Mercurial > hg > orthanc
annotate OrthancServer/ServerIndex.cpp @ 1794:bdfae6e17d23 worklists
integration mainline->worklists
author | Sebastien Jodogne <s.jodogne@gmail.com> |
---|---|
date | Thu, 19 Nov 2015 16:02:35 +0100 |
parents | 613df4362575 |
children | 9ed9458aa44f |
rev | line source |
---|---|
0 | 1 /** |
62 | 2 * Orthanc - A Lightweight, RESTful DICOM Store |
1288
6e7e5ed91c2d
upgrade to year 2015
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1286
diff
changeset
|
3 * Copyright (C) 2012-2015 Sebastien Jodogne, Medical Physics |
6e7e5ed91c2d
upgrade to year 2015
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1286
diff
changeset
|
4 * Department, University Hospital of Liege, Belgium |
0 | 5 * |
6 * This program is free software: you can redistribute it and/or | |
7 * modify it under the terms of the GNU General Public License as | |
8 * published by the Free Software Foundation, either version 3 of the | |
9 * License, or (at your option) any later version. | |
136 | 10 * |
11 * In addition, as a special exception, the copyright holders of this | |
12 * program give permission to link the code of its release with the | |
13 * OpenSSL project's "OpenSSL" library (or with modified versions of it | |
14 * that use the same license as the "OpenSSL" library), and distribute | |
15 * the linked executables. You must obey the GNU General Public License | |
16 * in all respects for all of the code used other than "OpenSSL". If you | |
17 * modify file(s) with this exception, you may extend this exception to | |
18 * your version of the file(s), but you are not obligated to do so. If | |
19 * you do not wish to do so, delete this exception statement from your | |
20 * version. If you delete this exception statement from all source files | |
21 * in the program, then also delete it here. | |
0 | 22 * |
23 * This program is distributed in the hope that it will be useful, but | |
24 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
26 * General Public License for more details. | |
27 * | |
28 * You should have received a copy of the GNU General Public License | |
29 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
30 **/ | |
31 | |
32 | |
831
84513f2ee1f3
pch for unit tests and server
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
824
diff
changeset
|
33 #include "PrecompiledHeadersServer.h" |
0 | 34 #include "ServerIndex.h" |
35 | |
6 | 36 #ifndef NOMINMAX |
2 | 37 #define NOMINMAX |
6 | 38 #endif |
39 | |
1198 | 40 #include "ServerIndexChange.h" |
8 | 41 #include "EmbeddedResources.h" |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
42 #include "OrthancInitialization.h" |
1668
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
43 #include "ServerToolbox.h" |
0 | 44 #include "../Core/Toolbox.h" |
1486
f967bdf8534e
refactoring to Logging.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1453
diff
changeset
|
45 #include "../Core/Logging.h" |
0 | 46 #include "../Core/Uuid.h" |
47 #include "../Core/DicomFormat/DicomArray.h" | |
1747 | 48 #include "Search/LookupIdentifierQuery.h" |
1750
55d52567bebb
LookupResource implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1747
diff
changeset
|
49 #include "Search/LookupResource.h" |
1486
f967bdf8534e
refactoring to Logging.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1453
diff
changeset
|
50 |
0 | 51 #include "FromDcmtkBridge.h" |
226
8a26a8e85edf
refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
224
diff
changeset
|
52 #include "ServerContext.h" |
0 | 53 |
54 #include <boost/lexical_cast.hpp> | |
55 #include <stdio.h> | |
56 | |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
57 static const uint64_t MEGA_BYTES = 1024 * 1024; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
58 |
62 | 59 namespace Orthanc |
0 | 60 { |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
61 class ServerIndex::Listener : public IDatabaseListener |
0 | 62 { |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
63 private: |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
64 struct FileToRemove |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
65 { |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
66 private: |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
67 std::string uuid_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
68 FileContentType type_; |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
69 |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
70 public: |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
71 FileToRemove(const FileInfo& info) : uuid_(info.GetUuid()), |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
72 type_(info.GetContentType()) |
1191
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
73 { |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
74 } |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
75 |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
76 const std::string& GetUuid() const |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
77 { |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
78 return uuid_; |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
79 } |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
80 |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
81 FileContentType GetContentType() const |
264
5b8e8b74bc8b
remove files only after the sqlite transaction has succeeded
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
240
diff
changeset
|
82 { |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
83 return type_; |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
84 } |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
85 }; |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
86 |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
87 ServerContext& context_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
88 bool hasRemainingLevel_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
89 ResourceType remainingType_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
90 std::string remainingPublicId_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
91 std::list<FileToRemove> pendingFilesToRemove_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
92 std::list<ServerIndexChange> pendingChanges_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
93 uint64_t sizeOfFilesToRemove_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
94 bool insideTransaction_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
95 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
96 void Reset() |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
97 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
98 sizeOfFilesToRemove_ = 0; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
99 hasRemainingLevel_ = false; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
100 pendingFilesToRemove_.clear(); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
101 pendingChanges_.clear(); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
102 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
103 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
104 public: |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
105 Listener(ServerContext& context) : context_(context), |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
106 insideTransaction_(false) |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
107 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
108 Reset(); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
109 assert(ResourceType_Patient < ResourceType_Study && |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
110 ResourceType_Study < ResourceType_Series && |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
111 ResourceType_Series < ResourceType_Instance); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
112 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
113 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
114 void StartTransaction() |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
115 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
116 Reset(); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
117 insideTransaction_ = true; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
118 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
119 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
120 void EndTransaction() |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
121 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
122 insideTransaction_ = false; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
123 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
124 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
125 uint64_t GetSizeOfFilesToRemove() |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
126 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
127 return sizeOfFilesToRemove_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
128 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
129 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
130 void CommitFilesToRemove() |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
131 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
132 for (std::list<FileToRemove>::const_iterator |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
133 it = pendingFilesToRemove_.begin(); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
134 it != pendingFilesToRemove_.end(); ++it) |
1189
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
135 { |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
136 context_.RemoveFile(it->GetUuid(), it->GetContentType()); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
137 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
138 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
139 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
140 void CommitChanges() |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
141 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
142 for (std::list<ServerIndexChange>::const_iterator |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
143 it = pendingChanges_.begin(); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
144 it != pendingChanges_.end(); ++it) |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
145 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
146 context_.SignalChange(*it); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
147 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
148 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
149 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
150 virtual void SignalRemainingAncestor(ResourceType parentType, |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
151 const std::string& publicId) |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
152 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
153 VLOG(1) << "Remaining ancestor \"" << publicId << "\" (" << parentType << ")"; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
154 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
155 if (hasRemainingLevel_) |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
156 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
157 if (parentType < remainingType_) |
1189
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
158 { |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
159 remainingType_ = parentType; |
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
160 remainingPublicId_ = publicId; |
1191
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
161 } |
1158 | 162 } |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
163 else |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
164 { |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
165 hasRemainingLevel_ = true; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
166 remainingType_ = parentType; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
167 remainingPublicId_ = publicId; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
168 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
169 } |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
170 |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
171 virtual void SignalFileDeleted(const FileInfo& info) |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
172 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
173 assert(Toolbox::IsUuid(info.GetUuid())); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
174 pendingFilesToRemove_.push_back(FileToRemove(info)); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
175 sizeOfFilesToRemove_ += info.GetCompressedSize(); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
176 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
177 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
178 virtual void SignalChange(const ServerIndexChange& change) |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
179 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
180 VLOG(1) << "Change related to resource " << change.GetPublicId() << " of type " |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
181 << EnumerationToString(change.GetResourceType()) << ": " |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
182 << EnumerationToString(change.GetChangeType()); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
183 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
184 if (insideTransaction_) |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
185 { |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
186 pendingChanges_.push_back(change); |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
187 } |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
188 else |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
189 { |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
190 context_.SignalChange(change); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
191 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
192 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
193 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
194 bool HasRemainingLevel() const |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
195 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
196 return hasRemainingLevel_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
197 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
198 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
199 ResourceType GetRemainingType() const |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
200 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
201 assert(HasRemainingLevel()); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
202 return remainingType_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
203 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
204 |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
205 const std::string& GetRemainingPublicId() const |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
206 { |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
207 assert(HasRemainingLevel()); |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
208 return remainingPublicId_; |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
209 } |
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
210 }; |
0 | 211 |
212 | |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
213 class ServerIndex::Transaction |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
214 { |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
215 private: |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
216 ServerIndex& index_; |
1235 | 217 std::auto_ptr<SQLite::ITransaction> transaction_; |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
218 bool isCommitted_; |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
219 |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
220 public: |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
221 Transaction(ServerIndex& index) : |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
222 index_(index), |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
223 isCommitted_(false) |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
224 { |
1247 | 225 transaction_.reset(index_.db_.StartTransaction()); |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
226 transaction_->Begin(); |
1191
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
227 |
1270 | 228 assert(index_.currentStorageSize_ == index_.db_.GetTotalCompressedSize()); |
229 | |
1191
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
230 index_.listener_->StartTransaction(); |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
231 } |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
232 |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
233 ~Transaction() |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
234 { |
d49505e377e3
demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1189
