Mercurial > hg > orthanc
annotate OrthancServer/Sources/OrthancRestApi/OrthancRestResources.cpp @ 4602:cfdd1f59ff6f db-changes
fix OrthancCDatabasePlugin.h
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
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| date | Mon, 22 Mar 2021 19:25:27 +0100 |
| parents | bec74e29f86b |
| children | 95ffe3b6ef7c |
| rev | line source |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
| 1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2021 Osimis S.A., Belgium |
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6 * |
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7 * This program is free software: you can redistribute it and/or |
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8 * modify it under the terms of the GNU General Public License as |
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9 * published by the Free Software Foundation, either version 3 of the |
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10 * License, or (at your option) any later version. |
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11 * |
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12 * In addition, as a special exception, the copyright holders of this |
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13 * program give permission to link the code of its release with the |
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14 * OpenSSL project's "OpenSSL" library (or with modified versions of it |
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15 * that use the same license as the "OpenSSL" library), and distribute |
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16 * the linked executables. You must obey the GNU General Public License |
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17 * in all respects for all of the code used other than "OpenSSL". If you |
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18 * modify file(s) with this exception, you may extend this exception to |
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19 * your version of the file(s), but you are not obligated to do so. If |
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20 * you do not wish to do so, delete this exception statement from your |
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21 * version. If you delete this exception statement from all source files |
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22 * in the program, then also delete it here. |
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23 * |
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24 * This program is distributed in the hope that it will be useful, but |
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25 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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27 * General Public License for more details. |
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28 * |
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29 * You should have received a copy of the GNU General Public License |
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30 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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31 **/ |
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32 |
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33 |
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34 #include "../PrecompiledHeadersServer.h" |
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35 #include "OrthancRestApi.h" |
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36 |
| 4045 | 37 #include "../../../OrthancFramework/Sources/Compression/GzipCompressor.h" |
| 38 #include "../../../OrthancFramework/Sources/DicomFormat/DicomImageInformation.h" | |
| 39 #include "../../../OrthancFramework/Sources/DicomParsing/DicomWebJsonVisitor.h" | |
| 40 #include "../../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" | |
| 41 #include "../../../OrthancFramework/Sources/DicomParsing/Internals/DicomImageDecoder.h" | |
| 42 #include "../../../OrthancFramework/Sources/HttpServer/HttpContentNegociation.h" | |
| 43 #include "../../../OrthancFramework/Sources/Images/Image.h" | |
| 44 #include "../../../OrthancFramework/Sources/Images/ImageProcessing.h" | |
| 45 #include "../../../OrthancFramework/Sources/Logging.h" | |
| 46 #include "../../../OrthancFramework/Sources/MultiThreading/Semaphore.h" | |
| 47 | |
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48 #include "../OrthancConfiguration.h" |
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49 #include "../Search/DatabaseLookup.h" |
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50 #include "../ServerContext.h" |
| 2131 | 51 #include "../ServerToolbox.h" |
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52 #include "../SliceOrdering.h" |
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53 |
| 3687 | 54 // This "include" is mandatory for Release builds using Linux Standard Base |
| 55 #include <boost/math/special_functions/round.hpp> | |
| 56 | |
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57 |
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58 /** |
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59 * This semaphore is used to limit the number of concurrent HTTP |
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60 * requests on CPU-intensive routes of the REST API, in order to |
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61 * prevent exhaustion of resources (new in Orthanc 1.7.0). |
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62 **/ |
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63 static Orthanc::Semaphore throttlingSemaphore_(4); // TODO => PARAMETER? |
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64 |
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65 |
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66 namespace Orthanc |
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67 { |
| 4415 | 68 static std::string GetDocumentationSampleResource(ResourceType type) |
| 69 { | |
| 70 switch (type) | |
| 71 { | |
| 72 case Orthanc::ResourceType_Instance: | |
| 73 return "https://demo.orthanc-server.com/instances/d94d9a03-3003b047-a4affc69-322313b2-680530a2"; | |
| 74 break; | |
| 75 | |
| 76 case Orthanc::ResourceType_Series: | |
| 77 return "https://demo.orthanc-server.com/series/37836232-d13a2350-fa1dedc5-962b31aa-010f8e52"; | |
| 78 break; | |
| 79 | |
| 80 case Orthanc::ResourceType_Study: | |
| 81 return "https://demo.orthanc-server.com/studies/27f7126f-4f66fb14-03f4081b-f9341db2-53925988"; | |
| 82 break; | |
| 83 | |
| 84 case Orthanc::ResourceType_Patient: | |
| 85 return "https://demo.orthanc-server.com/patients/46e6332c-677825b6-202fcf7c-f787bc5f-7b07c382"; | |
| 86 break; | |
| 87 | |
| 88 default: | |
| 89 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
| 90 } | |
| 91 } | |
| 92 | |
| 93 | |
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94 static void AnswerDicomAsJson(RestApiCall& call, |
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95 const Json::Value& dicom, |
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96 DicomToJsonFormat mode) |
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97 { |
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98 if (mode != DicomToJsonFormat_Full) |
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99 { |
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100 Json::Value simplified; |
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101 Toolbox::SimplifyDicomAsJson(simplified, dicom, mode); |
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102 call.GetOutput().AnswerJson(simplified); |
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103 } |
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104 else |
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105 { |
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106 call.GetOutput().AnswerJson(dicom); |
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107 } |
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108 } |
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109 |
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110 |
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111 static DicomToJsonFormat GetDicomFormat(const RestApiGetCall& call) |
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112 { |
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113 if (call.HasArgument("simplify")) |
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114 { |
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115 return DicomToJsonFormat_Human; |
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116 } |
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117 else if (call.HasArgument("short")) |
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118 { |
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119 return DicomToJsonFormat_Short; |
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120 } |
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121 else |
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122 { |
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123 return DicomToJsonFormat_Full; |
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124 } |
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125 } |
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126 |
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127 |
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128 static void AnswerDicomAsJson(RestApiGetCall& call, |
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129 const Json::Value& dicom) |
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130 { |
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131 AnswerDicomAsJson(call, dicom, GetDicomFormat(call)); |
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132 } |
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133 |
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134 |
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135 static void ParseSetOfTags(std::set<DicomTag>& target, |
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136 const RestApiGetCall& call, |
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137 const std::string& argument) |
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138 { |
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139 target.clear(); |
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140 |
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141 if (call.HasArgument(argument)) |
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142 { |
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143 std::vector<std::string> tags; |
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144 Toolbox::TokenizeString(tags, call.GetArgument(argument, ""), ','); |
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145 |
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146 for (size_t i = 0; i < tags.size(); i++) |
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147 { |
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148 target.insert(FromDcmtkBridge::ParseTag(tags[i])); |
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149 } |
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150 } |
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151 } |
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152 |
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153 |
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154 // List all the patients, studies, series or instances ---------------------- |
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155 |
| 1354 | 156 static void AnswerListOfResources(RestApiOutput& output, |
| 157 ServerIndex& index, | |
| 158 const std::list<std::string>& resources, | |
| 159 ResourceType level, | |
| 160 bool expand) | |
| 161 { | |
| 162 Json::Value answer = Json::arrayValue; | |
| 163 | |
| 164 for (std::list<std::string>::const_iterator | |
| 1384 | 165 resource = resources.begin(); resource != resources.end(); ++resource) |
| 1354 | 166 { |
| 167 if (expand) | |
| 168 { | |
| 4554 | 169 Json::Value expanded; |
| 170 if (index.ExpandResource(expanded, *resource, level)) | |
| 1354 | 171 { |
| 4554 | 172 answer.append(expanded); |
| 1354 | 173 } |
| 174 } | |
| 175 else | |
| 176 { | |
| 177 answer.append(*resource); | |
| 178 } | |
| 179 } | |
| 180 | |
| 181 output.AnswerJson(answer); | |
| 182 } | |
| 183 | |
| 184 | |
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185 template <enum ResourceType resourceType> |
| 974 | 186 static void ListResources(RestApiGetCall& call) |
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187 { |
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188 if (call.IsDocumentation()) |
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189 { |
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190 const std::string resources = GetResourceTypeText(resourceType, true /* plural */, false /* lower case */); |
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191 call.GetDocumentation() |
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192 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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193 .SetSummary("List the available " + resources) |
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194 .SetDescription("List the Orthanc identifiers of all the available DICOM " + resources) |
| 4403 | 195 .SetHttpGetArgument("limit", RestApiCallDocumentation::Type_Number, "Limit the number of results", false) |
| 196 .SetHttpGetArgument("since", RestApiCallDocumentation::Type_Number, "Show only the resources since the provided index", false) | |
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197 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, |
| 4403 | 198 "If present, retrieve detailed information about the individual " + resources, false) |
| 4404 | 199 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
| 200 "about the reported " + resources + " (if `expand` argument is provided)") | |
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201 .SetHttpGetSample("https://demo.orthanc-server.com/" + resources + "?since=0&limit=2", true); |
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202 return; |
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203 } |
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204 |
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205 ServerIndex& index = OrthancRestApi::GetIndex(call); |
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206 |
| 1354 | 207 std::list<std::string> result; |
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208 |
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209 if (call.HasArgument("limit") || |
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210 call.HasArgument("since")) |
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211 { |
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212 if (!call.HasArgument("limit")) |
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213 { |
| 2955 | 214 throw OrthancException(ErrorCode_BadRequest, |
| 215 "Missing \"limit\" argument for GET request against: " + | |
| 216 call.FlattenUri()); | |
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217 } |
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218 |
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219 if (!call.HasArgument("since")) |
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220 { |
| 2955 | 221 throw OrthancException(ErrorCode_BadRequest, |
| 222 "Missing \"since\" argument for GET request against: " + | |
| 223 call.FlattenUri()); | |
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224 } |
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225 |
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226 size_t since = boost::lexical_cast<size_t>(call.GetArgument("since", "")); |
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227 size_t limit = boost::lexical_cast<size_t>(call.GetArgument("limit", "")); |
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228 index.GetAllUuids(result, resourceType, since, limit); |
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229 } |
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230 else |
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231 { |
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232 index.GetAllUuids(result, resourceType); |
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233 } |
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234 |
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235 |
| 1354 | 236 AnswerListOfResources(call.GetOutput(), index, result, resourceType, call.HasArgument("expand")); |
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237 } |
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238 |
| 4409 | 239 |
| 240 | |
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241 template <enum ResourceType resourceType> |
| 974 | 242 static void GetSingleResource(RestApiGetCall& call) |
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243 { |
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244 if (call.IsDocumentation()) |
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245 { |
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246 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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247 call.GetDocumentation() |
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248 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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249 .SetSummary("Get information about some " + resource) |
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250 .SetDescription("Get detailed information about the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
| 4404 | 251 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 4409 | 252 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
| 253 .SetHttpGetSample(GetDocumentationSampleResource(resourceType), true); | |
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254 return; |
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255 } |
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256 |
| 4554 | 257 Json::Value json; |
| 258 if (OrthancRestApi::GetIndex(call).ExpandResource(json, call.GetUriComponent("id", ""), resourceType)) | |
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259 { |
| 4554 | 260 call.GetOutput().AnswerJson(json); |
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261 } |
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262 } |
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263 |
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264 template <enum ResourceType resourceType> |
| 974 | 265 static void DeleteSingleResource(RestApiDeleteCall& call) |
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266 { |
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267 if (call.IsDocumentation()) |
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268 { |
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269 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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270 call.GetDocumentation() |
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271 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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272 .SetSummary("Delete some " + resource) |
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273 .SetDescription("Delete the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
| 4404 | 274 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); |
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275 return; |
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276 } |
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277 |
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278 Json::Value result; |
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279 if (OrthancRestApi::GetContext(call).DeleteResource(result, call.GetUriComponent("id", ""), resourceType)) |
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280 { |
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281 call.GetOutput().AnswerJson(result); |
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282 } |
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283 } |
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284 |
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285 |
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286 // Get information about a single patient ----------------------------------- |
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287 |
| 974 | 288 static void IsProtectedPatient(RestApiGetCall& call) |
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289 { |
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290 if (call.IsDocumentation()) |
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291 { |
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292 call.GetDocumentation() |
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293 .SetTag("Patients") |
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294 .SetSummary("Is the patient protected against recycling?") |
| 4404 | 295 .SetUriArgument("id", "Orthanc identifier of the patient of interest") |
| 4403 | 296 .AddAnswerType(MimeType_PlainText, "`1` if protected, `0` if not protected"); |
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297 return; |
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298 } |
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299 |
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300 std::string publicId = call.GetUriComponent("id", ""); |
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301 bool isProtected = OrthancRestApi::GetIndex(call).IsProtectedPatient(publicId); |
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302 call.GetOutput().AnswerBuffer(isProtected ? "1" : "0", MimeType_PlainText); |
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303 } |
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304 |
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305 |
| 974 | 306 static void SetPatientProtection(RestApiPutCall& call) |
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307 { |
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308 if (call.IsDocumentation()) |
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309 { |
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310 call.GetDocumentation() |
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311 .SetTag("Patients") |
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312 .SetSummary("Protect one patient against recycling") |
| 4403 | 313 .SetDescription("Check out configuration options `MaximumStorageSize` and `MaximumPatientCount`") |
| 4404 | 314 .SetUriArgument("id", "Orthanc identifier of the patient of interest"); |
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315 return; |
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316 } |
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317 |
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318 ServerContext& context = OrthancRestApi::GetContext(call); |
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319 |
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320 std::string publicId = call.GetUriComponent("id", ""); |
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321 |
|
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322 context.GetIndex().SetProtectedPatient(publicId, call.ParseBooleanBody()); |
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323 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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324 } |
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325 |
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326 |
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327 // Get information about a single instance ---------------------------------- |
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328 |
| 974 | 329 static void GetInstanceFile(RestApiGetCall& call) |
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330 { |
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331 if (call.IsDocumentation()) |
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332 { |
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333 call.GetDocumentation() |
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334 .SetTag("Instances") |
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335 .SetSummary("Download DICOM") |
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336 .SetDescription("Download one DICOM instance") |
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337 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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338 .SetHttpHeader("Accept", "This HTTP header can be set to retrieve the DICOM instance in DICOMweb format") |
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339 .AddAnswerType(MimeType_Dicom, "The DICOM instance") |
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340 .AddAnswerType(MimeType_DicomWebJson, "The DICOM instance, in DICOMweb JSON format") |
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341 .AddAnswerType(MimeType_DicomWebXml, "The DICOM instance, in DICOMweb XML format"); |
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342 return; |
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343 } |
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344 |
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345 ServerContext& context = OrthancRestApi::GetContext(call); |
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346 |
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347 std::string publicId = call.GetUriComponent("id", ""); |
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348 |
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349 HttpToolbox::Arguments::const_iterator accept = call.GetHttpHeaders().find("accept"); |
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350 if (accept != call.GetHttpHeaders().end()) |
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351 { |
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352 // New in Orthanc 1.5.4 |
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353 try |
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354 { |
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355 MimeType mime = StringToMimeType(accept->second.c_str()); |
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356 |
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357 if (mime == MimeType_DicomWebJson || |
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358 mime == MimeType_DicomWebXml) |
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359 { |
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360 DicomWebJsonVisitor visitor; |
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361 |
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362 { |
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363 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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364 locker.GetDicom().Apply(visitor); |
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365 } |
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366 |
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367 if (mime == MimeType_DicomWebJson) |
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368 { |
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369 std::string s = visitor.GetResult().toStyledString(); |
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370 call.GetOutput().AnswerBuffer(s, MimeType_DicomWebJson); |
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371 } |
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372 else |
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373 { |
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374 std::string xml; |
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375 visitor.FormatXml(xml); |
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376 call.GetOutput().AnswerBuffer(xml, MimeType_DicomWebXml); |
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377 } |
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378 |
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379 return; |
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380 } |
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381 } |
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382 catch (OrthancException&) |
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383 { |
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384 } |
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385 } |
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386 |
|
1146
200fcac0deb4
optimization for access to attachments
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387 context.AnswerAttachment(call.GetOutput(), publicId, FileContentType_Dicom); |
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388 } |
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389 |
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390 |
| 974 | 391 static void ExportInstanceFile(RestApiPostCall& call) |
