Mercurial > hg > orthanc
annotate OrthancFramework/Sources/DicomNetworking/DicomStoreUserConnection.cpp @ 4119:bf7b9edf6b81 framework-lgpl
re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Tue, 07 Jul 2020 19:17:56 +0200 |
parents | d25f4c0fa160 |
children | d2f79a475b51 |
rev | line source |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium |
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6 * |
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7 * This program is free software: you can redistribute it and/or |
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8 * modify it under the terms of the GNU Lesser General Public License |
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9 * as published by the Free Software Foundation, either version 3 of |
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10 * the License, or (at your option) any later version. |
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11 * |
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12 * This program is distributed in the hope that it will be useful, but |
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13 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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15 * Lesser General Public License for more details. |
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16 * |
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17 * You should have received a copy of the GNU Lesser General Public |
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18 * License along with this program. If not, see |
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19 * <http://www.gnu.org/licenses/>. |
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20 **/ |
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21 |
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22 |
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23 #include "../PrecompiledHeaders.h" |
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24 #include "DicomStoreUserConnection.h" |
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26 #include "../DicomParsing/FromDcmtkBridge.h" |
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27 #include "../DicomParsing/ParsedDicomFile.h" |
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28 #include "../Logging.h" |
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29 #include "../OrthancException.h" |
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30 #include "DicomAssociation.h" |
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31 |
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32 #include <dcmtk/dcmdata/dcdeftag.h> |
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33 |
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34 |
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35 namespace Orthanc |
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36 { |
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37 bool DicomStoreUserConnection::ProposeStorageClass(const std::string& sopClassUid, |
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38 const std::set<DicomTransferSyntax>& syntaxes) |
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39 { |
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40 // Default transfer syntax for DICOM |
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41 const bool addLittleEndianImplicit = ( |
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42 proposeUncompressedSyntaxes_ && |
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43 syntaxes.find(DicomTransferSyntax_LittleEndianImplicit) == syntaxes.end()); |
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44 |
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45 const bool addLittleEndianExplicit = ( |
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46 proposeUncompressedSyntaxes_ && |
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47 syntaxes.find(DicomTransferSyntax_LittleEndianExplicit) == syntaxes.end()); |
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48 |
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49 const bool addBigEndianExplicit = ( |
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50 proposeUncompressedSyntaxes_ && |
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51 proposeRetiredBigEndian_ && |
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52 syntaxes.find(DicomTransferSyntax_BigEndianExplicit) == syntaxes.end()); |
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53 |
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54 size_t requiredCount = syntaxes.size(); |
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55 if (addLittleEndianImplicit) |
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56 { |
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57 requiredCount += 1; |
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58 } |
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59 |
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60 if (addLittleEndianExplicit || |
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61 addBigEndianExplicit) |
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62 { |
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63 requiredCount += 1; |
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64 } |
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65 |
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66 if (association_->GetRemainingPropositions() <= requiredCount) |
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67 { |
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68 return false; // Not enough room |
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69 } |
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70 else |
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71 { |
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72 for (std::set<DicomTransferSyntax>::const_iterator |
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73 it = syntaxes.begin(); it != syntaxes.end(); ++it) |
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74 { |
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75 association_->ProposePresentationContext(sopClassUid, *it); |
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76 proposedOriginalClasses_.insert(std::make_pair(sopClassUid, *it)); |
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77 } |
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78 |
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79 if (addLittleEndianImplicit) |
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80 { |
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81 association_->ProposePresentationContext(sopClassUid, DicomTransferSyntax_LittleEndianImplicit); |
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82 proposedOriginalClasses_.insert(std::make_pair(sopClassUid, DicomTransferSyntax_LittleEndianImplicit)); |
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83 } |
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84 |
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85 if (addLittleEndianExplicit || |
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86 addBigEndianExplicit) |
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87 { |
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88 std::set<DicomTransferSyntax> uncompressed; |
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89 |
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90 if (addLittleEndianExplicit) |
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91 { |
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92 uncompressed.insert(DicomTransferSyntax_LittleEndianExplicit); |
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93 } |
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94 |
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95 if (addBigEndianExplicit) |
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96 { |
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97 uncompressed.insert(DicomTransferSyntax_BigEndianExplicit); |
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98 } |
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99 |
