Mercurial > hg > orthanc
annotate OrthancServer/ServerIndex.cpp @ 1715:c3baf74e443f db-changes
simplify
author | Sebastien Jodogne <s.jodogne@gmail.com> |
---|---|
date | Fri, 16 Oct 2015 18:34:53 +0200 |
parents | 5ebd6cbb3da8 |
children | 2ca7888f8600 |
rev | line source |
---|---|
0 | 1 /** |
62 | 2 * Orthanc - A Lightweight, RESTful DICOM Store |
1288
6e7e5ed91c2d
upgrade to year 2015
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1286
diff
changeset
|
3 * Copyright (C) 2012-2015 Sebastien Jodogne, Medical Physics |
6e7e5ed91c2d
upgrade to year 2015
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1286
diff
changeset
|
4 * Department, University Hospital of Liege, Belgium |
0 | 5 * |
6 * This program is free software: you can redistribute it and/or | |
7 * modify it under the terms of the GNU General Public License as | |
8 * published by the Free Software Foundation, either version 3 of the | |
9 * License, or (at your option) any later version. | |
136 | 10 * |
11 * In addition, as a special exception, the copyright holders of this | |
12 * program give permission to link the code of its release with the | |
13 * OpenSSL project's "OpenSSL" library (or with modified versions of it | |
14 * that use the same license as the "OpenSSL" library), and distribute | |
15 * the linked executables. You must obey the GNU General Public License | |
16 * in all respects for all of the code used other than "OpenSSL". If you | |
17 * modify file(s) with this exception, you may extend this exception to | |
18 * your version of the file(s), but you are not obligated to do so. If | |
19 * you do not wish to do so, delete this exception statement from your | |
20 * version. If you delete this exception statement from all source files | |
21 * in the program, then also delete it here. | |
0 | 22 * |
23 * This program is distributed in the hope that it will be useful, but | |
24 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
26 * General Public License for more details. | |
27 * | |
28 * You should have received a copy of the GNU General Public License | |
29 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
30 **/ | |
31 | |
32 | |
831
84513f2ee1f3
pch for unit tests and server
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
824
diff
changeset
|
33 #include "PrecompiledHeadersServer.h" |
0 | 34 #include "ServerIndex.h" |
35 | |
6 | 36 #ifndef NOMINMAX |
2 | 37 #define NOMINMAX |
6 | 38 #endif |
39 | |
1198 | 40 #include "ServerIndexChange.h" |
8 | 41 #include "EmbeddedResources.h" |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
42 #include "OrthancInitialization.h" |
1668
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
43 #include "ServerToolbox.h" |
0 | 44 #include "../Core/Toolbox.h" |
1486
f967bdf8534e
refactoring to Logging.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1453
diff
changeset
|
45 #include "../Core/Logging.h" |
0 | 46 #include "../Core/Uuid.h" |
47 #include "../Core/DicomFormat/DicomArray.h" | |
1486
f967bdf8534e
refactoring to Logging.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1453
diff
changeset
|
48 |
0 | 49 #include "FromDcmtkBridge.h" |
226
8a26a8e85edf
refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
224
diff
changeset
|
50 #include "ServerContext.h" |
0 | 51 |
52 #include <boost/lexical_cast.hpp> | |
53 #include <stdio.h> | |
54 | |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
55 static const uint64_t MEGA_BYTES = 1024 * 1024; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
56 |
62 | 57 namespace Orthanc |
0 | 58 { |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
59 class ServerIndex::Listener : public IDatabaseListener |
0 | 60 { |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
61 private: |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
62 struct FileToRemove |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
63 { |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
64 private: |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
65 std::string uuid_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
66 FileContentType type_; |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
67 |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
68 public: |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
69 FileToRemove(const FileInfo& info) : uuid_(info.GetUuid()), |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
70 type_(info.GetContentType()) |
1191
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
71 { |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
72 } |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
73 |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
74 const std::string& GetUuid() const |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
75 { |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
76 return uuid_; |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
77 } |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
78 |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
79 FileContentType GetContentType() const |
264
5b8e8b74bc8b
remove files only after the sqlite transaction has succeeded
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
240
diff
changeset
|
80 { |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
81 return type_; |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
82 } |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
83 }; |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
84 |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
85 ServerContext& context_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
86 bool hasRemainingLevel_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
87 ResourceType remainingType_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
88 std::string remainingPublicId_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
89 std::list<FileToRemove> pendingFilesToRemove_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
90 std::list<ServerIndexChange> pendingChanges_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
91 uint64_t sizeOfFilesToRemove_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
92 bool insideTransaction_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
93 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
94 void Reset() |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
95 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
96 sizeOfFilesToRemove_ = 0; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
97 hasRemainingLevel_ = false; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
98 pendingFilesToRemove_.clear(); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
99 pendingChanges_.clear(); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
100 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
101 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
102 public: |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
103 Listener(ServerContext& context) : context_(context), |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
104 insideTransaction_(false) |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
105 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
106 Reset(); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
107 assert(ResourceType_Patient < ResourceType_Study && |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
108 ResourceType_Study < ResourceType_Series && |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
109 ResourceType_Series < ResourceType_Instance); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
110 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
111 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
112 void StartTransaction() |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
113 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
114 Reset(); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
115 insideTransaction_ = true; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
116 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
117 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
118 void EndTransaction() |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
119 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
120 insideTransaction_ = false; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
121 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
122 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
123 uint64_t GetSizeOfFilesToRemove() |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
124 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
125 return sizeOfFilesToRemove_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
126 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
127 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
128 void CommitFilesToRemove() |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
129 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
130 for (std::list<FileToRemove>::const_iterator |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
131 it = pendingFilesToRemove_.begin(); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
132 it != pendingFilesToRemove_.end(); ++it) |
1189
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
133 { |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
134 context_.RemoveFile(it->GetUuid(), it->GetContentType()); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
135 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
136 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
137 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
138 void CommitChanges() |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
139 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
140 for (std::list<ServerIndexChange>::const_iterator |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
141 it = pendingChanges_.begin(); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
142 it != pendingChanges_.end(); ++it) |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
143 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
144 context_.SignalChange(*it); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
145 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
146 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
147 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
148 virtual void SignalRemainingAncestor(ResourceType parentType, |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
149 const std::string& publicId) |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
150 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
151 VLOG(1) << "Remaining ancestor \"" << publicId << "\" (" << parentType << ")"; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
152 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
153 if (hasRemainingLevel_) |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
154 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
155 if (parentType < remainingType_) |
1189
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
156 { |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
157 remainingType_ = parentType; |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
158 remainingPublicId_ = publicId; |
1191
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
159 } |
1158 | 160 } |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
161 else |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
162 { |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
163 hasRemainingLevel_ = true; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
164 remainingType_ = parentType; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
165 remainingPublicId_ = publicId; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
166 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
167 } |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
168 |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
169 virtual void SignalFileDeleted(const FileInfo& info) |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
170 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
171 assert(Toolbox::IsUuid(info.GetUuid())); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
172 pendingFilesToRemove_.push_back(FileToRemove(info)); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
173 sizeOfFilesToRemove_ += info.GetCompressedSize(); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
174 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
175 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
176 virtual void SignalChange(const ServerIndexChange& change) |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
177 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
178 VLOG(1) << "Change related to resource " << change.GetPublicId() << " of type " |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
179 << EnumerationToString(change.GetResourceType()) << ": " |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
180 << EnumerationToString(change.GetChangeType()); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
181 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
182 if (insideTransaction_) |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
183 { |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
184 pendingChanges_.push_back(change); |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
185 } |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
186 else |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
187 { |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
188 context_.SignalChange(change); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
189 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
190 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
191 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
192 bool HasRemainingLevel() const |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
193 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
194 return hasRemainingLevel_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
195 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
196 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
197 ResourceType GetRemainingType() const |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
198 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
199 assert(HasRemainingLevel()); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
200 return remainingType_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
201 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
202 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
203 const std::string& GetRemainingPublicId() const |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
204 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
205 assert(HasRemainingLevel()); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
206 return remainingPublicId_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
207 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
208 }; |
0 | 209 |
210 | |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
211 class ServerIndex::Transaction |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
212 { |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
213 private: |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
214 ServerIndex& index_; |
1235 | 215 std::auto_ptr<SQLite::ITransaction> transaction_; |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
216 bool isCommitted_; |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
217 |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
218 public: |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
219 Transaction(ServerIndex& index) : |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
220 index_(index), |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
221 isCommitted_(false) |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
222 { |
1247 | 223 transaction_.reset(index_.db_.StartTransaction()); |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
224 transaction_->Begin(); |
1191
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
225 |
1270 | 226 assert(index_.currentStorageSize_ == index_.db_.GetTotalCompressedSize()); |
227 | |
1191
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
228 index_.listener_->StartTransaction(); |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
229 } |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