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392 { |
| 4421 | 393 if (call.IsDocumentation()) |
| 394 { | |
| 395 call.GetDocumentation() | |
| 396 .SetTag("Instances") | |
| 397 .SetSummary("Write DICOM onto filesystem") | |
| 398 .SetDescription("Write the DICOM file onto the filesystem where Orthanc is running") | |
| 399 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 400 .AddRequestType(MimeType_PlainText, "Target path on the filesystem"); | |
| 401 return; | |
| 402 } | |
| 403 | |
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404 ServerContext& context = OrthancRestApi::GetContext(call); |
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405 |
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406 std::string publicId = call.GetUriComponent("id", ""); |
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407 |
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408 std::string dicom; |
| 2124 | 409 context.ReadDicom(dicom, publicId); |
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410 |
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411 std::string target; |
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412 call.BodyToString(target); |
| 2140 | 413 SystemToolbox::WriteFile(dicom, target); |
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414 |
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415 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
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416 } |
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417 |
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418 |
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419 template <DicomToJsonFormat format> |
| 974 | 420 static void GetInstanceTags(RestApiGetCall& call) |
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421 { |
| 4404 | 422 if (call.IsDocumentation()) |
| 423 { | |
| 424 if (format == DicomToJsonFormat_Human) | |
| 425 { | |
| 426 call.GetDocumentation() | |
| 427 .SetTag("Instances") | |
| 428 .SetSummary("Get human-readable tags") | |
| 429 .SetDescription("Get the DICOM tags in human-readable format") | |
| 430 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
|
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431 .SetHttpGetArgument("ignore-length", RestApiCallDocumentation::Type_JsonListOfStrings, |
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432 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
| 4404 | 433 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") |
| 4415 | 434 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/simplified-tags", 10); |
| 4404 | 435 return; |
| 436 } | |
| 437 else | |
| 438 { | |
| 439 throw OrthancException(ErrorCode_NotImplemented); | |
| 440 } | |
| 441 } | |
| 442 | |
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443 ServerContext& context = OrthancRestApi::GetContext(call); |
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444 |
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445 std::string publicId = call.GetUriComponent("id", ""); |
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446 |
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447 std::set<DicomTag> ignoreTagLength; |
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448 ParseSetOfTags(ignoreTagLength, call, "ignore-length"); |
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449 |
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450 if (format != DicomToJsonFormat_Full || |
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451 !ignoreTagLength.empty()) |
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452 { |
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453 Json::Value full; |
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454 context.ReadDicomAsJson(full, publicId, ignoreTagLength); |
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455 AnswerDicomAsJson(call, full, format); |
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456 } |
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457 else |
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458 { |
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459 // This path allows one to avoid the JSON decoding if no |
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460 // simplification is asked, and if no "ignore-length" argument |
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461 // is present |
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462 Json::Value full; |
| 2127 | 463 context.ReadDicomAsJson(full, publicId); |
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464 call.GetOutput().AnswerJson(full); |
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465 } |
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466 } |
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467 |
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468 |
| 974 | 469 static void GetInstanceTagsBis(RestApiGetCall& call) |
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470 { |
| 4404 | 471 if (call.IsDocumentation()) |
| 472 { | |
| 473 call.GetDocumentation() | |
| 474 .SetTag("Instances") | |
| 475 .SetSummary("Get DICOM tags") | |
| 476 .SetDescription("Get the DICOM tags in the specified format. By default, the `full` format is used, which " | |
| 477 "combines hexadecimal tags with human-readable description.") | |
| 478 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 479 .SetHttpGetArgument("simplify", RestApiCallDocumentation::Type_String, | |
| 480 "If present, report the DICOM tags in human-readable format " | |
| 481 "(same as the `/instances/{id}/simplified-tags` route)", false) | |
| 482 .SetHttpGetArgument("short", RestApiCallDocumentation::Type_String, | |
| 483 "If present, report the DICOM tags indexed in hexadecimal format", false) | |
| 484 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") | |
| 4415 | 485 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/tags", 10); |
| 4404 | 486 return; |
| 487 } | |
| 488 | |
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489 switch (GetDicomFormat(call)) |
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490 { |
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491 case DicomToJsonFormat_Human: |
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492 GetInstanceTags<DicomToJsonFormat_Human>(call); |
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493 break; |
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494 |
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495 case DicomToJsonFormat_Short: |
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496 GetInstanceTags<DicomToJsonFormat_Short>(call); |
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497 break; |
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498 |
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499 case DicomToJsonFormat_Full: |
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500 GetInstanceTags<DicomToJsonFormat_Full>(call); |
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501 break; |
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502 |
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503 default: |
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504 throw OrthancException(ErrorCode_InternalError); |
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505 } |
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506 } |
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507 |
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508 |
| 974 | 509 static void ListFrames(RestApiGetCall& call) |
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510 { |
| 4414 | 511 if (call.IsDocumentation()) |
| 512 { | |
| 513 call.GetDocumentation() | |
| 514 .SetTag("Instances") | |
| 515 .SetSummary("List available frames") | |
| 516 .SetDescription("List the frames that are available in the DICOM instance of interest") | |
| 517 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 518 .AddAnswerType(MimeType_Json, "The list of the indices of the available frames") | |
| 519 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/frames", true); | |
| 520 return; | |
| 521 } | |
| 522 | |
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523 std::string publicId = call.GetUriComponent("id", ""); |
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524 |
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525 unsigned int numberOfFrames; |
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526 |
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527 { |
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528 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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529 numberOfFrames = locker.GetDicom().GetFramesCount(); |
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530 } |
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531 |
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532 Json::Value result = Json::arrayValue; |
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533 for (unsigned int i = 0; i < numberOfFrames; i++) |
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534 { |
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535 result.append(i); |
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536 } |
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537 |
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538 call.GetOutput().AnswerJson(result); |
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539 } |
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540 |
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541 |
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542 namespace |
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543 { |
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544 class ImageToEncode |
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545 { |
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546 private: |
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547 std::unique_ptr<ImageAccessor>& image_; |
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548 ImageExtractionMode mode_; |
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549 bool invert_; |
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550 MimeType format_; |
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551 std::string answer_; |
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552 |
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553 public: |
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554 ImageToEncode(std::unique_ptr<ImageAccessor>& image, |
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555 ImageExtractionMode mode, |
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556 bool invert) : |
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557 image_(image), |
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558 mode_(mode), |
| 4205 | 559 invert_(invert), |
| 560 format_(MimeType_Binary) | |
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561 { |
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562 } |
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563 |
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564 void Answer(RestApiOutput& output) |
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565 { |
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566 output.AnswerBuffer(answer_, format_); |
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567 } |
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568 |
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569 void EncodeUsingPng() |
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570 { |
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571 format_ = MimeType_Png; |
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572 DicomImageDecoder::ExtractPngImage(answer_, image_, mode_, invert_); |
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573 } |
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574 |
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575 void EncodeUsingPam() |
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576 { |
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577 format_ = MimeType_Pam; |
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578 DicomImageDecoder::ExtractPamImage(answer_, image_, mode_, invert_); |
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579 } |
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580 |
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581 void EncodeUsingJpeg(uint8_t quality) |
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582 { |
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583 format_ = MimeType_Jpeg; |
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584 DicomImageDecoder::ExtractJpegImage(answer_, image_, mode_, invert_, quality); |
|
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585 } |
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586 }; |
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587 |
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588 class EncodePng : public HttpContentNegociation::IHandler |
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589 { |
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590 private: |
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591 ImageToEncode& image_; |
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592 |
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593 public: |
| 4205 | 594 explicit EncodePng(ImageToEncode& image) : image_(image) |
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595 { |
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596 } |
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597 |
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598 virtual void Handle(const std::string& type, |
| 4205 | 599 const std::string& subtype) ORTHANC_OVERRIDE |
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600 { |
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601 assert(type == "image"); |
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602 assert(subtype == "png"); |
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603 image_.EncodeUsingPng(); |
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604 } |
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605 }; |
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606 |
|
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607 class EncodePam : public HttpContentNegociation::IHandler |
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608 { |
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609 private: |
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610 ImageToEncode& image_; |
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611 |
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612 public: |
| 4205 | 613 explicit EncodePam(ImageToEncode& image) : image_(image) |
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614 { |
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615 } |
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616 |
|
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617 virtual void Handle(const std::string& type, |
| 4205 | 618 const std::string& subtype) ORTHANC_OVERRIDE |
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619 { |
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620 assert(type == "image"); |
| 2780 | 621 assert(subtype == "x-portable-arbitrarymap"); |
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622 image_.EncodeUsingPam(); |
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623 } |
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624 }; |
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625 |
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626 class EncodeJpeg : public HttpContentNegociation::IHandler |
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627 { |
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628 private: |
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629 ImageToEncode& image_; |
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630 unsigned int quality_; |
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631 |
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632 public: |
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633 EncodeJpeg(ImageToEncode& image, |
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634 const RestApiGetCall& call) : |
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635 image_(image) |
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636 { |
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637 std::string v = call.GetArgument("quality", "90" /* default JPEG quality */); |
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638 bool ok = false; |
|
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639 |
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640 try |
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641 { |
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642 quality_ = boost::lexical_cast<unsigned int>(v); |
| 1847 | 643 ok = (quality_ >= 1 && quality_ <= 100); |
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644 } |
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645 catch (boost::bad_lexical_cast&) |
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646 { |
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647 } |
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648 |
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649 if (!ok) |
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650 { |
| 2955 | 651 throw OrthancException( |
| 652 ErrorCode_BadRequest, | |
| 653 "Bad quality for a JPEG encoding (must be a number between 0 and 100): " + v); | |
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654 } |
|
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|
655 } |
|
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diff
changeset
|
656 |
|
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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diff
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|
657 virtual void Handle(const std::string& type, |
| 4205 | 658 const std::string& subtype) ORTHANC_OVERRIDE |
|
1784
2dbf25006f88
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diff
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|
659 { |
|
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|
660 assert(type == "image"); |
|
2dbf25006f88
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|
661 assert(subtype == "jpeg"); |
|
1902
8b0ee8d5e6d0
Refactoring leading to speedups with custom image decoders
Sebastien Jodogne <s.jodogne@gmail.com>
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1900
diff
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|
662 image_.EncodeUsingJpeg(quality_); |
|
1784
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diff
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|
663 } |
|
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
664 }; |
|
1781
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1773
diff
changeset
|
665 } |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
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1773
diff
changeset
|
666 |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
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diff
changeset
|
667 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
668 namespace |
|
3600
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
669 { |
|
3683
12253ddefe5a
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diff
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|
670 class IDecodedFrameHandler : public boost::noncopyable |
|
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diff
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|
671 { |
|
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changeset
|
672 public: |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
673 virtual ~IDecodedFrameHandler() |
|
12253ddefe5a
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diff
changeset
|
674 { |
|
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diff
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|
675 } |
|
12253ddefe5a
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diff
changeset
|
676 |
|
12253ddefe5a
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Sebastien Jodogne <s.jodogne@gmail.com>
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3640
diff
changeset
|
677 virtual void Handle(RestApiGetCall& call, |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
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3690
diff
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|
678 std::unique_ptr<ImageAccessor>& decoded, |
|
3683
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skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
679 const DicomMap& dicom) = 0; |
|
12253ddefe5a
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
680 |
|
12253ddefe5a
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diff
changeset
|
681 virtual bool RequiresDicomTags() const = 0; |
|
12253ddefe5a
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diff
changeset
|
682 |
|
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3640
diff
changeset
|
683 static void Apply(RestApiGetCall& call, |
|
4406
4cb9f66a1c7c
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|
684 IDecodedFrameHandler& handler, |
|
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|
685 ImageExtractionMode mode /* for generation of documentation */, |
|
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|
686 bool isRendered /* for generation of documentation */) |
|
3683
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diff
changeset
|
687 { |
|
4406
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|
688 if (call.IsDocumentation()) |
|
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|
689 { |
|
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diff
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|
690 std::string m; |
|
4cb9f66a1c7c
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diff
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|
691 if (!isRendered) |
|
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diff
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|
692 { |
|
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diff
changeset
|
693 switch (mode) |
|
4cb9f66a1c7c
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diff
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|
694 { |
|
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diff
changeset
|
695 case ImageExtractionMode_Preview: |
|
4cb9f66a1c7c
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diff
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|
696 m = "preview"; |
|
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|
697 break; |
|
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diff
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|
698 case ImageExtractionMode_UInt8: |
|
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|
699 m = "uint8"; |
|
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diff
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|
700 break; |
|
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diff
changeset
|
701 case ImageExtractionMode_UInt16: |
|
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diff
changeset
|
702 m = "uint16"; |
|
4cb9f66a1c7c
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diff
changeset
|
703 break; |
|
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
704 case ImageExtractionMode_Int16: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
705 m = "int16"; |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
706 break; |
|
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
707 default: |
|
4cb9f66a1c7c
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parents:
4405
diff
changeset
|
708 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
4cb9f66a1c7c
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4405
diff
changeset
|
709 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
710 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
711 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
712 std::string description; |
|
4cb9f66a1c7c
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parents:
4405
diff
changeset
|
713 std::string verb = (isRendered ? "Render" : "Decode"); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
714 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
715 if (call.HasUriComponent("frame")) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
716 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
717 description = verb + " one frame of interest from the given DICOM instance."; |
|
4cb9f66a1c7c
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parents:
4405
diff
changeset
|
718 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
719 .SetSummary(verb + " a frame" + (m.empty() ? "" : " (" + m + ")")) |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
720 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
721 } |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
722 else |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
723 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
724 description = verb + " the first frame of the given DICOM instance."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
725 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
726 .SetSummary(verb + " an image" + (m.empty() ? "" : " (" + m + ")")); |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
727 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
728 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
729 if (isRendered) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
730 { |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
731 description += (" This function takes scaling into account (`RescaleSlope` and `RescaleIntercept` tags), " |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
732 "as well as the default windowing stored in the DICOM file (`WindowCenter` and `WindowWidth`tags), " |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
733 "and can be used to resize the resulting image. Color images are not affected by windowing."); |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
734 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
735 .SetHttpGetArgument("window-center",RestApiCallDocumentation::Type_Number, "Windowing center", false) |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
736 .SetHttpGetArgument("window-width",RestApiCallDocumentation::Type_Number, "Windowing width", false) |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
737 .SetHttpGetArgument("width",RestApiCallDocumentation::Type_Number, "Width of the resized image", false) |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
738 .SetHttpGetArgument("height",RestApiCallDocumentation::Type_Number, "Height of the resized image", false) |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
739 .SetHttpGetArgument("smooth",RestApiCallDocumentation::Type_Boolean, "Whether to smooth image on resize", false); |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
740 } |
|
4cb9f66a1c7c
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4405
diff
changeset
|
741 else |
|
4cb9f66a1c7c
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diff
changeset
|
742 { |
|
4cb9f66a1c7c
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parents:
4405
diff
changeset
|
743 switch (mode) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
744 { |
|
4cb9f66a1c7c
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parents:
4405
diff
changeset
|
745 case ImageExtractionMode_Preview: |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
746 description += " The full dynamic range of grayscale images is rescaled to the [0,255] range."; |
|
4cb9f66a1c7c
documenting generation of images
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diff
changeset
|
747 break; |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
748 case ImageExtractionMode_UInt8: |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
749 description += " Pixels of grayscale images are truncated to the [0,255] range."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
750 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
751 case ImageExtractionMode_UInt16: |
|
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
752 description += " Pixels of grayscale images are truncated to the [0,65535] range."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
753 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
754 case ImageExtractionMode_Int16: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
755 description += (" Pixels of grayscale images are truncated to the [-32768,32767] range. " |
|
4cb9f66a1c7c
documenting generation of images
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diff
changeset
|
756 "Negative values must be interpreted according to two's complement."); |
|
4cb9f66a1c7c
documenting generation of images
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diff
changeset
|
757 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
758 default: |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
759 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
