Mercurial > hg > orthanc
annotate OrthancFramework/Sources/DicomNetworking/DicomFindAnswers.cpp @ 4087:dcf4d83374a6 framework
integration mainline->framework
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
|---|---|
| date | Fri, 26 Jun 2020 09:47:51 +0200 |
| parents | d25f4c0fa160 |
| children | bf7b9edf6b81 |
| rev | line source |
|---|---|
| 0 | 1 /** |
| 62 | 2 * Orthanc - A Lightweight, RESTful DICOM Store |
| 1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium |
| 0 | 6 * |
| 7 * This program is free software: you can redistribute it and/or | |
| 8 * modify it under the terms of the GNU General Public License as | |
| 9 * published by the Free Software Foundation, either version 3 of the | |
| 10 * License, or (at your option) any later version. | |
| 136 | 11 * |
| 12 * In addition, as a special exception, the copyright holders of this | |
| 13 * program give permission to link the code of its release with the | |
| 14 * OpenSSL project's "OpenSSL" library (or with modified versions of it | |
| 15 * that use the same license as the "OpenSSL" library), and distribute | |
| 16 * the linked executables. You must obey the GNU General Public License | |
| 17 * in all respects for all of the code used other than "OpenSSL". If you | |
| 18 * modify file(s) with this exception, you may extend this exception to | |
| 19 * your version of the file(s), but you are not obligated to do so. If | |
| 20 * you do not wish to do so, delete this exception statement from your | |
| 21 * version. If you delete this exception statement from all source files | |
| 22 * in the program, then also delete it here. | |
| 0 | 23 * |
| 24 * This program is distributed in the hope that it will be useful, but | |
| 25 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
| 27 * General Public License for more details. | |
| 28 * | |
| 29 * You should have received a copy of the GNU General Public License | |
| 30 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
| 31 **/ | |
| 32 | |
| 33 | |
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34 #include "../PrecompiledHeaders.h" |
| 0 | 35 #include "DicomFindAnswers.h" |
| 36 | |
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37 #include "../DicomParsing/FromDcmtkBridge.h" |
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38 #include "../OrthancException.h" |
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39 |
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40 #include <memory> |
| 1789 | 41 #include <dcmtk/dcmdata/dcfilefo.h> |
| 1847 | 42 #include <boost/noncopyable.hpp> |
| 1789 | 43 |
| 0 | 44 |
| 62 | 45 namespace Orthanc |
| 0 | 46 { |
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47 void DicomFindAnswers::AddAnswerInternal(ParsedDicomFile* answer) |
| 1789 | 48 { |
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49 std::unique_ptr<ParsedDicomFile> protection(answer); |
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50 |
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51 if (isWorklist_) |
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52 { |
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53 // These lines are necessary when serving worklists, otherwise |
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54 // Orthanc does not behave as "wlmscpfs" |
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55 protection->Remove(DICOM_TAG_MEDIA_STORAGE_SOP_INSTANCE_UID); |
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56 protection->Remove(DICOM_TAG_SOP_INSTANCE_UID); |
| 1789 | 57 } |
| 58 | |
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59 protection->ChangeEncoding(encoding_); |
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60 |
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61 answers_.push_back(protection.release()); |
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62 } |
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63 |
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64 |
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65 DicomFindAnswers::DicomFindAnswers(bool isWorklist) : |
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66 encoding_(GetDefaultDicomEncoding()), |
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67 isWorklist_(isWorklist), |
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68 complete_(true) |
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69 { |
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70 } |
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71 |
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72 |
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73 void DicomFindAnswers::SetEncoding(Encoding encoding) |
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74 { |
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75 for (size_t i = 0; i < answers_.size(); i++) |
| 1789 | 76 { |
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77 assert(answers_[i] != NULL); |
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78 answers_[i]->ChangeEncoding(encoding); |
| 1789 | 79 } |
| 80 | |
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81 encoding_ = encoding; |
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82 } |
| 1789 | 83 |
| 84 | |
| 2059 | 85 void DicomFindAnswers::SetWorklist(bool isWorklist) |
| 86 { | |
| 87 if (answers_.empty()) | |
| 88 { | |
| 89 isWorklist_ = isWorklist; | |
| 90 } | |
| 91 else | |
| 92 { | |
| 93 // This set of answers is not empty anymore, cannot change its type | |
| 94 throw OrthancException(ErrorCode_BadSequenceOfCalls); | |
| 95 } | |
| 96 } | |
| 97 | |
| 98 | |
| 0 | 99 void DicomFindAnswers::Clear() |
| 100 { | |
| 1789 | 101 for (size_t i = 0; i < answers_.size(); i++) |
| 0 | 102 { |
| 1789 | 103 assert(answers_[i] != NULL); |
| 104 delete answers_[i]; | |
| 0 | 105 } |
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106 |
| 1789 | 107 answers_.clear(); |
| 0 | 108 } |
| 109 | |
| 1789 | 110 |
| 0 | 111 void DicomFindAnswers::Reserve(size_t size) |
| 112 { | |
| 1789 | 113 if (size > answers_.size()) |
| 0 | 114 { |
| 1789 | 115 answers_.reserve(size); |
| 0 | 116 } |
| 117 } | |
| 118 | |
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119 |
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120 void DicomFindAnswers::Add(const DicomMap& map) |