diff
changeset
|
235 index_.listener_->EndTransaction(); |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
236 |
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
237 if (!isCommitted_) |
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
238 { |
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
239 transaction_->Rollback(); |
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
240 } |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
241 } |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
242 |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
243 void Commit(uint64_t sizeOfAddedFiles) |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
244 { |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
245 if (!isCommitted_) |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
246 { |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
247 transaction_->Commit(); |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
248 |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
249 // We can remove the files once the SQLite transaction has |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
250 // been successfully committed. Some files might have to be |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
251 // deleted because of recycling. |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
252 index_.listener_->CommitFilesToRemove(); |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
253 |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
254 index_.currentStorageSize_ += sizeOfAddedFiles; |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
255 |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
256 assert(index_.currentStorageSize_ >= index_.listener_->GetSizeOfFilesToRemove()); |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
257 index_.currentStorageSize_ -= index_.listener_->GetSizeOfFilesToRemove(); |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
258 |
1189
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
259 // Send all the pending changes to the Orthanc plugins |
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
260 index_.listener_->CommitChanges(); |
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
261 |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
262 isCommitted_ = true; |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
263 } |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
264 } |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
265 }; |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
266 |
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
267 |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
268 class ServerIndex::UnstableResourcePayload |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
269 { |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
270 private: |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
271 ResourceType type_; |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
272 std::string publicId_; |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
273 boost::posix_time::ptime time_; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
274 |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
275 public: |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
276 UnstableResourcePayload() : type_(ResourceType_Instance) |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
277 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
278 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
279 |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
280 UnstableResourcePayload(Orthanc::ResourceType type, |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
281 const std::string& publicId) : |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
282 type_(type), |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
283 publicId_(publicId) |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
284 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
285 time_ = boost::posix_time::second_clock::local_time(); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
286 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
287 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
288 unsigned int GetAge() const |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
289 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
290 return (boost::posix_time::second_clock::local_time() - time_).total_seconds(); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
291 } |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
292 |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
293 ResourceType GetResourceType() const |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
294 { |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
295 return type_; |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
296 } |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
297 |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
298 const std::string& GetPublicId() const |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
299 { |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
300 return publicId_; |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
301 } |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
302 }; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
303 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
304 |
212 | 305 bool ServerIndex::DeleteResource(Json::Value& target, |
0 | 306 const std::string& uuid, |
202 | 307 ResourceType expectedType) |
0 | 308 { |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
309 boost::mutex::scoped_lock lock(mutex_); |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
310 |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
311 Transaction t(*this); |
201
bee20e978835
refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
200
diff
changeset
|
312 |
202 | 313 int64_t id; |
314 ResourceType type; | |
1294 | 315 if (!db_.LookupResource(id, type, uuid) || |
202 | 316 expectedType != type) |
0 | 317 { |
318 return false; | |
319 } | |
202 | 320 |
1247 | 321 db_.DeleteResource(id); |
0 | 322 |
202 | 323 if (listener_->HasRemainingLevel()) |
0 | 324 { |
202 | 325 ResourceType type = listener_->GetRemainingType(); |
326 const std::string& uuid = listener_->GetRemainingPublicId(); | |
0 | 327 |
328 target["RemainingAncestor"] = Json::Value(Json::objectValue); | |
204 | 329 target["RemainingAncestor"]["Path"] = GetBasePath(type, uuid); |
434
ccf3a0a43dac
EnumerationDictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
330 target["RemainingAncestor"]["Type"] = EnumerationToString(type); |
0 | 331 target["RemainingAncestor"]["ID"] = uuid; |
332 } | |
333 else | |
334 { | |
335 target["RemainingAncestor"] = Json::nullValue; | |
336 } | |
337 | |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
338 t.Commit(0); |
264
5b8e8b74bc8b
remove files only after the sqlite transaction has succeeded
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
240
diff
changeset
|
339 |
0 | 340 return true; |
341 } | |
342 | |
343 | |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
344 void ServerIndex::FlushThread(ServerIndex* that) |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
345 { |
1102
ce6386b37afd
avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1006
diff
changeset
|
346 // By default, wait for 10 seconds before flushing |
ce6386b37afd
avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1006
diff
changeset
|
347 unsigned int sleep = 10; |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
348 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
349 try |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
350 { |
744 | 351 boost::mutex::scoped_lock lock(that->mutex_); |
1239 | 352 std::string sleepString; |
1102
ce6386b37afd
avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1006
diff
changeset
|
353 |
1247 | 354 if (that->db_.LookupGlobalProperty(sleepString, GlobalProperty_FlushSleep) && |
1239 | 355 Toolbox::IsInteger(sleepString)) |
1102
ce6386b37afd
avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1006
diff
changeset
|
356 { |
ce6386b37afd
avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1006
diff
changeset
|
357 sleep = boost::lexical_cast<unsigned int>(sleepString); |
ce6386b37afd
avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1006
diff
changeset
|
358 } |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
359 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
360 catch (boost::bad_lexical_cast&) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
361 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
362 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
363 |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
364 LOG(INFO) << "Starting the database flushing thread (sleep = " << sleep << ")"; |
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
365 |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
366 unsigned int count = 0; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
367 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
368 while (!that->done_) |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
369 { |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
370 boost::this_thread::sleep(boost::posix_time::seconds(1)); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
371 count++; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
372 if (count < sleep) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
373 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
374 continue; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
375 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
376 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
377 boost::mutex::scoped_lock lock(that->mutex_); |
1247 | 378 that->db_.FlushToDisk(); |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
379 count = 0; |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
380 } |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
381 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
382 LOG(INFO) << "Stopping the database flushing thread"; |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
383 } |
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
384 |
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
385 |
1247 | 386 static void ComputeExpectedNumberOfInstances(IDatabaseWrapper& db, |
433 | 387 int64_t series, |
388 const DicomMap& dicomSummary) | |
389 { | |
390 try | |
391 { | |
656 | 392 const DicomValue* value; |
393 const DicomValue* value2; | |
394 | |
433 | 395 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_IMAGES_IN_ACQUISITION)) != NULL && |
396 (value2 = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_TEMPORAL_POSITIONS)) != NULL) | |
397 { | |
398 // Patch for series with temporal positions thanks to Will Ryder | |
1737
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1725
diff
changeset
|
399 int64_t imagesInAcquisition = boost::lexical_cast<int64_t>(value->GetContent()); |
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1725
diff
changeset
|
400 int64_t countTemporalPositions = boost::lexical_cast<int64_t>(value2->GetContent()); |
433 | 401 std::string expected = boost::lexical_cast<std::string>(imagesInAcquisition * countTemporalPositions); |
402 db.SetMetadata(series, MetadataType_Series_ExpectedNumberOfInstances, expected); | |
403 } | |
404 | |
405 else if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_SLICES)) != NULL && | |
406 (value2 = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_TIME_SLICES)) != NULL) | |
407 { | |
408 // Support of Cardio-PET images | |
1737
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1725
diff
changeset
|
409 int64_t numberOfSlices = boost::lexical_cast<int64_t>(value->GetContent()); |
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1725
diff
changeset
|
410 int64_t numberOfTimeSlices = boost::lexical_cast<int64_t>(value2->GetContent()); |
433 | 411 std::string expected = boost::lexical_cast<std::string>(numberOfSlices * numberOfTimeSlices); |
412 db.SetMetadata(series, MetadataType_Series_ExpectedNumberOfInstances, expected); | |
413 } | |
414 | |
415 else if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES)) != NULL) | |
416 { | |
1737
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1725
diff
changeset
|
417 db.SetMetadata(series, MetadataType_Series_ExpectedNumberOfInstances, value->GetContent()); |
433 | 418 } |
419 } | |
1737
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1725
diff
changeset
|
420 catch (OrthancException&) |
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1725
diff
changeset
|
421 { |
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1725
diff
changeset
|
422 } |
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1725
diff
changeset
|
423 catch (boost::bad_lexical_cast&) |
433 | 424 { |
425 } | |
426 } | |
427 | |
428 | |
1237 | 429 |
430 | |
1238 | 431 bool ServerIndex::GetMetadataAsInteger(int64_t& result, |
1237 | 432 int64_t id, |
433 MetadataType type) | |
434 { | |
1238 | 435 std::string s; |
1247 | 436 if (!db_.LookupMetadata(s, id, type)) |
1237 | 437 { |
438 return false; | |
439 } | |
440 | |
441 try | |
442 { | |
1238 | 443 result = boost::lexical_cast<int64_t>(s); |
1237 | 444 return true; |
445 } | |
446 catch (boost::bad_lexical_cast&) | |
447 { | |
448 return false; | |
449 } | |
450 } | |
451 | |
452 | |
1297 | 453 void ServerIndex::LogChange(int64_t internalId, |
454 ChangeType changeType, | |
455 ResourceType resourceType, | |
456 const std::string& publicId) | |
457 { | |
458 ServerIndexChange change(changeType, resourceType, publicId); | |
1300
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
459 |
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
460 if (changeType <= ChangeType_INTERNAL_LastLogged) |
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
461 { |
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
462 db_.LogChange(internalId, change); |
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
463 } |
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
464 |
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
465 assert(listener_.get() != NULL); |
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
466 listener_->SignalChange(change); |
1297 | 467 } |
468 | |
1237 | 469 |
470 uint64_t ServerIndex::IncrementGlobalSequenceInternal(GlobalProperty property) | |
471 { | |
472 std::string oldValue; | |
473 | |
1247 | 474 if (db_.LookupGlobalProperty(oldValue, property)) |
1237 | 475 { |
476 uint64_t oldNumber; | |
477 | |
478 try | |
479 { | |
480 oldNumber = boost::lexical_cast<uint64_t>(oldValue); | |
1247 | 481 db_.SetGlobalProperty(property, boost::lexical_cast<std::string>(oldNumber + 1)); |
1237 | 482 return oldNumber + 1; |
483 } | |
484 catch (boost::bad_lexical_cast&) | |
485 { | |
486 throw OrthancException(ErrorCode_InternalError); | |
487 } | |
488 } | |
489 else | |
490 { | |
491 // Initialize the sequence at "1" | |
1247 | 492 db_.SetGlobalProperty(property, "1"); |
1237 | 493 return 1; |
494 } | |
495 } | |
496 | |
497 | |
498 | |
1299 | 499 int64_t ServerIndex::CreateResource(const std::string& publicId, |
500 ResourceType type) | |
501 { | |
502 int64_t id = db_.CreateResource(publicId, type); | |
503 | |
504 ChangeType changeType; | |
505 switch (type) | |
506 { | |
507 case ResourceType_Patient: | |
508 changeType = ChangeType_NewPatient; | |
509 break; | |
510 | |
511 case ResourceType_Study: | |
512 changeType = ChangeType_NewStudy; | |
513 break; | |
514 | |
515 case ResourceType_Series: | |
516 changeType = ChangeType_NewSeries; | |
517 break; | |
518 | |
519 case ResourceType_Instance: | |
520 changeType = ChangeType_NewInstance; | |
521 break; | |
522 | |
523 default: | |
524 throw OrthancException(ErrorCode_InternalError); | |
525 } | |
526 | |
527 ServerIndexChange change(changeType, type, publicId); | |
528 db_.LogChange(id, change); | |
1300
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
529 |
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
530 assert(listener_.get() != NULL); |
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
531 listener_->SignalChange(change); |
919dfb2fb3fe
DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1299
diff
changeset
|
532 |
1299 | 533 return id; |
534 } | |
535 | |
1286 | 536 |
226
8a26a8e85edf
refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
224
diff
changeset
|
537 ServerIndex::ServerIndex(ServerContext& context, |
1247 | 538 IDatabaseWrapper& db) : |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
539 done_(false), |
1247 | 540 db_(db), |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
541 maximumStorageSize_(0), |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
542 maximumPatients_(0) |
186
f68c039b0571