760 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
761 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
762 |
|
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diff
changeset
|
763 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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changeset
|
764 .SetTag("Instances") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
765 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
|
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documenting generation of images
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parents:
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diff
changeset
|
766 .SetHttpGetArgument("quality", RestApiCallDocumentation::Type_Number, "Quality for JPEG images (between 1 and 100, defaults to 90)", false) |
|
4cb9f66a1c7c
documenting generation of images
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diff
changeset
|
767 .SetHttpHeader("Accept", "Format of the resulting image. Can be `image/png` (default), `image/jpeg` or `image/x-portable-arbitrarymap`") |
|
4cb9f66a1c7c
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diff
changeset
|
768 .AddAnswerType(MimeType_Png, "PNG image") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
769 .AddAnswerType(MimeType_Jpeg, "JPEG image") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
770 .AddAnswerType(MimeType_Pam, "PAM image (Portable Arbitrary Map)") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
771 .SetDescription(description); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
772 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
773 return; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
774 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
775 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
776 ServerContext& context = OrthancRestApi::GetContext(call); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
777 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
778 std::string frameId = call.GetUriComponent("frame", "0"); |
|
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skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
779 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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changeset
|
780 unsigned int frame; |
|
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skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
781 try |
|
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skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
782 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
783 frame = boost::lexical_cast<unsigned int>(frameId); |
|
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skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
784 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
785 catch (boost::bad_lexical_cast&) |
|
12253ddefe5a
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
786 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
787 return; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
788 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
789 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
790 DicomMap dicom; |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
791 std::unique_ptr<ImageAccessor> decoded; |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
792 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
793 try |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
794 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
795 std::string publicId = call.GetUriComponent("id", ""); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
796 |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
797 decoded.reset(context.DecodeDicomFrame(publicId, frame)); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
798 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
799 if (decoded.get() == NULL) |
|
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skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
800 { |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
801 throw OrthancException(ErrorCode_NotImplemented, |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
802 "Cannot decode DICOM instance with ID: " + publicId); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
803 } |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
804 |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
805 if (handler.RequiresDicomTags()) |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
806 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
807 /** |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
808 * Retrieve a summary of the DICOM tags, which is |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
809 * necessary to deal with MONOCHROME1 photometric |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
810 * interpretation, and with windowing parameters. |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
811 **/ |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
812 ServerContext::DicomCacheLocker locker(context, publicId); |
|
4140
0ddc5297a8ab
centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4139
diff
changeset
|
813 OrthancConfiguration::DefaultExtractDicomSummary(dicom, locker.GetDicom()); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
814 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
815 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
816 catch (OrthancException& e) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
817 { |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
818 if (e.GetErrorCode() == ErrorCode_ParameterOutOfRange || |
|
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skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
819 e.GetErrorCode() == ErrorCode_UnknownResource) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
820 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
821 // The frame number is out of the range for this DICOM |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
822 // instance, the resource is not existent |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
823 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
824 else |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
825 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
826 std::string root = ""; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
827 for (size_t i = 1; i < call.GetFullUri().size(); i++) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
828 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
829 root += "../"; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
830 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
831 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
832 call.GetOutput().Redirect(root + "app/images/unsupported.png"); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
833 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
3640
diff
changeset
|
834 return; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
835 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
836 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
837 handler.Handle(call, decoded, dicom); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
838 } |
|
3685
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
839 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
840 |
|
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
841 static void DefaultHandler(RestApiGetCall& call, |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
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parents:
3690
diff
changeset
|
842 std::unique_ptr<ImageAccessor>& decoded, |
|
3685
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
843 ImageExtractionMode mode, |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
844 bool invert) |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
845 { |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
846 ImageToEncode image(decoded, mode, invert); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
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3683
diff
changeset
|
847 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
848 HttpContentNegociation negociation; |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
849 EncodePng png(image); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
850 negociation.Register(MIME_PNG, png); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
851 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
852 EncodeJpeg jpeg(image, call); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
853 negociation.Register(MIME_JPEG, jpeg); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
854 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
855 EncodePam pam(image); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
856 negociation.Register(MIME_PAM, pam); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
857 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
858 if (negociation.Apply(call.GetHttpHeaders())) |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
859 { |
|
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
860 image.Answer(call.GetOutput()); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
861 } |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
862 } |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
863 }; |
|
3600
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
864 |
|
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
865 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
866 class GetImageHandler : public IDecodedFrameHandler |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
867 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
868 private: |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
869 ImageExtractionMode mode_; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
870 |
|
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871 public: |
| 4205 | 872 explicit GetImageHandler(ImageExtractionMode mode) : |
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873 mode_(mode) |
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874 { |
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875 } |
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876 |
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877 virtual void Handle(RestApiGetCall& call, |
|
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878 std::unique_ptr<ImageAccessor>& decoded, |
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879 const DicomMap& dicom) ORTHANC_OVERRIDE |
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880 { |
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881 bool invert = false; |
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882 |
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883 if (mode_ == ImageExtractionMode_Preview) |
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884 { |
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885 DicomImageInformation info(dicom); |
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886 invert = (info.GetPhotometricInterpretation() == PhotometricInterpretation_Monochrome1); |
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887 } |
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888 |
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889 DefaultHandler(call, decoded, mode_, invert); |
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890 } |
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891 |
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892 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
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893 { |
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894 return mode_ == ImageExtractionMode_Preview; |
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895 } |
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896 }; |
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897 |
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898 |
|
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899 class RenderedFrameHandler : public IDecodedFrameHandler |
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900 { |
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901 private: |
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902 static void GetDicomParameters(bool& invert, |
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903 float& rescaleSlope, |
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904 float& rescaleIntercept, |
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905 float& windowWidth, |
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906 float& windowCenter, |
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907 const DicomMap& dicom) |
|
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908 { |
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909 DicomImageInformation info(dicom); |
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910 |
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911 invert = (info.GetPhotometricInterpretation() == PhotometricInterpretation_Monochrome1); |
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912 |
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|
913 rescaleSlope = 1.0f; |
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914 rescaleIntercept = 0.0f; |
|
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915 |
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916 if (dicom.HasTag(Orthanc::DICOM_TAG_RESCALE_SLOPE) && |
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917 dicom.HasTag(Orthanc::DICOM_TAG_RESCALE_INTERCEPT)) |
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918 { |
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919 dicom.ParseFloat(rescaleSlope, Orthanc::DICOM_TAG_RESCALE_SLOPE); |
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920 dicom.ParseFloat(rescaleIntercept, Orthanc::DICOM_TAG_RESCALE_INTERCEPT); |
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921 } |
|
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|
922 |
|
3816
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923 windowWidth = static_cast<float>(1 << info.GetBitsStored()) * rescaleSlope; |
|
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924 windowCenter = windowWidth / 2.0f + rescaleIntercept; |
|
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|
925 |
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|
926 if (dicom.HasTag(Orthanc::DICOM_TAG_WINDOW_CENTER) && |
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927 dicom.HasTag(Orthanc::DICOM_TAG_WINDOW_WIDTH)) |
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928 { |
|
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|
929 dicom.ParseFirstFloat(windowCenter, Orthanc::DICOM_TAG_WINDOW_CENTER); |
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930 dicom.ParseFirstFloat(windowWidth, Orthanc::DICOM_TAG_WINDOW_WIDTH); |
|
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931 } |
|
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|
932 } |
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|
933 |
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|
934 static void GetUserArguments(float& windowWidth /* inout */, |
|
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|
935 float& windowCenter /* inout */, |
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|
936 unsigned int& argWidth, |
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|
937 unsigned int& argHeight, |
|
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|
938 bool& smooth, |
| 4205 | 939 const RestApiGetCall& call) |
|
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|
940 { |
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|
941 static const char* ARG_WINDOW_CENTER = "window-center"; |
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|
942 static const char* ARG_WINDOW_WIDTH = "window-width"; |
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|
943 static const char* ARG_WIDTH = "width"; |
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|
944 static const char* ARG_HEIGHT = "height"; |
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|
945 static const char* ARG_SMOOTH = "smooth"; |
|
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|
946 |
|
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947 if (call.HasArgument(ARG_WINDOW_WIDTH)) |
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|
948 { |
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|
949 try |
|
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|
950 { |
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|
951 windowWidth = boost::lexical_cast<float>(call.GetArgument(ARG_WINDOW_WIDTH, "")); |
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952 } |
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953 catch (boost::bad_lexical_cast&) |
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954 { |
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955 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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|
956 "Bad value for argument: " + std::string(ARG_WINDOW_WIDTH)); |
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957 } |
|
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|
958 } |
|
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|
959 |
|
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|
960 if (call.HasArgument(ARG_WINDOW_CENTER)) |
|
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|
961 { |
|
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|
962 try |
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|
963 { |
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964 windowCenter = boost::lexical_cast<float>(call.GetArgument(ARG_WINDOW_CENTER, "")); |
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|
965 } |
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|
966 catch (boost::bad_lexical_cast&) |
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|
967 { |
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|
968 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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|
969 "Bad value for argument: " + std::string(ARG_WINDOW_CENTER)); |
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|
970 } |
|
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|
971 } |
|
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changeset
|
972 |
|
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|
973 argWidth = 0; |
|
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|
974 argHeight = 0; |
|
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|
975 |
|
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|
976 if (call.HasArgument(ARG_WIDTH)) |
|
3685
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rendering of RGB24
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diff
changeset
|
977 { |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
978 try |
|
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
979 { |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
980 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_WIDTH, "")); |
|
3685
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rendering of RGB24
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parents:
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diff
changeset
|
981 if (tmp < 0) |
|
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
982 { |
|
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
983 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
984 "Argument cannot be negative: " + std::string(ARG_WIDTH)); |
|
3685
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
985 } |
|
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
986 else |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
987 { |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
988 argWidth = static_cast<unsigned int>(tmp); |
|
3685
2cc34837d694
rendering of RGB24
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diff
changeset
|
989 } |
|
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
990 } |
|
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
991 catch (boost::bad_lexical_cast&) |
|
2cc34837d694
rendering of RGB24
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diff
changeset
|
992 { |
|
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
993 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
994 "Bad value for argument: " + std::string(ARG_WIDTH)); |
|
3685
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
995 } |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
996 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
997 |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
998 if (call.HasArgument(ARG_HEIGHT)) |
|
3685
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rendering of RGB24
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parents:
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diff
changeset
|
999 { |
|
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1000 try |
|
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1001 { |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
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parents:
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changeset
|
1002 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_HEIGHT, "")); |
|
3685
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rendering of RGB24
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diff
changeset
|
1003 if (tmp < 0) |
|
2cc34837d694
rendering of RGB24
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diff
changeset
|
1004 { |
|
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1005 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
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parents:
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diff
changeset
|
1006 "Argument cannot be negative: " + std::string(ARG_HEIGHT)); |
|
3685
2cc34837d694
rendering of RGB24
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diff
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|
1007 } |
|
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1008 else |
|
2cc34837d694
rendering of RGB24
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diff
changeset
|
1009 { |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
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changeset
|
1010 argHeight = static_cast<unsigned int>(tmp); |
|
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1011 } |
|
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rendering of RGB24
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|
1012 } |
|
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rendering of RGB24
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|
1013 catch (boost::bad_lexical_cast&) |
|
2cc34837d694
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|
1014 { |
|
2cc34837d694
rendering of RGB24
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changeset
|
1015 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
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parents:
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diff
changeset
|
1016 "Bad value for argument: " + std::string(ARG_HEIGHT)); |
|
3685
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changeset
|
1017 } |
|
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rendering of RGB24
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diff
changeset
|
1018 } |
|
2cc34837d694
rendering of RGB24
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diff
changeset
|
1019 |
|
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parents:
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changeset
|
1020 smooth = false; |
|
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diff
changeset
|
1021 |
|
2cc34837d694
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changeset
|
1022 if (call.HasArgument(ARG_SMOOTH)) |
|
2cc34837d694
rendering of RGB24
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diff
changeset
|
1023 { |
|
4473
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4460
diff
changeset
|
1024 smooth = RestApiCall::ParseBoolean(call.GetArgument(ARG_SMOOTH, "")); |
|
3685
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rendering of RGB24
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|
1025 } |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
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changeset
|
1026 } |
|
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
1027 |
|
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
1028 |
|
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implementation of "/instances/.../rendered" for grayscale images
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changeset
|
1029 public: |
|
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implementation of "/instances/.../rendered" for grayscale images
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parents:
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diff
changeset
|
1030 virtual void Handle(RestApiGetCall& call, |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
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diff
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|
1031 std::unique_ptr<ImageAccessor>& decoded, |
|
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|
1032 const DicomMap& dicom) ORTHANC_OVERRIDE |
|
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implementation of "/instances/.../rendered" for grayscale images
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|
1033 { |
|
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implementation of "/instances/.../rendered" for grayscale images
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changeset
|
1034 bool invert; |
|
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
1035 float rescaleSlope, rescaleIntercept, windowWidth, windowCenter; |
|
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
1036 GetDicomParameters(invert, rescaleSlope, rescaleIntercept, windowWidth, windowCenter, dicom); |
| 3686 | 1037 |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
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changeset
|
1038 unsigned int argWidth, argHeight; |
|
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
1039 bool smooth; |
|
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implementation of "/instances/.../rendered" for grayscale images
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parents:
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diff
changeset
|
1040 GetUserArguments(windowWidth, windowCenter, argWidth, argHeight, smooth, call); |
|
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
1041 |
|
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
1042 unsigned int targetWidth = decoded->GetWidth(); |
|
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
1043 unsigned int targetHeight = decoded->GetHeight(); |
| 3686 | 1044 |
| 1045 if (decoded->GetWidth() != 0 && | |
| 1046 decoded->GetHeight() != 0) | |
| 1047 { | |
| 1048 float ratio = 1; | |
| 1049 | |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
1050 if (argWidth != 0 && |
|
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1051 argHeight != 0) |
| 3686 | 1052 { |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
1053 float ratioX = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
1054 float ratioY = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1055 ratio = std::min(ratioX, ratioY); |
| 3686 | 1056 } |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1057 else if (argWidth != 0) |
| 3686 | 1058 { |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1059 ratio = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
| 3686 | 1060 } |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1061 else if (argHeight != 0) |
|
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1062 { |
|
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1063 ratio = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
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parents:
3687
diff
changeset
|
1064 } |
|
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1065 |
|
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1066 targetWidth = boost::math::iround(ratio * static_cast<float>(decoded->GetWidth())); |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1067 targetHeight = boost::math::iround(ratio * static_cast<float>(decoded->GetHeight())); |
| 3686 | 1068 } |
| 1069 | |
|
3685
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rendering of RGB24
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diff
changeset
|
1070 if (decoded->GetFormat() == PixelFormat_RGB24) |
|
2cc34837d694
rendering of RGB24
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diff
changeset
|
1071 { |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
1072 if (targetWidth == decoded->GetWidth() && |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1073 targetHeight == decoded->GetHeight()) |
|
3685
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rendering of RGB24
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3683
diff
changeset
|
1074 { |
|
2cc34837d694
rendering of RGB24
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diff
changeset
|
