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annotate OrthancServer/Sources/Database/Upgrade4To5.sql @ 4834:bec432ee1094

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download of numpy arrays from the REST API
author Sebastien Jodogne <s.jodogne@gmail.com>
date Fri, 26 Nov 2021 19:03:32 +0100
parents 7053502fbf97
children 2e71a08eea15 43e613a7756b
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1 -- Orthanc - A Lightweight, RESTful DICOM Store
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2 -- Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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3 -- Department, University Hospital of Liege, Belgium
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4 -- Copyright (C) 2017-2021 Osimis S.A., Belgium
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5 -- Copyright (C) 2021-2021 Sebastien Jodogne, ICTEAM UCLouvain, Belgium
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6 --
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7 -- This program is free software: you can redistribute it and/or
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8 -- modify it under the terms of the GNU General Public License as
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9 -- published by the Free Software Foundation, either version 3 of the
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10 -- License, or (at your option) any later version.
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11 --
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12 -- In addition, as a special exception, the copyright holders of this
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13 -- program give permission to link the code of its release with the
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14 -- OpenSSL project's "OpenSSL" library (or with modified versions of it
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15 -- that use the same license as the "OpenSSL" library), and distribute
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16 -- the linked executables. You must obey the GNU General Public License
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17 -- in all respects for all of the code used other than "OpenSSL". If you
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18 -- modify file(s) with this exception, you may extend this exception to
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19 -- your version of the file(s), but you are not obligated to do so. If
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20 -- you do not wish to do so, delete this exception statement from your
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21 -- version. If you delete this exception statement from all source files
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22 -- in the program, then also delete it here.
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23 --
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24 -- This program is distributed in the hope that it will be useful, but
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25 -- WITHOUT ANY WARRANTY; without even the implied warranty of
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26 -- MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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27 -- General Public License for more details.
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28 --
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29 -- You should have received a copy of the GNU General Public License
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30 -- along with this program. If not, see <http://www.gnu.org/licenses/>.
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32
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33 --
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34 -- This SQLite script updates the version of the Orthanc database from 4 to 5.
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35 --
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36
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37
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38 -- Remove 2 indexes to speed up
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39
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40 DROP INDEX MainDicomTagsIndex2;
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41 DROP INDEX MainDicomTagsIndexValues;
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42
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43
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44 -- Add a new table to index the DICOM identifiers
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45
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46 CREATE TABLE DicomIdentifiers(
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47 id INTEGER REFERENCES Resources(internalId) ON DELETE CASCADE,
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48 tagGroup INTEGER,
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49 tagElement INTEGER,
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50 value TEXT,
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51 PRIMARY KEY(id, tagGroup, tagElement)
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52 );
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53
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54 CREATE INDEX DicomIdentifiersIndex1 ON DicomIdentifiers(id);
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55 CREATE INDEX DicomIdentifiersIndex2 ON DicomIdentifiers(tagGroup, tagElement);
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56 CREATE INDEX DicomIdentifiersIndexValues ON DicomIdentifiers(value COLLATE BINARY);
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59 -- Migrate data from MainDicomTags to MainResourcesTags and MainInstancesTags
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60
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61 INSERT INTO DicomIdentifiers SELECT * FROM MainDicomTags
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62 WHERE ((tagGroup = 16 AND tagElement = 32) OR -- PatientID (0x0010, 0x0020)
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63 (tagGroup = 32 AND tagElement = 13) OR -- StudyInstanceUID (0x0020, 0x000d)
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64 (tagGroup = 8 AND tagElement = 80) OR -- AccessionNumber (0x0008, 0x0050)
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65 (tagGroup = 32 AND tagElement = 14) OR -- SeriesInstanceUID (0x0020, 0x000e)
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66 (tagGroup = 8 AND tagElement = 24)); -- SOPInstanceUID (0x0008, 0x0018)
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67
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68 DELETE FROM MainDicomTags
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69 WHERE ((tagGroup = 16 AND tagElement = 32) OR -- PatientID (0x0010, 0x0020)
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70 (tagGroup = 32 AND tagElement = 13) OR -- StudyInstanceUID (0x0020, 0x000d)
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71 (tagGroup = 8 AND tagElement = 80) OR -- AccessionNumber (0x0008, 0x0050)
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72 (tagGroup = 32 AND tagElement = 14) OR -- SeriesInstanceUID (0x0020, 0x000e)
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73 (tagGroup = 8 AND tagElement = 24)); -- SOPInstanceUID (0x0008, 0x0018)
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76 -- Upgrade the "ResourceDeleted" trigger
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77
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78 DROP TRIGGER ResourceDeleted;
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79 DROP TRIGGER ResourceDeletedParentCleaning;
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80
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81 CREATE TRIGGER ResourceDeleted
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82 AFTER DELETE ON Resources
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83 BEGIN
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84 SELECT SignalResourceDeleted(old.publicId, old.resourceType);
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85 SELECT SignalRemainingAncestor(parent.publicId, parent.resourceType)
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86 FROM Resources AS parent WHERE internalId = old.parentId;
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87 END;
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88
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89 CREATE TRIGGER ResourceDeletedParentCleaning
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90 AFTER DELETE ON Resources
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91 FOR EACH ROW WHEN (SELECT COUNT(*) FROM Resources WHERE parentId = old.parentId) = 0
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92 BEGIN
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93 DELETE FROM Resources WHERE internalId = old.parentId;
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94 END;
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97 -- Change the database version
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98 -- The "1" corresponds to the "GlobalProperty_DatabaseSchemaVersion" enumeration
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99
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100 UPDATE GlobalProperties SET value="5" WHERE property=1;