Mercurial > hg > orthanc
annotate Core/DicomNetworking/DicomStoreUserConnection.cpp @ 3841:be7df7fe3d80
avoid one memcpy of the DICOM buffer on "POST /instances"
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Thu, 16 Apr 2020 16:58:37 +0200 |
parents | 83ea6939293d |
children | 594263db316a |
rev | line source |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium |
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6 * |
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7 * This program is free software: you can redistribute it and/or |
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8 * modify it under the terms of the GNU General Public License as |
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9 * published by the Free Software Foundation, either version 3 of the |
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10 * License, or (at your option) any later version. |
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11 * |
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12 * In addition, as a special exception, the copyright holders of this |
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13 * program give permission to link the code of its release with the |
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14 * OpenSSL project's "OpenSSL" library (or with modified versions of it |
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15 * that use the same license as the "OpenSSL" library), and distribute |
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16 * the linked executables. You must obey the GNU General Public License |
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17 * in all respects for all of the code used other than "OpenSSL". If you |
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18 * modify file(s) with this exception, you may extend this exception to |
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19 * your version of the file(s), but you are not obligated to do so. If |
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20 * you do not wish to do so, delete this exception statement from your |
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21 * version. If you delete this exception statement from all source files |
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22 * in the program, then also delete it here. |
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23 * |
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24 * This program is distributed in the hope that it will be useful, but |
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25 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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27 * General Public License for more details. |
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28 * |
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29 * You should have received a copy of the GNU General Public License |
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30 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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31 **/ |
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32 |
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33 |
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34 #include "../PrecompiledHeaders.h" |
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35 #include "DicomStoreUserConnection.h" |
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36 |
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37 #include "../DicomParsing/FromDcmtkBridge.h" |
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38 #include "../DicomParsing/ParsedDicomFile.h" |
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39 #include "../Logging.h" |
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40 #include "../OrthancException.h" |
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41 #include "DicomAssociation.h" |
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42 |
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43 #include <dcmtk/dcmdata/dcdeftag.h> |
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44 |
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45 |
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46 namespace Orthanc |
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47 { |
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48 bool DicomStoreUserConnection::ProposeStorageClass(const std::string& sopClassUid, |
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49 const std::set<DicomTransferSyntax>& syntaxes) |
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50 { |
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51 size_t requiredCount = syntaxes.size(); |
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52 if (proposeUncompressedSyntaxes_) |
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53 { |
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54 requiredCount += 1; |
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55 } |
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56 |
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57 if (association_->GetRemainingPropositions() <= requiredCount) |
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58 { |
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59 return false; // Not enough room |
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60 } |
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61 |
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62 for (std::set<DicomTransferSyntax>::const_iterator |
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63 it = syntaxes.begin(); it != syntaxes.end(); ++it) |
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64 { |
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65 association_->ProposePresentationContext(sopClassUid, *it); |
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66 } |
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67 |
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68 if (proposeUncompressedSyntaxes_) |
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69 { |
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70 std::set<DicomTransferSyntax> uncompressed; |
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71 |
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72 if (syntaxes.find(DicomTransferSyntax_LittleEndianImplicit) == syntaxes.end()) |
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73 { |
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74 uncompressed.insert(DicomTransferSyntax_LittleEndianImplicit); |
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75 } |
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76 |
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77 if (syntaxes.find(DicomTransferSyntax_LittleEndianExplicit) == syntaxes.end()) |
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78 { |
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79 uncompressed.insert(DicomTransferSyntax_LittleEndianExplicit); |
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80 } |
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81 |
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82 if (proposeRetiredBigEndian_ && |
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83 syntaxes.find(DicomTransferSyntax_BigEndianExplicit) == syntaxes.end()) |
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84 { |
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85 uncompressed.insert(DicomTransferSyntax_BigEndianExplicit); |
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86 } |
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87 |
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88 if (!uncompressed.empty()) |