preparing refactoring of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
180
diff
changeset
|
543 { |
1432
0ac74fa21db8
rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
544 listener_.reset(new Listener(context)); |
1247 | 545 db_.SetListener(*listener_); |
180
626777d01dc4
use of hashes to index dicom objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
179
diff
changeset
|
546 |
1247 | 547 currentStorageSize_ = db_.GetTotalCompressedSize(); |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
548 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
549 // Initial recycling if the parameters have changed since the last |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
550 // execution of Orthanc |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
551 StandaloneRecycling(); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
552 |
1306
8cd5784a6d80
IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1305
diff
changeset
|
553 if (db.HasFlushToDisk()) |
8cd5784a6d80
IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1305
diff
changeset
|
554 { |
8cd5784a6d80
IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1305
diff
changeset
|
555 flushThread_ = boost::thread(FlushThread, this); |
8cd5784a6d80
IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1305
diff
changeset
|
556 } |
8cd5784a6d80
IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1305
diff
changeset
|
557 |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
558 unstableResourcesMonitorThread_ = boost::thread(UnstableResourcesMonitorThread, this); |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
559 } |
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
560 |
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
561 |
1453
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
562 |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
563 ServerIndex::~ServerIndex() |
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
564 { |
1453
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
565 if (!done_) |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
566 { |
1453
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
567 LOG(ERROR) << "INTERNAL ERROR: ServerIndex::Stop() should be invoked manually to avoid mess in the destruction order!"; |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
568 Stop(); |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
569 } |
0 | 570 } |
571 | |
572 | |
1453
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
573 |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
574 void ServerIndex::Stop() |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
575 { |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
576 if (!done_) |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
577 { |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
578 done_ = true; |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
579 |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
580 if (db_.HasFlushToDisk() && |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
581 flushThread_.joinable()) |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
582 { |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
583 flushThread_.join(); |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
584 } |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
585 |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
586 if (unstableResourcesMonitorThread_.joinable()) |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
587 { |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
588 unstableResourcesMonitorThread_.join(); |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
589 } |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
590 } |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
591 } |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
592 |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
593 |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1432
diff
changeset
|
594 |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
595 StoreStatus ServerIndex::Store(std::map<MetadataType, std::string>& instanceMetadata, |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
596 const DicomMap& dicomSummary, |
232
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
597 const Attachments& attachments, |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
598 const std::string& remoteAet, |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
599 const MetadataMap& metadata) |
0 | 600 { |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
601 boost::mutex::scoped_lock lock(mutex_); |
0 | 602 |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
603 instanceMetadata.clear(); |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
604 |
178 | 605 DicomInstanceHasher hasher(dicomSummary); |
0 | 606 |
607 try | |
608 { | |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
609 Transaction t(*this); |
0 | 610 |
202 | 611 // Do nothing if the instance already exists |
0 | 612 { |
432 | 613 ResourceType type; |
614 int64_t tmp; | |
1294 | 615 if (db_.LookupResource(tmp, type, hasher.HashInstance())) |
432 | 616 { |
617 assert(type == ResourceType_Instance); | |
1247 | 618 db_.GetAllMetadata(instanceMetadata, tmp); |
432 | 619 return StoreStatus_AlreadyStored; |
620 } | |
0 | 621 } |
622 | |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
623 // Ensure there is enough room in the storage for the new instance |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
624 uint64_t instanceSize = 0; |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
625 for (Attachments::const_iterator it = attachments.begin(); |
656 | 626 it != attachments.end(); ++it) |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
627 { |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
628 instanceSize += it->GetCompressedSize(); |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
629 } |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
630 |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
631 Recycle(instanceSize, hasher.HashPatient()); |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
632 |
202 | 633 // Create the instance |
1299 | 634 int64_t instance = CreateResource(hasher.HashInstance(), ResourceType_Instance); |
1716
2ca7888f8600
refactoring DicomIdentifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1711
diff
changeset
|
635 Toolbox::SetMainDicomTags(db_, instance, ResourceType_Instance, dicomSummary); |
202 | 636 |
432 | 637 // Detect up to which level the patient/study/series/instance |
638 // hierarchy must be created | |
639 int64_t patient = -1, study = -1, series = -1; | |
640 bool isNewPatient = false; | |
641 bool isNewStudy = false; | |
642 bool isNewSeries = false; | |
643 | |
0 | 644 { |
432 | 645 ResourceType dummy; |
646 | |
1294 | 647 if (db_.LookupResource(series, dummy, hasher.HashSeries())) |
432 | 648 { |
649 assert(dummy == ResourceType_Series); | |
650 // The patient, the study and the series already exist | |
651 | |
1294 | 652 bool ok = (db_.LookupResource(patient, dummy, hasher.HashPatient()) && |
653 db_.LookupResource(study, dummy, hasher.HashStudy())); | |
432 | 654 assert(ok); |
655 } | |
1294 | 656 else if (db_.LookupResource(study, dummy, hasher.HashStudy())) |
432 | 657 { |
658 assert(dummy == ResourceType_Study); | |
659 | |
660 // New series: The patient and the study already exist | |
661 isNewSeries = true; | |
662 | |
1294 | 663 bool ok = db_.LookupResource(patient, dummy, hasher.HashPatient()); |
432 | 664 assert(ok); |
665 } | |
1294 | 666 else if (db_.LookupResource(patient, dummy, hasher.HashPatient())) |
432 | 667 { |
668 assert(dummy == ResourceType_Patient); | |
669 | |
670 // New study and series: The patient already exist | |
671 isNewStudy = true; | |
672 isNewSeries = true; | |
673 } | |
674 else | |
675 { | |
676 // New patient, study and series: Nothing exists | |
677 isNewPatient = true; | |
678 isNewStudy = true; | |
679 isNewSeries = true; | |
680 } | |
681 } | |
682 | |
683 // Create the series if needed | |
684 if (isNewSeries) | |
685 { | |
1299 | 686 series = CreateResource(hasher.HashSeries(), ResourceType_Series); |
1716
2ca7888f8600
refactoring DicomIdentifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1711
diff
changeset
|
687 Toolbox::SetMainDicomTags(db_, series, ResourceType_Series, dicomSummary); |
432 | 688 } |
202 | 689 |
432 | 690 // Create the study if needed |
691 if (isNewStudy) | |
692 { | |
1299 | 693 study = CreateResource(hasher.HashStudy(), ResourceType_Study); |
1716
2ca7888f8600
refactoring DicomIdentifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1711
diff
changeset
|
694 Toolbox::SetMainDicomTags(db_, study, ResourceType_Study, dicomSummary); |
432 | 695 } |
696 | |
697 // Create the patient if needed | |
698 if (isNewPatient) | |
699 { | |
1299 | 700 patient = CreateResource(hasher.HashPatient(), ResourceType_Patient); |
1716
2ca7888f8600
refactoring DicomIdentifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1711
diff
changeset
|
701 Toolbox::SetMainDicomTags(db_, patient, ResourceType_Patient, dicomSummary); |
432 | 702 } |
202 | 703 |
432 | 704 // Create the parent-to-child links |
1247 | 705 db_.AttachChild(series, instance); |
432 | 706 |
707 if (isNewSeries) | |
708 { | |
1247 | 709 db_.AttachChild(study, series); |
0 | 710 } |
432 | 711 |
712 if (isNewStudy) | |
0 | 713 { |
1247 | 714 db_.AttachChild(patient, study); |
0 | 715 } |
716 | |
432 | 717 // Sanity checks |
718 assert(patient != -1); | |
719 assert(study != -1); | |
720 assert(series != -1); | |
721 assert(instance != -1); | |
722 | |
202 | 723 // Attach the files to the newly created instance |
232
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
724 for (Attachments::const_iterator it = attachments.begin(); |
656 | 725 it != attachments.end(); ++it) |
232
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
726 { |
1247 | 727 db_.AddAttachment(instance, *it); |
232
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
728 } |
202 | 729 |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
730 // Attach the user-specified metadata |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
731 for (MetadataMap::const_iterator |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
732 it = metadata.begin(); it != metadata.end(); ++it) |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
733 { |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
734 switch (it->first.first) |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
735 { |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
736 case ResourceType_Patient: |
1247 | 737 db_.SetMetadata(patient, it->first.second, it->second); |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
738 break; |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
739 |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
740 case ResourceType_Study: |
1247 | 741 db_.SetMetadata(study, it->first.second, it->second); |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
742 break; |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
743 |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
744 case ResourceType_Series: |
1247 | 745 db_.SetMetadata(series, it->first.second, it->second); |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
746 break; |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
747 |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
748 case ResourceType_Instance: |
1247 | 749 db_.SetMetadata(instance, it->first.second, it->second); |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
750 instanceMetadata[it->first.second] = it->second; |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
751 break; |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
752 |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
753 default: |
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
754 throw OrthancException(ErrorCode_ParameterOutOfRange); |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
755 } |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
756 } |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
757 |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
758 // Attach the auto-computed metadata for the patient/study/series levels |
432 | 759 std::string now = Toolbox::GetNowIsoString(); |
1247 | 760 db_.SetMetadata(series, MetadataType_LastUpdate, now); |
761 db_.SetMetadata(study, MetadataType_LastUpdate, now); | |
762 db_.SetMetadata(patient, MetadataType_LastUpdate, now); | |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
763 |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
764 // Attach the auto-computed metadata for the instance level, |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
765 // reflecting these additions into the input metadata map |
1247 | 766 db_.SetMetadata(instance, MetadataType_Instance_ReceptionDate, now); |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
767 instanceMetadata[MetadataType_Instance_ReceptionDate] = now; |
202 | 768 |
1247 | 769 db_.SetMetadata(instance, MetadataType_Instance_RemoteAet, remoteAet); |
1006
649d47854314
proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1004
diff
changeset
|
770 instanceMetadata[MetadataType_Instance_RemoteAet] = remoteAet; |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
771 |
202 | 772 const DicomValue* value; |
773 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_INSTANCE_NUMBER)) != NULL || | |
774 (value = dicomSummary.TestAndGetValue(DICOM_TAG_IMAGE_INDEX)) != NULL) | |
0 | 775 { |
1737
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1725
diff
changeset
|
776 if (!value->IsNull() && |
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1725
diff
changeset
|
777 !value->IsBinary()) |
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1725
diff
changeset
|
778 { |
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1725
diff
changeset
|
779 db_.SetMetadata(instance, MetadataType_Instance_IndexInSeries, value->GetContent()); |
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1725
diff
changeset
|
780 instanceMetadata[MetadataType_Instance_IndexInSeries] = value->GetContent(); |
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1725
diff
changeset
|
781 } |
0 | 782 } |
783 | |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
784 // Check whether the series of this new instance is now completed |
202 | 785 if (isNewSeries) |
786 { | |
1247 | 787 ComputeExpectedNumberOfInstances(db_, series, dicomSummary); |
202 | 788 } |
789 | |
205
6ab754744446
logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
204
diff
changeset
|
790 SeriesStatus seriesStatus = GetSeriesStatus(series); |
6ab754744446
logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
204
diff
changeset
|
791 if (seriesStatus == SeriesStatus_Complete) |
6ab754744446
logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
204
diff
changeset
|
792 { |
1237 | 793 LogChange(series, ChangeType_CompletedSeries, ResourceType_Series, hasher.HashSeries()); |
205
6ab754744446
logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
204
diff
changeset
|
794 } |
6ab754744446
logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
204
diff
changeset
|
795 |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
796 // Mark the parent resources of this instance as unstable |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
797 MarkAsUnstable(series, ResourceType_Series, hasher.HashSeries()); |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
798 MarkAsUnstable(study, ResourceType_Study, hasher.HashStudy()); |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
799 MarkAsUnstable(patient, ResourceType_Patient, hasher.HashPatient()); |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
800 |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
801 t.Commit(instanceSize); |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
802 |
0 | 803 return StoreStatus_Success; |
804 } | |
62 | 805 catch (OrthancException& e) |
0 | 806 { |
1247 | 807 LOG(ERROR) << "EXCEPTION [" << e.What() << "]"; |
0 | 808 } |
809 | |
810 return StoreStatus_Failure; | |
811 } | |
812 | |
813 | |
238 | 814 void ServerIndex::ComputeStatistics(Json::Value& target) |
0 | 815 { |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
816 boost::mutex::scoped_lock lock(mutex_); |
238 | 817 target = Json::objectValue; |
0 | 818 |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
819 uint64_t cs = currentStorageSize_; |
1247 | 820 assert(cs == db_.GetTotalCompressedSize()); |
821 uint64_t us = db_.GetTotalUncompressedSize(); | |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
822 target["TotalDiskSize"] = boost::lexical_cast<std::string>(cs); |
238 | 823 target["TotalUncompressedSize"] = boost::lexical_cast<std::string>(us); |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