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100 association_->ProposePresentationContext(sopClassUid, uncompressed); |
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101 |
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102 assert(!uncompressed.empty()); |
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103 if (addLittleEndianExplicit ^ addBigEndianExplicit) |
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104 { |
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105 // Only one transfer syntax was proposed for this presentation context |
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106 assert(uncompressed.size() == 1); |
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107 proposedOriginalClasses_.insert(std::make_pair(sopClassUid, *uncompressed.begin())); |
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108 } |
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109 } |
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110 |
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111 return true; |
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112 } |
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113 } |
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114 |
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115 |
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116 bool DicomStoreUserConnection::LookupPresentationContext( |
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117 uint8_t& presentationContextId, |
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118 const std::string& sopClassUid, |
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119 DicomTransferSyntax transferSyntax) |
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120 { |
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121 typedef std::map<DicomTransferSyntax, uint8_t> PresentationContexts; |
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122 |
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123 PresentationContexts pc; |
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124 if (association_->IsOpen() && |
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125 association_->LookupAcceptedPresentationContext(pc, sopClassUid)) |
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126 { |
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127 PresentationContexts::const_iterator found = pc.find(transferSyntax); |
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128 if (found != pc.end()) |
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129 { |
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130 presentationContextId = found->second; |
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131 return true; |
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132 } |
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133 } |
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134 |
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135 return false; |
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136 } |
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137 |
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138 |
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139 DicomStoreUserConnection::DicomStoreUserConnection( |
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140 const DicomAssociationParameters& params) : |
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141 parameters_(params), |
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142 association_(new DicomAssociation), |
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143 proposeCommonClasses_(true), |
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144 proposeUncompressedSyntaxes_(true), |
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145 proposeRetiredBigEndian_(false) |
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146 { |
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147 } |
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148 |
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149 |
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150 void DicomStoreUserConnection::RegisterStorageClass(const std::string& sopClassUid, |
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151 DicomTransferSyntax syntax) |
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152 { |
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154 |
3879 | 155 if (found == registeredClasses_.end()) |
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156 { |
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157 std::set<DicomTransferSyntax> ts; |
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158 ts.insert(syntax); |
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160 } |
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161 else |
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162 { |
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163 found->second.insert(syntax); |
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164 } |
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165 } |
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166 |
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167 |
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168 void DicomStoreUserConnection::LookupParameters(std::string& sopClassUid, |
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169 std::string& sopInstanceUid, |
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170 DicomTransferSyntax& transferSyntax, |
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171 DcmFileFormat& dicom) |
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172 { |
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173 if (dicom.getDataset() == NULL) |
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174 { |
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175 throw OrthancException(ErrorCode_InternalError); |
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176 } |
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177 |
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178 OFString a, b; |
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179 if (!dicom.getDataset()->findAndGetOFString(DCM_SOPClassUID, a).good() || |
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180 !dicom.getDataset()->findAndGetOFString(DCM_SOPInstanceUID, b).good()) |
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181 { |
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182 throw OrthancException(ErrorCode_NoSopClassOrInstance, |
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183 "Unable to determine the SOP class/instance for C-STORE with AET " + |
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184 parameters_.GetRemoteModality().GetApplicationEntityTitle()); |
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185 } |
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186 |
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187 sopClassUid.assign(a.c_str()); |
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188 sopInstanceUid.assign(b.c_str()); |
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189 |
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190 if (!FromDcmtkBridge::LookupOrthancTransferSyntax(transferSyntax, dicom)) |
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191 { |
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192 throw OrthancException(ErrorCode_InternalError, |
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193 "Unknown transfer syntax from DCMTK"); |
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194 } |
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195 } |
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196 |
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197 |
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198 bool DicomStoreUserConnection::NegotiatePresentationContext( |
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199 uint8_t& presentationContextId, |
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200 const std::string& sopClassUid, |
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201 DicomTransferSyntax transferSyntax) |