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89 { |
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90 association_->ProposePresentationContext(sopClassUid, uncompressed); |
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91 } |
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92 } |
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93 |
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94 return true; |
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95 } |
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96 |
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97 |
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98 bool DicomStoreUserConnection::LookupPresentationContext( |
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99 uint8_t& presentationContextId, |
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100 const std::string& sopClassUid, |
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101 DicomTransferSyntax transferSyntax) |
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102 { |
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103 typedef std::map<DicomTransferSyntax, uint8_t> PresentationContexts; |
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104 |
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105 PresentationContexts pc; |
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106 if (association_->IsOpen() && |
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107 association_->LookupAcceptedPresentationContext(pc, sopClassUid)) |
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108 { |
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109 PresentationContexts::const_iterator found = pc.find(transferSyntax); |
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110 if (found != pc.end()) |
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111 { |
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112 presentationContextId = found->second; |
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113 return true; |
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114 } |
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115 } |
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116 |
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117 return false; |
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118 } |
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119 |
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120 |
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121 DicomStoreUserConnection::DicomStoreUserConnection( |
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122 const DicomAssociationParameters& params) : |
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123 parameters_(params), |
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124 association_(new DicomAssociation), |
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125 proposeCommonClasses_(true), |
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126 proposeUncompressedSyntaxes_(true), |
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127 proposeRetiredBigEndian_(false) |
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128 { |
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129 } |
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130 |
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131 |
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132 void DicomStoreUserConnection::PrepareStorageClass(const std::string& sopClassUid, |
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133 DicomTransferSyntax syntax) |
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134 { |
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135 StorageClasses::iterator found = storageClasses_.find(sopClassUid); |
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136 |
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137 if (found == storageClasses_.end()) |
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138 { |
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139 std::set<DicomTransferSyntax> ts; |
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140 ts.insert(syntax); |
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141 storageClasses_[sopClassUid] = ts; |
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142 } |
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143 else |
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144 { |
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145 found->second.insert(syntax); |
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146 } |
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147 } |
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148 |
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149 |
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150 bool DicomStoreUserConnection::NegotiatePresentationContext( |
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151 uint8_t& presentationContextId, |
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152 const std::string& sopClassUid, |
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153 DicomTransferSyntax transferSyntax) |
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154 { |
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155 /** |
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156 * Step 1: Check whether this presentation context is already |
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157 * available in the previously negociated assocation. |
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158 **/ |
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159 |
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160 if (LookupPresentationContext(presentationContextId, sopClassUid, transferSyntax)) |
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161 { |
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162 return true; |
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163 } |
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164 |
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165 // The association must be re-negotiated |
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166 LOG(INFO) << "Re-negociating DICOM association with " |
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167 << parameters_.GetRemoteApplicationEntityTitle(); |
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168 association_->ClearPresentationContexts(); |
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169 PrepareStorageClass(sopClassUid, transferSyntax); |
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170 |
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171 |
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172 /** |
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173 * Step 2: Propose at least the mandatory SOP class. |
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174 **/ |
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175 |
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176 { |
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177 StorageClasses::const_iterator mandatory = storageClasses_.find(sopClassUid); |
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178 |
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179 if (mandatory == storageClasses_.end() || |
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180 mandatory->second.find(transferSyntax) == mandatory->second.end()) |
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181 { |
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182 throw OrthancException(ErrorCode_InternalError); |
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183 } |