230 |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
231 ~Transaction() |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
232 { |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
233 index_.listener_->EndTransaction(); |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
234 |
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
235 if (!isCommitted_) |
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
236 { |
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
237 transaction_->Rollback(); |
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
238 } |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
239 } |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
240 |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
241 void Commit(uint64_t sizeOfAddedFiles) |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
242 { |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
243 if (!isCommitted_) |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
244 { |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
245 transaction_->Commit(); |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
246 |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
247 // We can remove the files once the SQLite transaction has |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
248 // been successfully committed. Some files might have to be |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
249 // deleted because of recycling. |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
250 index_.listener_->CommitFilesToRemove(); |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
251 |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
252 index_.currentStorageSize_ += sizeOfAddedFiles; |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
253 |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
254 assert(index_.currentStorageSize_ >= index_.listener_->GetSizeOfFilesToRemove()); |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
255 index_.currentStorageSize_ -= index_.listener_->GetSizeOfFilesToRemove(); |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
256 |
1189
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
257 // Send all the pending changes to the Orthanc plugins |
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
258 index_.listener_->CommitChanges(); |
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
259 |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
260 isCommitted_ = true; |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
261 } |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
262 } |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
263 }; |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
264 |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
265 |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
266 class ServerIndex::UnstableResourcePayload |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
267 { |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
268 private: |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
269 ResourceType type_; |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
270 std::string publicId_; |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
271 boost::posix_time::ptime time_; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
272 |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
273 public: |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
274 UnstableResourcePayload() : type_(ResourceType_Instance) |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
275 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
276 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
277 |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
278 UnstableResourcePayload(Orthanc::ResourceType type, |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
279 const std::string& publicId) : |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
280 type_(type), |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
281 publicId_(publicId) |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
282 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
283 time_ = boost::posix_time::second_clock::local_time(); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
284 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
285 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
286 unsigned int GetAge() const |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
287 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
288 return (boost::posix_time::second_clock::local_time() - time_).total_seconds(); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
289 } |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
290 |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
291 ResourceType GetResourceType() const |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
292 { |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
293 return type_; |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
294 } |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
295 |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
296 const std::string& GetPublicId() const |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
297 { |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
298 return publicId_; |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
299 } |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
300 }; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
301 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
302 |
212 | 303 bool ServerIndex::DeleteResource(Json::Value& target, |
0 | 304 const std::string& uuid, |
202 | 305 ResourceType expectedType) |
0 | 306 { |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
307 boost::mutex::scoped_lock lock(mutex_); |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
308 |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
309 Transaction t(*this); |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
310 |
202 | 311 int64_t id; |
312 ResourceType type; | |
1294 | 313 if (!db_.LookupResource(id, type, uuid) || |
202 | 314 expectedType != type) |
0 | 315 { |
316 return false; | |
317 } | |
202 | 318 |
1247 | 319 db_.DeleteResource(id); |
0 | 320 |
202 | 321 if (listener_->HasRemainingLevel()) |
0 | 322 { |
202 | 323 ResourceType type = listener_->GetRemainingType(); |
324 const std::string& uuid = listener_->GetRemainingPublicId(); | |
0 | 325 |
326 target["RemainingAncestor"] = Json::Value(Json::objectValue); | |
204 | 327 target["RemainingAncestor"]["Path"] = GetBasePath(type, uuid); |
434
ccf3a0a43dac
EnumerationDictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
328 target["RemainingAncestor"]["Type"] = EnumerationToString(type); |
0 | 329 target["RemainingAncestor"]["ID"] = uuid; |
330 } | |
331 else | |
332 { | |
333 target["RemainingAncestor"] = Json::nullValue; | |
334 } | |
335 | |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
336 t.Commit(0); |
264
5b8e8b74bc8b
remove files only after the sqlite transaction has succeeded
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
240
diff
changeset
|
337 |
0 | 338 return true; |
339 } | |
340 | |
341 | |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
342 void ServerIndex::FlushThread(ServerIndex* that) |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
343 { |
1102
ce6386b37afd
avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1006
diff
changeset
|
344 // By default, wait for 10 seconds before flushing |
ce6386b37afd
avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1006
diff
changeset
|
345 unsigned int sleep = 10; |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
346 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
347 try |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
348 { |
744 | 349 boost::mutex::scoped_lock lock(that->mutex_); |
1239 | 350 std::string sleepString; |
1102
ce6386b37afd
avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1006
diff
changeset
|
351 |
1247 | 352 if (that->db_.LookupGlobalProperty(sleepString, GlobalProperty_FlushSleep) && |
1239 | 353 Toolbox::IsInteger(sleepString)) |
1102
ce6386b37afd
avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1006
diff
changeset
|
354 { |
ce6386b37afd
avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1006
diff
changeset
|
355 sleep = boost::lexical_cast<unsigned int>(sleepString); |
ce6386b37afd
avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1006
diff
changeset
|
356 } |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
357 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
358 catch (boost::bad_lexical_cast&) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
359 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
360 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
361 |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
362 LOG(INFO) << "Starting the database flushing thread (sleep = " << sleep << ")"; |
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
363 |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
364 unsigned int count = 0; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
365 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
366 while (!that->done_) |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
367 { |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
368 boost::this_thread::sleep(boost::posix_time::seconds(1)); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
369 count++; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
370 if (count < sleep) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
371 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
372 continue; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
373 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
374 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
375 boost::mutex::scoped_lock lock(that->mutex_); |
1247 | 376 that->db_.FlushToDisk(); |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
377 count = 0; |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
378 } |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
379 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
380 LOG(INFO) << "Stopping the database flushing thread"; |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
381 } |
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
382 |
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
383 |
1247 | 384 static void ComputeExpectedNumberOfInstances(IDatabaseWrapper& db, |
433 | 385 int64_t series, |
386 const DicomMap& dicomSummary) | |
387 { | |
388 try | |
389 { | |
656 | 390 const DicomValue* value; |
391 const DicomValue* value2; | |
392 | |
433 | 393 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_IMAGES_IN_ACQUISITION)) != NULL && |
394 (value2 = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_TEMPORAL_POSITIONS)) != NULL) | |
395 { | |
396 // Patch for series with temporal positions thanks to Will Ryder | |
397 int64_t imagesInAcquisition = boost::lexical_cast<int64_t>(value->AsString()); | |
398 int64_t countTemporalPositions = boost::lexical_cast<int64_t>(value2->AsString()); | |
399 std::string expected = boost::lexical_cast<std::string>(imagesInAcquisition * countTemporalPositions); | |
400 db.SetMetadata(series, MetadataType_Series_ExpectedNumberOfInstances, expected); | |
401 } | |
402 | |
403 else if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_SLICES)) != NULL && | |
404 (value2 = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_TIME_SLICES)) != NULL) | |
405 { | |
406 // Support of Cardio-PET images | |
407 int64_t numberOfSlices = boost::lexical_cast<int64_t>(value->AsString()); | |
408 int64_t numberOfTimeSlices = boost::lexical_cast<int64_t>(value2->AsString()); | |
409 std::string expected = boost::lexical_cast<std::string>(numberOfSlices * numberOfTimeSlices); | |
410 db.SetMetadata(series, MetadataType_Series_ExpectedNumberOfInstances, expected); | |
411 } | |
412 | |
413 else if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES)) != NULL) | |
414 { | |
415 db.SetMetadata(series, MetadataType_Series_ExpectedNumberOfInstances, value->AsString()); | |
416 } | |
417 } | |
418 catch (boost::bad_lexical_cast) | |
419 { | |
420 } | |
421 } | |
422 | |
423 | |
1237 | 424 |
425 | |
1238 | 426 bool ServerIndex::GetMetadataAsInteger(int64_t& result, |
1237 | 427 int64_t id, |
428 MetadataType type) | |
429 { | |
1238 | 430 std::string s; |
1247 | 431 if (!db_.LookupMetadata(s, id, type)) |
1237 | 432 { |
433 return false; | |
434 } | |
435 | |
436 try | |
437 { | |
1238 | 438 result = boost::lexical_cast<int64_t>(s); |
1237 | 439 return true; |
440 } | |
441 catch (boost::bad_lexical_cast&) | |
442 { | |
443 return false; | |
444 } | |
445 } | |
446 | |
447 | |
1297 | 448 void ServerIndex::LogChange(int64_t internalId, |
449 ChangeType changeType, | |
450 ResourceType resourceType, | |
451 const std::string& publicId) | |
452 { | |
453 ServerIndexChange change(changeType, resourceType, publicId); | |
1300
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
454 |
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
455 if (changeType <= ChangeType_INTERNAL_LastLogged) |
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
456 { |
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
457 db_.LogChange(internalId, change); |
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
458 } |
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
459 |
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
460 assert(listener_.get() != NULL); |
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
461 listener_->SignalChange(change); |
1297 | 462 } |
463 | |
1237 | 464 |
465 uint64_t ServerIndex::IncrementGlobalSequenceInternal(GlobalProperty property) | |
466 { | |
467 std::string oldValue; | |
468 | |
1247 | 469 if (db_.LookupGlobalProperty(oldValue, property)) |
1237 | 470 { |
471 uint64_t oldNumber; | |
472 | |
473 try | |
474 { | |
475 oldNumber = boost::lexical_cast<uint64_t>(oldValue); | |
1247 | 476 db_.SetGlobalProperty(property, boost::lexical_cast<std::string>(oldNumber + 1)); |
1237 | 477 return oldNumber + 1; |
478 } | |
479 catch (boost::bad_lexical_cast&) | |
480 { | |
481 throw OrthancException(ErrorCode_InternalError); | |
482 } | |
483 } | |
484 else | |
485 { | |
486 // Initialize the sequence at "1" | |
1247 | 487 db_.SetGlobalProperty(property, "1"); |
1237 | 488 return 1; |
489 } | |
490 } | |
491 | |
492 | |
493 | |
1299 | 494 int64_t ServerIndex::CreateResource(const std::string& publicId, |
495 ResourceType type) | |
496 { | |
497 int64_t id = db_.CreateResource(publicId, type); | |
498 | |
499 ChangeType changeType; | |
500 switch (type) | |
501 { | |
502 case ResourceType_Patient: | |
503 changeType = ChangeType_NewPatient; | |
504 break; | |
505 | |
506 case ResourceType_Study: | |
507 changeType = ChangeType_NewStudy; | |
508 break; | |
509 | |
510 case ResourceType_Series: | |
511 changeType = ChangeType_NewSeries; | |
512 break; | |
513 | |
514 case ResourceType_Instance: | |
515 changeType = ChangeType_NewInstance; | |
516 break; | |
517 | |
518 default: | |
519 throw OrthancException(ErrorCode_InternalError); | |
520 } | |
521 | |
522 ServerIndexChange change(changeType, type, publicId); | |
523 db_.LogChange(id, change); | |
1300
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
524 |
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
525 assert(listener_.get() != NULL); |
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
526 listener_->SignalChange(change); |
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
527 |
1299 | 528 return id; |
529 } | |
530 | |
1286 | 531 |
226
8a26a8e85edf
refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
224
diff
changeset
|
532 ServerIndex::ServerIndex(ServerContext& context, |
1247 | 533 IDatabaseWrapper& db) : |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
534 done_(false), |
1247 | 535 db_(db), |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
536 maximumStorageSize_(0), |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
537 maximumPatients_(0) |
186
f68c039b0571
preparing refactoring of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
180
diff
changeset
|
538 { |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
539 listener_.reset(new Listener(context)); |
1247 | 540 db_.SetListener(*listener_); |
180
626777d01dc4