824 target["TotalDiskSizeMB"] = static_cast<unsigned int>(cs / MEGA_BYTES); |
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
825 target["TotalUncompressedSizeMB"] = static_cast<unsigned int>(us / MEGA_BYTES); |
238 | 826 |
1247 | 827 target["CountPatients"] = static_cast<unsigned int>(db_.GetResourceCount(ResourceType_Patient)); |
828 target["CountStudies"] = static_cast<unsigned int>(db_.GetResourceCount(ResourceType_Study)); | |
829 target["CountSeries"] = static_cast<unsigned int>(db_.GetResourceCount(ResourceType_Series)); | |
830 target["CountInstances"] = static_cast<unsigned int>(db_.GetResourceCount(ResourceType_Instance)); | |
238 | 831 } |
832 | |
187
8e673a65564d
refactoring of storing new instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
186
diff
changeset
|
833 |
8e673a65564d
refactoring of storing new instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
186
diff
changeset
|
834 |
585 | 835 SeriesStatus ServerIndex::GetSeriesStatus(int64_t id) |
199 | 836 { |
837 // Get the expected number of instances in this series (from the metadata) | |
1238 | 838 int64_t expected; |
839 if (!GetMetadataAsInteger(expected, id, MetadataType_Series_ExpectedNumberOfInstances)) | |
199 | 840 { |
841 return SeriesStatus_Unknown; | |
842 } | |
843 | |
844 // Loop over the instances of this series | |
845 std::list<int64_t> children; | |
1247 | 846 db_.GetChildrenInternalId(children, id); |
199 | 847 |
1238 | 848 std::set<int64_t> instances; |
199 | 849 for (std::list<int64_t>::const_iterator |
656 | 850 it = children.begin(); it != children.end(); ++it) |
199 | 851 { |
852 // Get the index of this instance in the series | |
1238 | 853 int64_t index; |
854 if (!GetMetadataAsInteger(index, *it, MetadataType_Instance_IndexInSeries)) | |
199 | 855 { |
856 return SeriesStatus_Unknown; | |
857 } | |
858 | |
656 | 859 if (!(index > 0 && index <= expected)) |
199 | 860 { |
861 // Out-of-range instance index | |
862 return SeriesStatus_Inconsistent; | |
863 } | |
864 | |
865 if (instances.find(index) != instances.end()) | |
866 { | |
867 // Twice the same instance index | |
868 return SeriesStatus_Inconsistent; | |
869 } | |
870 | |
871 instances.insert(index); | |
872 } | |
873 | |
1238 | 874 if (static_cast<int64_t>(instances.size()) == expected) |
199 | 875 { |
876 return SeriesStatus_Complete; | |
877 } | |
878 else | |
879 { | |
880 return SeriesStatus_Missing; | |
881 } | |
882 } | |
883 | |
884 | |
202 | 885 void ServerIndex::MainDicomTagsToJson(Json::Value& target, |
1668
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
886 int64_t resourceId, |
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
887 ResourceType resourceType) |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
888 { |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
889 DicomMap tags; |
1247 | 890 db_.GetMainDicomTags(tags, resourceId); |
1676
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
891 |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
892 if (resourceType == ResourceType_Study) |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
893 { |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
894 DicomMap t1, t2; |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
895 tags.ExtractStudyInformation(t1); |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
896 tags.ExtractPatientInformation(t2); |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
897 |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
898 target["MainDicomTags"] = Json::objectValue; |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
899 FromDcmtkBridge::ToJson(target["MainDicomTags"], t1, true); |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
900 |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
901 target["PatientMainDicomTags"] = Json::objectValue; |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
902 FromDcmtkBridge::ToJson(target["PatientMainDicomTags"], t2, true); |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
903 } |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
904 else |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
905 { |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
906 target["MainDicomTags"] = Json::objectValue; |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
907 FromDcmtkBridge::ToJson(target["MainDicomTags"], tags, true); |
f079f3efe33b
patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1668
diff
changeset
|
908 } |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
909 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
910 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
911 bool ServerIndex::LookupResource(Json::Value& result, |
199 | 912 const std::string& publicId, |
913 ResourceType expectedType) | |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
914 { |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
915 result = Json::objectValue; |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
916 |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
917 boost::mutex::scoped_lock lock(mutex_); |
199 | 918 |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
919 // Lookup for the requested resource |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
920 int64_t id; |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
921 ResourceType type; |
1294 | 922 if (!db_.LookupResource(id, type, publicId) || |
199 | 923 type != expectedType) |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
924 { |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
925 return false; |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
926 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
927 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
928 // Find the parent resource (if it exists) |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
929 if (type != ResourceType_Patient) |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
930 { |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
931 int64_t parentId; |
1247 | 932 if (!db_.LookupParent(parentId, id)) |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
933 { |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
934 throw OrthancException(ErrorCode_InternalError); |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
935 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
936 |
1247 | 937 std::string parent = db_.GetPublicId(parentId); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
938 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
939 switch (type) |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
940 { |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
941 case ResourceType_Study: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
942 result["ParentPatient"] = parent; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
943 break; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
944 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
945 case ResourceType_Series: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
946 result["ParentStudy"] = parent; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
947 break; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
948 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
949 case ResourceType_Instance: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
950 result["ParentSeries"] = parent; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
951 break; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
952 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
953 default: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
954 throw OrthancException(ErrorCode_InternalError); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
955 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
956 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
957 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
958 // List the children resources |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
959 std::list<std::string> children; |
1247 | 960 db_.GetChildrenPublicId(children, id); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
961 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
962 if (type != ResourceType_Instance) |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
963 { |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
964 Json::Value c = Json::arrayValue; |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
965 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
966 for (std::list<std::string>::const_iterator |
656 | 967 it = children.begin(); it != children.end(); ++it) |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
968 { |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
969 c.append(*it); |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
970 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
971 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
972 switch (type) |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
973 { |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
974 case ResourceType_Patient: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
975 result["Studies"] = c; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
976 break; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
977 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
978 case ResourceType_Study: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
979 result["Series"] = c; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
980 break; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
981 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
982 case ResourceType_Series: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
983 result["Instances"] = c; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
984 break; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
985 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
986 default: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
987 throw OrthancException(ErrorCode_InternalError); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
988 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
989 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
990 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
991 // Set the resource type |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
992 switch (type) |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
993 { |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
994 case ResourceType_Patient: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
995 result["Type"] = "Patient"; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
996 break; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
997 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
998 case ResourceType_Study: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
999 result["Type"] = "Study"; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1000 break; |
199 | 1001 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1002 case ResourceType_Series: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1003 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1004 result["Type"] = "Series"; |
434
ccf3a0a43dac
EnumerationDictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
1005 result["Status"] = EnumerationToString(GetSeriesStatus(id)); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1006 |
1238 | 1007 int64_t i; |
1237 | 1008 if (GetMetadataAsInteger(i, id, MetadataType_Series_ExpectedNumberOfInstances)) |
1238 | 1009 result["ExpectedNumberOfInstances"] = static_cast<int>(i); |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1010 else |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1011 result["ExpectedNumberOfInstances"] = Json::nullValue; |
200
9c58b2b03cf0
refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
199
diff
changeset
|
1012 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1013 break; |
200
9c58b2b03cf0
refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
199
diff
changeset
|
1014 } |
9c58b2b03cf0
refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
199
diff
changeset
|
1015 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1016 case ResourceType_Instance: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1017 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1018 result["Type"] = "Instance"; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1019 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1020 FileInfo attachment; |
1247 | 1021 if (!db_.LookupAttachment(attachment, id, FileContentType_Dicom)) |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1022 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1023 throw OrthancException(ErrorCode_InternalError); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1024 } |
200
9c58b2b03cf0
refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
199
diff
changeset
|
1025 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1026 result["FileSize"] = static_cast<unsigned int>(attachment.GetUncompressedSize()); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1027 result["FileUuid"] = attachment.GetUuid(); |
200
9c58b2b03cf0
refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
199
diff
changeset
|
1028 |
1238 | 1029 int64_t i; |
1237 | 1030 if (GetMetadataAsInteger(i, id, MetadataType_Instance_IndexInSeries)) |
1238 | 1031 result["IndexInSeries"] = static_cast<int>(i); |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1032 else |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1033 result["IndexInSeries"] = Json::nullValue; |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1034 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1035 break; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1036 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1037 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1038 default: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1039 throw OrthancException(ErrorCode_InternalError); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1040 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1041 |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1042 // Record the remaining information |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1043 result["ID"] = publicId; |
1668
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1044 MainDicomTagsToJson(result, id, type); |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1045 |
315 | 1046 std::string tmp; |
1047 | |
1247 | 1048 if (db_.LookupMetadata(tmp, id, MetadataType_AnonymizedFrom)) |
1236 | 1049 { |
315 | 1050 result["AnonymizedFrom"] = tmp; |
1236 | 1051 } |
315 | 1052 |
1247 | 1053 if (db_.LookupMetadata(tmp, id, MetadataType_ModifiedFrom)) |
1236 | 1054 { |
315 | 1055 result["ModifiedFrom"] = tmp; |
1236 | 1056 } |
315 | 1057 |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1058 if (type == ResourceType_Patient || |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1059 type == ResourceType_Study || |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1060 type == ResourceType_Series) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1061 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1062 result["IsStable"] = !unstableResources_.Contains(id); |
1148
ac36589f699e
LastUpdate metadata is now always returned for patients, studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
1063 |
1247 | 1064 if (db_.LookupMetadata(tmp, id, MetadataType_LastUpdate)) |
1236 | 1065 { |
1148
ac36589f699e
LastUpdate metadata is now always returned for patients, studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
1066 result["LastUpdate"] = tmp; |
1236 | 1067 } |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1068 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1069 |
198
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1070 return true; |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1071 } |
663cc6c46d0a
before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
197
diff
changeset
|
1072 |
0 | 1073 |
232
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
1074 bool ServerIndex::LookupAttachment(FileInfo& attachment, |
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
1075 const std::string& instanceUuid, |
233 | 1076 FileContentType contentType) |
0 | 1077 { |
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
205
diff
changeset
|
1078 boost::mutex::scoped_lock lock(mutex_); |
0 | 1079 |
193
a1b9d1e1497b
failed attempt to compile with linux standard base
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1080 int64_t id; |
a1b9d1e1497b
failed attempt to compile with linux standard base
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1081 ResourceType type; |
1294 | 1082 if (!db_.LookupResource(id, type, instanceUuid)) |
192
c56dc32266e0
refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
191
diff
changeset