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202 { |
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203 /** |
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204 * Step 1: Check whether this presentation context is already |
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205 * available in the previously negotiated assocation. |
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206 **/ |
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207 |
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208 if (LookupPresentationContext(presentationContextId, sopClassUid, transferSyntax)) |
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209 { |
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210 return true; |
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211 } |
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212 |
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213 // The association must be re-negotiated |
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214 if (association_->IsOpen()) |
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215 { |
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216 LOG(INFO) << "Re-negotiating DICOM association with " |
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217 << parameters_.GetRemoteModality().GetApplicationEntityTitle(); |
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218 |
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219 if (proposedOriginalClasses_.find(std::make_pair(sopClassUid, transferSyntax)) != |
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220 proposedOriginalClasses_.end()) |
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221 { |
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222 LOG(INFO) << "The remote modality has already rejected SOP class UID \"" |
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223 << sopClassUid << "\" with transfer syntax \"" |
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224 << GetTransferSyntaxUid(transferSyntax) << "\", don't renegotiate"; |
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225 return false; |
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226 } |
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227 } |
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228 |
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229 association_->ClearPresentationContexts(); |
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230 proposedOriginalClasses_.clear(); |
3879 | 231 RegisterStorageClass(sopClassUid, transferSyntax); // (*) |
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232 |
3879 | 233 |
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234 /** |
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235 * Step 2: Propose at least the mandatory SOP class. |
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236 **/ |
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237 |
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238 { |
3879 | 239 RegisteredClasses::const_iterator mandatory = registeredClasses_.find(sopClassUid); |
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240 |
3879 | 241 if (mandatory == registeredClasses_.end() || |
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242 mandatory->second.find(transferSyntax) == mandatory->second.end()) |
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243 { |
3879 | 244 // Should never fail because of (*) |
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245 throw OrthancException(ErrorCode_InternalError); |
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246 } |
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247 |
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248 if (!ProposeStorageClass(sopClassUid, mandatory->second)) |
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249 { |
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250 // Should never happen in real life: There are no more than |
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251 // 128 transfer syntaxes in DICOM! |
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252 throw OrthancException(ErrorCode_InternalError, |
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253 "Too many transfer syntaxes for SOP class UID: " + sopClassUid); |
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254 } |
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255 } |
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256 |
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257 |
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258 /** |
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259 * Step 3: Propose all the previously spotted SOP classes, as |
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260 * registered through the "RegisterStorageClass()" method. |
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261 **/ |
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262 |
3879 | 263 for (RegisteredClasses::const_iterator it = registeredClasses_.begin(); |
264 it != registeredClasses_.end(); ++it) | |
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265 { |
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266 if (it->first != sopClassUid) |
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267 { |
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268 ProposeStorageClass(it->first, it->second); |
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269 } |
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270 } |
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271 |
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272 |
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273 /** |
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274 * Step 4: As long as there is room left in the proposed |
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275 * presentation contexts, propose the uncompressed transfer syntaxes |
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276 * for the most common SOP classes, as can be found in the |
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277 * "dcmShortSCUStorageSOPClassUIDs" array from DCMTK. The |
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278 * preferred transfer syntax is "LittleEndianImplicit". |
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279 **/ |
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280 |
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281 if (proposeCommonClasses_) |
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282 { |
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283 // The method "ProposeStorageClass()" will automatically add |
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284 // "LittleEndianImplicit" |
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285 std::set<DicomTransferSyntax> ts; |
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286 |
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287 for (int i = 0; i < numberOfDcmShortSCUStorageSOPClassUIDs; i++) |
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288 { |
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289 std::string c(dcmShortSCUStorageSOPClassUIDs[i]); |
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290 |
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291 if (c != sopClassUid && |
3879 | 292 registeredClasses_.find(c) == registeredClasses_.end()) |
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293 { |
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294 ProposeStorageClass(c, ts); |
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295 } |
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296 } |
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297 } |
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298 |
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299 |
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300 /** |
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301 * Step 5: Open the association, and check whether the pair (SOP |
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302 * class UID, transfer syntax) was accepted by the remote host. |
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303 **/ |