use of hashes to index dicom objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
179
diff
changeset
|
541 |
1247 | 542 currentStorageSize_ = db_.GetTotalCompressedSize(); |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
543 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
544 // Initial recycling if the parameters have changed since the last |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
545 // execution of Orthanc |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
546 StandaloneRecycling(); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
547 |
1306
8cd5784a6d80
IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1305
diff
changeset
|
548 if (db.HasFlushToDisk()) |
8cd5784a6d80
IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1305
diff
changeset
|
549 { |
8cd5784a6d80
IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1305
diff
changeset
|
550 flushThread_ = boost::thread(FlushThread, this); |
8cd5784a6d80
IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1305
diff
changeset
|
551 } |
8cd5784a6d80
IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1305
diff
changeset
|
552 |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
553 unstableResourcesMonitorThread_ = boost::thread(UnstableResourcesMonitorThread, this); |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
554 } |
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
555 |
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
556 |
1453
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
557 |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
558 ServerIndex::~ServerIndex() |
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
559 { |
1453
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
560 if (!done_) |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
561 { |
1453
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
562 LOG(ERROR) << "INTERNAL ERROR: ServerIndex::Stop() should be invoked manually to avoid mess in the destruction order!"; |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
563 Stop(); |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
564 } |
0 | 565 } |
566 | |
567 | |
1453
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
568 |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
569 void ServerIndex::Stop() |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
570 { |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
571 if (!done_) |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
572 { |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
573 done_ = true; |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
574 |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
575 if (db_.HasFlushToDisk() && |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
576 flushThread_.joinable()) |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
577 { |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
578 flushThread_.join(); |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
579 } |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
580 |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
581 if (unstableResourcesMonitorThread_.joinable()) |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
582 { |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
583 unstableResourcesMonitorThread_.join(); |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
584 } |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
585 } |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
586 } |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
587 |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
588 |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
589 |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
590 StoreStatus ServerIndex::Store(std::map<MetadataType, std::string>& instanceMetadata, |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
591 const DicomMap& dicomSummary, |
232
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
592 const Attachments& attachments, |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
593 const std::string& remoteAet, |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
594 const MetadataMap& metadata) |
0 | 595 { |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
596 boost::mutex::scoped_lock lock(mutex_); |
0 | 597 |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
598 instanceMetadata.clear(); |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
599 |
178 | 600 DicomInstanceHasher hasher(dicomSummary); |
0 | 601 |
602 try | |
603 { | |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
604 Transaction t(*this); |
0 | 605 |
202 | 606 // Do nothing if the instance already exists |
0 | 607 { |
432 | 608 ResourceType type; |
609 int64_t tmp; | |
1294 | 610 if (db_.LookupResource(tmp, type, hasher.HashInstance())) |
432 | 611 { |
612 assert(type == ResourceType_Instance); | |
1247 | 613 db_.GetAllMetadata(instanceMetadata, tmp); |
432 | 614 return StoreStatus_AlreadyStored; |
615 } | |
0 | 616 } |
617 | |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
618 // Ensure there is enough room in the storage for the new instance |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
619 uint64_t instanceSize = 0; |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
620 for (Attachments::const_iterator it = attachments.begin(); |
656 | 621 it != attachments.end(); ++it) |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
622 { |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
623 instanceSize += it->GetCompressedSize(); |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
624 } |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
625 |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
626 Recycle(instanceSize, hasher.HashPatient()); |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
627 |
202 | 628 // Create the instance |
1299 | 629 int64_t instance = CreateResource(hasher.HashInstance(), ResourceType_Instance); |
1668
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
630 Toolbox::SetMainDicomTags(db_, instance, ResourceType_Instance, dicomSummary, true); |
202 | 631 |
432 | 632 // Detect up to which level the patient/study/series/instance |
633 // hierarchy must be created | |
634 int64_t patient = -1, study = -1, series = -1; | |
635 bool isNewPatient = false; | |
636 bool isNewStudy = false; | |
637 bool isNewSeries = false; | |
638 | |
0 | 639 { |
432 | 640 ResourceType dummy; |
641 | |
1294 | 642 if (db_.LookupResource(series, dummy, hasher.HashSeries())) |
432 | 643 { |
644 assert(dummy == ResourceType_Series); | |
645 // The patient, the study and the series already exist | |
646 | |
1294 | 647 bool ok = (db_.LookupResource(patient, dummy, hasher.HashPatient()) && |
648 db_.LookupResource(study, dummy, hasher.HashStudy())); | |
432 | 649 assert(ok); |
650 } | |
1294 | 651 else if (db_.LookupResource(study, dummy, hasher.HashStudy())) |
432 | 652 { |
653 assert(dummy == ResourceType_Study); | |
654 | |
655 // New series: The patient and the study already exist | |
656 isNewSeries = true; | |
657 | |
1294 | 658 bool ok = db_.LookupResource(patient, dummy, hasher.HashPatient()); |
432 | 659 assert(ok); |
660 } | |
1294 | 661 else if (db_.LookupResource(patient, dummy, hasher.HashPatient())) |
432 | 662 { |
663 assert(dummy == ResourceType_Patient); | |
664 | |
665 // New study and series: The patient already exist | |
666 isNewStudy = true; | |
667 isNewSeries = true; | |
668 } | |
669 else | |
670 { | |
671 // New patient, study and series: Nothing exists | |
672 isNewPatient = true; | |
673 isNewStudy = true; | |
674 isNewSeries = true; | |
675 } | |
676 } | |
677 | |
678 // Create the series if needed | |
679 if (isNewSeries) | |
680 { | |
1299 | 681 series = CreateResource(hasher.HashSeries(), ResourceType_Series); |
1668
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
682 Toolbox::SetMainDicomTags(db_, series, ResourceType_Series, dicomSummary, true); |
432 | 683 } |
202 | 684 |
432 | 685 // Create the study if needed |
686 if (isNewStudy) | |
687 { | |
1299 | 688 study = CreateResource(hasher.HashStudy(), ResourceType_Study); |
1668
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
689 Toolbox::SetMainDicomTags(db_, study, ResourceType_Study, dicomSummary, true); |
1711
5ebd6cbb3da8
Backed out changeset 2ad22b2970a2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1709
diff
changeset
|
690 Toolbox::SetMainDicomTags(db_, study, ResourceType_Patient, dicomSummary, false); // New in version 0.9.5 (db v6) |
432 | 691 } |
692 | |
693 // Create the patient if needed | |
694 if (isNewPatient) | |
695 { | |
1299 | 696 patient = CreateResource(hasher.HashPatient(), ResourceType_Patient); |
1668
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
697 Toolbox::SetMainDicomTags(db_, patient, ResourceType_Patient, dicomSummary, true); |
432 | 698 } |
202 | 699 |
432 | 700 // Create the parent-to-child links |
1247 | 701 db_.AttachChild(series, instance); |
432 | 702 |
703 if (isNewSeries) | |
704 { | |
1247 | 705 db_.AttachChild(study, series); |
0 | 706 } |
432 | 707 |
708 if (isNewStudy) | |
0 | 709 { |
1247 | 710 db_.AttachChild(patient, study); |
0 | 711 } |
712 | |
432 | 713 // Sanity checks |
714 assert(patient != -1); | |
715 assert(study != -1); | |
716 assert(series != -1); | |
717 assert(instance != -1); | |
718 | |
202 | 719 // Attach the files to the newly created instance |
232
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
720 for (Attachments::const_iterator it = attachments.begin(); |
656 | 721 it != attachments.end(); ++it) |
232
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
722 { |
1247 | 723 db_.AddAttachment(instance, *it); |
232
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
724 } |
202 | 725 |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
726 // Attach the user-specified metadata |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
727 for (MetadataMap::const_iterator |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
728 it = metadata.begin(); it != metadata.end(); ++it) |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
729 { |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
730 switch (it->first.first) |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
731 { |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
732 case ResourceType_Patient: |
1247 | 733 db_.SetMetadata(patient, it->first.second, it->second); |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
734 break; |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
735 |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
736 case ResourceType_Study: |
1247 | 737 db_.SetMetadata(study, it->first.second, it->second); |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
738 break; |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
739 |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
740 case ResourceType_Series: |
1247 | 741 db_.SetMetadata(series, it->first.second, it->second); |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
742 break; |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
743 |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
744 case ResourceType_Instance: |
1247 | 745 db_.SetMetadata(instance, it->first.second, it->second); |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
746 instanceMetadata[it->first.second] = it->second; |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
747 break; |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
748 |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
749 default: |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
750 throw OrthancException(ErrorCode_ParameterOutOfRange); |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
751 } |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
752 } |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
753 |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
754 // Attach the auto-computed metadata for the patient/study/series levels |
432 | 755 std::string now = Toolbox::GetNowIsoString(); |
1247 | 756 db_.SetMetadata(series, MetadataType_LastUpdate, now); |
757 db_.SetMetadata(study, MetadataType_LastUpdate, now); | |
758 db_.SetMetadata(patient, MetadataType_LastUpdate, now); | |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
759 |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
760 // Attach the auto-computed metadata for the instance level, |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
761 // reflecting these additions into the input metadata map |
1247 | 762 db_.SetMetadata(instance, MetadataType_Instance_ReceptionDate, now); |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
763 instanceMetadata[MetadataType_Instance_ReceptionDate] = now; |
202 | 764 |
1247 | 765 db_.SetMetadata(instance, MetadataType_Instance_RemoteAet, remoteAet); |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
766 instanceMetadata[MetadataType_Instance_RemoteAet] = remoteAet; |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
767 |
202 | 768 const DicomValue* value; |
769 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_INSTANCE_NUMBER)) != NULL || | |
770 (value = dicomSummary.TestAndGetValue(DICOM_TAG_IMAGE_INDEX)) != NULL) | |
0 | 771 { |
1247 | 772 db_.SetMetadata(instance, MetadataType_Instance_IndexInSeries, value->AsString()); |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
773 instanceMetadata[MetadataType_Instance_IndexInSeries] = value->AsString(); |
0 | 774 } |
775 | |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
776 // Check whether the series of this new instance is now completed |
202 | 777 if (isNewSeries) |
778 { | |
1247 | 779 ComputeExpectedNumberOfInstances(db_, series, dicomSummary); |
202 | 780 } |
781 | |
205
6ab754744446
logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
204
diff
changeset
|
782 SeriesStatus seriesStatus = GetSeriesStatus(series); |
6ab754744446
logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
204
diff
changeset
|
783 if (seriesStatus == SeriesStatus_Complete) |
6ab754744446
logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
204
diff
changeset
|
784 { |
1237 | 785 LogChange(series, ChangeType_CompletedSeries, ResourceType_Series, hasher.HashSeries()); |
205
6ab754744446
logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
204
diff
changeset
|
786 } |
6ab754744446
logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
204
diff
changeset
|
787 |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
788 // Mark the parent resources of this instance as unstable |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
789 MarkAsUnstable(series, ResourceType_Series, hasher.HashSeries()); |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
790 MarkAsUnstable(study, ResourceType_Study, hasher.HashStudy()); |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
791 MarkAsUnstable(patient, ResourceType_Patient, hasher.HashPatient()); |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
792 |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
793 t.Commit(instanceSize); |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
794 |
0 | 795 return StoreStatus_Success; |
796 } | |
62 | 797 catch (OrthancException& e) |
0 | 798 { |
1247 | 799 LOG(ERROR) << "EXCEPTION [" << e.What() << "]"; |
0 | 800 } |
801 | |
802 return StoreStatus_Failure; | |
803 } | |
804 | |
805 | |
238 | 806 void ServerIndex::ComputeStatistics(Json::Value& target) |
0 | 807 { |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
808 boost::mutex::scoped_lock lock(mutex_); |
238 | 809 target = Json::objectValue; |
0 | 810 |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
811 uint64_t cs = currentStorageSize_; |
1247 | 812 assert(cs == db_.GetTotalCompressedSize()); |
813 uint64_t us = db_.GetTotalUncompressedSize(); | |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
814 target["TotalDiskSize"] = boost::lexical_cast<std::string>(cs); |
238 | 815 target["TotalUncompressedSize"] = boost::lexical_cast<std::string>(us); |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
816 target["TotalDiskSizeMB"] = static_cast<unsigned int>(cs / MEGA_BYTES); |
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
817 target["TotalUncompressedSizeMB"] = static_cast<unsigned int>(us / MEGA_BYTES); |
238 | 818 |
1247 | 819 target["CountPatients"] = static_cast<unsigned int>(db_.GetResourceCount(ResourceType_Patient)); |