|
1083 { |
1113
ba5c0908600c
Refactoring of HttpOutput ("Content-Length" header is now always sent)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1102
diff
changeset
|
1084 throw OrthancException(ErrorCode_UnknownResource); |
192
c56dc32266e0
refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
191
diff
changeset
|
1085 } |
193
a1b9d1e1497b
failed attempt to compile with linux standard base
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1086 |
1247 | 1087 if (db_.LookupAttachment(attachment, id, contentType)) |
232
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
1088 { |
233 | 1089 assert(attachment.GetContentType() == contentType); |
232
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
1090 return true; |
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
1091 } |
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
1092 else |
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
1093 { |
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
1094 return false; |
5368bbe813cf
refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
1095 } |
192
c56dc32266e0
refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
191
diff
changeset
|
1096 } |
c56dc32266e0
refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
191
diff
changeset
|
1097 |
c56dc32266e0
refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
191
diff
changeset
|
1098 |
c56dc32266e0
refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
191
diff
changeset
|
1099 |
1354 | 1100 void ServerIndex::GetAllUuids(std::list<std::string>& target, |
190 | 1101 ResourceType resourceType) |
0 | 1102 { |
1357 | 1103 boost::mutex::scoped_lock lock(mutex_); |
1104 db_.GetAllPublicIds(target, resourceType); | |
0 | 1105 } |
1106 | |
1107 | |
1509
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1108 void ServerIndex::GetAllUuids(std::list<std::string>& target, |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1109 ResourceType resourceType, |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1110 size_t since, |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1111 size_t limit) |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1112 { |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1113 if (limit == 0) |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1114 { |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1115 target.clear(); |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1116 return; |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1117 } |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1118 |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1119 boost::mutex::scoped_lock lock(mutex_); |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1120 db_.GetAllPublicIds(target, resourceType, since, limit); |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1121 } |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1122 |
0586ed8897f1
limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
1123 |
1244 | 1124 template <typename T> |
1125 static void FormatLog(Json::Value& target, | |
1126 const std::list<T>& log, | |
1127 const std::string& name, | |
1128 bool done, | |
1129 int64_t since) | |
1240 | 1130 { |
1131 Json::Value items = Json::arrayValue; | |
1244 | 1132 for (typename std::list<T>::const_iterator |
1304 | 1133 it = log.begin(); it != log.end(); ++it) |
1240 | 1134 { |
1135 Json::Value item; | |
1136 it->Format(item); | |
1137 items.append(item); | |
1138 } | |
1139 | |
1140 target = Json::objectValue; | |
1244 | 1141 target[name] = items; |
1240 | 1142 target["Done"] = done; |
1143 | |
1305 | 1144 int64_t last = (log.empty() ? since : log.back().GetSeq()); |
1240 | 1145 target["Last"] = static_cast<int>(last); |
1146 } | |
1147 | |
1148 | |
1247 | 1149 void ServerIndex::GetChanges(Json::Value& target, |
204 | 1150 int64_t since, |
0 | 1151 unsigned int maxResults) |
1152 { | |
1240 | 1153 std::list<ServerIndexChange> changes; |
1154 bool done; | |
1155 | |
1156 { | |
1157 boost::mutex::scoped_lock lock(mutex_); | |
1247 | 1158 db_.GetChanges(changes, done, since, maxResults); |
1240 | 1159 } |
1160 | |
1244 | 1161 FormatLog(target, changes, "Changes", done, since); |
237
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
1162 } |
0 | 1163 |
1240 | 1164 |
1247 | 1165 void ServerIndex::GetLastChange(Json::Value& target) |
237
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
1166 { |
1240 | 1167 std::list<ServerIndexChange> changes; |
1168 | |
1169 { | |
1170 boost::mutex::scoped_lock lock(mutex_); | |
1247 | 1171 db_.GetLastChange(changes); |
1240 | 1172 } |
1173 | |
1244 | 1174 FormatLog(target, changes, "Changes", true, 0); |
0 | 1175 } |
231 | 1176 |
1240 | 1177 |
231 | 1178 void ServerIndex::LogExportedResource(const std::string& publicId, |
1179 const std::string& remoteModality) | |
1180 { | |
1181 boost::mutex::scoped_lock lock(mutex_); | |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1182 Transaction transaction(*this); |
231 | 1183 |
1184 int64_t id; | |
1185 ResourceType type; | |
1294 | 1186 if (!db_.LookupResource(id, type, publicId)) |
231 | 1187 { |
1188 throw OrthancException(ErrorCode_InternalError); | |
1189 } | |
1190 | |
1191 std::string patientId; | |
1192 std::string studyInstanceUid; | |
1193 std::string seriesInstanceUid; | |
1194 std::string sopInstanceUid; | |
1195 | |
1196 int64_t currentId = id; | |
1197 ResourceType currentType = type; | |
1198 | |
1199 // Iteratively go up inside the patient/study/series/instance hierarchy | |
1200 bool done = false; | |
1201 while (!done) | |
1202 { | |
1203 DicomMap map; | |
1247 | 1204 db_.GetMainDicomTags(map, currentId); |
231 | 1205 |
1206 switch (currentType) | |
1207 { | |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1208 case ResourceType_Patient: |
1737
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1725
diff
changeset
|
1209 patientId = map.GetValue(DICOM_TAG_PATIENT_ID).GetContent(); |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1210 done = true; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1211 break; |
231 | 1212 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1213 case ResourceType_Study: |
1737
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1725
diff
changeset
|
1214 studyInstanceUid = map.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).GetContent(); |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1215 currentType = ResourceType_Patient; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1216 break; |
231 | 1217 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1218 case ResourceType_Series: |
1737
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1725
diff
changeset
|
1219 seriesInstanceUid = map.GetValue(DICOM_TAG_SERIES_INSTANCE_UID).GetContent(); |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1220 currentType = ResourceType_Study; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1221 break; |
231 | 1222 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1223 case ResourceType_Instance: |
1737
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1725
diff
changeset
|
1224 sopInstanceUid = map.GetValue(DICOM_TAG_SOP_INSTANCE_UID).GetContent(); |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1225 currentType = ResourceType_Series; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1226 break; |
231 | 1227 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1228 default: |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1229 throw OrthancException(ErrorCode_InternalError); |
231 | 1230 } |
1231 | |
1232 // If we have not reached the Patient level, find the parent of | |
1233 // the current resource | |
1234 if (!done) | |
1235 { | |
1247 | 1236 bool ok = db_.LookupParent(currentId, currentId); |
375
d1ea72f1c967
major fix of storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
315
diff
changeset
|
1237 assert(ok); |
231 | 1238 } |
1239 } | |
1240 | |
1246 | 1241 ExportedResource resource(-1, |
1242 type, | |
1243 publicId, | |
1244 remoteModality, | |
1245 Toolbox::GetNowIsoString(), | |
1246 patientId, | |
1247 studyInstanceUid, | |
1248 seriesInstanceUid, | |
1249 sopInstanceUid); | |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1250 |
1247 | 1251 db_.LogExportedResource(resource); |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1252 transaction.Commit(0); |
231 | 1253 } |
1254 | |
1255 | |
1247 | 1256 void ServerIndex::GetExportedResources(Json::Value& target, |
231 | 1257 int64_t since, |
1258 unsigned int maxResults) | |
1259 { | |
1244 | 1260 std::list<ExportedResource> exported; |
1261 bool done; | |
1262 | |
1263 { | |
1264 boost::mutex::scoped_lock lock(mutex_); | |
1247 | 1265 db_.GetExportedResources(exported, done, since, maxResults); |
1244 | 1266 } |
1267 | |
1268 FormatLog(target, exported, "Exports", done, since); | |
231 | 1269 } |
237
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
1270 |
1244 | 1271 |
1247 | 1272 void ServerIndex::GetLastExportedResource(Json::Value& target) |
237
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
1273 { |
1244 | 1274 std::list<ExportedResource> exported; |
1275 | |
1276 { | |
1277 boost::mutex::scoped_lock lock(mutex_); | |
1247 | 1278 db_.GetLastExportedResource(exported); |
1244 | 1279 } |
1280 | |
1281 FormatLog(target, exported, "Exports", true, 0); | |
237
16a4ac70bd8a
last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
1282 } |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1283 |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1284 |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1285 bool ServerIndex::IsRecyclingNeeded(uint64_t instanceSize) |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1286 { |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1287 if (maximumStorageSize_ != 0) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1288 { |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
1289 uint64_t currentSize = currentStorageSize_ - listener_->GetSizeOfFilesToRemove(); |
1247 | 1290 assert(db_.GetTotalCompressedSize() == currentSize); |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
1291 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1292 if (currentSize + instanceSize > maximumStorageSize_) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1293 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1294 return true; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1295 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1296 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1297 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1298 if (maximumPatients_ != 0) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1299 { |
1247 | 1300 uint64_t patientCount = db_.GetResourceCount(ResourceType_Patient); |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1301 if (patientCount > maximumPatients_) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1302 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1303 return true; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1304 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1305 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1306 |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1307 return false; |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1308 } |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1309 |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1310 |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1311 void ServerIndex::Recycle(uint64_t instanceSize, |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1312 const std::string& newPatientId) |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1313 { |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1314 if (!IsRecyclingNeeded(instanceSize)) |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1315 { |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1316 return; |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1317 } |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1318 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1319 // Check whether other DICOM instances from this patient are |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1320 // already stored |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1321 int64_t patientToAvoid; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1322 ResourceType type; |
1294 | 1323 bool hasPatientToAvoid = db_.LookupResource(patientToAvoid, type, newPatientId); |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1324 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1325 if (hasPatientToAvoid && type != ResourceType_Patient) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1326 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1327 throw OrthancException(ErrorCode_InternalError); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1328 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1329 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1330 // Iteratively select patient to remove until there is enough |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1331 // space in the DICOM store |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1332 int64_t patientToRecycle; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1333 while (true) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1334 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1335 // If other instances of this patient are already in the store, |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1336 // we must avoid to recycle them |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1337 bool ok = hasPatientToAvoid ? |
1247 | 1338 db_.SelectPatientToRecycle(patientToRecycle, patientToAvoid) : |
1339 db_.SelectPatientToRecycle(patientToRecycle); | |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1340 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1341 if (!ok) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1342 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1343 throw OrthancException(ErrorCode_FullStorage); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1344 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1345 |
1331
77e129ba64e4
Prevent freeze on C-FIND if no DICOM tag is to be returned
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1310
diff
changeset
|
1346 VLOG(1) << "Recycling one patient"; |
1247 | 1347 db_.DeleteResource(patientToRecycle); |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1348 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1349 if (!IsRecyclingNeeded(instanceSize)) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1350 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1351 // OK, we're done |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1352 break; |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1353 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1354 } |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
1355 } |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1356 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1357 void ServerIndex::SetMaximumPatientCount(unsigned int count) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1358 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1359 boost::mutex::scoped_lock lock(mutex_); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1360 maximumPatients_ = count; |
270
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1361 |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1362 if (count == 0) |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1363 { |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1364 LOG(WARNING) << "No limit on the number of stored patients"; |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1365 } |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1366 else |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1367 { |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1368 LOG(WARNING) << "At most " << count << " patients will be stored"; |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1369 } |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1370 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1371 StandaloneRecycling(); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1372 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1373 |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1374 void ServerIndex::SetMaximumStorageSize(uint64_t size) |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1375 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1376 boost::mutex::scoped_lock lock(mutex_); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1377 maximumStorageSize_ = size; |
270
