Mercurial > hg > orthanc

annotate UnitTestsSources/ImageProcessingTests.cpp @ 2314:c54c9523adf8 issue-46-anonymization

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
add basic profile
author Sebastien Jodogne <s.jodogne@gmail.com>
date Wed, 12 Jul 2017 22:09:27 +0200
parents a3a65de1840f
children 878b59270859
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
853
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1 /**
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
2 * Orthanc - A Lightweight, RESTful DICOM Store
1900
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1612
diff changeset
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
1288
6e7e5ed91c2d upgrade to year 2015
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1207
diff changeset
4 * Department, University Hospital of Liege, Belgium
2244
a3a65de1840f shared copyright with osimis
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2007
diff changeset
5 * Copyright (C) 2017 Osimis, Belgium
853
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
6 *
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
7 * This program is free software: you can redistribute it and/or
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
8 * modify it under the terms of the GNU General Public License as
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
9 * published by the Free Software Foundation, either version 3 of the
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
10 * License, or (at your option) any later version.
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
11 *
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
12 * In addition, as a special exception, the copyright holders of this
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
13 * program give permission to link the code of its release with the
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
14 * OpenSSL project's "OpenSSL" library (or with modified versions of it
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
15 * that use the same license as the "OpenSSL" library), and distribute
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
16 * the linked executables. You must obey the GNU General Public License
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
17 * in all respects for all of the code used other than "OpenSSL". If you
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
18 * modify file(s) with this exception, you may extend this exception to
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
19 * your version of the file(s), but you are not obligated to do so. If
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
20 * you do not wish to do so, delete this exception statement from your
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
21 * version. If you delete this exception statement from all source files
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
22 * in the program, then also delete it here.
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
23 *
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
24 * This program is distributed in the hope that it will be useful, but
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
25 * WITHOUT ANY WARRANTY; without even the implied warranty of
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
27 * General Public License for more details.
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
28 *
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
29 * You should have received a copy of the GNU General Public License
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
30 * along with this program. If not, see <http://www.gnu.org/licenses/>.
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
31 **/
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
32
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
33
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
34 #include "PrecompiledHeadersUnitTests.h"
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
35 #include "gtest/gtest.h"
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
36
855
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 853
diff changeset
37 #include "../Core/DicomFormat/DicomImageInformation.h"
1612
96582230ddcb Core/ImageFormats folder renamed as Core/Images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
38 #include "../Core/Images/ImageBuffer.h"
96582230ddcb Core/ImageFormats folder renamed as Core/Images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
39 #include "../Core/Images/ImageProcessing.h"
853
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
40
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
41 using namespace Orthanc;
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
42
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
43
855
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 853
diff changeset
44 TEST(DicomImageInformation, ExtractPixelFormat1)
853
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
45 {
855
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 853
diff changeset
46 // Cardiac/MR*
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 853
diff changeset
47 DicomMap m;
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1905
diff changeset
48 m.SetValue(DICOM_TAG_ROWS, "24", false);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1905
diff changeset
49 m.SetValue(DICOM_TAG_COLUMNS, "16", false);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1905
diff changeset
50 m.SetValue(DICOM_TAG_BITS_ALLOCATED, "16", false);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1905
diff changeset
51 m.SetValue(DICOM_TAG_SAMPLES_PER_PIXEL, "1", false);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1905
diff changeset
52 m.SetValue(DICOM_TAG_BITS_STORED, "12", false);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1905
diff changeset
53 m.SetValue(DICOM_TAG_HIGH_BIT, "11", false);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1905
diff changeset
54 m.SetValue(DICOM_TAG_PIXEL_REPRESENTATION, "0", false);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1905
diff changeset
55 m.SetValue(DICOM_TAG_PHOTOMETRIC_INTERPRETATION, "MONOCHROME2", false);
855
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 853
diff changeset
56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 853
diff changeset
57 DicomImageInformation info(m);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 853
diff changeset
58 PixelFormat format;
1905
8b1baa2315b8 Huge speedup if decoding the family of JPEG transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
59 ASSERT_TRUE(info.ExtractPixelFormat(format, false));
855
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 853
diff changeset
60 ASSERT_EQ(PixelFormat_Grayscale16, format);
853
839be3022203 DicomImageInformation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
61 }
855
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 853
diff changeset
62
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 853
diff changeset
63
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 853
diff changeset
64 TEST(DicomImageInformation, ExtractPixelFormat2)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 853
diff changeset
65 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 853
diff changeset
66 // Delphine CT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 853
diff changeset
67 DicomMap m;
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1905
diff changeset
68 m.SetValue(DICOM_TAG_ROWS, "24", false);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1905
diff changeset
69 m.SetValue(DICOM_TAG_COLUMNS, "16", false);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1905
diff changeset
70 m.SetValue(DICOM_TAG_BITS_ALLOCATED, "16", false);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1905
diff changeset
71 m.SetValue(DICOM_TAG_SAMPLES_PER_PIXEL, "1", false);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1905
diff changeset
72 m.SetValue(DICOM_TAG_BITS_STORED, "16", false);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1905
diff changeset
73 m.SetValue(DICOM_TAG_HIGH_BIT, "15", false);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1905
diff changeset
74 m.SetValue(DICOM_TAG_PIXEL_REPRESENTATION, "1", false);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1905
diff changeset
75 m.SetValue(DICOM_TAG_PHOTOMETRIC_INTERPRETATION, "MONOCHROME2", false);
855
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 853
diff changeset
76
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 853
diff changeset
77 DicomImageInformation info(m);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 853
diff changeset
78 PixelFormat format;
1905
8b1baa2315b8 Huge speedup if decoding the family of JPEG transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
79 ASSERT_TRUE(info.ExtractPixelFormat(format, false));
855
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 853
diff changeset
80 ASSERT_EQ(PixelFormat_SignedGrayscale16, format);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 853
diff changeset
81 }