Mercurial > hg > orthanc
annotate Core/DicomFormat/DicomMap.cpp @ 947:c2c28dd17e87 query-retrieve
integration mainline -> query-retrieve
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
|---|---|
| date | Wed, 25 Jun 2014 12:09:38 +0200 |
| parents | 67e6400fca03 a811bdf8b8eb |
| children | 111e23bb4904 |
| rev | line source |
|---|---|
| 0 | 1 /** |
| 59 | 2 * Orthanc - A Lightweight, RESTful DICOM Store |
| 689 | 3 * Copyright (C) 2012-2014 Medical Physics Department, CHU of Liege, |
| 0 | 4 * Belgium |
| 5 * | |
| 6 * This program is free software: you can redistribute it and/or | |
| 7 * modify it under the terms of the GNU General Public License as | |
| 8 * published by the Free Software Foundation, either version 3 of the | |
| 9 * License, or (at your option) any later version. | |
| 136 | 10 * |
| 11 * In addition, as a special exception, the copyright holders of this | |
| 12 * program give permission to link the code of its release with the | |
| 13 * OpenSSL project's "OpenSSL" library (or with modified versions of it | |
| 14 * that use the same license as the "OpenSSL" library), and distribute | |
| 15 * the linked executables. You must obey the GNU General Public License | |
| 16 * in all respects for all of the code used other than "OpenSSL". If you | |
| 17 * modify file(s) with this exception, you may extend this exception to | |
| 18 * your version of the file(s), but you are not obligated to do so. If | |
| 19 * you do not wish to do so, delete this exception statement from your | |
| 20 * version. If you delete this exception statement from all source files | |
| 21 * in the program, then also delete it here. | |
| 0 | 22 * |
| 23 * This program is distributed in the hope that it will be useful, but | |
| 24 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
| 26 * General Public License for more details. | |
| 27 * | |
| 28 * You should have received a copy of the GNU General Public License | |
| 29 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
| 30 **/ | |
| 31 | |
| 32 | |
|
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33 #include "../PrecompiledHeaders.h" |
| 0 | 34 #include "DicomMap.h" |
| 35 | |
| 36 #include <stdio.h> | |
| 37 #include <memory> | |
| 38 #include "DicomString.h" | |
| 59 | 39 #include "../OrthancException.h" |
| 0 | 40 |
| 41 | |
| 59 | 42 namespace Orthanc |
| 0 | 43 { |
| 44 static DicomTag patientTags[] = | |
| 45 { | |
| 38 | 46 //DicomTag(0x0010, 0x1010), // PatientAge |
| 47 //DicomTag(0x0010, 0x1040) // PatientAddress | |
| 77 | 48 DicomTag(0x0010, 0x0010), // PatientName |
| 49 DicomTag(0x0010, 0x0030), // PatientBirthDate | |
| 50 DicomTag(0x0010, 0x0040), // PatientSex | |
| 51 DicomTag(0x0010, 0x1000), // OtherPatientIDs | |
| 80 | 52 DICOM_TAG_PATIENT_ID |
| 0 | 53 }; |
| 54 | |
| 55 static DicomTag studyTags[] = | |
| 56 { | |
| 38 | 57 //DicomTag(0x0010, 0x1020), // PatientSize |
| 58 //DicomTag(0x0010, 0x1030) // PatientWeight | |
| 77 | 59 DicomTag(0x0008, 0x0020), // StudyDate |
| 60 DicomTag(0x0008, 0x0030), // StudyTime | |
| 61 DicomTag(0x0008, 0x1030), // StudyDescription | |
| 62 DicomTag(0x0020, 0x0010), // StudyID | |
| 80 | 63 DICOM_TAG_ACCESSION_NUMBER, |
| 64 DICOM_TAG_STUDY_INSTANCE_UID | |
| 0 | 65 }; |
| 66 | |
| 67 static DicomTag seriesTags[] = | |
| 68 { | |
| 38 | 69 //DicomTag(0x0010, 0x1080), // MilitaryRank |
| 77 | 70 DicomTag(0x0008, 0x0021), // SeriesDate |
| 71 DicomTag(0x0008, 0x0031), // SeriesTime | |
| 72 DicomTag(0x0008, 0x0060), // Modality | |
| 73 DicomTag(0x0008, 0x0070), // Manufacturer | |
| 74 DicomTag(0x0008, 0x1010), // StationName | |
| 75 DicomTag(0x0008, 0x103e), // SeriesDescription | |
| 76 DicomTag(0x0018, 0x0015), // BodyPartExamined | |
| 77 DicomTag(0x0018, 0x0024), // SequenceName | |
| 78 DicomTag(0x0018, 0x1030), // ProtocolName | |
| 79 DicomTag(0x0020, 0x0011), // SeriesNumber | |
| 433 | 80 DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES, |
| 80 | 81 DICOM_TAG_IMAGES_IN_ACQUISITION, |
| 433 | 82 DICOM_TAG_NUMBER_OF_TEMPORAL_POSITIONS, |
| 80 | 83 DICOM_TAG_NUMBER_OF_SLICES, |
| 433 | 84 DICOM_TAG_NUMBER_OF_TIME_SLICES, |
| 80 | 85 DICOM_TAG_SERIES_INSTANCE_UID |
| 0 | 86 }; |
| 87 | |
| 88 static DicomTag instanceTags[] = | |
| 89 { | |
| 77 | 90 DicomTag(0x0008, 0x0012), // InstanceCreationDate |
| 91 DicomTag(0x0008, 0x0013), // InstanceCreationTime | |
| 92 DicomTag(0x0020, 0x0012), // AcquisitionNumber | |