1075 DefaultHandler(call, decoded, ImageExtractionMode_Preview, false); |
|
2cc34837d694
rendering of RGB24
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diff
changeset
|
1076 } |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1077 else |
|
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
1078 { |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
1079 std::unique_ptr<ImageAccessor> resized( |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
1080 new Image(decoded->GetFormat(), targetWidth, targetHeight, false)); |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
1081 |
|
3685
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1082 if (smooth && |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1083 (targetWidth < decoded->GetWidth() || |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1084 targetHeight < decoded->GetHeight())) |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1085 { |
|
4065
d6362b2c4b61
export dcmdata in shared library, rounding in convolution tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4055
diff
changeset
|
1086 ImageProcessing::SmoothGaussian5x5(*decoded, false /* be fast, don't round */); |
|
3685
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1087 } |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1088 |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1089 ImageProcessing::Resize(*resized, *decoded); |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1090 DefaultHandler(call, resized, ImageExtractionMode_Preview, false); |
|
3685
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rendering of RGB24
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|
1091 } |
|
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|
1092 } |
| 3686 | 1093 else |
| 1094 { | |
|
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|
1095 // Grayscale image: (1) convert to Float32, (2) apply |
|
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1096 // windowing to get a Grayscale8, (3) possibly resize |
|
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1097 |
|
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|
1098 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
|
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1099 ImageProcessing::Convert(converted, *decoded); |
|
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1100 |
|
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1101 // Avoid divisions by zero |
|
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1102 if (windowWidth <= 1.0f) |
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1103 { |
|
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1104 windowWidth = 1; |
|
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1105 } |
|
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1106 |
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1107 if (std::abs(rescaleSlope) <= 0.1f) |
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1108 { |
|
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1109 rescaleSlope = 0.1f; |
|
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1110 } |
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1111 |
|
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1112 const float scaling = 255.0f * rescaleSlope / windowWidth; |
|
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1113 const float offset = (rescaleIntercept - windowCenter + windowWidth / 2.0f) / rescaleSlope; |
|
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1114 |
|
3712
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1115 std::unique_ptr<ImageAccessor> rescaled(new Image(PixelFormat_Grayscale8, decoded->GetWidth(), decoded->GetHeight(), false)); |
|
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|
1116 ImageProcessing::ShiftScale(*rescaled, converted, offset, scaling, false); |
|
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1117 |
|
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1118 if (targetWidth == decoded->GetWidth() && |
|
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1119 targetHeight == decoded->GetHeight()) |
|
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1120 { |
|
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1121 DefaultHandler(call, rescaled, ImageExtractionMode_UInt8, invert); |
|
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1122 } |
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1123 else |
|
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1124 { |
|
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|
1125 std::unique_ptr<ImageAccessor> resized( |
|
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1126 new Image(PixelFormat_Grayscale8, targetWidth, targetHeight, false)); |
|
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1127 |
|
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|
1128 if (smooth && |
|
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|
1129 (targetWidth < decoded->GetWidth() || |
|
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|
1130 targetHeight < decoded->GetHeight())) |
|
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|
1131 { |
|
4065
d6362b2c4b61
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|
1132 ImageProcessing::SmoothGaussian5x5(*rescaled, false /* be fast, don't round */); |
|
3690
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|
1133 } |
|
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|
1134 |
|
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|
1135 ImageProcessing::Resize(*resized, *rescaled); |
|
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|
1136 DefaultHandler(call, resized, ImageExtractionMode_UInt8, invert); |
|
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|
1137 } |
| 3686 | 1138 } |
|
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1139 } |
|
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1140 |
|
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1141 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
|
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1142 { |
|
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1143 return true; |
|
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1144 } |
|
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|
1145 }; |
|
3600
4066998150ef
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Alain Mazy <alain@mazy.be>
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|
1146 } |
|
4066998150ef
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|
1147 |
|
3683
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|
1148 |
|
751
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|
1149 template <enum ImageExtractionMode mode> |
| 974 | 1150 static void GetImage(RestApiGetCall& call) |
|
751
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|
1151 { |
|
3926
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|
1152 Semaphore::Locker locker(throttlingSemaphore_); |
|
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|
1153 |
|
3683
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|
1154 GetImageHandler handler(mode); |
|
4406
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|
1155 IDecodedFrameHandler::Apply(call, handler, mode, false /* not rendered */); |
|
3683
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|
1156 } |
|
1906
d7c1cb559431
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1157 |
|
1826
ac5b0b4e2434
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1158 |
|
3683
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|
1159 static void GetRenderedFrame(RestApiGetCall& call) |
|
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|
1160 { |
|
3926
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|
1161 Semaphore::Locker locker(throttlingSemaphore_); |
|
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|
1162 |
|
3683
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changeset
|
1163 RenderedFrameHandler handler; |
|
4406
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|
1164 IDecodedFrameHandler::Apply(call, handler, ImageExtractionMode_Preview /* arbitrary value */, true); |
|
751
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|
1165 } |
|
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|
1166 |
|
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|
1167 |
| 974 | 1168 static void GetMatlabImage(RestApiGetCall& call) |
|
874
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|
1169 { |
| 4414 | 1170 if (call.IsDocumentation()) |
| 1171 { | |
| 1172 std::string description; | |
| 1173 | |
| 1174 if (call.HasUriComponent("frame")) | |
| 1175 { | |
| 1176 description = "Decode one frame of interest from the given DICOM instance"; | |
| 1177 call.GetDocumentation() | |
| 1178 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); | |
| 1179 } | |
| 1180 else | |
| 1181 { | |
| 1182 description = "Decode the first frame of the given DICOM instance."; | |
| 1183 } | |
| 1184 | |
| 1185 call.GetDocumentation() | |
| 1186 .SetTag("Instances") | |
| 1187 .SetSummary("Decode frame for Matlab") | |
| 1188 .SetDescription(description + ", and export this frame as a Octave/Matlab matrix to be imported with `eval()`: " | |
| 1189 "https://book.orthanc-server.com/faq/matlab.html") | |
| 1190 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 1191 .AddAnswerType(MimeType_PlainText, "Octave/Matlab matrix"); | |
| 1192 return; | |
| 1193 } | |
| 1194 | |
|
3926
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|
1195 Semaphore::Locker locker(throttlingSemaphore_); |
|
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|
1196 |
|
874
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|
1197 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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1198 |
|
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|
1199 std::string frameId = call.GetUriComponent("frame", "0"); |
|
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|
1200 |
|
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|
1201 unsigned int frame; |
|
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|
1202 try |
|
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|
1203 { |
|
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|
1204 frame = boost::lexical_cast<unsigned int>(frameId); |
|
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|
1205 } |
|
2836
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|
1206 catch (boost::bad_lexical_cast&) |
|
874
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|
1207 { |
|
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|
1208 return; |
|
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|
1209 } |
|
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|
1210 |
|
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|
1211 std::string publicId = call.GetUriComponent("id", ""); |
|
3928
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ServerContext::DecodeDicomFrame()
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|
1212 std::unique_ptr<ImageAccessor> decoded(context.DecodeDicomFrame(publicId, frame)); |
|
874
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1213 |
|
3928
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ServerContext::DecodeDicomFrame()
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|
1214 if (decoded.get() == NULL) |
|
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ServerContext::DecodeDicomFrame()
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|
1215 { |
|
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|
1216 throw OrthancException(ErrorCode_NotImplemented, |
|
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|
1217 "Cannot decode DICOM instance with ID: " + publicId); |
|
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1218 } |
|
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1219 else |
|
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ServerContext::DecodeDicomFrame()
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1220 { |
|
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ServerContext::DecodeDicomFrame()
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1221 std::string result; |
|
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1222 decoded->ToMatlabString(result); |
|
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ServerContext::DecodeDicomFrame()
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1223 call.GetOutput().AnswerBuffer(result, MimeType_PlainText); |
|
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1224 } |
|
874
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1225 } |
|
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1226 |
|
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1227 |
|
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|
1228 template <bool GzipCompression> |
|
1924
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1229 static void GetRawFrame(RestApiGetCall& call) |
|
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|
1230 { |
| 4408 | 1231 if (call.IsDocumentation()) |
| 1232 { | |
| 1233 call.GetDocumentation() | |
| 1234 .SetTag("Instances") | |
| 1235 .SetSummary("Access raw frame" + std::string(GzipCompression ? " (compressed)" : "")) | |
| 1236 .SetDescription("Access the raw content of one individual frame of the DICOM instance of interest, " | |
| 1237 "bypassing image decoding. This is notably useful to access the source files " | |
| 1238 "in compressed transfer syntaxes." + | |
| 1239 std::string(GzipCompression ? " The image is compressed using gzip" : "")) | |
|
4424
83371ccdfe80
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1240 .SetUriArgument("id", "Orthanc identifier of the instance of interest") |
| 4408 | 1241 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
| 1242 | |
| 1243 if (GzipCompression) | |
| 1244 { | |
| 1245 call.GetDocumentation().AddAnswerType(MimeType_Gzip, "The raw frame, compressed using gzip"); | |
| 1246 } | |
| 1247 else | |
| 1248 { | |
| 1249 call.GetDocumentation().AddAnswerType(MimeType_Binary, "The raw frame"); | |
| 1250 } | |
| 1251 return; | |
| 1252 } | |
| 1253 | |
|
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|
1254 std::string frameId = call.GetUriComponent("frame", "0"); |
|
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1255 |
|
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1256 unsigned int frame; |
|
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1257 try |
|
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1258 { |
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1259 frame = boost::lexical_cast<unsigned int>(frameId); |
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1260 } |
|
2836
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1261 catch (boost::bad_lexical_cast&) |
|
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1262 { |
|
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1263 return; |
|
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1264 } |
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1265 |
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1266 std::string publicId = call.GetUriComponent("id", ""); |
|
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1267 std::string raw; |
|
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1268 MimeType mime; |
|
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1269 |
|
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1270 { |
|
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1271 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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1272 locker.GetDicom().GetRawFrame(raw, mime, frame); |
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1273 } |
|
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1274 |
|
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1275 if (GzipCompression) |
|
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1276 { |
|
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1277 GzipCompressor gzip; |
|
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1278 std::string compressed; |
|
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1279 gzip.Compress(compressed, raw.empty() ? NULL : raw.c_str(), raw.size()); |
|
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1280 call.GetOutput().AnswerBuffer(compressed, MimeType_Gzip); |
|
2408
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1281 } |
|
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1282 else |
|
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1283 { |
|
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1284 call.GetOutput().AnswerBuffer(raw, mime); |
|
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1285 } |
|
1924
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1286 } |
|
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1287 |
|
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1288 |
| 974 | 1289 static void GetResourceStatistics(RestApiGetCall& call) |
|
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1290 { |
| 4418 | 1291 if (call.IsDocumentation()) |
| 1292 { | |
| 1293 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1294 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1295 call.GetDocumentation() | |
| 1296 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1297 .SetSummary("Get " + r + " statistics") | |
| 1298 .SetDescription("Get statistics about the given " + r) | |
| 1299 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1300 .SetAnswerField("DiskSize", RestApiCallDocumentation::Type_String, | |
| 1301 "Size of the " + r + " on the disk in bytes, expressed as a string for 64bit compatibility with JSON") | |
| 1302 .SetAnswerField("DiskSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1303 "Size of the " + r + " on the disk, expressed in megabytes (MB)") | |
| 1304 .SetAnswerField("UncompressedSize", RestApiCallDocumentation::Type_String, | |
| 1305 "Size of the " + r + " after decompression in bytes, expressed as a string for 64bit compatibility with JSON") | |
| 1306 .SetAnswerField("UncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1307 "Size of the " + r + " after decompression, expressed in megabytes (MB). " | |
| 1308 "This is different from `DiskSizeMB` iff `StorageCompression` is `true`.") | |
| 1309 .SetAnswerField("DicomDiskSize", RestApiCallDocumentation::Type_String, | |
| 1310 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in bytes") | |
| 1311 .SetAnswerField("DicomDiskSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1312 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
| 1313 .SetAnswerField("DicomUncompressedSize", RestApiCallDocumentation::Type_String, | |
| 1314 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in bytes") | |
| 1315 .SetAnswerField("DicomUncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1316 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
| 1317 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/statistics", true); | |
| 1318 | |
| 1319 switch (t) | |
| 1320 { | |
| 1321 // Do NOT add "break" below this point! | |
| 1322 case ResourceType_Patient: | |
| 1323 call.GetDocumentation().SetAnswerField("CountStudies", RestApiCallDocumentation::Type_Number, | |
| 1324 "Number of child studies within this " + r); | |
| 1325 | |
| 1326 case ResourceType_Study: | |
| 1327 call.GetDocumentation().SetAnswerField("CountSeries", RestApiCallDocumentation::Type_Number, | |
| 1328 "Number of child series within this " + r); | |
| 1329 | |
| 1330 case ResourceType_Series: | |
| 1331 call.GetDocumentation().SetAnswerField("CountInstances", RestApiCallDocumentation::Type_Number, | |
| 1332 "Number of child instances within this " + r); | |
| 1333 | |
| 1334 case ResourceType_Instance: | |
| 1335 default: | |
| 1336 break; | |
| 1337 } | |
| 1338 | |
| 1339 return; | |
| 1340 } | |
| 1341 | |
|
3174
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1342 static const uint64_t MEGA_BYTES = 1024 * 1024; |
|
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1343 |
|
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1344 std::string publicId = call.GetUriComponent("id", ""); |
|
3174
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1345 |
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1346 ResourceType type; |
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1347 uint64_t diskSize, uncompressedSize, dicomDiskSize, dicomUncompressedSize; |
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1348 unsigned int countStudies, countSeries, countInstances; |
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1349 OrthancRestApi::GetIndex(call).GetResourceStatistics( |
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1350 type, diskSize, uncompressedSize, countStudies, countSeries, |
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1351 countInstances, dicomDiskSize, dicomUncompressedSize, publicId); |
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1352 |
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1353 Json::Value result = Json::objectValue; |
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1354 result["DiskSize"] = boost::lexical_cast<std::string>(diskSize); |
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1355 result["DiskSizeMB"] = static_cast<unsigned int>(diskSize / MEGA_BYTES); |
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1356 result["UncompressedSize"] = boost::lexical_cast<std::string>(uncompressedSize); |
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1357 result["UncompressedSizeMB"] = static_cast<unsigned int>(uncompressedSize / MEGA_BYTES); |
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1358 |
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1359 result["DicomDiskSize"] = boost::lexical_cast<std::string>(dicomDiskSize); |
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1360 result["DicomDiskSizeMB"] = static_cast<unsigned int>(dicomDiskSize / MEGA_BYTES); |
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1361 result["DicomUncompressedSize"] = boost::lexical_cast<std::string>(dicomUncompressedSize); |
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1362 result["DicomUncompressedSizeMB"] = static_cast<unsigned int>(dicomUncompressedSize / MEGA_BYTES); |
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1363 |
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1364 switch (type) |
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1365 { |
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1366 // Do NOT add "break" below this point! |
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1367 case ResourceType_Patient: |
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1368 result["CountStudies"] = countStudies; |
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1369 |
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1370 case ResourceType_Study: |
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1371 result["CountSeries"] = countSeries; |
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1372 |
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1373 case ResourceType_Series: |
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1374 result["CountInstances"] = countInstances; |
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1375 |
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1376 case ResourceType_Instance: |
|
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1377 default: |
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1378 break; |
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1379 } |
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1380 |
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|
1381 call.GetOutput().AnswerJson(result); |
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1382 } |
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1383 |
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1384 |
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|
1385 |
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|
1386 // Handling of metadata ----------------------------------------------------- |
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1387 |
| 4205 | 1388 static void CheckValidResourceType(const RestApiCall& call) |
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1389 { |
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1390 assert(!call.GetFullUri().empty()); |
| 4409 | 1391 const std::string resourceType = call.GetFullUri() [0]; |
|
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1392 StringToResourceType(resourceType.c_str()); |
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1393 } |
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|
1394 |
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|
1395 |
| 974 | 1396 static void ListMetadata(RestApiGetCall& call) |
|
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|
1397 { |
| 4414 | 1398 if (call.IsDocumentation()) |
| 1399 { | |
| 1400 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1401 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1402 call.GetDocumentation() | |
| 1403 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1404 .SetSummary("List metadata") | |
| 1405 .SetDescription("Get the list of metadata that are associated with the given " + r) | |
| 1406 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1407 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, | |
| 1408 "If present, also retrieve the value of the individual metadata", false) | |
| 1409 .AddAnswerType(MimeType_Json, "JSON array containing the names of the available metadata, " | |
| 1410 "or JSON associative array mapping metadata to their values (if `expand` argument is provided)") | |
| 1411 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/metadata", true); | |
| 1412 return; | |
| 1413 } | |
| 1414 | |
|
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|
1415 assert(!call.GetFullUri().empty()); |
| 4554 | 1416 const std::string publicId = call.GetUriComponent("id", ""); |
| 1417 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); | |
|
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1418 |
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1419 typedef std::map<MetadataType, std::string> Metadata; |
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1420 |
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1421 Metadata metadata; |
| 4554 | 1422 OrthancRestApi::GetIndex(call).GetAllMetadata(metadata, publicId, level); |
|
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1423 |
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1424 Json::Value result; |
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1425 |
|
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|
1426 if (call.HasArgument("expand")) |
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1427 { |
|
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1428 result = Json::objectValue; |
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1429 |
|
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1430 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
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1431 { |
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1432 std::string key = EnumerationToString(it->first); |
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1433 result[key] = it->second; |
|
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1434 } |
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1435 } |
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1436 else |
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1437 { |
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1438 result = Json::arrayValue; |
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1439 |
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1440 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
|
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1441 { |
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1442 result.append(EnumerationToString(it->first)); |
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1443 } |
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1444 } |
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1445 |
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1446 call.GetOutput().AnswerJson(result); |
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1447 } |
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1448 |
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1449 |
| 974 | 1450 static void GetMetadata(RestApiGetCall& call) |
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1451 { |
| 4414 | 1452 if (call.IsDocumentation()) |
| 1453 { | |
| 1454 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1455 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1456 call.GetDocumentation() | |
| 1457 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1458 .SetSummary("Get metadata") | |
| 1459 .SetDescription("Get the value of a metadata that is associated with the given " + r) | |
| 1460 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1461 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
| 1462 .AddAnswerType(MimeType_PlainText, "Value of the metadata"); | |
| 1463 return; | |
| 1464 } | |
| 1465 | |
|
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1466 assert(!call.GetFullUri().empty()); |