820 target["CountStudies"] = static_cast<unsigned int>(db_.GetResourceCount(ResourceType_Study)); | |
821 target["CountSeries"] = static_cast<unsigned int>(db_.GetResourceCount(ResourceType_Series)); | |
822 target["CountInstances"] = static_cast<unsigned int>(db_.GetResourceCount(ResourceType_Instance)); | |
238 | 823 } |
824 | |
187
8e673a65564d
refactoring of storing new instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
186
diff
changeset
|
825 |
8e673a65564d
refactoring of storing new instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
186
diff
changeset
|
826 |
585 | 827 SeriesStatus ServerIndex::GetSeriesStatus(int64_t id) |
199 | 828 { |
829 // Get the expected number of instances in this series (from the metadata) | |
1238 | 830 int64_t expected; |
831 if (!GetMetadataAsInteger(expected, id, MetadataType_Series_ExpectedNumberOfInstances)) | |
199 | 832 { |
833 return SeriesStatus_Unknown; | |
834 } | |
835 | |
836 // Loop over the instances of this series | |
837 std::list<int64_t> children; | |
1247 | 838 db_.GetChildrenInternalId(children, id); |
199 | 839 |
1238 | 840 std::set<int64_t> instances; |
199 | 841 for (std::list<int64_t>::const_iterator |
656 | 842 it = children.begin(); it != children.end(); ++it) |
199 | 843 { |
844 // Get the index of this instance in the series | |
1238 | 845 int64_t index; |
846 if (!GetMetadataAsInteger(index, *it, MetadataType_Instance_IndexInSeries)) | |
199 | 847 { |
848 return SeriesStatus_Unknown; | |
849 } | |
850 | |
656 | 851 if (!(index > 0 && index <= expected)) |
199 | 852 { |
853 // Out-of-range instance index | |
854 return SeriesStatus_Inconsistent; | |
855 } | |
856 | |
857 if (instances.find(index) != instances.end()) | |
858 { | |
859 // Twice the same instance index | |
860 return SeriesStatus_Inconsistent; | |
861 } | |
862 | |
863 instances.insert(index); | |
864 } | |
865 | |
1238 | 866 if (static_cast<int64_t>(instances.size()) == expected) |
199 | 867 { |
868 return SeriesStatus_Complete; | |
869 } | |
870 else | |
871 { | |
872 return SeriesStatus_Missing; | |
873 } | |
874 } | |
875 | |
876 | |
1677
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
877 static std::string GetPatientIdOfStudy(IDatabaseWrapper& db, |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
878 int64_t resourceId) |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
879 { |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
880 int64_t patient; |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
881 if (!db.LookupParent(patient, resourceId)) |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
882 { |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
883 throw OrthancException(ErrorCode_InternalError); |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
884 } |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
885 |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
886 DicomMap tags; |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
887 db.GetMainDicomTags(tags, patient); |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
888 |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
889 if (tags.HasTag(DICOM_TAG_PATIENT_ID)) |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
890 { |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
891 return tags.GetValue(DICOM_TAG_PATIENT_ID).AsString(); |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
892 } |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
893 else |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
894 { |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
895 return ""; |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
896 } |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
897 } |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
898 |
199 | 899 |
202 | 900 void ServerIndex::MainDicomTagsToJson(Json::Value& target, |
1668
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
901 int64_t resourceId, |
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
902 ResourceType resourceType) |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
903 { |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
904 DicomMap tags; |
1247 | 905 db_.GetMainDicomTags(tags, resourceId); |
1676
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
906 |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
907 if (resourceType == ResourceType_Study) |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
908 { |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
909 DicomMap t1, t2; |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
910 tags.ExtractStudyInformation(t1); |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
911 tags.ExtractPatientInformation(t2); |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
912 |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
913 target["MainDicomTags"] = Json::objectValue; |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
914 FromDcmtkBridge::ToJson(target["MainDicomTags"], t1, true); |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
915 |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
916 target["PatientMainDicomTags"] = Json::objectValue; |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
917 FromDcmtkBridge::ToJson(target["PatientMainDicomTags"], t2, true); |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
918 |
1677
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
919 target["PatientMainDicomTags"]["PatientID"] = GetPatientIdOfStudy(db_, resourceId); |
1676
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
920 } |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
921 else |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
922 { |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
923 target["MainDicomTags"] = Json::objectValue; |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
924 FromDcmtkBridge::ToJson(target["MainDicomTags"], tags, true); |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
925 } |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
926 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
927 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
928 bool ServerIndex::LookupResource(Json::Value& result, |
199 | 929 const std::string& publicId, |
930 ResourceType expectedType) | |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
931 { |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
932 result = Json::objectValue; |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
933 |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
934 boost::mutex::scoped_lock lock(mutex_); |
199 | 935 |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
936 // Lookup for the requested resource |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
937 int64_t id; |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
938 ResourceType type; |
1294 | 939 if (!db_.LookupResource(id, type, publicId) || |
199 | 940 type != expectedType) |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
941 { |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
942 return false; |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
943 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
944 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
945 // Find the parent resource (if it exists) |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
946 if (type != ResourceType_Patient) |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
947 { |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
948 int64_t parentId; |
1247 | 949 if (!db_.LookupParent(parentId, id)) |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
950 { |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
951 throw OrthancException(ErrorCode_InternalError); |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
952 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
953 |
1247 | 954 std::string parent = db_.GetPublicId(parentId); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
955 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
956 switch (type) |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
957 { |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
958 case ResourceType_Study: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
959 result["ParentPatient"] = parent; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
960 break; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
961 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
962 case ResourceType_Series: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
963 result["ParentStudy"] = parent; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
964 break; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
965 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
966 case ResourceType_Instance: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
967 result["ParentSeries"] = parent; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
968 break; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
969 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
970 default: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
971 throw OrthancException(ErrorCode_InternalError); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
972 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
973 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
974 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
975 // List the children resources |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
976 std::list<std::string> children; |
1247 | 977 db_.GetChildrenPublicId(children, id); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
978 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
979 if (type != ResourceType_Instance) |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
980 { |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
981 Json::Value c = Json::arrayValue; |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
982 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
983 for (std::list<std::string>::const_iterator |
656 | 984 it = children.begin(); it != children.end(); ++it) |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
985 { |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
986 c.append(*it); |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
987 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
988 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
989 switch (type) |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
990 { |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
991 case ResourceType_Patient: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
992 result["Studies"] = c; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
993 break; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
994 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
995 case ResourceType_Study: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
996 result["Series"] = c; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
997 break; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
998 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
999 case ResourceType_Series: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1000 result["Instances"] = c; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1001 break; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1002 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1003 default: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1004 throw OrthancException(ErrorCode_InternalError); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1005 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1006 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1007 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1008 // Set the resource type |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1009 switch (type) |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1010 { |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1011 case ResourceType_Patient: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1012 result["Type"] = "Patient"; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1013 break; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1014 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1015 case ResourceType_Study: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1016 result["Type"] = "Study"; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1017 break; |
199 | 1018 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1019 case ResourceType_Series: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1020 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1021 result["Type"] = "Series"; |
434
ccf3a0a43dac
EnumerationDictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
1022 result["Status"] = EnumerationToString(GetSeriesStatus(id)); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1023 |
1238 | 1024 int64_t i; |
1237 | 1025 if (GetMetadataAsInteger(i, id, MetadataType_Series_ExpectedNumberOfInstances)) |
1238 | 1026 result["ExpectedNumberOfInstances"] = static_cast<int>(i); |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1027 else |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1028 result["ExpectedNumberOfInstances"] = Json::nullValue; |
200
9c58b2b03cf0
refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
199
diff
changeset
|
1029 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1030 break; |
200
9c58b2b03cf0
refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
199
diff
changeset
|
1031 } |
9c58b2b03cf0
refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
199
diff
changeset
|
1032 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1033 case ResourceType_Instance: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1034 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1035 result["Type"] = "Instance"; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1036 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1037 FileInfo attachment; |
1247 | 1038 if (!db_.LookupAttachment(attachment, id, FileContentType_Dicom)) |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1039 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1040 throw OrthancException(ErrorCode_InternalError); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1041 } |
200
9c58b2b03cf0
refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
199
diff
changeset
|
1042 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1043 result["FileSize"] = static_cast<unsigned int>(attachment.GetUncompressedSize()); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1044 result["FileUuid"] = attachment.GetUuid(); |
200
9c58b2b03cf0
refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
199
diff
changeset
|
1045 |
1238 | 1046 int64_t i; |
1237 | 1047 if (GetMetadataAsInteger(i, id, MetadataType_Instance_IndexInSeries)) |
1238 | 1048 result["IndexInSeries"] = static_cast<int>(i); |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1049 else |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1050 result["IndexInSeries"] = Json::nullValue; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1051 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1052 break; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1053 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1054 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1055 default: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1056 throw OrthancException(ErrorCode_InternalError); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1057 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1058 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1059 // Record the remaining information |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1060 result["ID"] = publicId; |
1668
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1061 MainDicomTagsToJson(result, id, type); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1062 |
315 | 1063 std::string tmp; |
1064 | |
1247 | 1065 if (db_.LookupMetadata(tmp, id, MetadataType_AnonymizedFrom)) |
1236 | 1066 { |
315 | 1067 result["AnonymizedFrom"] = tmp; |
1236 | 1068 } |
315 | 1069 |
1247 | 1070 if (db_.LookupMetadata(tmp, id, MetadataType_ModifiedFrom)) |
1236 | 1071 { |
315 | 1072 result["ModifiedFrom"] = tmp; |
1236 | 1073 } |