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1378 |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1379 if (size == 0) |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1380 { |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1381 LOG(WARNING) << "No limit on the size of the storage area"; |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1382 } |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1383 else |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1384 { |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1385 LOG(WARNING) << "At most " << (size / MEGA_BYTES) << "MB will be used for the storage area"; |
270
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1386 } |
e6a4c4329481
parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
1387 |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1388 StandaloneRecycling(); |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1389 } |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1390 |
272
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1391 void ServerIndex::StandaloneRecycling() |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1392 { |
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1393 // WARNING: No mutex here, do not include this as a public method |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
1394 Transaction t(*this); |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1395 Recycle(0, ""); |
278
771f12042be9
more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
273
diff
changeset
|
1396 t.Commit(0); |
269
f6fdf5abe751
recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
268
diff
changeset
|
1397 } |
272
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1398 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1399 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1400 bool ServerIndex::IsProtectedPatient(const std::string& publicId) |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1401 { |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1402 boost::mutex::scoped_lock lock(mutex_); |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1403 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1404 // Lookup for the requested resource |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1405 int64_t id; |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1406 ResourceType type; |
1294 | 1407 if (!db_.LookupResource(id, type, publicId) || |
272
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1408 type != ResourceType_Patient) |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1409 { |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1410 throw OrthancException(ErrorCode_ParameterOutOfRange); |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1411 } |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1412 |
1247 | 1413 return db_.IsProtectedPatient(id); |
272
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1414 } |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1415 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1416 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1417 void ServerIndex::SetProtectedPatient(const std::string& publicId, |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1418 bool isProtected) |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1419 { |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1420 boost::mutex::scoped_lock lock(mutex_); |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1421 Transaction transaction(*this); |
272
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1422 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1423 // Lookup for the requested resource |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1424 int64_t id; |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1425 ResourceType type; |
1294 | 1426 if (!db_.LookupResource(id, type, publicId) || |
272
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1427 type != ResourceType_Patient) |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1428 { |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1429 throw OrthancException(ErrorCode_ParameterOutOfRange); |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1430 } |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1431 |
1247 | 1432 db_.SetProtectedPatient(id, isProtected); |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1433 transaction.Commit(0); |
272
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1434 |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1435 if (isProtected) |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1436 LOG(INFO) << "Patient " << publicId << " has been protected"; |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1437 else |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1438 LOG(INFO) << "Patient " << publicId << " has been unprotected"; |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1439 } |
337c506461d2
protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
270
diff
changeset
|
1440 |
304 | 1441 |
714
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1442 void ServerIndex::GetChildren(std::list<std::string>& result, |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1443 const std::string& publicId) |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1444 { |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1445 result.clear(); |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1446 |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1447 boost::mutex::scoped_lock lock(mutex_); |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1448 |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1449 ResourceType type; |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1450 int64_t resource; |
1294 | 1451 if (!db_.LookupResource(resource, type, publicId)) |
714
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1452 { |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1453 throw OrthancException(ErrorCode_UnknownResource); |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1454 } |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1455 |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1456 if (type == ResourceType_Instance) |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1457 { |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1458 // An instance cannot have a child |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1459 throw OrthancException(ErrorCode_BadParameterType); |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1460 } |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1461 |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1462 std::list<int64_t> tmp; |
1247 | 1463 db_.GetChildrenInternalId(tmp, resource); |
714
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1464 |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1465 for (std::list<int64_t>::const_iterator |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1466 it = tmp.begin(); it != tmp.end(); ++it) |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1467 { |
1247 | 1468 result.push_back(db_.GetPublicId(*it)); |
714
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1469 } |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1470 } |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1471 |
6a1dbba0cca7
new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
704
diff
changeset
|
1472 |
304 | 1473 void ServerIndex::GetChildInstances(std::list<std::string>& result, |
1474 const std::string& publicId) | |
1475 { | |
1476 result.clear(); | |
1477 | |
1478 boost::mutex::scoped_lock lock(mutex_); | |
1479 | |
1480 ResourceType type; | |
1481 int64_t top; | |
1294 | 1482 if (!db_.LookupResource(top, type, publicId)) |
304 | 1483 { |
1484 throw OrthancException(ErrorCode_UnknownResource); | |
1485 } | |
1486 | |
1487 if (type == ResourceType_Instance) | |
1488 { | |
1489 // The resource is already an instance: Do not go down the hierarchy | |
1490 result.push_back(publicId); | |
1491 return; | |
1492 } | |
1493 | |
1494 std::stack<int64_t> toExplore; | |
1495 toExplore.push(top); | |
1496 | |
1497 std::list<int64_t> tmp; | |
1498 | |
1499 while (!toExplore.empty()) | |
1500 { | |
1501 // Get the internal ID of the current resource | |
1502 int64_t resource = toExplore.top(); | |
1503 toExplore.pop(); | |
1504 | |
1247 | 1505 if (db_.GetResourceType(resource) == ResourceType_Instance) |
304 | 1506 { |
1247 | 1507 result.push_back(db_.GetPublicId(resource)); |
304 | 1508 } |
1509 else | |
1510 { | |
1511 // Tag all the children of this resource as to be explored | |
1247 | 1512 db_.GetChildrenInternalId(tmp, resource); |
304 | 1513 for (std::list<int64_t>::const_iterator |
656 | 1514 it = tmp.begin(); it != tmp.end(); ++it) |
304 | 1515 { |
1516 toExplore.push(*it); | |
1517 } | |
1518 } | |
1519 } | |
1520 } | |
1521 | |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1522 |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1523 void ServerIndex::SetMetadata(const std::string& publicId, |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1524 MetadataType type, |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1525 const std::string& value) |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1526 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1527 boost::mutex::scoped_lock lock(mutex_); |
1773
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
1528 Transaction t(*this); |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1529 |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1530 ResourceType rtype; |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1531 int64_t id; |
1294 | 1532 if (!db_.LookupResource(id, rtype, publicId)) |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1533 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1534 throw OrthancException(ErrorCode_UnknownResource); |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1535 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1536 |
1247 | 1537 db_.SetMetadata(id, type, value); |
1773
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
1538 |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
1539 if (IsUserMetadata(type)) |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
1540 { |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
1541 LogChange(id, ChangeType_UpdatedMetadata, rtype, publicId); |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
1542 } |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
1543 |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
1544 t.Commit(0); |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1545 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1546 |
438 | 1547 |
1548 void ServerIndex::DeleteMetadata(const std::string& publicId, | |
1549 MetadataType type) | |
1550 { | |
1551 boost::mutex::scoped_lock lock(mutex_); | |
1773
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
1552 Transaction t(*this); |
438 | 1553 |
1554 ResourceType rtype; | |
1555 int64_t id; | |
1294 | 1556 if (!db_.LookupResource(id, rtype, publicId)) |
438 | 1557 { |
1558 throw OrthancException(ErrorCode_UnknownResource); | |
1559 } | |
1560 | |
1247 | 1561 db_.DeleteMetadata(id, type); |
1773
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
1562 |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
1563 if (IsUserMetadata(type)) |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
1564 { |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
1565 LogChange(id, ChangeType_UpdatedMetadata, rtype, publicId); |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
1566 } |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
1567 |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
1568 t.Commit(0); |
438 | 1569 } |
1570 | |
1571 | |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1572 bool ServerIndex::LookupMetadata(std::string& target, |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1573 const std::string& publicId, |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1574 MetadataType type) |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1575 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1576 boost::mutex::scoped_lock lock(mutex_); |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1577 |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1578 ResourceType rtype; |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1579 int64_t id; |
1294 | 1580 if (!db_.LookupResource(id, rtype, publicId)) |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1581 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1582 throw OrthancException(ErrorCode_UnknownResource); |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1583 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1584 |
1247 | 1585 return db_.LookupMetadata(target, id, type); |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1586 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1587 |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1588 |
739 | 1589 void ServerIndex::ListAvailableMetadata(std::list<MetadataType>& target, |
436
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1590 const std::string& publicId) |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1591 { |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1592 boost::mutex::scoped_lock lock(mutex_); |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1593 |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1594 ResourceType rtype; |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1595 int64_t id; |
1294 | 1596 if (!db_.LookupResource(id, rtype, publicId)) |
436
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1597 { |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1598 throw OrthancException(ErrorCode_UnknownResource); |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1599 } |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1600 |
1247 | 1601 db_.ListAvailableMetadata(target, id); |
436
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1602 } |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1603 |
d51186bf7602
read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
434
diff
changeset
|
1604 |
697
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1605 void ServerIndex::ListAvailableAttachments(std::list<FileContentType>& target, |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1606 const std::string& publicId, |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1607 ResourceType expectedType) |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1608 { |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1609 boost::mutex::scoped_lock lock(mutex_); |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1610 |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1611 ResourceType type; |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1612 int64_t id; |
1294 | 1613 if (!db_.LookupResource(id, type, publicId) || |
697
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1614 expectedType != type) |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1615 { |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1616 throw OrthancException(ErrorCode_UnknownResource); |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1617 } |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1618 |
1247 | 1619 db_.ListAvailableAttachments(target, id); |
697
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1620 } |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1621 |
dd1ce9a2844c
access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
689
diff
changeset
|
1622 |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1623 bool ServerIndex::LookupParent(std::string& target, |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1624 const std::string& publicId) |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1625 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1626 boost::mutex::scoped_lock lock(mutex_); |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1627 |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1628 ResourceType type; |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1629 int64_t id; |
1294 | 1630 if (!db_.LookupResource(id, type, publicId)) |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1631 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1632 throw OrthancException(ErrorCode_UnknownResource); |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1633 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1634 |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1635 int64_t parentId; |
1247 | 1636 if (db_.LookupParent(parentId, id)) |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1637 { |
1247 | 1638 target = db_.GetPublicId(parentId); |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1639 return true; |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1640 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1641 else |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1642 { |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1643 return false; |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1644 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