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1467 const std::string publicId = call.GetUriComponent("id", ""); |
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1468 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
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1469 |
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1470 std::string name = call.GetUriComponent("name", ""); |
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1471 MetadataType metadata = StringToMetadata(name); |
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1472 |
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|
1473 std::string value; |
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1474 if (OrthancRestApi::GetIndex(call).LookupMetadata(value, publicId, level, metadata)) |
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1475 { |
|
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1476 call.GetOutput().AnswerBuffer(value, MimeType_PlainText); |
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1477 } |
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1478 } |
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1479 |
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1480 |
| 974 | 1481 static void DeleteMetadata(RestApiDeleteCall& call) |
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1482 { |
| 4414 | 1483 if (call.IsDocumentation()) |
| 1484 { | |
| 1485 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1486 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1487 call.GetDocumentation() | |
| 1488 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1489 .SetSummary("Delete metadata") | |
| 1490 .SetDescription("Delete some metadata associated with the given DICOM " + r + | |
| 1491 ". This call will fail if trying to delete a system metadata (i.e. whose index is < 1024).") | |
| 1492 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1493 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)"); | |
| 1494 return; | |
| 1495 } | |
| 1496 | |
|
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1497 CheckValidResourceType(call); |
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1498 |
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1499 std::string publicId = call.GetUriComponent("id", ""); |
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1500 std::string name = call.GetUriComponent("name", ""); |
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1501 MetadataType metadata = StringToMetadata(name); |
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1502 |
|
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1503 if (IsUserMetadata(metadata)) // It is forbidden to modify internal metadata |
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1504 { |
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1505 OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata); |
|
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1506 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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1507 } |
|
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1508 else |
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1509 { |
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1510 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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1511 } |
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1512 } |
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1513 |
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1514 |
| 974 | 1515 static void SetMetadata(RestApiPutCall& call) |
|
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1516 { |
| 4414 | 1517 if (call.IsDocumentation()) |
| 1518 { | |
| 1519 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1520 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1521 call.GetDocumentation() | |
| 1522 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1523 .SetSummary("Set metadata") | |
| 1524 .SetDescription("Set the value of some metadata in the given DICOM " + r + | |
| 1525 ". This call will fail if trying to modify a system metadata (i.e. whose index is < 1024).") | |
| 1526 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1527 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
| 1528 .AddRequestType(MimeType_PlainText, "String value of the metadata"); | |
| 1529 return; | |
| 1530 } | |
| 1531 | |
|
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1532 CheckValidResourceType(call); |
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|
1533 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1534 std::string publicId = call.GetUriComponent("id", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1535 std::string name = call.GetUriComponent("name", ""); |
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5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1536 MetadataType metadata = StringToMetadata(name); |
|
1446
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
1537 |
|
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
1538 std::string value; |
|
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
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|
1539 call.BodyToString(value); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1540 |
|
1773
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1759
diff
changeset
|
1541 if (IsUserMetadata(metadata)) // It is forbidden to modify internal metadata |
|
751
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1542 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1543 // It is forbidden to modify internal metadata |
|
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1544 OrthancRestApi::GetIndex(call).SetMetadata(publicId, metadata, value); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
1545 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
751
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1546 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
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|
1547 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
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|
1548 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
1549 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
1550 } |
|
751
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1551 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1552 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1553 |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1554 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1555 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1556 // Handling of attached files ----------------------------------------------- |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1557 |
| 974 | 1558 static void ListAttachments(RestApiGetCall& call) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1559 { |
| 4409 | 1560 if (call.IsDocumentation()) |
| 1561 { | |
| 1562 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1563 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1564 call.GetDocumentation() | |
| 1565 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1566 .SetSummary("List attachments") | |
| 1567 .SetDescription("Get the list of attachments that are associated with the given " + r) | |
| 1568 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1569 .AddAnswerType(MimeType_Json, "JSON array containing the names of the attachments") | |
| 1570 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/attachments", true); | |
| 1571 return; | |
| 1572 } | |
| 1573 | |
| 1574 const std::string resourceType = call.GetFullUri() [0]; | |
| 1575 const std::string publicId = call.GetUriComponent("id", ""); | |
|
4514
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4513
diff
changeset
|
1576 std::set<FileContentType> attachments; |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1577 OrthancRestApi::GetIndex(call).ListAvailableAttachments(attachments, publicId, StringToResourceType(resourceType.c_str())); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1578 |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1579 Json::Value result = Json::arrayValue; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1580 |
|
4514
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4513
diff
changeset
|
1581 for (std::set<FileContentType>::const_iterator |
|
751
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1582 it = attachments.begin(); it != attachments.end(); ++it) |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1583 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1584 result.append(EnumerationToString(*it)); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1585 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1586 |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1587 call.GetOutput().AnswerJson(result); |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1588 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1589 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1590 |
| 974 | 1591 static bool GetAttachmentInfo(FileInfo& info, RestApiCall& call) |
|
751
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1592 { |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1593 CheckValidResourceType(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1594 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1595 std::string publicId = call.GetUriComponent("id", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1596 std::string name = call.GetUriComponent("name", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1597 FileContentType contentType = StringToContentType(name); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1598 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1599 return OrthancRestApi::GetIndex(call).LookupAttachment(info, publicId, contentType); |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1600 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1601 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1602 |
| 974 | 1603 static void GetAttachmentOperations(RestApiGetCall& call) |
|
751
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1604 { |
| 4409 | 1605 if (call.IsDocumentation()) |
| 1606 { | |
| 1607 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1608 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1609 call.GetDocumentation() | |
| 1610 .SetTag("Other") | |
| 4414 | 1611 .SetSummary("List operations on attachments") |
| 1612 .SetDescription("Get the list of the operations that are available for attachments associated with the given " + r) | |
| 4409 | 1613 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
| 4414 | 1614 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
| 4409 | 1615 .AddAnswerType(MimeType_Json, "List of the available operations") |
| 1616 .SetHttpGetSample("https://demo.orthanc-server.com/instances/d94d9a03-3003b047-a4affc69-322313b2-680530a2/attachments/dicom", true); | |
| 1617 return; | |
| 1618 } | |
| 1619 | |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
1620 FileInfo info; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1621 if (GetAttachmentInfo(info, call)) |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1622 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1623 Json::Value operations = Json::arrayValue; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1624 |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
1625 operations.append("compress"); |
|
751
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parents:
diff
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|
1626 operations.append("compressed-data"); |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1627 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1628 if (info.GetCompressedMD5() != "") |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1629 { |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1630 operations.append("compressed-md5"); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1631 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1632 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1633 operations.append("compressed-size"); |
|
5197fd35333c
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parents:
diff
changeset
|
1634 operations.append("data"); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
1635 operations.append("is-compressed"); |
|
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diff
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|
1636 |
|
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parents:
diff
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|
1637 if (info.GetUncompressedMD5() != "") |
|
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1638 { |
|
5197fd35333c
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diff
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|
1639 operations.append("md5"); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1640 } |
|
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parents:
diff
changeset
|
1641 |
|
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parents:
diff
changeset
|
1642 operations.append("size"); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
1643 operations.append("uncompress"); |
|
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|
1644 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1645 if (info.GetCompressedMD5() != "" && |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1646 info.GetUncompressedMD5() != "") |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1647 { |
|
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parents:
diff
changeset
|
1648 operations.append("verify-md5"); |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1649 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1650 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1651 call.GetOutput().AnswerJson(operations); |
|
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refactoring of OrthancRestApi
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parents:
diff
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|
1652 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1653 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1654 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1655 |
|
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diff
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|
1656 template <int uncompress> |
| 974 | 1657 static void GetAttachmentData(RestApiGetCall& call) |
|
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|
1658 { |
| 4409 | 1659 if (call.IsDocumentation()) |
| 1660 { | |
| 1661 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1662 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1663 call.GetDocumentation() | |
| 1664 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1665 .SetSummary("Get attachment" + std::string(uncompress ? "" : " (no decompression)")) | |
| 1666 .SetDescription("Get the (binary) content of one attachment associated with the given " + r + | |
| 4418 | 1667 std::string(uncompress ? "" : ". The attachment will not be decompressed if `StorageCompression` is `true`.")) |
| 4409 | 1668 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
| 4414 | 1669 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
| 4409 | 1670 .AddAnswerType(MimeType_Binary, "The attachment"); |
| 1671 return; | |
| 1672 } | |
| 1673 | |
|
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|
1674 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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|
1675 |
|
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|
1676 CheckValidResourceType(call); |
|
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|
1677 |
|
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diff
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|
1678 std::string publicId = call.GetUriComponent("id", ""); |
|
1146
200fcac0deb4
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diff
changeset
|
1679 FileContentType type = StringToContentType(call.GetUriComponent("name", "")); |
|
751
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|
1680 |
|
1146
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diff
changeset
|
1681 if (uncompress) |
|
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1145
diff
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|
1682 { |
|
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1145
diff
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|
1683 context.AnswerAttachment(call.GetOutput(), publicId, type); |
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1684 } |
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1685 else |
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1686 { |
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|
1687 // Return the raw data (possibly compressed), as stored on the filesystem |
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1688 std::string content; |
|
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|
1689 context.ReadAttachment(content, publicId, type, false); |
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1690 call.GetOutput().AnswerBuffer(content, MimeType_Binary); |
|
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1691 } |
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1692 } |
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1693 |
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1694 |
| 974 | 1695 static void GetAttachmentSize(RestApiGetCall& call) |
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1696 { |
| 4409 | 1697 if (call.IsDocumentation()) |
| 1698 { | |
| 1699 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1700 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1701 call.GetDocumentation() | |
| 1702 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1703 .SetSummary("Get size of attachment") | |
| 1704 .SetDescription("Get the size of one attachment associated with the given " + r) | |
| 1705 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 1706 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
| 4409 | 1707 .AddAnswerType(MimeType_PlainText, "The size of the attachment"); |
| 1708 return; | |
| 1709 } | |
| 1710 | |
|
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|
1711 FileInfo info; |
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1712 if (GetAttachmentInfo(info, call)) |
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1713 { |
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1714 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedSize()), MimeType_PlainText); |
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1715 } |
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1716 } |
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1717 |
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1718 |
| 974 | 1719 static void GetAttachmentCompressedSize(RestApiGetCall& call) |
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1720 { |
| 4409 | 1721 if (call.IsDocumentation()) |
| 1722 { | |
| 1723 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1724 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1725 call.GetDocumentation() | |
| 1726 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 4410 | 1727 .SetSummary("Get size of attachment on disk") |
| 4409 | 1728 .SetDescription("Get the size of one attachment associated with the given " + r + ", as stored on the disk. " |
| 4413 | 1729 "This is different from `.../size` iff `EnableStorage` is `true`.") |
| 4409 | 1730 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
| 4414 | 1731 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
| 4410 | 1732 .AddAnswerType(MimeType_PlainText, "The size of the attachment, as stored on the disk"); |
| 4409 | 1733 return; |
| 1734 } | |
| 1735 | |
|
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1736 FileInfo info; |
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|
1737 if (GetAttachmentInfo(info, call)) |
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1738 { |
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1739 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedSize()), MimeType_PlainText); |
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1740 } |
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1741 } |
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|
1742 |
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1743 |
| 974 | 1744 static void GetAttachmentMD5(RestApiGetCall& call) |
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1745 { |
| 4410 | 1746 if (call.IsDocumentation()) |
| 1747 { | |
| 1748 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1749 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1750 call.GetDocumentation() | |
| 1751 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1752 .SetSummary("Get MD5 of attachment") | |
| 1753 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r) | |
| 1754 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 1755 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
| 4410 | 1756 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment"); |
| 1757 return; | |
| 1758 } | |
| 1759 | |
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1760 FileInfo info; |
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1761 if (GetAttachmentInfo(info, call) && |
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1762 info.GetUncompressedMD5() != "") |
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1763 { |
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1764 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedMD5()), MimeType_PlainText); |
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1765 } |
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1766 } |
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|
1767 |
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1768 |
| 974 | 1769 static void GetAttachmentCompressedMD5(RestApiGetCall& call) |
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1770 { |
| 4410 | 1771 if (call.IsDocumentation()) |
| 1772 { | |
| 1773 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1774 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1775 call.GetDocumentation() | |
| 1776 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1777 .SetSummary("Get MD5 of attachment on disk") | |
| 1778 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r + ", as stored on the disk. " | |
| 4413 | 1779 "This is different from `.../md5` iff `EnableStorage` is `true`.") |
| 4410 | 1780 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
| 4414 | 1781 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
| 4410 | 1782 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment, as stored on the disk"); |
| 1783 return; | |
| 1784 } | |
| 1785 | |
|
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1786 FileInfo info; |
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1787 if (GetAttachmentInfo(info, call) && |
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|
1788 info.GetCompressedMD5() != "") |
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1789 { |
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|
1790 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedMD5()), MimeType_PlainText); |
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|
1791 } |
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|
1792 } |
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|
1793 |
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1794 |
| 974 | 1795 static void VerifyAttachment(RestApiPostCall& call) |
|
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1796 { |
| 4410 | 1797 if (call.IsDocumentation()) |
| 1798 { | |
| 1799 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1800 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1801 call.GetDocumentation() | |
| 1802 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1803 .SetSummary("Verify attachment") | |
| 1804 .SetDescription("Verify that the attachment is not corrupted, by validating its MD5 hash") | |
| 1805 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 1806 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
| 4410 | 1807 .AddAnswerType(MimeType_Json, "On success, a valid JSON object is returned"); |
| 1808 return; | |
| 1809 } | |
| 1810 | |
|
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1811 ServerContext& context = OrthancRestApi::GetContext(call); |
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|
1812 CheckValidResourceType(call); |
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|
1813 |
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1814 std::string publicId = call.GetUriComponent("id", ""); |
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1815 std::string name = call.GetUriComponent("name", ""); |
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1816 |
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1817 FileInfo info; |
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1818 if (!GetAttachmentInfo(info, call) || |
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1819 info.GetCompressedMD5() == "" || |
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1820 info.GetUncompressedMD5() == "") |
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1821 { |
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1822 // Inexistent resource, or no MD5 available |
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1823 return; |
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1824 } |
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1825 |
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1826 bool ok = false; |
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1827 |
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1828 // First check whether the compressed data is correctly stored in the disk |
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1829 std::string data; |
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1830 context.ReadAttachment(data, publicId, StringToContentType(name), false); |
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1831 |
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1832 std::string actualMD5; |
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1833 Toolbox::ComputeMD5(actualMD5, data); |
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1834 |
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1835 if (actualMD5 == info.GetCompressedMD5()) |
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1836 { |
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1837 // The compressed data is OK. If a compression algorithm was |
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1838 // applied to it, now check the MD5 of the uncompressed data. |
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1839 if (info.GetCompressionType() == CompressionType_None) |
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1840 { |
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1841 ok = true; |
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1842 } |
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1843 else |
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1844 { |
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1845 context.ReadAttachment(data, publicId, StringToContentType(name), true); |
|
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1846 Toolbox::ComputeMD5(actualMD5, data); |
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1847 ok = (actualMD5 == info.GetUncompressedMD5()); |
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1848 } |
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1849 } |
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1850 |
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1851 if (ok) |
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1852 { |
|
4294
0923247e69f6
log categories: rest -> http + added lua & jobs
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1853 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has the right MD5"; |
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1854 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
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1855 } |
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1856 else |
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1857 { |
|
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1858 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has bad MD5!"; |
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1859 } |
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1860 } |
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1861 |
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1862 |
| 974 | 1863 static void UploadAttachment(RestApiPutCall& call) |
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1864 { |
| 4414 | 1865 if (call.IsDocumentation()) |
| 1866 { | |
| 1867 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1868 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1869 call.GetDocumentation() | |
| 1870 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1871 .SetSummary("Set attachment") | |
| 1872 .SetDescription("Attach a file to the given DICOM " + r + | |
| 1873 ". This call will fail if trying to modify a system attachment (i.e. whose index is < 1024).") | |