315 | 1074 |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1075 if (type == ResourceType_Patient || |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1076 type == ResourceType_Study || |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1077 type == ResourceType_Series) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1078 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1079 result["IsStable"] = !unstableResources_.Contains(id); |
1148
ac36589f699e
LastUpdate metadata is now always returned for patients, studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
1080 |
1247 | 1081 if (db_.LookupMetadata(tmp, id, MetadataType_LastUpdate)) |
1236 | 1082 { |
1148
ac36589f699e
LastUpdate metadata is now always returned for patients, studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
1083 result["LastUpdate"] = tmp; |
1236 | 1084 } |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1085 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1086 |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1087 return true; |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1088 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1089 |
0 | 1090 |
232
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
1091 bool ServerIndex::LookupAttachment(FileInfo& attachment, |
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
1092 const std::string& instanceUuid, |
233 | 1093 FileContentType contentType) |
0 | 1094 { |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
1095 boost::mutex::scoped_lock lock(mutex_); |
0 | 1096 |
193
a1b9d1e1497b
failed attempt to compile with linux standard base
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1097 int64_t id; |
a1b9d1e1497b
failed attempt to compile with linux standard base
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1098 ResourceType type; |
1294 | 1099 if (!db_.LookupResource(id, type, instanceUuid)) |
192
c56dc32266e0
refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
191
diff
changeset
|
1100 { |
1113
ba5c0908600c
Refactoring of HttpOutput ("Content-Length" header is now always sent)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1102
diff
changeset
|
1101 throw OrthancException(ErrorCode_UnknownResource); |
192
c56dc32266e0
refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
191
diff
changeset
|
1102 } |
193
a1b9d1e1497b
failed attempt to compile with linux standard base
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1103 |
1247 | 1104 if (db_.LookupAttachment(attachment, id, contentType)) |
232
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
1105 { |
233 | 1106 assert(attachment.GetContentType() == contentType); |
232
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
1107 return true; |
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
1108 } |
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
1109 else |
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
1110 { |
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
1111 return false; |
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
1112 } |
192
c56dc32266e0
refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
191
diff
changeset
|
1113 } |
c56dc32266e0
refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
191
diff
changeset
|
1114 |
c56dc32266e0
refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
191
diff
changeset
|
1115 |
c56dc32266e0
refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
191
diff
changeset
|
1116 |
1354 | 1117 void ServerIndex::GetAllUuids(std::list<std::string>& target, |
190 | 1118 ResourceType resourceType) |
0 | 1119 { |
1357 | 1120 boost::mutex::scoped_lock lock(mutex_); |
1121 db_.GetAllPublicIds(target, resourceType); | |
0 | 1122 } |
1123 | |
1124 | |
1509
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1125 void ServerIndex::GetAllUuids(std::list<std::string>& target, |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1126 ResourceType resourceType, |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1127 size_t since, |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1128 size_t limit) |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1129 { |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1130 if (limit == 0) |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1131 { |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1132 target.clear(); |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1133 return; |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1134 } |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1135 |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1136 boost::mutex::scoped_lock lock(mutex_); |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1137 db_.GetAllPublicIds(target, resourceType, since, limit); |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1138 } |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1139 |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1140 |
1244 | 1141 template <typename T> |
1142 static void FormatLog(Json::Value& target, | |
1143 const std::list<T>& log, | |
1144 const std::string& name, | |
1145 bool done, | |
1146 int64_t since) | |
1240 | 1147 { |
1148 Json::Value items = Json::arrayValue; | |
1244 | 1149 for (typename std::list<T>::const_iterator |
1304 | 1150 it = log.begin(); it != log.end(); ++it) |
1240 | 1151 { |
1152 Json::Value item; | |
1153 it->Format(item); | |
1154 items.append(item); | |
1155 } | |
1156 | |
1157 target = Json::objectValue; | |
1244 | 1158 target[name] = items; |
1240 | 1159 target["Done"] = done; |
1160 | |
1305 | 1161 int64_t last = (log.empty() ? since : log.back().GetSeq()); |
1240 | 1162 target["Last"] = static_cast<int>(last); |
1163 } | |
1164 | |
1165 | |
1247 | 1166 void ServerIndex::GetChanges(Json::Value& target, |
204 | 1167 int64_t since, |
0 | 1168 unsigned int maxResults) |
1169 { | |
1240 | 1170 std::list<ServerIndexChange> changes; |
1171 bool done; | |
1172 | |
1173 { | |
1174 boost::mutex::scoped_lock lock(mutex_); | |
1247 | 1175 db_.GetChanges(changes, done, since, maxResults); |
1240 | 1176 } |
1177 | |
1244 | 1178 FormatLog(target, changes, "Changes", done, since); |
237
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
1179 } |
0 | 1180 |
1240 | 1181 |
1247 | 1182 void ServerIndex::GetLastChange(Json::Value& target) |
237
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
1183 { |
1240 | 1184 std::list<ServerIndexChange> changes; |
1185 | |
1186 { | |
1187 boost::mutex::scoped_lock lock(mutex_); | |
1247 | 1188 db_.GetLastChange(changes); |
1240 | 1189 } |
1190 | |
1244 | 1191 FormatLog(target, changes, "Changes", true, 0); |
0 | 1192 } |
231 | 1193 |
1240 | 1194 |
231 | 1195 void ServerIndex::LogExportedResource(const std::string& publicId, |
1196 const std::string& remoteModality) | |
1197 { | |
1198 boost::mutex::scoped_lock lock(mutex_); | |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1199 Transaction transaction(*this); |
231 | 1200 |
1201 int64_t id; | |
1202 ResourceType type; | |
1294 | 1203 if (!db_.LookupResource(id, type, publicId)) |
231 | 1204 { |
1205 throw OrthancException(ErrorCode_InternalError); | |
1206 } | |
1207 | |
1208 std::string patientId; | |
1209 std::string studyInstanceUid; | |
1210 std::string seriesInstanceUid; | |
1211 std::string sopInstanceUid; | |
1212 | |
1213 int64_t currentId = id; | |
1214 ResourceType currentType = type; | |
1215 | |
1216 // Iteratively go up inside the patient/study/series/instance hierarchy | |
1217 bool done = false; | |
1218 while (!done) | |
1219 { | |
1220 DicomMap map; | |
1247 | 1221 db_.GetMainDicomTags(map, currentId); |
231 | 1222 |
1223 switch (currentType) | |
1224 { | |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1225 case ResourceType_Patient: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1226 patientId = map.GetValue(DICOM_TAG_PATIENT_ID).AsString(); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1227 done = true; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1228 break; |
231 | 1229 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1230 case ResourceType_Study: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1231 studyInstanceUid = map.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).AsString(); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1232 currentType = ResourceType_Patient; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1233 break; |
231 | 1234 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1235 case ResourceType_Series: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1236 seriesInstanceUid = map.GetValue(DICOM_TAG_SERIES_INSTANCE_UID).AsString(); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1237 currentType = ResourceType_Study; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1238 break; |
231 | 1239 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1240 case ResourceType_Instance: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1241 sopInstanceUid = map.GetValue(DICOM_TAG_SOP_INSTANCE_UID).AsString(); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1242 currentType = ResourceType_Series; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1243 break; |
231 | 1244 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1245 default: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1246 throw OrthancException(ErrorCode_InternalError); |
231 | 1247 } |
1248 | |
1249 // If we have not reached the Patient level, find the parent of | |
1250 // the current resource | |
1251 if (!done) | |
1252 { | |
1247 | 1253 bool ok = db_.LookupParent(currentId, currentId); |
375
d1ea72f1c967
major fix of storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
315
diff
changeset
|
1254 assert(ok); |
231 | 1255 } |
1256 } | |
1257 | |
1246 | 1258 ExportedResource resource(-1, |
1259 type, | |
1260 publicId, | |
1261 remoteModality, | |
1262 Toolbox::GetNowIsoString(), | |
1263 patientId, | |
1264 studyInstanceUid, | |
1265 seriesInstanceUid, | |
1266 sopInstanceUid); | |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1267 |
1247 | 1268 db_.LogExportedResource(resource); |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1269 transaction.Commit(0); |
231 | 1270 } |
1271 | |
1272 | |
1247 | 1273 void ServerIndex::GetExportedResources(Json::Value& target, |
231 | 1274 int64_t since, |
1275 unsigned int maxResults) | |
1276 { | |
1244 | 1277 std::list<ExportedResource> exported; |
1278 bool done; | |
1279 | |
1280 { | |
1281 boost::mutex::scoped_lock lock(mutex_); | |
1247 | 1282 db_.GetExportedResources(exported, done, since, maxResults); |
1244 | 1283 } |
1284 | |
1285 FormatLog(target, exported, "Exports", done, since); | |
231 | 1286 } |
237
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
1287 |
1244 | 1288 |
1247 | 1289 void ServerIndex::GetLastExportedResource(Json::Value& target) |
237
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
1290 { |
1244 | 1291 std::list<ExportedResource> exported; |
1292 | |
1293 { | |
1294 boost::mutex::scoped_lock lock(mutex_); | |
1247 | 1295 db_.GetLastExportedResource(exported); |
1244 | 1296 } |
1297 | |
1298 FormatLog(target, exported, "Exports", true, 0); | |
237
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
1299 } |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1300 |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1301 |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1302 bool ServerIndex::IsRecyclingNeeded(uint64_t instanceSize) |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1303 { |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1304 if (maximumStorageSize_ != 0) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1305 { |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
1306 uint64_t currentSize = currentStorageSize_ - listener_->GetSizeOfFilesToRemove(); |
1247 | 1307 assert(db_.GetTotalCompressedSize() == currentSize); |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
1308 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1309 if (currentSize + instanceSize > maximumStorageSize_) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1310 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1311 return true; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1312 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1313 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1314 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1315 if (maximumPatients_ != 0) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1316 { |
1247 | 1317 uint64_t patientCount = db_.GetResourceCount(ResourceType_Patient); |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1318 if (patientCount > maximumPatients_) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1319 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1320 return true; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1321 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1322 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1323 |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1324 return false; |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1325 } |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1326 |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1327 |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1328 void ServerIndex::Recycle(uint64_t instanceSize, |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1329 const std::string& newPatientId) |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1330 { |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1331 if (!IsRecyclingNeeded(instanceSize)) |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1332 { |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1333 return; |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1334 } |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1335 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1336 // Check whether other DICOM instances from this patient are |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1337 // already stored |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1338 int64_t patientToAvoid; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1339 ResourceType type; |
1294 | 1340 bool hasPatientToAvoid = db_.LookupResource(patientToAvoid, type, newPatientId); |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1341 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1342 if (hasPatientToAvoid && type != ResourceType_Patient) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1343 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1344 throw OrthancException(ErrorCode_InternalError); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1345 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1346 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1347 // Iteratively select patient to remove until there is enough |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1348 // space in the DICOM store |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1349 int64_t patientToRecycle; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1350 while (true) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1351 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1352 // If other instances of this patient are already in the store, |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1353 // we must avoid to recycle them |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1354 bool ok = hasPatientToAvoid ? |
1247 | 1355 db_.SelectPatientToRecycle(patientToRecycle, patientToAvoid) : |
1356 db_.SelectPatientToRecycle(patientToRecycle); | |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1357 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1358 if (!ok) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1359 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1360 throw OrthancException(ErrorCode_FullStorage); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1361 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1362 |
1331
77e129ba64e4
Prevent freeze on C-FIND if no DICOM tag is to be returned
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1310
diff
changeset
|
1363 VLOG(1) << "Recycling one patient"; |