1645 } |
310 | 1646 |
1647 | |
1648 uint64_t ServerIndex::IncrementGlobalSequence(GlobalProperty sequence) | |
1649 { | |
1650 boost::mutex::scoped_lock lock(mutex_); | |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1651 Transaction transaction(*this); |
311 | 1652 |
1237 | 1653 uint64_t seq = IncrementGlobalSequenceInternal(sequence); |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1654 transaction.Commit(0); |
311 | 1655 |
1656 return seq; | |
310 | 1657 } |
315 | 1658 |
1659 | |
1660 | |
1661 void ServerIndex::LogChange(ChangeType changeType, | |
1662 const std::string& publicId) | |
1663 { | |
1664 boost::mutex::scoped_lock lock(mutex_); | |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1665 Transaction transaction(*this); |
315 | 1666 |
1667 int64_t id; | |
1668 ResourceType type; | |
1294 | 1669 if (!db_.LookupResource(id, type, publicId)) |
315 | 1670 { |
1671 throw OrthancException(ErrorCode_UnknownResource); | |
1672 } | |
1673 | |
1237 | 1674 LogChange(id, changeType, type, publicId); |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1675 transaction.Commit(0); |
315 | 1676 } |
413
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1677 |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1678 |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1679 void ServerIndex::DeleteChanges() |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1680 { |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1681 boost::mutex::scoped_lock lock(mutex_); |
1286 | 1682 db_.ClearChanges(); |
413
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1683 } |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1684 |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1685 void ServerIndex::DeleteExportedResources() |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1686 { |
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1687 boost::mutex::scoped_lock lock(mutex_); |
1286 | 1688 db_.ClearExportedResources(); |
413
47d63c941902
clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
1689 } |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1690 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1691 |
646 | 1692 void ServerIndex::GetStatisticsInternal(/* out */ uint64_t& compressedSize, |
1693 /* out */ uint64_t& uncompressedSize, | |
1694 /* out */ unsigned int& countStudies, | |
1695 /* out */ unsigned int& countSeries, | |
1696 /* out */ unsigned int& countInstances, | |
1697 /* in */ int64_t id, | |
1698 /* in */ ResourceType type) | |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1699 { |
646 | 1700 std::stack<int64_t> toExplore; |
1701 toExplore.push(id); | |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1702 |
646 | 1703 countInstances = 0; |
1704 countSeries = 0; | |
1705 countStudies = 0; | |
1706 compressedSize = 0; | |
1707 uncompressedSize = 0; | |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1708 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1709 while (!toExplore.empty()) |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1710 { |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1711 // Get the internal ID of the current resource |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1712 int64_t resource = toExplore.top(); |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1713 toExplore.pop(); |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1714 |
1247 | 1715 ResourceType thisType = db_.GetResourceType(resource); |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1716 |
702
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1717 std::list<FileContentType> f; |
1247 | 1718 db_.ListAvailableAttachments(f, resource); |
702
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1719 |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1720 for (std::list<FileContentType>::const_iterator |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1721 it = f.begin(); it != f.end(); ++it) |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1722 { |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1723 FileInfo attachment; |
1247 | 1724 if (db_.LookupAttachment(attachment, resource, *it)) |
702
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1725 { |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1726 compressedSize += attachment.GetCompressedSize(); |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1727 uncompressedSize += attachment.GetUncompressedSize(); |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1728 } |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1729 } |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1730 |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1731 if (thisType == ResourceType_Instance) |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1732 { |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1733 countInstances++; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1734 } |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1735 else |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1736 { |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1737 switch (thisType) |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1738 { |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1739 case ResourceType_Study: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1740 countStudies++; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1741 break; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1742 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1743 case ResourceType_Series: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1744 countSeries++; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1745 break; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1746 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1747 default: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1748 break; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1749 } |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1750 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1751 // Tag all the children of this resource as to be explored |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1752 std::list<int64_t> tmp; |
1247 | 1753 db_.GetChildrenInternalId(tmp, resource); |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1754 for (std::list<int64_t>::const_iterator |
656 | 1755 it = tmp.begin(); it != tmp.end(); ++it) |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1756 { |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1757 toExplore.push(*it); |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1758 } |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1759 } |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1760 } |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1761 |
646 | 1762 if (countStudies == 0) |
1763 { | |
1764 countStudies = 1; | |
1765 } | |
1766 | |
1767 if (countSeries == 0) | |
1768 { | |
1769 countSeries = 1; | |
1770 } | |
1771 } | |
1772 | |
1773 | |
1774 | |
1775 void ServerIndex::GetStatistics(Json::Value& target, | |
1776 const std::string& publicId) | |
1777 { | |
1778 boost::mutex::scoped_lock lock(mutex_); | |
1779 | |
1780 ResourceType type; | |
1781 int64_t top; | |
1294 | 1782 if (!db_.LookupResource(top, type, publicId)) |
646 | 1783 { |
1784 throw OrthancException(ErrorCode_UnknownResource); | |
1785 } | |
1786 | |
1787 uint64_t uncompressedSize; | |
1788 uint64_t compressedSize; | |
1789 unsigned int countStudies; | |
1790 unsigned int countSeries; | |
1791 unsigned int countInstances; | |
1792 GetStatisticsInternal(compressedSize, uncompressedSize, countStudies, | |
1793 countSeries, countInstances, top, type); | |
1794 | |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1795 target = Json::objectValue; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1796 target["DiskSize"] = boost::lexical_cast<std::string>(compressedSize); |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1797 target["DiskSizeMB"] = static_cast<unsigned int>(compressedSize / MEGA_BYTES); |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1798 target["UncompressedSize"] = boost::lexical_cast<std::string>(uncompressedSize); |
1310
61ce8147f30d
custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1306
diff
changeset
|
1799 target["UncompressedSizeMB"] = static_cast<unsigned int>(uncompressedSize / MEGA_BYTES); |
440
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1800 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1801 switch (type) |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1802 { |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1803 // Do NOT add "break" below this point! |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1804 case ResourceType_Patient: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1805 target["CountStudies"] = countStudies; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1806 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1807 case ResourceType_Study: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1808 target["CountSeries"] = countSeries; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1809 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1810 case ResourceType_Series: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1811 target["CountInstances"] = countInstances; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1812 |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1813 case ResourceType_Instance: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1814 default: |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1815 break; |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1816 } |
23e5b35e3c5c
statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
438
diff
changeset
|
1817 } |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1818 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1819 |
646 | 1820 void ServerIndex::GetStatistics(/* out */ uint64_t& compressedSize, |
1821 /* out */ uint64_t& uncompressedSize, | |
1822 /* out */ unsigned int& countStudies, | |
1823 /* out */ unsigned int& countSeries, | |
1824 /* out */ unsigned int& countInstances, | |
1825 const std::string& publicId) | |
1826 { | |
1827 boost::mutex::scoped_lock lock(mutex_); | |
1828 | |
1829 ResourceType type; | |
1830 int64_t top; | |
1294 | 1831 if (!db_.LookupResource(top, type, publicId)) |
646 | 1832 { |
1833 throw OrthancException(ErrorCode_UnknownResource); | |
1834 } | |
1835 | |
1836 GetStatisticsInternal(compressedSize, uncompressedSize, countStudies, | |
1837 countSeries, countInstances, top, type); | |
1838 } | |
1839 | |
1840 | |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1841 void ServerIndex::UnstableResourcesMonitorThread(ServerIndex* that) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1842 { |
810
401a9633e492
configuration into a namespace
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
744
diff
changeset
|
1843 int stableAge = Configuration::GetGlobalIntegerParameter("StableAge", 60); |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1844 if (stableAge <= 0) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1845 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1846 stableAge = 60; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1847 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1848 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1849 LOG(INFO) << "Starting the monitor for stable resources (stable age = " << stableAge << ")"; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1850 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1851 while (!that->done_) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1852 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1853 // Check for stable resources each second |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1854 boost::this_thread::sleep(boost::posix_time::seconds(1)); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1855 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1856 boost::mutex::scoped_lock lock(that->mutex_); |
513 | 1857 |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1858 while (!that->unstableResources_.IsEmpty() && |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1859 that->unstableResources_.GetOldestPayload().GetAge() > static_cast<unsigned int>(stableAge)) |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1860 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1861 // This DICOM resource has not received any new instance for |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1862 // some time. It can be considered as stable. |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1863 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1864 UnstableResourcePayload payload; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1865 int64_t id = that->unstableResources_.RemoveOldest(payload); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1866 |
513 | 1867 // Ensure that the resource is still existing before logging the change |
1247 | 1868 if (that->db_.IsExistingResource(id)) |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1869 { |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1870 switch (payload.GetResourceType()) |
513 | 1871 { |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1872 case ResourceType_Patient: |
1237 | 1873 that->LogChange(id, ChangeType_StablePatient, ResourceType_Patient, payload.GetPublicId()); |
513 | 1874 break; |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1875 |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1876 case ResourceType_Study: |
1237 | 1877 that->LogChange(id, ChangeType_StableStudy, ResourceType_Study, payload.GetPublicId()); |
513 | 1878 break; |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1879 |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1880 case ResourceType_Series: |
1237 | 1881 that->LogChange(id, ChangeType_StableSeries, ResourceType_Series, payload.GetPublicId()); |
513 | 1882 break; |
1883 | |
1884 default: | |
1885 throw OrthancException(ErrorCode_InternalError); | |
1886 } | |
1887 | |
1888 //LOG(INFO) << "Stable resource: " << EnumerationToString(payload.type_) << " " << id; | |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1889 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1890 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1891 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1892 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1893 LOG(INFO) << "Closing the monitor thread for stable resources"; |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1894 } |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1895 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1896 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1897 void ServerIndex::MarkAsUnstable(int64_t id, |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1898 Orthanc::ResourceType type, |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1899 const std::string& publicId) |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1900 { |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1901 // WARNING: Before calling this method, "mutex_" must be locked. |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1902 |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1903 assert(type == Orthanc::ResourceType_Patient || |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1904 type == Orthanc::ResourceType_Study || |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1905 type == Orthanc::ResourceType_Series); |
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1906 |
1177
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1907 UnstableResourcePayload payload(type, publicId); |
5b2d8c280ac2
Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1162
diff
changeset
|
1908 unstableResources_.AddOrMakeMostRecent(id, payload); |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1909 //LOG(INFO) << "Unstable resource: " << EnumerationToString(type) << " " << id; |
1189
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1177
diff
changeset
|
1910 |
1237 | 1911 LogChange(id, ChangeType_NewChildInstance, type, publicId); |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
1912 } |
521 | 1913 |
1914 | |
1915 | |
1728
4941494b5dd8
rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1727
diff
changeset
|
1916 void ServerIndex::LookupIdentifierExact(std::list<std::string>& result, |
4941494b5dd8
rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1727
diff
changeset
|
1917 ResourceType level, |
4941494b5dd8
rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1727
diff
changeset
|
1918 const DicomTag& tag, |
4941494b5dd8
rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1727
diff
changeset
|
1919 const std::string& value) |
615 | 1920 { |
1727 | 1921 assert((level == ResourceType_Patient && tag == DICOM_TAG_PATIENT_ID) || |
1922 (level == ResourceType_Study && tag == DICOM_TAG_STUDY_INSTANCE_UID) || | |
1923 (level == ResourceType_Study && tag == DICOM_TAG_ACCESSION_NUMBER) || | |
1924 (level == ResourceType_Series && tag == DICOM_TAG_SERIES_INSTANCE_UID) || | |
1925 (level == ResourceType_Instance && tag == DICOM_TAG_SOP_INSTANCE_UID)); | |
1725 | 1926 |
615 | 1927 result.clear(); |
1928 | |
1929 boost::mutex::scoped_lock lock(mutex_); | |
1930 | |
1746 | 1931 LookupIdentifierQuery query(level); |
1932 query.AddConstraint(tag, IdentifierConstraintType_Equal, value); | |
1933 query.Apply(result, db_); | |
615 | 1934 } |
1935 | |
1936 | |
699
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1937 StoreStatus ServerIndex::AddAttachment(const FileInfo& attachment, |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1938 const std::string& publicId) |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1939 { |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1940 boost::mutex::scoped_lock lock(mutex_); |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1941 |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1942 Transaction t(*this); |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1943 |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1944 ResourceType resourceType; |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1945 int64_t resourceId; |
1294 | 1946 if (!db_.LookupResource(resourceId, resourceType, publicId)) |
699
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1947 { |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1948 return StoreStatus_Failure; // Inexistent resource |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1949 } |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1950 |
704
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1951 // Remove possible previous attachment |
1247 | 1952 db_.DeleteAttachment(resourceId, attachment.GetContentType()); |
699
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1953 |
704
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1954 // Locate the patient of the target resource |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1955 int64_t patientId = resourceId; |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1956 for (;;) |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1957 { |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1958 int64_t parent; |
1247 | 1959 if (db_.LookupParent(parent, patientId)) |
704
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1960 { |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1961 // We have not reached the patient level yet |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1962 patientId = parent; |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1963 } |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1964 else |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1965 { |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1966 // We have reached the patient level |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1967 break; |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1968 } |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1969 } |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1970 |
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1971 // Possibly apply the recycling mechanism while preserving this patient |
1247 | 1972 assert(db_.GetResourceType(patientId) == ResourceType_Patient); |
1973 Recycle(attachment.GetCompressedSize(), db_.GetPublicId(patientId)); | |
704
4789da60d655
recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
702
diff
changeset
|
1974 |
1247 | 1975 db_.AddAttachment(resourceId, attachment); |
699
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1976 |
1773
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
1977 if (IsUserContentType(attachment.GetContentType())) |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
1978 { |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
1979 LogChange(resourceId, ChangeType_UpdatedAttachment, resourceType, publicId); |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
1980 } |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
1981 |
699
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1982 t.Commit(attachment.GetCompressedSize()); |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1983 |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1984 return StoreStatus_Success; |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1985 } |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1986 |
702
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1987 |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1988 void ServerIndex::DeleteAttachment(const std::string& publicId, |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1989 FileContentType type) |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1990 { |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1991 boost::mutex::scoped_lock lock(mutex_); |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1992 Transaction t(*this); |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1993 |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1994 ResourceType rtype; |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1995 int64_t id; |
1294 | 1996 if (!db_.LookupResource(id, rtype, publicId)) |
702
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1997 { |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1998 throw OrthancException(ErrorCode_UnknownResource); |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
1999 } |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2000 |
1247 | 2001 db_.DeleteAttachment(id, type); |
702
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2002 |
1773
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
2003 if (IsUserContentType(type)) |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
2004 { |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
2005 LogChange(id, ChangeType_UpdatedAttachment, rtype, publicId); |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
2006 } |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1757
diff
changeset
|
2007 |
702
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2008 t.Commit(0); |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2009 } |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2010 |
7592a48e97e4
delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
701
diff
changeset
|
2011 |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2012 bool ServerIndex::GetMetadata(Json::Value& target, |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2013 const std::string& publicId) |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2014 { |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2015 boost::mutex::scoped_lock lock(mutex_); |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2016 |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2017 target = Json::objectValue; |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2018 |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2019 ResourceType type; |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2020 int64_t id; |
1294 | 2021 if (!db_.LookupResource(id, type, publicId)) |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2022 { |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2023 return false; |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2024 } |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2025 |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2026 std::list<MetadataType> metadata; |
1247 | 2027 db_.ListAvailableMetadata(metadata, id); |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2028 |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2029 for (std::list<MetadataType>::const_iterator |
1304 | 2030 it = metadata.begin(); it != metadata.end(); ++it) |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2031 { |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2032 std::string key = EnumerationToString(*it); |
1238 | 2033 |
2034 std::string value; | |
1247 | 2035 if (!db_.LookupMetadata(value, id, *it)) |
1238 | 2036 { |
2037 value.clear(); | |
2038 } | |
2039 | |
1002
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2040 target[key] = value; |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2041 } |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2042 |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2043 return true; |
b067017a8a5b
anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
2044 } |
1218
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
2045 |
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
2046 |
1249
40725595aaf0
Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1247
diff
changeset
|
2047 void ServerIndex::SetGlobalProperty(GlobalProperty property, |
40725595aaf0
Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1247
diff
changeset
|
2048 const std::string& value) |
40725595aaf0
Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1247
diff
changeset
|
2049 { |
40725595aaf0
Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1247
diff
changeset
|
2050 boost::mutex::scoped_lock lock(mutex_); |
40725595aaf0
Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1247
diff
changeset
|
2051 db_.SetGlobalProperty(property, value); |
40725595aaf0
Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1247
diff
changeset
|
2052 } |
40725595aaf0
Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1247
diff
changeset
|
2053 |
40725595aaf0
Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1247
diff
changeset
|
2054 |
1218
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
2055 std::string ServerIndex::GetGlobalProperty(GlobalProperty property, |
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
2056 const std::string& defaultValue) |
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
2057 { |
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
2058 boost::mutex::scoped_lock lock(mutex_); |
1239 | 2059 |
2060 std::string value; | |
1247 | 2061 if (db_.LookupGlobalProperty(value, property)) |
1239 | 2062 { |
2063 return value; | |
2064 } | |
2065 else | |
2066 { | |
2067 return defaultValue; | |
2068 } | |
1218
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
2069 } |
efece308018e
report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
2070 |
1352 | 2071 |
2072 bool ServerIndex::GetMainDicomTags(DicomMap& result, | |
2073 const std::string& publicId, | |
1677
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2074 ResourceType expectedType, |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2075 ResourceType levelOfInterest) |
1352 | 2076 { |
1677
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2077 // Yes, the following test could be shortened, but we wish to make it as clear as possible |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2078 if (!(expectedType == ResourceType_Patient && levelOfInterest == ResourceType_Patient) && |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2079 !(expectedType == ResourceType_Study && levelOfInterest == ResourceType_Patient) && |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2080 !(expectedType == ResourceType_Study && levelOfInterest == ResourceType_Study) && |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2081 !(expectedType == ResourceType_Series && levelOfInterest == ResourceType_Series) && |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2082 !(expectedType == ResourceType_Instance && levelOfInterest == ResourceType_Instance)) |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2083 { |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2084 throw OrthancException(ErrorCode_ParameterOutOfRange); |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2085 } |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2086 |
1352 | 2087 result.Clear(); |
2088 | |
2089 boost::mutex::scoped_lock lock(mutex_); | |
2090 | |
2091 // Lookup for the requested resource | |
2092 int64_t id; | |
2093 ResourceType type; | |
2094 if (!db_.LookupResource(id, type, publicId) || | |
2095 type != expectedType) | |
2096 { | |
2097 return false; | |
2098 } | |
1677
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2099 |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2100 if (type == ResourceType_Study) |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2101 { |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2102 DicomMap tmp; |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2103 db_.GetMainDicomTags(tmp, id); |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2104 |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2105 switch (levelOfInterest) |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2106 { |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2107 case ResourceType_Patient: |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2108 tmp.ExtractPatientInformation(result); |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2109 return true; |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2110 |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2111 case ResourceType_Study: |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2112 tmp.ExtractStudyInformation(result); |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2113 return true; |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2114 |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2115 default: |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2116 throw OrthancException(ErrorCode_InternalError); |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2117 } |
a903d57d9f0c
adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1676
diff
changeset
|
2118 } |
1352 | 2119 else |
2120 { | |
2121 db_.GetMainDicomTags(result, id); | |
2122 return true; | |
2123 } | |
2124 } | |
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2125 |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2126 |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2127 bool ServerIndex::LookupResourceType(ResourceType& type, |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2128 const std::string& publicId) |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2129 { |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2130 boost::mutex::scoped_lock lock(mutex_); |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2131 |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2132 int64_t id; |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2133 return db_.LookupResource(id, type, publicId); |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2134 } |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2135 |
1668
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2136 |
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2137 unsigned int ServerIndex::GetDatabaseVersion() |
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2138 { |
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2139 boost::mutex::scoped_lock lock(mutex_); |
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2140 return db_.GetDatabaseVersion(); |
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2141 } |
1750
55d52567bebb
LookupResource implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1747
diff
changeset
|
2142 |
55d52567bebb
LookupResource implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1747
diff
changeset
|
2143 |
1753 | 2144 void ServerIndex::FindCandidates(std::vector<std::string>& resources, |
2145 std::vector<std::string>& instances, | |
1757
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1754
diff
changeset
|
2146 const ::Orthanc::LookupResource& lookup) |
1750
55d52567bebb
LookupResource implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1747
diff
changeset
|
2147 { |
1753 | 2148 boost::mutex::scoped_lock lock(mutex_); |
2149 | |
2150 std::list<int64_t> tmp; | |
2151 lookup.FindCandidates(tmp, db_); | |
2152 | |
2153 resources.resize(tmp.size()); | |
2154 instances.resize(tmp.size()); | |
2155 | |
2156 size_t pos = 0; | |
2157 for (std::list<int64_t>::const_iterator | |
2158 it = tmp.begin(); it != tmp.end(); ++it, pos++) | |
2159 { | |
1754 | 2160 assert(db_.GetResourceType(*it) == lookup.GetLevel()); |
2161 | |
1753 | 2162 int64_t instance; |
2163 if (!Toolbox::FindOneChildInstance(instance, db_, *it, lookup.GetLevel())) | |
2164 { | |
2165 throw OrthancException(ErrorCode_InternalError); | |
2166 } | |
2167 | |
2168 resources[pos] = db_.GetPublicId(*it); | |
2169 instances[pos] = db_.GetPublicId(instance); | |
2170 } | |
1750
55d52567bebb
LookupResource implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1747
diff
changeset
|
2171 } |
0 | 2172 } |