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121 { |
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122 // We use the permissive mode to be tolerant wrt. invalid DICOM |
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123 // files that contain some tags with out-of-range values (such |
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124 // tags are removed from the answers) |
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125 AddAnswerInternal(new ParsedDicomFile(map, encoding_, true /* permissive */)); |
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126 //"" /* no private creator */)); |
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127 } |
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128 |
| 1789 | 129 |
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130 void DicomFindAnswers::Add(ParsedDicomFile& dicom) |
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131 { |
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132 AddAnswerInternal(dicom.Clone(true)); |
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133 } |
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134 |
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135 void DicomFindAnswers::Add(const void* dicom, |
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136 size_t size) |
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137 { |
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138 AddAnswerInternal(new ParsedDicomFile(dicom, size)); |
| 1789 | 139 } |
| 140 | |
| 141 | |
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142 ParsedDicomFile& DicomFindAnswers::GetAnswer(size_t index) const |
| 1789 | 143 { |
| 144 if (index < answers_.size()) | |
| 145 { | |
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146 return *answers_[index]; |
| 1789 | 147 } |
| 148 else | |
| 149 { | |
| 150 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
| 151 } | |
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152 } |
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153 |
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154 |
| 1789 | 155 DcmDataset* DicomFindAnswers::ExtractDcmDataset(size_t index) const |
| 156 { | |
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157 // As "DicomFindAnswers" stores its content using class |
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158 // "ParsedDicomFile" (that internally uses "DcmFileFormat" from |
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159 // DCMTK), the dataset can contain tags that are reserved if |
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160 // storing the media on the disk, notably tag |
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161 // "MediaStorageSOPClassUID" (0002,0002). In this function, we |
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162 // remove all those tags whose group is below 0x0008. The |
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163 // resulting data set is clean for emission in the C-FIND SCP. |
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164 |
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165 // http://dicom.nema.org/medical/dicom/current/output/chtml/part04/sect_C.4.html#sect_C.4.1.1.3 |
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166 // https://groups.google.com/d/msg/orthanc-users/D3kpPuX8yV0/_zgHOzkMEQAJ |
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167 |
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168 DcmDataset& source = *GetAnswer(index).GetDcmtkObject().getDataset(); |
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169 |
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170 std::unique_ptr<DcmDataset> target(new DcmDataset); |
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171 |
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172 for (unsigned long i = 0; i < source.card(); i++) |
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173 { |
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174 const DcmElement* element = source.getElement(i); |
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175 assert(element != NULL); |
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176 |
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177 if (element != NULL && |
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178 element->getTag().getGroup() >= 0x0008 && |
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179 element->getTag().getElement() != 0x0000) |
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180 { |
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181 target->insert(dynamic_cast<DcmElement*>(element->clone())); |
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182 } |
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183 } |
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184 |
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185 return target.release(); |
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186 } |
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187 |
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188 |
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189 void DicomFindAnswers::ToJson(Json::Value& target, |
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190 size_t index, |
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191 bool simplify) const |
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192 { |
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193 DicomToJsonFormat format = (simplify ? DicomToJsonFormat_Human : DicomToJsonFormat_Full); |
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194 GetAnswer(index).DatasetToJson(target, format, DicomToJsonFlags_None, 0); |
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195 } |
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196 |
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197 |
| 1368 | 198 void DicomFindAnswers::ToJson(Json::Value& target, |
| 199 bool simplify) const | |
| 0 | 200 { |
| 201 target = Json::arrayValue; | |
| 202 | |
| 203 for (size_t i = 0; i < GetSize(); i++) | |
| 204 { | |
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205 Json::Value answer; |
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206 ToJson(answer, i, simplify); |
| 0 | 207 target.append(answer); |
| 208 } | |
| 209 } | |
| 210 } |