| 1874 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1875 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") | |
| 1876 .AddRequestType(MimeType_Binary, "Binary data containing the attachment") | |
| 1877 .AddAnswerType(MimeType_Json, "Empty JSON object in the case of a success"); | |
| 1878 return; | |
| 1879 } | |
| 1880 | |
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1881 ServerContext& context = OrthancRestApi::GetContext(call); |
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1882 CheckValidResourceType(call); |
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1883 |
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1884 std::string publicId = call.GetUriComponent("id", ""); |
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1885 std::string name = call.GetUriComponent("name", ""); |
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1886 |
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1887 FileContentType contentType = StringToContentType(name); |
|
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1888 if (IsUserContentType(contentType) && // It is forbidden to modify internal attachments |
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1889 context.AddAttachment(publicId, StringToContentType(name), call.GetBodyData(), call.GetBodySize())) |
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1890 { |
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1891 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
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1892 } |
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1893 else |
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1894 { |
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1895 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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1896 } |
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1897 } |
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1898 |
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1899 |
| 974 | 1900 static void DeleteAttachment(RestApiDeleteCall& call) |
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1901 { |
| 4413 | 1902 if (call.IsDocumentation()) |
| 1903 { | |
| 1904 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1905 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1906 call.GetDocumentation() | |
| 1907 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1908 .SetSummary("Delete attachment") | |
| 4414 | 1909 .SetDescription("Delete an attachment associated with the given DICOM " + r + |
| 1910 ". This call will fail if trying to delete a system attachment (i.e. whose index is < 1024).") | |
| 4413 | 1911 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
| 4414 | 1912 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)"); |
| 4413 | 1913 return; |
| 1914 } | |
| 1915 | |
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1916 CheckValidResourceType(call); |
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1917 |
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1918 std::string publicId = call.GetUriComponent("id", ""); |
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1919 std::string name = call.GetUriComponent("name", ""); |
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1920 FileContentType contentType = StringToContentType(name); |
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1921 |
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1922 bool allowed; |
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1923 if (IsUserContentType(contentType)) |
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1924 { |
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1925 allowed = true; |
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1926 } |
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1927 else |
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1928 { |
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1929 OrthancConfiguration::ReaderLock lock; |
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1930 |
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1931 if (lock.GetConfiguration().GetBooleanParameter("StoreDicom", true) && |
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1932 contentType == FileContentType_DicomAsJson) |
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1933 { |
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1934 allowed = true; |
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1935 } |
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1936 else |
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1937 { |
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1938 // It is forbidden to delete internal attachments, except for |
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1939 // the "DICOM as JSON" summary as of Orthanc 1.2.0 (this summary |
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1940 // would be automatically reconstructed on the next GET call) |
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1941 allowed = false; |
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1942 } |
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1943 } |
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1944 |
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1945 if (allowed) |
|
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1946 { |
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1947 OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType); |
|
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1948 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
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1949 } |
|
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1950 else |
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1951 { |
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1952 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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1953 } |
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1954 } |
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1955 |
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1956 |
|
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1957 template <enum CompressionType compression> |
|
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1958 static void ChangeAttachmentCompression(RestApiPostCall& call) |
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1959 { |
| 4413 | 1960 if (call.IsDocumentation()) |
| 1961 { | |
| 1962 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1963 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1964 call.GetDocumentation() | |
| 1965 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1966 .SetSummary(compression == CompressionType_None ? "Uncompress attachment" : "Compress attachment") | |
| 1967 .SetDescription("Change the compression scheme that is used to store an attachment.") | |
| 1968 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 1969 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)"); |
| 4413 | 1970 return; |
| 1971 } | |
| 1972 | |
|
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1973 CheckValidResourceType(call); |
|
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1974 |
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1975 std::string publicId = call.GetUriComponent("id", ""); |
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1976 std::string name = call.GetUriComponent("name", ""); |
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1977 FileContentType contentType = StringToContentType(name); |
|
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1978 |
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1979 OrthancRestApi::GetContext(call).ChangeAttachmentCompression(publicId, contentType, compression); |
|
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1980 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
1700
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1981 } |
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1982 |
|
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|
1983 |
|
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1984 static void IsAttachmentCompressed(RestApiGetCall& call) |
|
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|
1985 { |
| 4413 | 1986 if (call.IsDocumentation()) |
| 1987 { | |
| 1988 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1989 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1990 call.GetDocumentation() | |
| 1991 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1992 .SetSummary("Is attachment compressed?") | |
| 1993 .SetDescription("Test whether the attachment has been stored as a compressed file on the disk.") | |
| 1994 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 1995 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
| 4413 | 1996 .AddAnswerType(MimeType_PlainText, "`0` if the attachment was stored uncompressed, `1` if it was compressed"); |
| 1997 return; | |
| 1998 } | |
| 1999 | |
|
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|
2000 FileInfo info; |
|
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|
2001 if (GetAttachmentInfo(info, call)) |
|
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2002 { |
|
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2003 std::string answer = (info.GetCompressionType() == CompressionType_None) ? "0" : "1"; |
|
2908
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2004 call.GetOutput().AnswerBuffer(answer, MimeType_PlainText); |
|
1700
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2005 } |
|
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2006 } |
|
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2007 |
|
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|
2008 |
| 782 | 2009 // Raw access to the DICOM tags of an instance ------------------------------ |
| 2010 | |
| 974 | 2011 static void GetRawContent(RestApiGetCall& call) |
| 782 | 2012 { |
|
4405
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2013 if (call.IsDocumentation()) |
|
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2014 { |
|
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2015 call.GetDocumentation() |
|
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2016 .SetTag("Instances") |
|
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2017 .SetSummary("Get raw tag") |
|
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2018 .SetDescription("Get the raw content of one DICOM tag in the hierarchy of DICOM dataset") |
|
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2019 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
|
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2020 .SetUriArgument("...", "Path to the DICOM tag. This is the interleaving of one DICOM tag, possibly followed " |
|
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2021 "by an index for sequences. Sequences are accessible as, for instance, `/0008-1140/1/0008-1150`") |
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2022 .AddAnswerType(MimeType_Binary, "The raw value of the tag of intereset " |
|
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2023 "(binary data, whose memory layout depends on the underlying transfer syntax), " |
|
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2024 "or JSON array containing the list of available tags if accessing a dataset"); |
|
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2025 return; |
|
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2026 } |
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2027 |
| 782 | 2028 std::string id = call.GetUriComponent("id", ""); |
| 2029 | |
| 2030 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); | |
| 2031 | |
| 2032 locker.GetDicom().SendPathValue(call.GetOutput(), call.GetTrailingUri()); | |
| 2033 } | |
| 2034 | |
|
751
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2035 |
|
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2036 |
|
960
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2037 static bool ExtractSharedTags(Json::Value& shared, |
|
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2038 ServerContext& context, |
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2039 const std::string& publicId) |
|
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2040 { |
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2041 // Retrieve all the instances of this patient/study/series |
|
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2042 typedef std::list<std::string> Instances; |
|
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2043 Instances instances; |
|
959
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2044 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
|
958
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2045 |
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2046 // Loop over the instances |
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2047 bool isFirst = true; |
|
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2048 shared = Json::objectValue; |
|
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2049 |
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2050 for (Instances::const_iterator it = instances.begin(); |
| 1303 | 2051 it != instances.end(); ++it) |
|
958
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2052 { |
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2053 // Get the tags of the current instance, in the simplified format |
|
960
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2054 Json::Value tags; |
|
959
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2055 |
|
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2056 try |
|
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|
2057 { |
| 2124 | 2058 context.ReadDicomAsJson(tags, *it); |
|
959
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|
2059 } |
|
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|
2060 catch (OrthancException&) |
|
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|
2061 { |
|
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2062 // Race condition: This instance has been removed since |
|
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2063 // (*). Ignore this instance. |
|
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2064 continue; |
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2065 } |
|
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|
2066 |
|
960
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2067 if (tags.type() != Json::objectValue) |
|
958
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2068 { |
|
960
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2069 return false; // Error |
|
958
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2070 } |
|
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2071 |
|
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2072 // Only keep the tags that are mapped to a string |
|
960
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2073 Json::Value::Members members = tags.getMemberNames(); |
|
958
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2074 for (size_t i = 0; i < members.size(); i++) |
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2075 { |
|
960
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2076 const Json::Value& tag = tags[members[i]]; |
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2077 if (tag.type() != Json::objectValue || |
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2078 tag["Type"].type() != Json::stringValue || |
|
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|
2079 tag["Type"].asString() != "String") |
|
958
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|
2080 { |
|
960
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2081 tags.removeMember(members[i]); |
|
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2082 } |
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2083 } |
|
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2084 |
|
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2085 if (isFirst) |
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2086 { |
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2087 // This is the first instance, keep its tags as such |
|
960
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2088 shared = tags; |
|
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2089 isFirst = false; |
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2090 } |
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2091 else |
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2092 { |
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2093 // Loop over all the members of the shared tags extracted so |
|
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2094 // far. If the value of one of these tags does not match its |
|
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2095 // value in the current instance, remove it. |
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2096 members = shared.getMemberNames(); |
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2097 for (size_t i = 0; i < members.size(); i++) |
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2098 { |
|
960
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2099 if (!tags.isMember(members[i]) || |
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2100 tags[members[i]]["Value"].asString() != shared[members[i]]["Value"].asString()) |
|
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2101 { |
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2102 shared.removeMember(members[i]); |
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2103 } |
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2104 } |
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2105 } |
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2106 } |
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2107 |
|
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2108 return true; |
|
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2109 } |
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2110 |
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|
2111 |
| 974 | 2112 static void GetSharedTags(RestApiGetCall& call) |
|
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2113 { |
|
4416
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2114 if (call.IsDocumentation()) |
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2115 { |
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2116 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
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2117 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
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2118 call.GetDocumentation() |
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2119 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
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2120 .SetSummary("Get shared tags") |
|
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2121 .SetDescription("Extract the DICOM tags whose value is constant across all the child instances of " |
|
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2122 "the DICOM " + r + " whose Orthanc identifier is provided in the URL") |
|
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2123 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
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2124 .AddAnswerType(MimeType_Json, "JSON object containing the values of the DICOM tags") |
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2125 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/shared-tags", 5); |
|
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2126 return; |
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2127 } |
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2128 |
|
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2129 ServerContext& context = OrthancRestApi::GetContext(call); |
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2130 std::string publicId = call.GetUriComponent("id", ""); |
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2131 |
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2132 Json::Value sharedTags; |
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2133 if (ExtractSharedTags(sharedTags, context, publicId)) |
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2134 { |
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2135 // Success: Send the value of the shared tags |
|
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2136 AnswerDicomAsJson(call, sharedTags); |
|
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2137 } |
|
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2138 } |
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2139 |
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2140 |
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2141 static void GetModuleInternal(RestApiGetCall& call, |
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2142 ResourceType resourceType, |
|
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2143 DicomModule module) |
|
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2144 { |
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2145 if (!((resourceType == ResourceType_Patient && module == DicomModule_Patient) || |
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2146 (resourceType == ResourceType_Study && module == DicomModule_Patient) || |
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2147 (resourceType == ResourceType_Study && module == DicomModule_Study) || |
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2148 (resourceType == ResourceType_Series && module == DicomModule_Series) || |
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2149 (resourceType == ResourceType_Instance && module == DicomModule_Instance) || |
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2150 (resourceType == ResourceType_Instance && module == DicomModule_Image))) |
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2151 { |
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2152 throw OrthancException(ErrorCode_NotImplemented); |
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2153 } |
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2154 |
|
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2155 ServerContext& context = OrthancRestApi::GetContext(call); |
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2156 std::string publicId = call.GetUriComponent("id", ""); |
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2157 |
|
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2158 std::set<DicomTag> ignoreTagLength; |
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2159 ParseSetOfTags(ignoreTagLength, call, "ignore-length"); |
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2160 |
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2161 typedef std::set<DicomTag> ModuleTags; |
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2162 ModuleTags moduleTags; |
| 1368 | 2163 DicomTag::AddTagsForModule(moduleTags, module); |
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2164 |
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2165 Json::Value tags; |
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2166 |
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2167 if (resourceType != ResourceType_Instance) |
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2168 { |
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2169 // Retrieve all the instances of this patient/study/series |
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2170 typedef std::list<std::string> Instances; |
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2171 Instances instances; |
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2172 context.GetIndex().GetChildInstances(instances, publicId); |
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2173 |
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2174 if (instances.empty()) |
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2175 { |
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2176 return; // Error: No instance (should never happen) |
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2177 } |
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2178 |
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2179 // Select one child instance |
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2180 publicId = instances.front(); |
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2181 } |
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2182 |
|
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2183 context.ReadDicomAsJson(tags, publicId, ignoreTagLength); |
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2184 |
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2185 // Filter the tags of the instance according to the module |
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2186 Json::Value result = Json::objectValue; |
| 1303 | 2187 for (ModuleTags::const_iterator tag = moduleTags.begin(); tag != moduleTags.end(); ++tag) |
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2188 { |
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2189 std::string s = tag->Format(); |
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2190 if (tags.isMember(s)) |
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2191 { |
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2192 result[s] = tags[s]; |
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2193 } |
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2194 } |
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2195 |
|
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2196 AnswerDicomAsJson(call, result); |
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2197 } |
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2198 |
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2199 |
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2200 |
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|
2201 template <enum ResourceType resourceType, |
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2202 enum DicomModule module> |
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2203 static void GetModule(RestApiGetCall& call) |
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2204 { |
| 4419 | 2205 if (call.IsDocumentation()) |
| 2206 { | |
| 2207 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); | |
| 2208 std::string m; | |
| 2209 switch (module) | |
| 2210 { | |
| 2211 case DicomModule_Patient: | |
| 2212 m = "patient"; | |
| 2213 break; | |
| 2214 case DicomModule_Study: | |
| 2215 m = "study"; | |
| 2216 break; | |
| 2217 case DicomModule_Series: | |
| 2218 m = "series"; | |
| 2219 break; | |
| 2220 case DicomModule_Instance: | |
| 2221 m = "instance"; | |
| 2222 break; | |
| 2223 default: | |
| 2224 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
| 2225 } | |
| 2226 call.GetDocumentation() | |
| 2227 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) | |
| 2228 .SetSummary("Get " + m + " module" + std::string(resource == m ? "" : " of " + resource)) | |
| 2229 .SetDescription("Get the " + m + " module of the DICOM " + resource + " whose Orthanc identifier is provided in the URL") | |
| 2230 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") | |
| 2231 .SetHttpGetArgument("ignore-length", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 2232 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) | |
| 2233 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) | |
| 2234 .SetHttpGetSample(GetDocumentationSampleResource(resourceType) + "/" + (*call.GetFullUri().rbegin()), true); | |
| 2235 return; | |
| 2236 } | |
| 2237 | |
|
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2238 GetModuleInternal(call, resourceType, module); |
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2239 } |
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2240 |
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2241 |
| 1722 | 2242 namespace |
| 2243 { | |
| 2244 typedef std::list< std::pair<ResourceType, std::string> > LookupResults; | |
| 2245 } | |
| 2246 | |
| 2247 | |
| 2248 static void AccumulateLookupResults(LookupResults& result, | |
|
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2249 ServerIndex& index, |
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2250 const DicomTag& tag, |
|
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2251 const std::string& value, |
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2252 ResourceType level) |
|
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2253 { |
|
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2254 std::vector<std::string> tmp; |
|
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2255 index.LookupIdentifierExact(tmp, level, tag, value); |
|
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2256 |
|
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2257 for (size_t i = 0; i < tmp.size(); i++) |
|
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2258 { |
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2259 result.push_back(std::make_pair(level, tmp[i])); |
|
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2260 } |
|
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2261 } |
