 * (0008,0050) SH AccessionNumber => Case-sensitive |
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254 * (0010,0020) LO PatientID => Case-sensitive |
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255 * (0020,000D) UI StudyInstanceUID => Case-sensitive |
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256 * (0020,000E) UI SeriesInstanceUID => Case-sensitive |
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257 **/ |
3027 | 258 |
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259 if (vr == ValueRepresentation_PersonName) |
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260 { |
3027 | 261 AddDicomConstraintInternal(tag, vr, dicomQuery, caseSensitivePN, mandatoryTag); |
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262 } |
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263 else |
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264 { |
3027 | 265 AddDicomConstraintInternal(tag, vr, dicomQuery, true /* case sensitive */, mandatoryTag); |
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266 } |
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267 } |
3027 | 268 |
269 | |
270 void DatabaseLookup::AddRestConstraint(const DicomTag& tag, | |
271 const std::string& dicomQuery, | |
272 bool caseSensitive, | |
273 bool mandatoryTag) | |
274 { | |
275 AddDicomConstraintInternal(tag, FromDcmtkBridge::LookupValueRepresentation(tag), | |
276 dicomQuery, caseSensitive, mandatoryTag); | |
277 } | |
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278 |
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279 |
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280 bool DatabaseLookup::HasOnlyMainDicomTags() const |
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281 { |
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282 std::set<DicomTag> mainTags; |
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283 DicomMap::GetMainDicomTags(mainTags); |
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284 |
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285 for (size_t i = 0; i < constraints_.size(); i++) |
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286 { |
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287 assert(constraints_[i] != NULL); |
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288 |
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289 if (mainTags.find(constraints_[i]->GetTag()) == mainTags.end()) |
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290 { |
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291 // This is not a main DICOM tag |
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292 return false; |
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293 } |
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294 } |
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295 |
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296 return true; |
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297 } |
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298 } |