| 80 | 93 DICOM_TAG_IMAGE_INDEX, |
| 94 DICOM_TAG_INSTANCE_NUMBER, | |
| 84 | 95 DICOM_TAG_NUMBER_OF_FRAMES, |
| 433 | 96 DICOM_TAG_TEMPORAL_POSITION_IDENTIFIER, |
| 80 | 97 DICOM_TAG_SOP_INSTANCE_UID |
| 0 | 98 }; |
| 99 | |
| 100 | |
| 101 | |
| 102 | |
| 103 void DicomMap::SetValue(uint16_t group, | |
| 104 uint16_t element, | |
| 105 DicomValue* value) | |
| 106 { | |
| 107 DicomTag tag(group, element); | |
| 108 Map::iterator it = map_.find(tag); | |
| 109 | |
| 110 if (it != map_.end()) | |
| 111 { | |
| 112 delete it->second; | |
| 113 it->second = value; | |
| 114 } | |
| 115 else | |
| 116 { | |
| 117 map_.insert(std::make_pair(tag, value)); | |
| 118 } | |
| 119 } | |
| 120 | |
| 121 void DicomMap::SetValue(DicomTag tag, | |
| 122 DicomValue* value) | |
| 123 { | |
| 124 SetValue(tag.GetGroup(), tag.GetElement(), value); | |
| 125 } | |
| 126 | |
| 127 | |
| 128 | |
| 129 | |
| 130 void DicomMap::Clear() | |
| 131 { | |
| 656 | 132 for (Map::iterator it = map_.begin(); it != map_.end(); ++it) |
| 0 | 133 { |
| 134 delete it->second; | |
| 135 } | |
| 136 | |
| 137 map_.clear(); | |
| 138 } | |
| 139 | |
| 140 | |
| 141 void DicomMap::ExtractTags(DicomMap& result, | |
| 142 const DicomTag* tags, | |
| 143 size_t count) const | |
| 144 { | |
| 145 result.Clear(); | |
| 146 | |
| 147 for (unsigned int i = 0; i < count; i++) | |
| 148 { | |
| 149 Map::const_iterator it = map_.find(tags[i]); | |
| 150 if (it != map_.end()) | |
| 151 { | |
| 152 result.SetValue(it->first, it->second->Clone()); | |
| 153 } | |
| 154 } | |
| 155 } | |
| 156 | |
| 157 | |
| 158 void DicomMap::ExtractPatientInformation(DicomMap& result) const | |
| 159 { | |
| 160 ExtractTags(result, patientTags, sizeof(patientTags) / sizeof(DicomTag)); | |
| 161 } | |
| 162 | |
| 163 void DicomMap::ExtractStudyInformation(DicomMap& result) const | |
| 164 { | |
| 165 ExtractTags(result, studyTags, sizeof(studyTags) / sizeof(DicomTag)); | |
| 166 } | |
| 167 | |
| 168 void DicomMap::ExtractSeriesInformation(DicomMap& result) const | |
| 169 { | |
| 170 ExtractTags(result, seriesTags, sizeof(seriesTags) / sizeof(DicomTag)); | |
| 171 } | |
| 172 | |
| 173 void DicomMap::ExtractInstanceInformation(DicomMap& result) const | |
| 174 { | |
| 175 ExtractTags(result, instanceTags, sizeof(instanceTags) / sizeof(DicomTag)); | |
| 176 } | |
| 177 | |
| 178 | |
| 80 | 179 |
| 0 | 180 DicomMap* DicomMap::Clone() const |
| 181 { | |
| 182 std::auto_ptr<DicomMap> result(new DicomMap); | |
| 183 | |
| 656 | 184 for (Map::const_iterator it = map_.begin(); it != map_.end(); ++it) |
| 0 | 185 { |
| 186 result->map_.insert(std::make_pair(it->first, it->second->Clone())); | |
| 187 } | |
| 188 | |
| 189 return result.release(); | |
| 190 } | |
| 191 | |
| 192 | |
| 193 const DicomValue& DicomMap::GetValue(const DicomTag& tag) const | |
| 194 { | |
| 80 | 195 const DicomValue* value = TestAndGetValue(tag); |
| 196 | |
| 197 if (value) | |
| 198 { | |
| 199 return *value; | |
| 200 } | |
| 201 else | |
| 202 { | |
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203 throw OrthancException(ErrorCode_InexistentTag); |
| 80 | 204 } |
| 205 } | |
| 206 | |
| 207 | |
| 208 const DicomValue* DicomMap::TestAndGetValue(const DicomTag& tag) const | |
| 209 { | |
| 0 | 210 Map::const_iterator it = map_.find(tag); |
| 211 | |
| 212 if (it == map_.end()) | |
| 213 { | |
| 80 | 214 return NULL; |
| 0 | 215 } |
| 216 else | |
| 217 { | |
| 80 | 218 return it->second; |
| 0 | 219 } |
| 220 } | |
| 221 | |
| 222 | |
| 223 void DicomMap::Remove(const DicomTag& tag) | |
| 224 { | |
| 225 Map::iterator it = map_.find(tag); | |
| 226 if (it != map_.end()) | |
| 227 { | |
| 228 delete it->second; | |
| 229 map_.erase(it); | |
| 230 } | |
| 231 } | |
| 232 | |
| 233 | |
| 234 static void SetupFindTemplate(DicomMap& result, | |
| 235 const DicomTag* tags, | |
| 236 size_t count) | |
| 237 { | |
| 238 result.Clear(); | |
| 239 | |
| 240 for (size_t i = 0; i < count; i++) | |
| 241 { | |
| 242 result.SetValue(tags[i], ""); | |
| 243 } | |
| 244 } | |
| 245 | |
| 246 void DicomMap::SetupFindPatientTemplate(DicomMap& result) | |
| 247 { | |
| 248 SetupFindTemplate(result, patientTags, sizeof(patientTags) / sizeof(DicomTag)); | |
| 249 } | |
| 250 | |
| 251 void DicomMap::SetupFindStudyTemplate(DicomMap& result) | |
| 252 { | |
| 253 SetupFindTemplate(result, studyTags, sizeof(studyTags) / sizeof(DicomTag)); | |