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2262 |
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2263 |
|
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2264 static void Lookup(RestApiPostCall& call) |
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2265 { |
| 4422 | 2266 if (call.IsDocumentation()) |
| 2267 { | |
| 2268 call.GetDocumentation() | |
| 2269 .SetTag("System") | |
| 2270 .SetSummary("Look for DICOM identifiers") | |
| 2271 .SetDescription("This URI can be used to convert one DICOM identifier to a list of matching Orthanc resources") | |
| 2272 .AddRequestType(MimeType_PlainText, "The DICOM identifier of interest (i.e. the value of `PatientID`, " | |
| 2273 "`StudyInstanceUID`, `SeriesInstanceUID`, or `SOPInstanceUID`)") | |
| 2274 .AddAnswerType(MimeType_Json, "JSON array containing a list of matching Orthanc resources, each item in the " | |
| 2275 "list corresponding to a JSON object with the fields `Type`, `ID` and `Path` identifying one " | |
| 2276 "DICOM resource that is stored by Orthanc"); | |
| 2277 return; | |
| 2278 } | |
| 2279 | |
|
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2280 std::string tag; |
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2281 call.BodyToString(tag); |
|
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2282 |
| 1722 | 2283 LookupResults resources; |
|
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2284 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
1719
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2285 AccumulateLookupResults(resources, index, DICOM_TAG_PATIENT_ID, tag, ResourceType_Patient); |
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2286 AccumulateLookupResults(resources, index, DICOM_TAG_STUDY_INSTANCE_UID, tag, ResourceType_Study); |
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2287 AccumulateLookupResults(resources, index, DICOM_TAG_SERIES_INSTANCE_UID, tag, ResourceType_Series); |
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2288 AccumulateLookupResults(resources, index, DICOM_TAG_SOP_INSTANCE_UID, tag, ResourceType_Instance); |
|
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2289 |
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2290 Json::Value result = Json::arrayValue; |
| 1722 | 2291 for (LookupResults::const_iterator |
|
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2292 it = resources.begin(); it != resources.end(); ++it) |
|
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2293 { |
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2294 ResourceType type = it->first; |
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2295 const std::string& id = it->second; |
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2296 |
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2297 Json::Value item = Json::objectValue; |
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2298 item["Type"] = EnumerationToString(type); |
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2299 item["ID"] = id; |
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2300 item["Path"] = GetBasePath(type, id); |
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2301 |
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2302 result.append(item); |
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2303 } |
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2304 |
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2305 call.GetOutput().AnswerJson(result); |
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2306 } |
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2307 |
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2308 |
|
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2309 namespace |
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2310 { |
|
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2311 class FindVisitor : public ServerContext::ILookupVisitor |
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2312 { |
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2313 private: |
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2314 bool isComplete_; |
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2315 std::list<std::string> resources_; |
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2316 |
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2317 public: |
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2318 FindVisitor() : |
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2319 isComplete_(false) |
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2320 { |
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2321 } |
| 4205 | 2322 |
| 2323 virtual bool IsDicomAsJsonNeeded() const ORTHANC_OVERRIDE | |
|
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2324 { |
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2325 return false; // (*) |
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2326 } |
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2327 |
| 4205 | 2328 virtual void MarkAsComplete() ORTHANC_OVERRIDE |
|
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2329 { |
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2330 isComplete_ = true; // Unused information as of Orthanc 1.5.0 |
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2331 } |
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2332 |
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2333 virtual void Visit(const std::string& publicId, |
|
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2334 const std::string& instanceId /* unused */, |
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|
2335 const DicomMap& mainDicomTags /* unused */, |
| 4205 | 2336 const Json::Value* dicomAsJson /* unused (*) */) ORTHANC_OVERRIDE |
|
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2337 { |
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2338 resources_.push_back(publicId); |
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2339 } |
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2340 |
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2341 void Answer(RestApiOutput& output, |
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2342 ServerIndex& index, |
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2343 ResourceType level, |
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2344 bool expand) const |
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2345 { |
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2346 AnswerListOfResources(output, index, resources_, level, expand); |
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2347 } |
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2348 }; |
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2349 } |
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2350 |
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2351 |
| 1354 | 2352 static void Find(RestApiPostCall& call) |
| 2353 { | |
| 2998 | 2354 static const char* const KEY_CASE_SENSITIVE = "CaseSensitive"; |
| 2355 static const char* const KEY_EXPAND = "Expand"; | |
| 2356 static const char* const KEY_LEVEL = "Level"; | |
| 2357 static const char* const KEY_LIMIT = "Limit"; | |
| 2358 static const char* const KEY_QUERY = "Query"; | |
| 2359 static const char* const KEY_SINCE = "Since"; | |
| 2360 | |
| 4421 | 2361 if (call.IsDocumentation()) |
| 2362 { | |
| 2363 call.GetDocumentation() | |
| 2364 .SetTag("System") | |
| 2365 .SetSummary("Look for local resources") | |
| 2366 .SetDescription("This URI can be used to perform a search on the content of the local Orthanc server, " | |
| 2367 "in a way that is similar to querying remote DICOM modalities using C-FIND SCU: " | |
| 2368 "https://book.orthanc-server.com/users/rest.html#performing-finds-within-orthanc") | |
| 2369 .SetRequestField(KEY_CASE_SENSITIVE, RestApiCallDocumentation::Type_Boolean, | |
| 2370 "Enable case-sensitive search for PN value representations (defaults to configuration option `CaseSensitivePN`)", false) | |
| 2371 .SetRequestField(KEY_EXPAND, RestApiCallDocumentation::Type_Boolean, | |
| 2372 "Also retrieve the content of the matching resources, not only their Orthanc identifiers", false) | |
| 2373 .SetRequestField(KEY_LEVEL, RestApiCallDocumentation::Type_String, | |
| 2374 "Level of the query (`Patient`, `Study`, `Series` or `Instance`)", true) | |
| 2375 .SetRequestField(KEY_LIMIT, RestApiCallDocumentation::Type_Number, | |
| 2376 "Limit the number of reported resources", false) | |
| 2377 .SetRequestField(KEY_SINCE, RestApiCallDocumentation::Type_Number, | |
| 2378 "Show only the resources since the provided index (in conjunction with `Limit`)", false) | |
| 2379 .SetRequestField(KEY_QUERY, RestApiCallDocumentation::Type_JsonObject, | |
| 2380 "Associative array containing the filter on the values of the DICOM tags", true) | |
| 2381 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " | |
| 2382 "about the reported resources (if `Expand` argument is `true`)"); | |
| 2383 return; | |
| 2384 } | |
| 2385 | |
| 1358 | 2386 ServerContext& context = OrthancRestApi::GetContext(call); |
| 1354 | 2387 |
| 2388 Json::Value request; | |
|
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2389 if (!call.ParseJsonRequest(request) || |
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2390 request.type() != Json::objectValue) |
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2391 { |
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2392 throw OrthancException(ErrorCode_BadRequest, |
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2393 "The body must contain a JSON object"); |
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2394 } |
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2395 else if (!request.isMember(KEY_LEVEL) || |
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2396 request[KEY_LEVEL].type() != Json::stringValue) |
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2397 { |
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2398 throw OrthancException(ErrorCode_BadRequest, |
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2399 "Field \"" + std::string(KEY_LEVEL) + "\" is missing, or should be a string"); |
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2400 } |
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2401 else if (!request.isMember(KEY_QUERY) && |
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2402 request[KEY_QUERY].type() != Json::objectValue) |
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2403 { |
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2404 throw OrthancException(ErrorCode_BadRequest, |
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2405 "Field \"" + std::string(KEY_QUERY) + "\" is missing, or should be a JSON object"); |
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2406 } |
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2407 else if (request.isMember(KEY_CASE_SENSITIVE) && |
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diff
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|
2408 request[KEY_CASE_SENSITIVE].type() != Json::booleanValue) |
|
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refactoring /tools/find using LookupResource::IVisitor
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parents:
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|
2409 { |
|
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refactoring /tools/find using LookupResource::IVisitor
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parents:
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diff
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|
2410 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2411 "Field \"" + std::string(KEY_CASE_SENSITIVE) + "\" should be a Boolean"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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diff
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|
2412 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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diff
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|
2413 else if (request.isMember(KEY_LIMIT) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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diff
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|
2414 request[KEY_LIMIT].type() != Json::intValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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diff
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|
2415 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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parents:
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diff
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|
2416 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2417 "Field \"" + std::string(KEY_LIMIT) + "\" should be an integer"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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parents:
2998
diff
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|
2418 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2419 else if (request.isMember(KEY_SINCE) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2420 request[KEY_SINCE].type() != Json::intValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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parents:
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diff
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|
2421 { |
|
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refactoring /tools/find using LookupResource::IVisitor
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parents:
2998
diff
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|
2422 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2423 "Field \"" + std::string(KEY_SINCE) + "\" should be an integer"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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parents:
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|
2424 } |
|
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refactoring /tools/find using LookupResource::IVisitor
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parents:
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diff
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|
2425 else |
| 1354 | 2426 { |
| 2427 bool expand = false; | |
| 2998 | 2428 if (request.isMember(KEY_EXPAND)) |
| 1354 | 2429 { |
| 2998 | 2430 expand = request[KEY_EXPAND].asBool(); |
| 1354 | 2431 } |
| 2432 | |
|
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
2433 bool caseSensitive = false; |
| 2998 | 2434 if (request.isMember(KEY_CASE_SENSITIVE)) |
|
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
2435 { |
| 2998 | 2436 caseSensitive = request[KEY_CASE_SENSITIVE].asBool(); |
|
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
2437 } |
|
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2438 |
| 1758 | 2439 size_t limit = 0; |
| 2998 | 2440 if (request.isMember(KEY_LIMIT)) |
| 1758 | 2441 { |
| 2998 | 2442 int tmp = request[KEY_LIMIT].asInt(); |
| 1847 | 2443 if (tmp < 0) |
| 1758 | 2444 { |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2445 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2446 "Field \"" + std::string(KEY_LIMIT) + "\" should be a positive integer"); |
| 1758 | 2447 } |
| 1847 | 2448 |
| 2449 limit = static_cast<size_t>(tmp); | |
| 1758 | 2450 } |
| 2451 | |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2452 size_t since = 0; |
| 2998 | 2453 if (request.isMember(KEY_SINCE)) |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
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2281
diff
changeset
|
2454 { |
| 2998 | 2455 int tmp = request[KEY_SINCE].asInt(); |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2456 if (tmp < 0) |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2457 { |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2458 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
2459 "Field \"" + std::string(KEY_SINCE) + "\" should be a positive integer"); |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2460 } |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2461 |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2462 since = static_cast<size_t>(tmp); |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2463 } |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
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2281
diff
changeset
|
2464 |
|
3033
5da6d1063d8f
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
2465 ResourceType level = StringToResourceType(request[KEY_LEVEL].asCString()); |
| 1360 | 2466 |
|
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2467 DatabaseLookup query; |
| 1358 | 2468 |
| 2998 | 2469 Json::Value::Members members = request[KEY_QUERY].getMemberNames(); |
| 1354 | 2470 for (size_t i = 0; i < members.size(); i++) |
| 2471 { | |
| 2998 | 2472 if (request[KEY_QUERY][members[i]].type() != Json::stringValue) |
| 1354 | 2473 { |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
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|
2474 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
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2998
diff
changeset
|
2475 "Tag \"" + members[i] + "\" should be associated with a string"); |
| 1354 | 2476 } |
| 2477 | |
|
3163
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2478 const std::string value = request[KEY_QUERY][members[i]].asString(); |
|
cf91b6f22278
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2479 |
|
cf91b6f22278
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3094
diff
changeset
|
2480 if (!value.empty()) |
|
cf91b6f22278
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2481 { |
|
cf91b6f22278
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2482 // An empty string corresponds to an universal constraint, |
|
cf91b6f22278
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2483 // so we ignore it. This mimics the behavior of class |
|
cf91b6f22278
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2484 // "OrthancFindRequestHandler" |
|
cf91b6f22278
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2485 query.AddRestConstraint(FromDcmtkBridge::ParseTag(members[i]), |
|
cf91b6f22278
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2486 value, caseSensitive, true); |
|
cf91b6f22278
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2487 } |
|
1361
94ffb597d297
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1360
diff
changeset
|
2488 } |
| 2876 | 2489 |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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diff
changeset
|
2490 FindVisitor visitor; |
|
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
2491 context.Apply(visitor, query, level, since, limit); |
|
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
2492 visitor.Answer(call.GetOutput(), context.GetIndex(), level, expand); |
| 1354 | 2493 } |
| 2494 } | |
| 2495 | |
| 2496 | |
|
1140
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2497 template <enum ResourceType start, |
|
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2498 enum ResourceType end> |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2499 static void GetChildResources(RestApiGetCall& call) |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2500 { |
| 4415 | 2501 if (call.IsDocumentation()) |
| 2502 { | |
| 2503 const std::string children = GetResourceTypeText(end, true /* plural */, false /* lower case */); | |
| 2504 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
| 2505 call.GetDocumentation() | |
| 2506 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
| 2507 .SetSummary("Get child " + children) | |
| 2508 .SetDescription("Get detailed information about the child " + children + " of the DICOM " + | |
|
4416
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2509 resource + " whose Orthanc identifier is provided in the URL") |
| 4415 | 2510 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 2511 .AddAnswerType(MimeType_Json, "JSON array containing information about the child DICOM " + children) | |
| 2512 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + children, 5); | |
| 2513 return; | |
| 2514 } | |
| 2515 | |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
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diff
changeset
|
2516 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
94c5f6623b3a
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2517 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
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diff
changeset
|
2518 std::list<std::string> a, b, c; |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2519 a.push_back(call.GetUriComponent("id", "")); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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2520 |
|
94c5f6623b3a
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2521 ResourceType type = start; |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2522 while (type != end) |
|
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2523 { |
|
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|
2524 b.clear(); |
|
94c5f6623b3a
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2525 |
|
94c5f6623b3a
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changeset
|
2526 for (std::list<std::string>::const_iterator |
| 1303 | 2527 it = a.begin(); it != a.end(); ++it) |
|
1140
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2528 { |
|
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|
2529 index.GetChildren(c, *it); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
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diff
changeset
|
2530 b.splice(b.begin(), c); |
|
94c5f6623b3a
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2531 } |
|
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2532 |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
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1509
diff
changeset
|
2533 type = GetChildResourceType(type); |
|
1140
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2534 |
|
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|
2535 a.clear(); |
|
94c5f6623b3a
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|
2536 a.splice(a.begin(), b); |
|
94c5f6623b3a
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2537 } |
|
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2538 |
|
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changeset
|
2539 Json::Value result = Json::arrayValue; |
|
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URIs to get all the children of a given resource in a single REST call
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2540 |
|
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changeset
|
2541 for (std::list<std::string>::const_iterator |
| 1303 | 2542 it = a.begin(); it != a.end(); ++it) |
|
1140
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|
2543 { |
| 4554 | 2544 Json::Value resource; |
| 2545 if (OrthancRestApi::GetIndex(call).ExpandResource(resource, *it, end)) | |
|
1140
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changeset
|
2546 { |
| 4554 | 2547 result.append(resource); |
|
1140
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changeset
|
2548 } |
|
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changeset
|
2549 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2550 |
|
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diff
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|
2551 call.GetOutput().AnswerJson(result); |
|
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|
2552 } |
|
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diff
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|
2553 |
|
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diff
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|
2554 |
|
1166
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|
2555 static void GetChildInstancesTags(RestApiGetCall& call) |
|
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|
2556 { |
|
4416
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diff
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|
2557 if (call.IsDocumentation()) |
|
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diff
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|
2558 { |
|
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diff
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|
2559 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
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diff
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|
2560 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
0b27841950d5
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diff
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|
2561 call.GetDocumentation() |
|
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diff
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|
2562 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
0b27841950d5
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|
2563 .SetSummary("Get tags of instances") |
|
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|
2564 .SetDescription("Get the tags of all the child instances of the DICOM " + r + |
|
0b27841950d5
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diff
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|
2565 " whose Orthanc identifier is provided in the URL") |
|
0b27841950d5
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|
2566 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
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|
2567 .SetHttpGetArgument("ignore-length", RestApiCallDocumentation::Type_JsonListOfStrings, |
|
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|
2568 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
|
0b27841950d5
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2569 .AddAnswerType(MimeType_Json, "JSON object associating the Orthanc identifiers of the instances, with the values of their DICOM tags") |
|
0b27841950d5
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|
2570 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/instances-tags", 5); |
|
0b27841950d5
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|
2571 return; |
|
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|
2572 } |
|
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|
2573 |
|
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|
2574 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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|
2575 std::string publicId = call.GetUriComponent("id", ""); |
|
2622
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New option "?short" to list DICOM tags using their hexadecimal ID
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2576 DicomToJsonFormat format = GetDicomFormat(call); |
|
1166
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|
2577 |
|
2409
e4045b3c9772
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|
2578 std::set<DicomTag> ignoreTagLength; |
|
e4045b3c9772
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2579 ParseSetOfTags(ignoreTagLength, call, "ignore-length"); |
|
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|
2580 |
|
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2581 // Retrieve all the instances of this patient/study/series |
|
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2582 typedef std::list<std::string> Instances; |
|
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|
2583 Instances instances; |
|
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|
2584 |
|
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2585 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
|
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|
2586 |
|
1201
09aa7c126be9
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|
2587 Json::Value result = Json::objectValue; |
|
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|
2588 |
|
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|
2589 for (Instances::const_iterator it = instances.begin(); |
| 1303 | 2590 it != instances.end(); ++it) |
|
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|
2591 { |
|
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|
2592 Json::Value full; |
|
2409
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|
2593 context.ReadDicomAsJson(full, *it, ignoreTagLength); |
|
1166
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|
2594 |
|
2622
3603a2e14592
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diff
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|
2595 if (format != DicomToJsonFormat_Full) |
|
1166
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|
2596 { |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2597 Json::Value simplified; |
|
4055
9214e3a7b0a2
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2598 Toolbox::SimplifyDicomAsJson(simplified, full, format); |
|
1201
09aa7c126be9
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|
2599 result[*it] = simplified; |
|
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|
2600 } |
|
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|
2601 else |
|
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|
2602 { |
|
1201
09aa7c126be9