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184 |
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185 if (!ProposeStorageClass(sopClassUid, mandatory->second)) |
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186 { |
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187 // Should never happen in real life: There are no more than |
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188 // 128 transfer syntaxes in DICOM! |
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189 throw OrthancException(ErrorCode_InternalError, |
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190 "Too many transfer syntaxes for SOP class UID: " + sopClassUid); |
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191 } |
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192 } |
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193 |
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194 |
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195 /** |
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196 * Step 3: Propose all the previously spotted SOP classes, as |
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197 * registered through the "PrepareStorageClass()" method. |
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198 **/ |
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199 |
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200 for (StorageClasses::const_iterator it = storageClasses_.begin(); |
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201 it != storageClasses_.end(); ++it) |
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202 { |
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203 if (it->first != sopClassUid) |
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204 { |
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205 ProposeStorageClass(it->first, it->second); |
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206 } |
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207 } |
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208 |
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209 |
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210 /** |
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211 * Step 4: As long as there is room left in the proposed |
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212 * presentation contexts, propose the uncompressed transfer syntaxes |
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213 * for the most common SOP classes, as can be found in the |
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214 * "dcmShortSCUStorageSOPClassUIDs" array from DCMTK. The |
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215 * preferred transfer syntax is "LittleEndianImplicit". |
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216 **/ |
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217 |
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218 if (proposeCommonClasses_) |
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219 { |
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220 std::set<DicomTransferSyntax> ts; |
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221 ts.insert(DicomTransferSyntax_LittleEndianImplicit); |
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222 |
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223 for (int i = 0; i < numberOfDcmShortSCUStorageSOPClassUIDs; i++) |
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224 { |
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225 std::string c(dcmShortSCUStorageSOPClassUIDs[i]); |
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226 |
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227 if (c != sopClassUid && |
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228 storageClasses_.find(c) == storageClasses_.end()) |
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229 { |
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230 ProposeStorageClass(c, ts); |
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231 } |
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232 } |
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233 } |
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234 |
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235 |
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236 /** |
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237 * Step 5: Open the association, and check whether the pair (SOP |
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238 * class UID, transfer syntax) was accepted by the remote host. |
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239 **/ |
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240 |
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241 association_->Open(parameters_); |
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242 return LookupPresentationContext(presentationContextId, sopClassUid, transferSyntax); |
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243 } |
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244 |
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245 |
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246 void DicomStoreUserConnection::Store(std::string& sopClassUid, |
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247 std::string& sopInstanceUid, |
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248 DcmDataset& dataset, |
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249 const std::string& moveOriginatorAET, |
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250 uint16_t moveOriginatorID) |
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251 { |
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252 OFString a, b; |
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253 if (!dataset.findAndGetOFString(DCM_SOPClassUID, a).good() || |
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254 !dataset.findAndGetOFString(DCM_SOPInstanceUID, b).good()) |
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255 { |
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256 throw OrthancException(ErrorCode_NoSopClassOrInstance, |
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257 "Unable to determine the SOP class/instance for C-STORE with AET " + |
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258 parameters_.GetRemoteApplicationEntityTitle()); |
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259 } |
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260 |
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261 sopClassUid.assign(a.c_str()); |
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262 sopInstanceUid.assign(b.c_str()); |
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263 |
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264 DicomTransferSyntax transferSyntax; |
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265 if (!FromDcmtkBridge::LookupOrthancTransferSyntax( |
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266 transferSyntax, dataset.getOriginalXfer())) |
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267 { |
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268 throw OrthancException(ErrorCode_InternalError, |
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269 "Unknown transfer syntax from DCMTK"); |
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270 } |
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271 |
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272 // Figure out which accepted presentation context should be used |
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273 uint8_t presID; |
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274 if (!NegotiatePresentationContext(presID, sopClassUid.c_str(), transferSyntax)) |