| 80 | 254 result.SetValue(DICOM_TAG_ACCESSION_NUMBER, ""); |
| 255 result.SetValue(DICOM_TAG_PATIENT_ID, ""); | |
| 0 | 256 } |
| 257 | |
| 258 void DicomMap::SetupFindSeriesTemplate(DicomMap& result) | |
| 259 { | |
| 260 SetupFindTemplate(result, seriesTags, sizeof(seriesTags) / sizeof(DicomTag)); | |
| 80 | 261 result.SetValue(DICOM_TAG_ACCESSION_NUMBER, ""); |
| 262 result.SetValue(DICOM_TAG_PATIENT_ID, ""); | |
| 263 result.SetValue(DICOM_TAG_STUDY_INSTANCE_UID, ""); | |
| 0 | 264 } |
| 265 | |
| 266 void DicomMap::SetupFindInstanceTemplate(DicomMap& result) | |
| 267 { | |
| 268 SetupFindTemplate(result, instanceTags, sizeof(instanceTags) / sizeof(DicomTag)); | |
| 80 | 269 result.SetValue(DICOM_TAG_ACCESSION_NUMBER, ""); |
| 270 result.SetValue(DICOM_TAG_PATIENT_ID, ""); | |
| 271 result.SetValue(DICOM_TAG_STUDY_INSTANCE_UID, ""); | |
| 272 result.SetValue(DICOM_TAG_SERIES_INSTANCE_UID, ""); | |
| 0 | 273 } |
| 274 | |
| 275 | |
| 276 void DicomMap::CopyTagIfExists(const DicomMap& source, | |
| 277 const DicomTag& tag) | |
| 278 { | |
| 279 if (source.HasTag(tag)) | |
| 280 { | |
| 281 SetValue(tag, source.GetValue(tag)); | |
| 282 } | |
| 283 } | |
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284 |
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285 |
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286 bool DicomMap::IsMainDicomTag(const DicomTag& tag, ResourceType level) |
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287 { |
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288 DicomTag *tags = NULL; |
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289 size_t size; |
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290 |
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291 switch (level) |
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292 { |
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293 case ResourceType_Patient: |
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294 tags = patientTags; |
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295 size = sizeof(patientTags) / sizeof(DicomTag); |
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296 break; |
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297 |
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298 case ResourceType_Study: |
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299 tags = studyTags; |
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300 size = sizeof(studyTags) / sizeof(DicomTag); |
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301 break; |
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302 |
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303 case ResourceType_Series: |
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304 tags = seriesTags; |
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305 size = sizeof(seriesTags) / sizeof(DicomTag); |
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306 break; |
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307 |
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308 case ResourceType_Instance: |
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309 tags = instanceTags; |
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310 size = sizeof(instanceTags) / sizeof(DicomTag); |
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311 break; |
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312 |
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313 default: |
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314 throw OrthancException(ErrorCode_ParameterOutOfRange); |
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315 } |
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316 |
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317 for (size_t i = 0; i < size; i++) |
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318 { |
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319 if (tags[i] == tag) |
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320 { |
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321 return true; |
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322 } |
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323 } |
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324 |
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325 return false; |
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326 } |
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327 |