1247 | 1364 db_.DeleteResource(patientToRecycle); |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1365 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1366 if (!IsRecyclingNeeded(instanceSize)) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1367 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1368 // OK, we're done |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1369 break; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1370 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1371 } |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1372 } |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1373 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1374 void ServerIndex::SetMaximumPatientCount(unsigned int count) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1375 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1376 boost::mutex::scoped_lock lock(mutex_); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1377 maximumPatients_ = count; |
270
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1378 |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1379 if (count == 0) |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1380 { |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1381 LOG(WARNING) << "No limit on the number of stored patients"; |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1382 } |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1383 else |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1384 { |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1385 LOG(WARNING) << "At most " << count << " patients will be stored"; |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1386 } |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1387 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1388 StandaloneRecycling(); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1389 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1390 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1391 void ServerIndex::SetMaximumStorageSize(uint64_t size) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1392 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1393 boost::mutex::scoped_lock lock(mutex_); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1394 maximumStorageSize_ = size; |
270
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1395 |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1396 if (size == 0) |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1397 { |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1398 LOG(WARNING) << "No limit on the size of the storage area"; |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1399 } |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1400 else |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1401 { |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1402 LOG(WARNING) << "At most " << (size / MEGA_BYTES) << "MB will be used for the storage area"; |
270
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1403 } |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1404 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1405 StandaloneRecycling(); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1406 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1407 |
272
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1408 void ServerIndex::StandaloneRecycling() |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1409 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1410 // WARNING: No mutex here, do not include this as a public method |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
1411 Transaction t(*this); |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1412 Recycle(0, ""); |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
1413 t.Commit(0); |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1414 } |
272
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1415 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1416 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1417 bool ServerIndex::IsProtectedPatient(const std::string& publicId) |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1418 { |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1419 boost::mutex::scoped_lock lock(mutex_); |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1420 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1421 // Lookup for the requested resource |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1422 int64_t id; |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1423 ResourceType type; |
1294 | 1424 if (!db_.LookupResource(id, type, publicId) || |
272
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1425 type != ResourceType_Patient) |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1426 { |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1427 throw OrthancException(ErrorCode_ParameterOutOfRange); |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1428 } |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1429 |
1247 | 1430 return db_.IsProtectedPatient(id); |
272
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1431 } |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1432 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1433 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1434 void ServerIndex::SetProtectedPatient(const std::string& publicId, |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1435 bool isProtected) |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1436 { |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1437 boost::mutex::scoped_lock lock(mutex_); |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1438 Transaction transaction(*this); |
272
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1439 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1440 // Lookup for the requested resource |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1441 int64_t id; |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1442 ResourceType type; |
1294 | 1443 if (!db_.LookupResource(id, type, publicId) || |
272
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1444 type != ResourceType_Patient) |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1445 { |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1446 throw OrthancException(ErrorCode_ParameterOutOfRange); |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1447 } |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1448 |
1247 | 1449 db_.SetProtectedPatient(id, isProtected); |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1450 transaction.Commit(0); |
272
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1451 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1452 if (isProtected) |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1453 LOG(INFO) << "Patient " << publicId << " has been protected"; |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1454 else |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1455 LOG(INFO) << "Patient " << publicId << " has been unprotected"; |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1456 } |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1457 |
304 | 1458 |
714
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1459 void ServerIndex::GetChildren(std::list<std::string>& result, |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1460 const std::string& publicId) |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1461 { |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1462 result.clear(); |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1463 |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1464 boost::mutex::scoped_lock lock(mutex_); |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1465 |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1466 ResourceType type; |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1467 int64_t resource; |
1294 | 1468 if (!db_.LookupResource(resource, type, publicId)) |
714
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1469 { |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1470 throw OrthancException(ErrorCode_UnknownResource); |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1471 } |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1472 |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1473 if (type == ResourceType_Instance) |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1474 { |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1475 // An instance cannot have a child |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1476 throw OrthancException(ErrorCode_BadParameterType); |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1477 } |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1478 |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1479 std::list<int64_t> tmp; |
1247 | 1480 db_.GetChildrenInternalId(tmp, resource); |
714
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1481 |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1482 for (std::list<int64_t>::const_iterator |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1483 it = tmp.begin(); it != tmp.end(); ++it) |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1484 { |
1247 | 1485 result.push_back(db_.GetPublicId(*it)); |
714
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1486 } |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1487 } |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1488 |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1489 |
304 | 1490 void ServerIndex::GetChildInstances(std::list<std::string>& result, |
1491 const std::string& publicId) | |
1492 { | |
1493 result.clear(); | |
1494 | |
1495 boost::mutex::scoped_lock lock(mutex_); | |
1496 | |
1497 ResourceType type; | |
1498 int64_t top; | |
1294 | 1499 if (!db_.LookupResource(top, type, publicId)) |
304 | 1500 { |
1501 throw OrthancException(ErrorCode_UnknownResource); | |
1502 } | |
1503 | |
1504 if (type == ResourceType_Instance) | |
1505 { | |
1506 // The resource is already an instance: Do not go down the hierarchy | |
1507 result.push_back(publicId); | |
1508 return; | |
1509 } | |
1510 | |
1511 std::stack<int64_t> toExplore; | |
1512 toExplore.push(top); | |
1513 | |
1514 std::list<int64_t> tmp; | |
1515 | |
1516 while (!toExplore.empty()) | |
1517 { | |
1518 // Get the internal ID of the current resource | |
1519 int64_t resource = toExplore.top(); | |
1520 toExplore.pop(); | |
1521 | |
1247 | 1522 if (db_.GetResourceType(resource) == ResourceType_Instance) |
304 | 1523 { |
1247 | 1524 result.push_back(db_.GetPublicId(resource)); |
304 | 1525 } |
1526 else | |
1527 { | |
1528 // Tag all the children of this resource as to be explored | |
1247 | 1529 db_.GetChildrenInternalId(tmp, resource); |
304 | 1530 for (std::list<int64_t>::const_iterator |
656 | 1531 it = tmp.begin(); it != tmp.end(); ++it) |
304 | 1532 { |
1533 toExplore.push(*it); | |
1534 } | |
1535 } | |
1536 } | |
1537 } | |
1538 | |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1539 |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1540 void ServerIndex::SetMetadata(const std::string& publicId, |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1541 MetadataType type, |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1542 const std::string& value) |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1543 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1544 boost::mutex::scoped_lock lock(mutex_); |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1545 |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1546 ResourceType rtype; |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1547 int64_t id; |
1294 | 1548 if (!db_.LookupResource(id, rtype, publicId)) |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1549 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1550 throw OrthancException(ErrorCode_UnknownResource); |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1551 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1552 |
1247 | 1553 db_.SetMetadata(id, type, value); |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1554 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1555 |
438 | 1556 |
1557 void ServerIndex::DeleteMetadata(const std::string& publicId, | |
1558 MetadataType type) | |
1559 { | |
1560 boost::mutex::scoped_lock lock(mutex_); | |
1561 | |
1562 ResourceType rtype; | |
1563 int64_t id; | |
1294 | 1564 if (!db_.LookupResource(id, rtype, publicId)) |
438 | 1565 { |
1566 throw OrthancException(ErrorCode_UnknownResource); | |
1567 } | |
1568 | |
1247 | 1569 db_.DeleteMetadata(id, type); |
438 | 1570 } |
1571 | |
1572 | |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1573 bool ServerIndex::LookupMetadata(std::string& target, |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1574 const std::string& publicId, |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1575 MetadataType type) |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1576 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1577 boost::mutex::scoped_lock lock(mutex_); |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1578 |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1579 ResourceType rtype; |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1580 int64_t id; |
1294 | 1581 if (!db_.LookupResource(id, rtype, publicId)) |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1582 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1583 throw OrthancException(ErrorCode_UnknownResource); |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1584 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1585 |
1247 | 1586 return db_.LookupMetadata(target, id, type); |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1587 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1588 |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1589 |
739 | 1590 void ServerIndex::ListAvailableMetadata(std::list<MetadataType>& target, |
436
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1591 const std::string& publicId) |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1592 { |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1593 boost::mutex::scoped_lock lock(mutex_); |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1594 |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1595 ResourceType rtype; |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1596 int64_t id; |
1294 | 1597 if (!db_.LookupResource(id, rtype, publicId)) |
436
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1598 { |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1599 throw OrthancException(ErrorCode_UnknownResource); |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1600 } |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1601 |
1247 | 1602 db_.ListAvailableMetadata(target, id); |
436
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1603 } |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1604 |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1605 |
697
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1606 void ServerIndex::ListAvailableAttachments(std::list<FileContentType>& target, |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1607 const std::string& publicId, |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1608 ResourceType expectedType) |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1609 { |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1610 boost::mutex::scoped_lock lock(mutex_); |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1611 |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1612 ResourceType type; |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1613 int64_t id; |
1294 | 1614 if (!db_.LookupResource(id, type, publicId) || |
697
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1615 expectedType != type) |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1616 { |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1617 throw OrthancException(ErrorCode_UnknownResource); |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1618 } |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1619 |
1247 | 1620 db_.ListAvailableAttachments(target, id); |
697
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1621 } |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1622 |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1623 |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1624 bool ServerIndex::LookupParent(std::string& target, |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1625 const std::string& publicId) |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1626 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1627 boost::mutex::scoped_lock lock(mutex_); |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1628 |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1629 ResourceType type; |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1630 int64_t id; |