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275 { |
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276 throw OrthancException(ErrorCode_InternalError, |
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277 "No valid presentation context was negotiated upfront"); |
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278 } |
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279 |
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280 // Prepare the transmission of data |
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281 T_DIMSE_C_StoreRQ request; |
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282 memset(&request, 0, sizeof(request)); |
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283 request.MessageID = association_->GetDcmtkAssociation().nextMsgID++; |
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284 strncpy(request.AffectedSOPClassUID, sopClassUid.c_str(), DIC_UI_LEN); |
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285 request.Priority = DIMSE_PRIORITY_MEDIUM; |
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286 request.DataSetType = DIMSE_DATASET_PRESENT; |
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287 strncpy(request.AffectedSOPInstanceUID, sopInstanceUid.c_str(), DIC_UI_LEN); |
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288 |
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289 if (!moveOriginatorAET.empty()) |
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290 { |
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291 strncpy(request.MoveOriginatorApplicationEntityTitle, |
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292 moveOriginatorAET.c_str(), DIC_AE_LEN); |
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293 request.opts = O_STORE_MOVEORIGINATORAETITLE; |
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294 |
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295 request.MoveOriginatorID = moveOriginatorID; // The type DIC_US is an alias for uint16_t |
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296 request.opts |= O_STORE_MOVEORIGINATORID; |
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297 } |
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298 |
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299 // Finally conduct transmission of data |
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300 T_DIMSE_C_StoreRSP response; |
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301 DcmDataset* statusDetail = NULL; |
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302 DicomAssociation::CheckCondition( |
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303 DIMSE_storeUser(&association_->GetDcmtkAssociation(), presID, &request, |
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304 NULL, &dataset, /*progressCallback*/ NULL, NULL, |
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305 /*opt_blockMode*/ (GetParameters().HasTimeout() ? DIMSE_NONBLOCKING : DIMSE_BLOCKING), |
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306 /*opt_dimse_timeout*/ GetParameters().GetTimeout(), |
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307 &response, &statusDetail, NULL), |
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308 GetParameters(), "C-STORE"); |
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309 |
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310 if (statusDetail != NULL) |
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311 { |
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312 delete statusDetail; |
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313 } |
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314 |
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315 /** |
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316 * New in Orthanc 1.6.0: Deal with failures during C-STORE. |
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317 * http://dicom.nema.org/medical/dicom/current/output/chtml/part04/sect_B.2.3.html#table_B.2-1 |
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318 **/ |
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319 |
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320 if (response.DimseStatus != 0x0000 && // Success |
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321 response.DimseStatus != 0xB000 && // Warning - Coercion of Data Elements |
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322 response.DimseStatus != 0xB007 && // Warning - Data Set does not match SOP Class |
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323 response.DimseStatus != 0xB006) // Warning - Elements Discarded |
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324 { |
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325 char buf[16]; |
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326 sprintf(buf, "%04X", response.DimseStatus); |
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327 throw OrthancException(ErrorCode_NetworkProtocol, |
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328 "C-STORE SCU to AET \"" + |
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329 GetParameters().GetRemoteApplicationEntityTitle() + |
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330 "\" has failed with DIMSE status 0x" + buf); |
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331 } |
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332 } |
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333 |
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334 |
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335 void DicomStoreUserConnection::Store(std::string& sopClassUid, |
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336 std::string& sopInstanceUid, |
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337 ParsedDicomFile& parsed, |
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338 const std::string& moveOriginatorAET, |
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339 uint16_t moveOriginatorID) |
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340 { |
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341 Store(sopClassUid, sopInstanceUid, *parsed.GetDcmtkObject().getDataset(), |
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342 moveOriginatorAET, moveOriginatorID); |
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343 } |
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344 |
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345 |
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346 void DicomStoreUserConnection::Store(std::string& sopClassUid, |
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347 std::string& sopInstanceUid, |
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348 const void* buffer, |
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349 size_t size, |
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350 const std::string& moveOriginatorAET, |
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351 uint16_t moveOriginatorID) |
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352 { |
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353 std::unique_ptr<DcmFileFormat> dicom( |
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354 FromDcmtkBridge::LoadFromMemoryBuffer(buffer, size)); |
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355 |
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356 Store(sopClassUid, sopInstanceUid, *dicom->getDataset(), |
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357 moveOriginatorAET, moveOriginatorID); |
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358 } |
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359 } |