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|
2603 result[*it] = full; |
|
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|
2604 } |
|
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|
2605 } |
|
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|
2606 |
|
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|
2607 call.GetOutput().AnswerJson(result); |
|
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|
2608 } |
|
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|
2609 |
|
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|
2610 |
|
1140
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2611 |
|
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|
2612 template <enum ResourceType start, |
|
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|
2613 enum ResourceType end> |
|
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|
2614 static void GetParentResource(RestApiGetCall& call) |
|
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|
2615 { |
|
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|
2616 assert(start > end); |
|
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diff
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|
2617 |
| 4415 | 2618 if (call.IsDocumentation()) |
| 2619 { | |
| 2620 const std::string parent = GetResourceTypeText(end, false /* plural */, false /* lower case */); | |
| 2621 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
| 2622 call.GetDocumentation() | |
| 2623 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
| 2624 .SetSummary("Get parent " + parent) | |
| 2625 .SetDescription("Get detailed information about the parent " + parent + " of the DICOM " + | |
|
4416
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|
2626 resource + " whose Orthanc identifier is provided in the URL") |
| 4415 | 2627 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 2628 .AddAnswerType(MimeType_Json, "Information about the parent DICOM " + parent) | |
| 2629 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + parent, 10); | |
| 2630 return; | |
| 2631 } | |
| 2632 | |
|
1281
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|
2633 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
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|
2634 |
|
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|
2635 std::string current = call.GetUriComponent("id", ""); |
|
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2636 ResourceType currentType = start; |
|
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|
2637 while (currentType > end) |
|
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2638 { |
|
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|
2639 std::string parent; |
|
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|
2640 if (!index.LookupParent(parent, current)) |
|
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|
2641 { |
|
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2642 // Error that could happen if the resource gets deleted by |
|
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|
2643 // another concurrent call |
|
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2644 return; |
|
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2645 } |
|
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2646 |
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2647 current = parent; |
|
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2648 currentType = GetParentResourceType(currentType); |
|
1281
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2649 } |
|
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|
2650 |
|
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|
2651 assert(currentType == end); |
|
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|
2652 |
| 4554 | 2653 Json::Value resource; |
| 2654 if (OrthancRestApi::GetIndex(call).ExpandResource(resource, current, end)) | |
|
1281
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|
2655 { |
| 4554 | 2656 call.GetOutput().AnswerJson(resource); |
|
1281
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changeset
|
2657 } |
|
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changeset
|
2658 } |
|
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changeset
|
2659 |
|
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2660 |
|
1556
b8dc2f855a83
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changeset
|
2661 static void ExtractPdf(RestApiGetCall& call) |
|
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changeset
|
2662 { |
| 4407 | 2663 if (call.IsDocumentation()) |
| 2664 { | |
| 2665 call.GetDocumentation() | |
| 2666 .SetTag("Instances") | |
| 2667 .SetSummary("Get embedded PDF") | |
| 2668 .SetDescription("Get the PDF file that is embedded in one DICOM instance. " | |
| 2669 "If the DICOM instance doesn't contain the `EncapsulatedDocument` tag or if the " | |
| 2670 "`MIMETypeOfEncapsulatedDocument` tag doesn't correspond to the PDF type, a `404` HTTP error is raised.") | |
| 2671 .SetUriArgument("id", "Orthanc identifier of the instance interest") | |
| 2672 .AddAnswerType(MimeType_Pdf, "PDF file"); | |
| 2673 return; | |
| 2674 } | |
| 2675 | |
|
1556
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1555
diff
changeset
|
2676 const std::string id = call.GetUriComponent("id", ""); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2677 std::string pdf; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2678 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2679 |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2680 if (locker.GetDicom().ExtractPdf(pdf)) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2681 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2682 call.GetOutput().AnswerBuffer(pdf, MimeType_Pdf); |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2683 return; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2684 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2685 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2686 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2687 |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2688 static void OrderSlices(RestApiGetCall& call) |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2689 { |
| 4421 | 2690 if (call.IsDocumentation()) |
| 2691 { | |
| 2692 call.GetDocumentation() | |
| 2693 .SetDeprecated() | |
| 2694 .SetTag("Series") | |
| 2695 .SetSummary("Order the slices") | |
| 2696 .SetDescription("Sort the instances and frames (slices) of the DICOM series whose Orthanc identifier is provided in the URL. " | |
| 2697 "This URI is essentially used by the Orthanc Web viewer and by the Osimis Web viewer.") | |
| 2698 .SetUriArgument("id", "Orthanc identifier of the series of interest") | |
| 2699 .SetAnswerField("Dicom", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 2700 "Ordered list of paths to DICOM instances") | |
| 2701 .SetAnswerField("Slices", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 2702 "Ordered list of paths to frames. It is recommended to use this field, as it is also valid " | |
| 2703 "in the case of multiframe images.") | |
| 2704 .SetAnswerField("SlicesShort", RestApiCallDocumentation::Type_JsonListOfObjects, | |
| 2705 "Same information as the `Slices` field, but in a compact form") | |
| 2706 .SetAnswerField("Type", RestApiCallDocumentation::Type_String, | |
| 2707 "Can be `Volume` (for 3D volumes) or `Sequence` (notably for cine images)") | |
| 2708 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/series/1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0/ordered-slices", 10); | |
| 2709 return; | |
| 2710 } | |
| 2711 | |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2712 const std::string id = call.GetUriComponent("id", ""); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2713 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2714 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2715 SliceOrdering ordering(index, id); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2716 |
|
1703
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
2717 Json::Value result; |
|
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
2718 ordering.Format(result); |
|
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
2719 call.GetOutput().AnswerJson(result); |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2720 } |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2721 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2722 |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2723 static void GetInstanceHeader(RestApiGetCall& call) |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2724 { |
| 4404 | 2725 if (call.IsDocumentation()) |
| 2726 { | |
| 2727 call.GetDocumentation() | |
| 2728 .SetTag("Instances") | |
| 2729 .SetSummary("Get DICOM meta-header") | |
| 2730 .SetDescription("Get the DICOM tags in the meta-header of the DICOM instance. By default, the `full` format is used, which " | |
| 2731 "combines hexadecimal tags with human-readable description.") | |
| 2732 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 2733 .SetHttpGetArgument("simplify", RestApiCallDocumentation::Type_String, | |
| 2734 "If present, report the DICOM tags in human-readable format", false) | |
| 2735 .SetHttpGetArgument("short", RestApiCallDocumentation::Type_String, | |
| 2736 "If present, report the DICOM tags indexed in hexadecimal format", false) | |
| 2737 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") | |
| 2738 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/header", true); | |
| 2739 return; | |
| 2740 } | |
| 2741 | |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2742 ServerContext& context = OrthancRestApi::GetContext(call); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2743 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2744 std::string publicId = call.GetUriComponent("id", ""); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2745 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2746 std::string dicomContent; |
| 2124 | 2747 context.ReadDicom(dicomContent, publicId); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2748 |
|
2007
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
2749 // TODO Consider using "DicomMap::ParseDicomMetaInformation()" to |
|
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
2750 // speed up things here |
|
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
2751 |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2752 ParsedDicomFile dicom(dicomContent); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2753 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2754 Json::Value header; |
|
4140
0ddc5297a8ab
centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4139
diff
changeset
|
2755 OrthancConfiguration::DefaultDicomHeaderToJson(header, dicom); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2756 |
|
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
2757 AnswerDicomAsJson(call, header); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2758 } |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2759 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2760 |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2761 static void InvalidateTags(RestApiPostCall& call) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2762 { |
| 4420 | 2763 if (call.IsDocumentation()) |
| 2764 { | |
| 2765 call.GetDocumentation() | |
| 2766 .SetTag("System") | |
| 2767 .SetSummary("Invalidate DICOM-as-JSON summaries") | |
| 2768 .SetDescription("Remove all the attachments of the type \"DICOM-as-JSON\" that are associated will all the " | |
| 2769 "DICOM instances stored in Orthanc. These summaries will be automatically re-created on the next access. " | |
| 2770 "This is notably useful after changes to the `Dictionary` configuration option. " | |
| 2771 "https://book.orthanc-server.com/faq/orthanc-storage.html#storage-area"); | |
| 2772 return; | |
| 2773 } | |
| 2774 | |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2775 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2776 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2777 // Loop over the instances, grouping them by parent studies so as |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2778 // to avoid large memory consumption |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2779 std::list<std::string> studies; |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2780 index.GetAllUuids(studies, ResourceType_Study); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2781 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2782 for (std::list<std::string>::const_iterator |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2783 study = studies.begin(); study != studies.end(); ++study) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2784 { |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2785 std::list<std::string> instances; |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2786 index.GetChildInstances(instances, *study); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2787 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2788 for (std::list<std::string>::const_iterator |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2789 instance = instances.begin(); instance != instances.end(); ++instance) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2790 { |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2791 index.DeleteAttachment(*instance, FileContentType_DicomAsJson); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2792 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2793 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2794 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2795 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2796 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2797 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2798 |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
2799 template <enum ResourceType type> |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
2800 static void ReconstructResource(RestApiPostCall& call) |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
2801 { |
| 4420 | 2802 if (call.IsDocumentation()) |
| 2803 { | |
| 2804 const std::string resource = GetResourceTypeText(type, false /* plural */, false /* lower case */); | |
| 2805 call.GetDocumentation() | |
| 2806 .SetTag(GetResourceTypeText(type, true /* plural */, true /* upper case */)) | |
| 2807 .SetSummary("Reconstruct tags of " + resource) | |
| 2808 .SetDescription("Reconstruct the main DICOM tags of the " + resource + " whose Orthanc identifier is provided " | |
| 2809 "in the URL. This is useful if child studies/series/instances have inconsistent values for " | |
| 2810 "higher-level tags, in order to force Orthanc to use the value from the resource of interest. " | |
| 2811 "Beware that this is a time-consuming operation, as all the children DICOM instances will be " | |
| 2812 "parsed again, and the Orthanc index will be updated accordingly.") | |
| 2813 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); | |
| 2814 return; | |
| 2815 } | |
| 2816 | |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
2817 ServerContext& context = OrthancRestApi::GetContext(call); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
2818 ServerToolbox::ReconstructResource(context, call.GetUriComponent("id", "")); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2819 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
2820 } |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
2821 |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
2822 |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
2823 static void ReconstructAllResources(RestApiPostCall& call) |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
2824 { |
| 4420 | 2825 if (call.IsDocumentation()) |
| 2826 { | |
| 2827 call.GetDocumentation() | |
| 2828 .SetTag("System") | |
| 2829 .SetSummary("Reconstruct all the index") | |
| 2830 .SetDescription("Reconstruct the index of all the tags of all the DICOM instances that are stored in Orthanc. " | |
| 2831 "This is notably useful after the deletion of resources whose children resources have inconsistent " | |
| 2832 "values with their sibling resources. Beware that this is a highly time-consuming operation, " | |
| 2833 "as all the DICOM instances will be parsed again, and as all the Orthanc index will be regenerated."); | |
| 2834 return; | |
| 2835 } | |
| 2836 | |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
2837 ServerContext& context = OrthancRestApi::GetContext(call); |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
2838 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
2839 std::list<std::string> studies; |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
2840 context.GetIndex().GetAllUuids(studies, ResourceType_Study); |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
2841 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
2842 for (std::list<std::string>::const_iterator |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
2843 study = studies.begin(); study != studies.end(); ++study) |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
2844 { |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
2845 ServerToolbox::ReconstructResource(context, *study); |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
2846 } |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
2847 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2848 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
2849 } |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
2850 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
2851 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2852 void OrthancRestApi::RegisterResources() |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2853 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2854 Register("/instances", ListResources<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2855 Register("/patients", ListResources<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2856 Register("/series", ListResources<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2857 Register("/studies", ListResources<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2858 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2859 Register("/instances/{id}", DeleteSingleResource<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2860 Register("/instances/{id}", GetSingleResource<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2861 Register("/patients/{id}", DeleteSingleResource<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2862 Register("/patients/{id}", GetSingleResource<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2863 Register("/series/{id}", DeleteSingleResource<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2864 Register("/series/{id}", GetSingleResource<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2865 Register("/studies/{id}", DeleteSingleResource<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2866 Register("/studies/{id}", GetSingleResource<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2867 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2868 Register("/instances/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2869 Register("/patients/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2870 Register("/studies/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2871 Register("/series/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2872 |
|
964
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
2873 Register("/patients/{id}/shared-tags", GetSharedTags); |
|
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
2874 Register("/series/{id}/shared-tags", GetSharedTags); |
|
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
2875 Register("/studies/{id}/shared-tags", GetSharedTags); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2876 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2877 Register("/instances/{id}/module", GetModule<ResourceType_Instance, DicomModule_Instance>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2878 Register("/patients/{id}/module", GetModule<ResourceType_Patient, DicomModule_Patient>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2879 Register("/series/{id}/module", GetModule<ResourceType_Series, DicomModule_Series>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2880 Register("/studies/{id}/module", GetModule<ResourceType_Study, DicomModule_Study>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2881 Register("/studies/{id}/module-patient", GetModule<ResourceType_Study, DicomModule_Patient>); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2882 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2883 Register("/instances/{id}/file", GetInstanceFile); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2884 Register("/instances/{id}/export", ExportInstanceFile); |
|
964
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
2885 Register("/instances/{id}/tags", GetInstanceTagsBis); |
|
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
2886 Register("/instances/{id}/simplified-tags", GetInstanceTags<DicomToJsonFormat_Human>); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2887 Register("/instances/{id}/frames", ListFrames); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2888 |
|
4424
83371ccdfe80
openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4422
diff
changeset
|
2889 Register("/instances/{id}/frames/{frame}", RestApi::AutoListChildren); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2890 Register("/instances/{id}/frames/{frame}/preview", GetImage<ImageExtractionMode_Preview>); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
2891 Register("/instances/{id}/frames/{frame}/rendered", GetRenderedFrame); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2892 Register("/instances/{id}/frames/{frame}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2893 Register("/instances/{id}/frames/{frame}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2894 Register("/instances/{id}/frames/{frame}/image-int16", GetImage<ImageExtractionMode_Int16>); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2895 Register("/instances/{id}/frames/{frame}/matlab", GetMatlabImage); |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
2896 Register("/instances/{id}/frames/{frame}/raw", GetRawFrame<false>); |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
2897 Register("/instances/{id}/frames/{frame}/raw.gz", GetRawFrame<true>); |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2898 Register("/instances/{id}/pdf", ExtractPdf); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2899 Register("/instances/{id}/preview", GetImage<ImageExtractionMode_Preview>); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
2900 Register("/instances/{id}/rendered", GetRenderedFrame); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2901 Register("/instances/{id}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2902 Register("/instances/{id}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2903 Register("/instances/{id}/image-int16", GetImage<ImageExtractionMode_Int16>); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2904 Register("/instances/{id}/matlab", GetMatlabImage); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2905 Register("/instances/{id}/header", GetInstanceHeader); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2906 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2907 Register("/patients/{id}/protected", IsProtectedPatient); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2908 Register("/patients/{id}/protected", SetPatientProtection); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2909 |
| 4409 | 2910 std::vector<std::string> resourceTypes; |
| 2911 resourceTypes.push_back("patients"); | |
| 2912 resourceTypes.push_back("studies"); | |
| 2913 resourceTypes.push_back("series"); | |
| 2914 resourceTypes.push_back("instances"); | |
| 2915 | |
| 2916 for (size_t i = 0; i < resourceTypes.size(); i++) | |
| 2917 { | |
| 2918 Register("/" + resourceTypes[i] + "/{id}/metadata", ListMetadata); | |
| 2919 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", DeleteMetadata); | |
| 2920 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", GetMetadata); | |
| 2921 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", SetMetadata); | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2922 |
| 4409 | 2923 Register("/" + resourceTypes[i] + "/{id}/attachments", ListAttachments); |
| 2924 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", DeleteAttachment); | |
| 2925 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", GetAttachmentOperations); | |
| 2926 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", UploadAttachment); | |
| 2927 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compress", ChangeAttachmentCompression<CompressionType_ZlibWithSize>); | |
| 2928 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-data", GetAttachmentData<0>); | |
| 2929 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-md5", GetAttachmentCompressedMD5); | |
| 2930 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-size", GetAttachmentCompressedSize); | |
| 2931 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/data", GetAttachmentData<1>); | |
| 2932 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/is-compressed", IsAttachmentCompressed); | |
| 2933 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/md5", GetAttachmentMD5); | |
| 2934 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/size", GetAttachmentSize); | |
| 2935 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/uncompress", ChangeAttachmentCompression<CompressionType_None>); | |
| 2936 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/verify-md5", VerifyAttachment); | |
| 2937 } | |
| 782 | 2938 |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
2939 Register("/tools/invalidate-tags", InvalidateTags); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
2940 Register("/tools/lookup", Lookup); |
| 1354 | 2941 Register("/tools/find", Find); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
2942 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2943 Register("/patients/{id}/studies", GetChildResources<ResourceType_Patient, ResourceType_Study>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2944 Register("/patients/{id}/series", GetChildResources<ResourceType_Patient, ResourceType_Series>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2945 Register("/patients/{id}/instances", GetChildResources<ResourceType_Patient, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2946 Register("/studies/{id}/series", GetChildResources<ResourceType_Study, ResourceType_Series>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2947 Register("/studies/{id}/instances", GetChildResources<ResourceType_Study, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2948 Register("/series/{id}/instances", GetChildResources<ResourceType_Series, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2949 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2950 Register("/studies/{id}/patient", GetParentResource<ResourceType_Study, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2951 Register("/series/{id}/patient", GetParentResource<ResourceType_Series, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2952 Register("/series/{id}/study", GetParentResource<ResourceType_Series, ResourceType_Study>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2953 Register("/instances/{id}/patient", GetParentResource<ResourceType_Instance, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2954 Register("/instances/{id}/study", GetParentResource<ResourceType_Instance, ResourceType_Study>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2955 Register("/instances/{id}/series", GetParentResource<ResourceType_Instance, ResourceType_Series>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2956 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
2957 Register("/patients/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
2958 Register("/studies/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
2959 Register("/series/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
2960 |
| 782 | 2961 Register("/instances/{id}/content/*", GetRawContent); |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2962 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2963 Register("/series/{id}/ordered-slices", OrderSlices); |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
2964 |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
2965 Register("/patients/{id}/reconstruct", ReconstructResource<ResourceType_Patient>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
2966 Register("/studies/{id}/reconstruct", ReconstructResource<ResourceType_Study>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
2967 Register("/series/{id}/reconstruct", ReconstructResource<ResourceType_Series>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
2968 Register("/instances/{id}/reconstruct", ReconstructResource<ResourceType_Instance>); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
2969 Register("/tools/reconstruct", ReconstructAllResources); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2970 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2971 } |