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304 |
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305 association_->Open(parameters_); |
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306 return LookupPresentationContext(presentationContextId, sopClassUid, transferSyntax); |
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307 } |
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308 |
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309 |
3881 | 310 void DicomStoreUserConnection::Store(std::string& sopClassUid, |
311 std::string& sopInstanceUid, | |
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312 DcmFileFormat& dicom, |
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313 bool hasMoveOriginator, |
3881 | 314 const std::string& moveOriginatorAET, |
315 uint16_t moveOriginatorID) | |
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316 { |
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317 DicomTransferSyntax transferSyntax; |
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318 LookupParameters(sopClassUid, sopInstanceUid, transferSyntax, dicom); |
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319 |
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320 uint8_t presID; |
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321 if (!NegotiatePresentationContext(presID, sopClassUid, transferSyntax)) |
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322 { |
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323 throw OrthancException(ErrorCode_NetworkProtocol, |
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324 "No valid presentation context was negotiated for " |
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325 "SOP class UID [" + sopClassUid + "] and transfer " |
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326 "syntax [" + GetTransferSyntaxUid(transferSyntax) + "] " |
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327 "while sending to modality [" + |
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328 parameters_.GetRemoteModality().GetApplicationEntityTitle() + "]"); |
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329 } |
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330 |
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331 // Prepare the transmission of data |
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332 T_DIMSE_C_StoreRQ request; |
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333 memset(&request, 0, sizeof(request)); |
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334 request.MessageID = association_->GetDcmtkAssociation().nextMsgID++; |
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335 strncpy(request.AffectedSOPClassUID, sopClassUid.c_str(), DIC_UI_LEN); |
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336 request.Priority = DIMSE_PRIORITY_MEDIUM; |
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337 request.DataSetType = DIMSE_DATASET_PRESENT; |
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338 strncpy(request.AffectedSOPInstanceUID, sopInstanceUid.c_str(), DIC_UI_LEN); |
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339 |
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340 if (hasMoveOriginator) |
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341 { |
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342 strncpy(request.MoveOriginatorApplicationEntityTitle, |
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343 moveOriginatorAET.c_str(), DIC_AE_LEN); |
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344 request.opts = O_STORE_MOVEORIGINATORAETITLE; |
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345 |
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346 request.MoveOriginatorID = moveOriginatorID; // The type DIC_US is an alias for uint16_t |
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347 request.opts |= O_STORE_MOVEORIGINATORID; |
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348 } |
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349 |
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350 if (dicom.getDataset() == NULL) |
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351 { |
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352 throw OrthancException(ErrorCode_InternalError); |
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353 } |
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354 |
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355 // Finally conduct transmission of data |
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356 T_DIMSE_C_StoreRSP response; |
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357 DcmDataset* statusDetail = NULL; |
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358 DicomAssociation::CheckCondition( |
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359 DIMSE_storeUser(&association_->GetDcmtkAssociation(), presID, &request, |
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360 NULL, dicom.getDataset(), /*progressCallback*/ NULL, NULL, |
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361 /*opt_blockMode*/ (GetParameters().HasTimeout() ? DIMSE_NONBLOCKING : DIMSE_BLOCKING), |
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362 /*opt_dimse_timeout*/ GetParameters().GetTimeout(), |
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363 &response, &statusDetail, NULL), |
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364 GetParameters(), "C-STORE"); |
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365 |
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366 if (statusDetail != NULL) |
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367 { |
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368 delete statusDetail; |
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369 } |
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370 |
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371 /** |
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372 * New in Orthanc 1.6.0: Deal with failures during C-STORE. |
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373 * http://dicom.nema.org/medical/dicom/current/output/chtml/part04/sect_B.2.3.html#table_B.2-1 |
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374 **/ |
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375 |
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376 if (response.DimseStatus != 0x0000 && // Success |
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377 response.DimseStatus != 0xB000 && // Warning - Coercion of Data Elements |
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378 response.DimseStatus != 0xB007 && // Warning - Data Set does not match SOP Class |
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379 response.DimseStatus != 0xB006) // Warning - Elements Discarded |
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380 { |
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381 char buf[16]; |
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382 sprintf(buf, "%04X", response.DimseStatus); |
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383 throw OrthancException(ErrorCode_NetworkProtocol, |
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384 "C-STORE SCU to AET \"" + |
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385 GetParameters().GetRemoteModality().GetApplicationEntityTitle() + |
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386 "\" has failed with DIMSE status 0x" + buf); |
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387 } |
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388 } |
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389 |
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390 |
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391 void DicomStoreUserConnection::Store(std::string& sopClassUid, |
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392 std::string& sopInstanceUid, |
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393 const void* buffer, |
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394 size_t size, |
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395 bool hasMoveOriginator, |