1294 | 1631 if (!db_.LookupResource(id, type, publicId)) |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1632 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1633 throw OrthancException(ErrorCode_UnknownResource); |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1634 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1635 |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1636 int64_t parentId; |
1247 | 1637 if (db_.LookupParent(parentId, id)) |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1638 { |
1247 | 1639 target = db_.GetPublicId(parentId); |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1640 return true; |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1641 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1642 else |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1643 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1644 return false; |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1645 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1646 } |
310 | 1647 |
1648 | |
1649 uint64_t ServerIndex::IncrementGlobalSequence(GlobalProperty sequence) | |
1650 { | |
1651 boost::mutex::scoped_lock lock(mutex_); | |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1652 Transaction transaction(*this); |
311 | 1653 |
1237 | 1654 uint64_t seq = IncrementGlobalSequenceInternal(sequence); |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1655 transaction.Commit(0); |
311 | 1656 |
1657 return seq; | |
310 | 1658 } |
315 | 1659 |
1660 | |
1661 | |
1662 void ServerIndex::LogChange(ChangeType changeType, | |
1663 const std::string& publicId) | |
1664 { | |
1665 boost::mutex::scoped_lock lock(mutex_); | |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1666 Transaction transaction(*this); |
315 | 1667 |
1668 int64_t id; | |
1669 ResourceType type; | |
1294 | 1670 if (!db_.LookupResource(id, type, publicId)) |
315 | 1671 { |
1672 throw OrthancException(ErrorCode_UnknownResource); | |
1673 } | |
1674 | |
1237 | 1675 LogChange(id, changeType, type, publicId); |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1676 transaction.Commit(0); |
315 | 1677 } |
413
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1678 |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1679 |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1680 void ServerIndex::DeleteChanges() |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1681 { |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1682 boost::mutex::scoped_lock lock(mutex_); |
1286 | 1683 db_.ClearChanges(); |
413
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1684 } |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1685 |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1686 void ServerIndex::DeleteExportedResources() |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1687 { |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1688 boost::mutex::scoped_lock lock(mutex_); |
1286 | 1689 db_.ClearExportedResources(); |
413
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1690 } |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1691 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1692 |
646 | 1693 void ServerIndex::GetStatisticsInternal(/* out */ uint64_t& compressedSize, |
1694 /* out */ uint64_t& uncompressedSize, | |
1695 /* out */ unsigned int& countStudies, | |
1696 /* out */ unsigned int& countSeries, | |
1697 /* out */ unsigned int& countInstances, | |
1698 /* in */ int64_t id, | |
1699 /* in */ ResourceType type) | |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1700 { |
646 | 1701 std::stack<int64_t> toExplore; |
1702 toExplore.push(id); | |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1703 |
646 | 1704 countInstances = 0; |
1705 countSeries = 0; | |
1706 countStudies = 0; | |
1707 compressedSize = 0; | |
1708 uncompressedSize = 0; | |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1709 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1710 while (!toExplore.empty()) |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1711 { |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1712 // Get the internal ID of the current resource |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1713 int64_t resource = toExplore.top(); |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1714 toExplore.pop(); |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1715 |
1247 | 1716 ResourceType thisType = db_.GetResourceType(resource); |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1717 |
702
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1718 std::list<FileContentType> f; |
1247 | 1719 db_.ListAvailableAttachments(f, resource); |
702
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1720 |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1721 for (std::list<FileContentType>::const_iterator |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1722 it = f.begin(); it != f.end(); ++it) |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1723 { |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1724 FileInfo attachment; |
1247 | 1725 if (db_.LookupAttachment(attachment, resource, *it)) |
702
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1726 { |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1727 compressedSize += attachment.GetCompressedSize(); |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1728 uncompressedSize += attachment.GetUncompressedSize(); |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1729 } |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1730 } |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1731 |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1732 if (thisType == ResourceType_Instance) |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1733 { |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1734 countInstances++; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1735 } |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1736 else |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1737 { |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1738 switch (thisType) |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1739 { |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1740 case ResourceType_Study: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1741 countStudies++; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1742 break; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1743 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1744 case ResourceType_Series: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1745 countSeries++; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1746 break; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1747 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1748 default: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1749 break; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1750 } |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1751 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1752 // Tag all the children of this resource as to be explored |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1753 std::list<int64_t> tmp; |
1247 | 1754 db_.GetChildrenInternalId(tmp, resource); |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1755 for (std::list<int64_t>::const_iterator |
656 | 1756 it = tmp.begin(); it != tmp.end(); ++it) |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1757 { |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1758 toExplore.push(*it); |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1759 } |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1760 } |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1761 } |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1762 |
646 | 1763 if (countStudies == 0) |
1764 { | |
1765 countStudies = 1; | |
1766 } | |
1767 | |
1768 if (countSeries == 0) | |
1769 { | |
1770 countSeries = 1; | |
1771 } | |
1772 } | |
1773 | |
1774 | |
1775 | |
1776 void ServerIndex::GetStatistics(Json::Value& target, | |
1777 const std::string& publicId) | |
1778 { | |
1779 boost::mutex::scoped_lock lock(mutex_); | |
1780 | |
1781 ResourceType type; | |
1782 int64_t top; | |
1294 | 1783 if (!db_.LookupResource(top, type, publicId)) |
646 | 1784 { |
1785 throw OrthancException(ErrorCode_UnknownResource); | |
1786 } | |
1787 | |
1788 uint64_t uncompressedSize; | |
1789 uint64_t compressedSize; | |
1790 unsigned int countStudies; | |
1791 unsigned int countSeries; | |
1792 unsigned int countInstances; | |
1793 GetStatisticsInternal(compressedSize, uncompressedSize, countStudies, | |
1794 countSeries, countInstances, top, type); | |
1795 | |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1796 target = Json::objectValue; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1797 target["DiskSize"] = boost::lexical_cast<std::string>(compressedSize); |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1798 target["DiskSizeMB"] = static_cast<unsigned int>(compressedSize / MEGA_BYTES); |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1799 target["UncompressedSize"] = boost::lexical_cast<std::string>(uncompressedSize); |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1800 target["UncompressedSizeMB"] = static_cast<unsigned int>(uncompressedSize / MEGA_BYTES); |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1801 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1802 switch (type) |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1803 { |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1804 // Do NOT add "break" below this point! |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1805 case ResourceType_Patient: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1806 target["CountStudies"] = countStudies; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1807 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1808 case ResourceType_Study: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1809 target["CountSeries"] = countSeries; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1810 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1811 case ResourceType_Series: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1812 target["CountInstances"] = countInstances; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1813 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1814 case ResourceType_Instance: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1815 default: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1816 break; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1817 } |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1818 } |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1819 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1820 |
646 | 1821 void ServerIndex::GetStatistics(/* out */ uint64_t& compressedSize, |
1822 /* out */ uint64_t& uncompressedSize, | |
1823 /* out */ unsigned int& countStudies, | |
1824 /* out */ unsigned int& countSeries, | |
1825 /* out */ unsigned int& countInstances, | |
1826 const std::string& publicId) | |
1827 { | |
1828 boost::mutex::scoped_lock lock(mutex_); | |
1829 | |
1830 ResourceType type; | |
1831 int64_t top; | |
1294 | 1832 if (!db_.LookupResource(top, type, publicId)) |
646 | 1833 { |
1834 throw OrthancException(ErrorCode_UnknownResource); | |
1835 } | |
1836 | |
1837 GetStatisticsInternal(compressedSize, uncompressedSize, countStudies, | |
1838 countSeries, countInstances, top, type); | |
1839 } | |
1840 | |
1841 | |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1842 void ServerIndex::UnstableResourcesMonitorThread(ServerIndex* that) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1843 { |
810
401a9633e492
configuration into a namespace
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
744
diff
changeset
|
1844 int stableAge = Configuration::GetGlobalIntegerParameter("StableAge", 60); |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1845 if (stableAge <= 0) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1846 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1847 stableAge = 60; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1848 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1849 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1850 LOG(INFO) << "Starting the monitor for stable resources (stable age = " << stableAge << ")"; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1851 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1852 while (!that->done_) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1853 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1854 // Check for stable resources each second |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1855 boost::this_thread::sleep(boost::posix_time::seconds(1)); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1856 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1857 boost::mutex::scoped_lock lock(that->mutex_); |
513 | 1858 |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1859 while (!that->unstableResources_.IsEmpty() && |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1860 that->unstableResources_.GetOldestPayload().GetAge() > static_cast<unsigned int>(stableAge)) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1861 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1862 // This DICOM resource has not received any new instance for |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1863 // some time. It can be considered as stable. |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1864 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1865 UnstableResourcePayload payload; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1866 int64_t id = that->unstableResources_.RemoveOldest(payload); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1867 |
513 | 1868 // Ensure that the resource is still existing before logging the change |
1247 | 1869 if (that->db_.IsExistingResource(id)) |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1870 { |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1871 switch (payload.GetResourceType()) |
513 | 1872 { |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1873 case ResourceType_Patient: |
1237 | 1874 that->LogChange(id, ChangeType_StablePatient, ResourceType_Patient, payload.GetPublicId()); |
513 | 1875 break; |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1876 |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1877 case ResourceType_Study: |
1237 | 1878 that->LogChange(id, ChangeType_StableStudy, ResourceType_Study, payload.GetPublicId()); |
513 | 1879 break; |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1880 |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1881 case ResourceType_Series: |
1237 | 1882 that->LogChange(id, ChangeType_StableSeries, ResourceType_Series, payload.GetPublicId()); |
513 | 1883 break; |
1884 | |
1885 default: | |
1886 throw OrthancException(ErrorCode_InternalError); | |
1887 } | |
1888 | |
1889 //LOG(INFO) << "Stable resource: " << EnumerationToString(payload.type_) << " " << id; | |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1890 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1891 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1892 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1893 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1894 LOG(INFO) << "Closing the monitor thread for stable resources"; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1895 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1896 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1897 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1898 void ServerIndex::MarkAsUnstable(int64_t id, |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1899 Orthanc::ResourceType type, |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1900 const std::string& publicId) |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1901 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1902 // WARNING: Before calling this method, "mutex_" must be locked. |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1903 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1904 assert(type == Orthanc::ResourceType_Patient || |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1905 type == Orthanc::ResourceType_Study || |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1906 type == Orthanc::ResourceType_Series); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1907 |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1908 UnstableResourcePayload payload(type, publicId); |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1909 unstableResources_.AddOrMakeMostRecent(id, payload); |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1910 //LOG(INFO) << "Unstable resource: " << EnumerationToString(type) << " " << id; |