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328 bool DicomMap::IsMainDicomTag(const DicomTag& tag) |
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329 { |
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330 return (IsMainDicomTag(tag, ResourceType_Patient) || |
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331 IsMainDicomTag(tag, ResourceType_Study) || |
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332 IsMainDicomTag(tag, ResourceType_Series) || |
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333 IsMainDicomTag(tag, ResourceType_Instance)); |
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334 } |
| 567 | 335 |
| 336 | |
| 337 void DicomMap::GetMainDicomTagsInternal(std::set<DicomTag>& result, ResourceType level) | |
| 338 { | |
| 339 DicomTag *tags = NULL; | |
| 340 size_t size; | |
| 341 | |
| 342 switch (level) | |
| 343 { | |
| 344 case ResourceType_Patient: | |
| 345 tags = patientTags; | |
| 346 size = sizeof(patientTags) / sizeof(DicomTag); | |
| 347 break; | |
| 348 | |
| 349 case ResourceType_Study: | |
| 350 tags = studyTags; | |
| 351 size = sizeof(studyTags) / sizeof(DicomTag); | |
| 352 break; | |
| 353 | |
| 354 case ResourceType_Series: | |
| 355 tags = seriesTags; | |
| 356 size = sizeof(seriesTags) / sizeof(DicomTag); | |
| 357 break; | |
| 358 | |
| 359 case ResourceType_Instance: | |
| 360 tags = instanceTags; | |
| 361 size = sizeof(instanceTags) / sizeof(DicomTag); | |
| 362 break; | |
| 363 | |
| 364 default: | |
| 365 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
| 366 } | |
| 367 | |
| 368 for (size_t i = 0; i < size; i++) | |
| 369 { | |
| 370 result.insert(tags[i]); | |
| 371 } | |
| 372 } | |
| 373 | |
| 374 | |
| 375 void DicomMap::GetMainDicomTags(std::set<DicomTag>& result, ResourceType level) | |
| 376 { | |
| 377 result.clear(); | |
| 378 GetMainDicomTagsInternal(result, level); | |
| 379 } | |
| 380 | |
| 381 | |
| 382 void DicomMap::GetMainDicomTags(std::set<DicomTag>& result) | |
| 383 { | |
| 384 result.clear(); | |
| 385 GetMainDicomTagsInternal(result, ResourceType_Patient); | |
| 386 GetMainDicomTagsInternal(result, ResourceType_Study); | |
| 387 GetMainDicomTagsInternal(result, ResourceType_Series); | |
| 388 GetMainDicomTagsInternal(result, ResourceType_Instance); | |
| 389 } | |
|
681
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390 |
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391 |
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392 void DicomMap::ExtractMainDicomTagsForLevel(DicomMap& result, |
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393 ResourceType level) const |
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394 { |
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395 switch (level) |
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396 { |
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397 case ResourceType_Patient: |
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398 ExtractPatientInformation(result); |
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399 break; |
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400 |
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401 case ResourceType_Study: |
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402 ExtractStudyInformation(result); |
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403 break; |
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404 |
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405 case ResourceType_Series: |
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406 ExtractSeriesInformation(result); |
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407 break; |
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408 |
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409 case ResourceType_Instance: |
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410 ExtractInstanceInformation(result); |
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411 break; |
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412 |
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413 default: |
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414 throw OrthancException(ErrorCode_ParameterOutOfRange); |
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415 } |
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416 } |
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417 |
| 0 | 418 } |