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396 const std::string& moveOriginatorAET, |
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397 uint16_t moveOriginatorID) |
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398 { |
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399 std::unique_ptr<DcmFileFormat> dicom( |
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400 FromDcmtkBridge::LoadFromMemoryBuffer(buffer, size)); |
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401 |
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402 if (dicom.get() == NULL) |
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403 { |
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404 throw OrthancException(ErrorCode_InternalError); |
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405 } |
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406 |
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407 Store(sopClassUid, sopInstanceUid, *dicom, hasMoveOriginator, moveOriginatorAET, moveOriginatorID); |
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408 } |
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409 |
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410 |
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411 void DicomStoreUserConnection::LookupTranscoding(std::set<DicomTransferSyntax>& acceptedSyntaxes, |
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412 const std::string& sopClassUid, |
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413 DicomTransferSyntax sourceSyntax) |
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414 { |
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415 acceptedSyntaxes.clear(); |
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416 |
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417 // Make sure a negotiation has already occurred for this transfer |
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418 // syntax. We don't use the return code: Transcoding is possible |
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419 // even if the "sourceSyntax" is not supported. |
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420 uint8_t presID; |
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421 NegotiatePresentationContext(presID, sopClassUid, sourceSyntax); |
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422 |
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423 std::map<DicomTransferSyntax, uint8_t> contexts; |
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424 if (association_->LookupAcceptedPresentationContext(contexts, sopClassUid)) |
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425 { |
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426 for (std::map<DicomTransferSyntax, uint8_t>::const_iterator |
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427 it = contexts.begin(); it != contexts.end(); ++it) |
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428 { |
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429 acceptedSyntaxes.insert(it->first); |
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430 } |
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431 } |
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432 } |
3893 | 433 |
434 | |
435 void DicomStoreUserConnection::Transcode(std::string& sopClassUid /* out */, | |
436 std::string& sopInstanceUid /* out */, | |
437 IDicomTranscoder& transcoder, | |
438 const void* buffer, | |
439 size_t size, | |
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440 bool hasMoveOriginator, |
3893 | 441 const std::string& moveOriginatorAET, |
442 uint16_t moveOriginatorID) | |
443 { | |
444 std::unique_ptr<DcmFileFormat> dicom(FromDcmtkBridge::LoadFromMemoryBuffer(buffer, size)); | |
445 if (dicom.get() == NULL || | |
446 dicom->getDataset() == NULL) | |
447 { | |
448 throw OrthancException(ErrorCode_NullPointer); | |
449 } | |
450 | |
451 DicomTransferSyntax inputSyntax; | |
452 LookupParameters(sopClassUid, sopInstanceUid, inputSyntax, *dicom); | |
453 | |
454 std::set<DicomTransferSyntax> accepted; | |
455 LookupTranscoding(accepted, sopClassUid, inputSyntax); | |
456 | |
457 if (accepted.find(inputSyntax) != accepted.end()) | |
458 { | |
459 // No need for transcoding | |
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460 Store(sopClassUid, sopInstanceUid, *dicom, |
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461 hasMoveOriginator, moveOriginatorAET, moveOriginatorID); |
3893 | 462 } |
463 else | |
464 { | |
465 // Transcoding is needed | |
466 std::set<DicomTransferSyntax> uncompressedSyntaxes; | |
467 | |
468 if (accepted.find(DicomTransferSyntax_LittleEndianImplicit) != accepted.end()) | |
469 { | |
470 uncompressedSyntaxes.insert(DicomTransferSyntax_LittleEndianImplicit); | |
471 } | |
472 | |
473 if (accepted.find(DicomTransferSyntax_LittleEndianExplicit) != accepted.end()) | |
474 { | |
475 uncompressedSyntaxes.insert(DicomTransferSyntax_LittleEndianExplicit); | |
476 } | |
477 | |
478 if (accepted.find(DicomTransferSyntax_BigEndianExplicit) != accepted.end()) | |
479 { | |
480 uncompressedSyntaxes.insert(DicomTransferSyntax_BigEndianExplicit); | |
481 } | |
482 | |
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simplified IDicomTranscoder
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483 IDicomTranscoder::DicomImage source; |
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484 source.AcquireParsed(dicom.release()); |
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485 source.SetExternalBuffer(buffer, size); |
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486 |
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487 const std::string sourceUid = IDicomTranscoder::GetSopInstanceUid(source.GetParsed()); |
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488 |
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simplified IDicomTranscoder
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parents:
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489 IDicomTranscoder::DicomImage transcoded; |
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490 if (transcoder.Transcode(transcoded, source, uncompressedSyntaxes, false)) |
3893 | 491 { |
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492 if (sourceUid != IDicomTranscoder::GetSopInstanceUid(transcoded.GetParsed())) |
3893 | 493 { |
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494 throw OrthancException(ErrorCode_Plugin, "The transcoder has changed the SOP " |
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495 "instance UID while transcoding to an uncompressed transfer syntax"); |
3893 | 496 } |
497 else | |
498 { | |
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499 DicomTransferSyntax transcodedSyntax; |
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simplified IDicomTranscoder
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parents:
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500 |
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parents:
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501 // Sanity check |
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502 if (!FromDcmtkBridge::LookupOrthancTransferSyntax(transcodedSyntax, transcoded.GetParsed()) || |
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503 accepted.find(transcodedSyntax) == accepted.end()) |
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504 { |
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parents:
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505 throw OrthancException(ErrorCode_InternalError); |
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506 } |
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507 else |
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508 { |
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simplified IDicomTranscoder
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509 Store(sopClassUid, sopInstanceUid, transcoded.GetParsed(), |
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510 hasMoveOriginator, moveOriginatorAET, moveOriginatorID); |
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511 } |
3893 | 512 } |
513 } | |
514 } | |
515 } | |
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516 } |