1189
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
1911 |
1237 | 1912 LogChange(id, ChangeType_NewChildInstance, type, publicId); |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1913 } |
521 | 1914 |
1915 | |
1916 | |
1162 | 1917 void ServerIndex::LookupIdentifier(std::list<std::string>& result, |
1918 const DicomTag& tag, | |
1919 const std::string& value, | |
1920 ResourceType type) | |
615 | 1921 { |
1922 result.clear(); | |
1923 | |
1924 boost::mutex::scoped_lock lock(mutex_); | |
1925 | |
1926 std::list<int64_t> id; | |
1247 | 1927 db_.LookupIdentifier(id, tag, value); |
615 | 1928 |
1929 for (std::list<int64_t>::const_iterator | |
656 | 1930 it = id.begin(); it != id.end(); ++it) |
615 | 1931 { |
1247 | 1932 if (db_.GetResourceType(*it) == type) |
615 | 1933 { |
1247 | 1934 result.push_back(db_.GetPublicId(*it)); |
615 | 1935 } |
1936 } | |
1937 } | |
1938 | |
1939 | |
1162 | 1940 void ServerIndex::LookupIdentifier(std::list<std::string>& result, |
1941 const DicomTag& tag, | |
1942 const std::string& value) | |
521 | 1943 { |
1944 result.clear(); | |
1945 | |
1946 boost::mutex::scoped_lock lock(mutex_); | |
1947 | |
1948 std::list<int64_t> id; | |
1247 | 1949 db_.LookupIdentifier(id, tag, value); |
521 | 1950 |
1951 for (std::list<int64_t>::const_iterator | |
656 | 1952 it = id.begin(); it != id.end(); ++it) |
521 | 1953 { |
1247 | 1954 result.push_back(db_.GetPublicId(*it)); |
521 | 1955 } |
1956 } | |
1957 | |
1958 | |
1162 | 1959 void ServerIndex::LookupIdentifier(std::list< std::pair<ResourceType, std::string> >& result, |
1960 const std::string& value) | |
521 | 1961 { |
1962 result.clear(); | |
1963 | |
1964 boost::mutex::scoped_lock lock(mutex_); | |
1965 | |
1966 std::list<int64_t> id; | |
1247 | 1967 db_.LookupIdentifier(id, value); |
521 | 1968 |
1969 for (std::list<int64_t>::const_iterator | |
656 | 1970 it = id.begin(); it != id.end(); ++it) |
521 | 1971 { |
1247 | 1972 result.push_back(std::make_pair(db_.GetResourceType(*it), |
1973 db_.GetPublicId(*it))); | |
521 | 1974 } |
1975 } | |
699
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1976 |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1977 |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1978 StoreStatus ServerIndex::AddAttachment(const FileInfo& attachment, |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1979 const std::string& publicId) |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1980 { |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1981 boost::mutex::scoped_lock lock(mutex_); |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1982 |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1983 Transaction t(*this); |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1984 |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1985 ResourceType resourceType; |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1986 int64_t resourceId; |
1294 | 1987 if (!db_.LookupResource(resourceId, resourceType, publicId)) |
699
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1988 { |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1989 return StoreStatus_Failure; // Inexistent resource |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1990 } |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1991 |
704
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1992 // Remove possible previous attachment |
1247 | 1993 db_.DeleteAttachment(resourceId, attachment.GetContentType()); |
699
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1994 |
704
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1995 // Locate the patient of the target resource |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1996 int64_t patientId = resourceId; |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1997 for (;;) |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1998 { |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1999 int64_t parent; |
1247 | 2000 if (db_.LookupParent(parent, patientId)) |
704
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
2001 { |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
2002 // We have not reached the patient level yet |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
2003 patientId = parent; |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
2004 } |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
2005 else |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
2006 { |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
2007 // We have reached the patient level |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
2008 break; |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
2009 } |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
2010 } |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
2011 |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
2012 // Possibly apply the recycling mechanism while preserving this patient |
1247 | 2013 assert(db_.GetResourceType(patientId) == ResourceType_Patient); |
2014 Recycle(attachment.GetCompressedSize(), db_.GetPublicId(patientId)); | |
704
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
2015 |
1247 | 2016 db_.AddAttachment(resourceId, attachment); |
699
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
2017 |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
2018 t.Commit(attachment.GetCompressedSize()); |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
2019 |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
2020 return StoreStatus_Success; |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
2021 } |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
2022 |
702
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2023 |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2024 void ServerIndex::DeleteAttachment(const std::string& publicId, |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2025 FileContentType type) |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2026 { |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2027 boost::mutex::scoped_lock lock(mutex_); |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2028 Transaction t(*this); |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2029 |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2030 ResourceType rtype; |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2031 int64_t id; |
1294 | 2032 if (!db_.LookupResource(id, rtype, publicId)) |
702
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2033 { |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2034 throw OrthancException(ErrorCode_UnknownResource); |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2035 } |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2036 |
1247 | 2037 db_.DeleteAttachment(id, type); |
702
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2038 |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2039 t.Commit(0); |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2040 } |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2041 |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2042 |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2043 bool ServerIndex::GetMetadata(Json::Value& target, |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2044 const std::string& publicId) |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2045 { |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2046 boost::mutex::scoped_lock lock(mutex_); |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2047 |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2048 target = Json::objectValue; |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2049 |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2050 ResourceType type; |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2051 int64_t id; |
1294 | 2052 if (!db_.LookupResource(id, type, publicId)) |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2053 { |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2054 return false; |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2055 } |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2056 |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2057 std::list<MetadataType> metadata; |
1247 | 2058 db_.ListAvailableMetadata(metadata, id); |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2059 |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2060 for (std::list<MetadataType>::const_iterator |
1304 | 2061 it = metadata.begin(); it != metadata.end(); ++it) |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2062 { |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2063 std::string key = EnumerationToString(*it); |
1238 | 2064 |
2065 std::string value; | |
1247 | 2066 if (!db_.LookupMetadata(value, id, *it)) |
1238 | 2067 { |
2068 value.clear(); | |
2069 } | |
2070 | |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2071 target[key] = value; |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2072 } |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2073 |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2074 return true; |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2075 } |
1218
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
2076 |
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
2077 |
1249
40725595aaf0
Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1247
diff
changeset
|
2078 void ServerIndex::SetGlobalProperty(GlobalProperty property, |
40725595aaf0
Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1247
diff
changeset
|
2079 const std::string& value) |
40725595aaf0
Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1247
diff
changeset
|
2080 { |
40725595aaf0
Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1247
diff
changeset
|
2081 boost::mutex::scoped_lock lock(mutex_); |
40725595aaf0
Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1247
diff
changeset
|
2082 db_.SetGlobalProperty(property, value); |
40725595aaf0
Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1247
diff
changeset
|
2083 } |
40725595aaf0
Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1247
diff
changeset
|
2084 |
40725595aaf0
Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1247
diff
changeset
|
2085 |
1218
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
2086 std::string ServerIndex::GetGlobalProperty(GlobalProperty property, |
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
2087 const std::string& defaultValue) |
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
2088 { |
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
2089 boost::mutex::scoped_lock lock(mutex_); |
1239 | 2090 |
2091 std::string value; | |
1247 | 2092 if (db_.LookupGlobalProperty(value, property)) |
1239 | 2093 { |
2094 return value; | |
2095 } | |
2096 else | |
2097 { | |
2098 return defaultValue; | |
2099 } | |
1218
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
2100 } |
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
2101 |
1352 | 2102 |
2103 bool ServerIndex::GetMainDicomTags(DicomMap& result, | |
2104 const std::string& publicId, | |
1677
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2105 ResourceType expectedType, |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2106 ResourceType levelOfInterest) |
1352 | 2107 { |
1677
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2108 // Yes, the following test could be shortened, but we wish to make it as clear as possible |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2109 if (!(expectedType == ResourceType_Patient && levelOfInterest == ResourceType_Patient) && |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2110 !(expectedType == ResourceType_Study && levelOfInterest == ResourceType_Patient) && |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2111 !(expectedType == ResourceType_Study && levelOfInterest == ResourceType_Study) && |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2112 !(expectedType == ResourceType_Series && levelOfInterest == ResourceType_Series) && |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2113 !(expectedType == ResourceType_Instance && levelOfInterest == ResourceType_Instance)) |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2114 { |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2115 throw OrthancException(ErrorCode_ParameterOutOfRange); |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2116 } |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2117 |
1352 | 2118 result.Clear(); |
2119 | |
2120 boost::mutex::scoped_lock lock(mutex_); | |
2121 | |
2122 // Lookup for the requested resource | |
2123 int64_t id; | |
2124 ResourceType type; | |
2125 if (!db_.LookupResource(id, type, publicId) || | |
2126 type != expectedType) | |
2127 { | |
2128 return false; | |
2129 } | |
1677
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2130 |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2131 if (type == ResourceType_Study) |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2132 { |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2133 DicomMap tmp; |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2134 db_.GetMainDicomTags(tmp, id); |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2135 |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2136 switch (levelOfInterest) |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2137 { |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2138 case ResourceType_Patient: |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2139 tmp.ExtractPatientInformation(result); |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2140 result.SetValue(DICOM_TAG_PATIENT_ID, GetPatientIdOfStudy(db_, id)); |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2141 return true; |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2142 |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2143 case ResourceType_Study: |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2144 tmp.ExtractStudyInformation(result); |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2145 return true; |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2146 |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2147 default: |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2148 throw OrthancException(ErrorCode_InternalError); |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2149 } |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2150 } |
1352 | 2151 else |
2152 { | |
2153 db_.GetMainDicomTags(result, id); | |
2154 return true; | |
2155 } | |
2156 } | |
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2157 |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2158 |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2159 bool ServerIndex::LookupResourceType(ResourceType& type, |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2160 const std::string& publicId) |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2161 { |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2162 boost::mutex::scoped_lock lock(mutex_); |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2163 |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2164 int64_t id; |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2165 return db_.LookupResource(id, type, publicId); |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2166 } |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2167 |
1668
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2168 |
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2169 unsigned int ServerIndex::GetDatabaseVersion() |
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2170 { |
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2171 boost::mutex::scoped_lock lock(mutex_); |
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2172 return db_.GetDatabaseVersion(); |
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2173 } |
0 | 2174 } |