Mercurial > hg > orthanc
annotate OrthancServer/ServerIndex.cpp @ 1452:b737acb13da5
refactoring of the main function
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Thu, 02 Jul 2015 11:35:41 +0200 |
parents | 0ac74fa21db8 |
children | c0bdc47165ef |
rev | line source |
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0 | 1 /** |
62 | 2 * Orthanc - A Lightweight, RESTful DICOM Store |
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3 * Copyright (C) 2012-2015 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
0 | 5 * |
6 * This program is free software: you can redistribute it and/or | |
7 * modify it under the terms of the GNU General Public License as | |
8 * published by the Free Software Foundation, either version 3 of the | |
9 * License, or (at your option) any later version. | |
136 | 10 * |
11 * In addition, as a special exception, the copyright holders of this | |
12 * program give permission to link the code of its release with the | |
13 * OpenSSL project's "OpenSSL" library (or with modified versions of it | |
14 * that use the same license as the "OpenSSL" library), and distribute | |
15 * the linked executables. You must obey the GNU General Public License | |
16 * in all respects for all of the code used other than "OpenSSL". If you | |
17 * modify file(s) with this exception, you may extend this exception to | |
18 * your version of the file(s), but you are not obligated to do so. If | |
19 * you do not wish to do so, delete this exception statement from your | |
20 * version. If you delete this exception statement from all source files | |
21 * in the program, then also delete it here. | |
0 | 22 * |
23 * This program is distributed in the hope that it will be useful, but | |
24 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
26 * General Public License for more details. | |
27 * | |
28 * You should have received a copy of the GNU General Public License | |
29 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
30 **/ | |
31 | |
32 | |
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33 #include "PrecompiledHeadersServer.h" |
0 | 34 #include "ServerIndex.h" |
35 | |
6 | 36 #ifndef NOMINMAX |
2 | 37 #define NOMINMAX |
6 | 38 #endif |
39 | |
1198 | 40 #include "ServerIndexChange.h" |
8 | 41 #include "EmbeddedResources.h" |
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42 #include "OrthancInitialization.h" |
0 | 43 #include "../Core/Toolbox.h" |
44 #include "../Core/Uuid.h" | |
45 #include "../Core/DicomFormat/DicomArray.h" | |
46 #include "FromDcmtkBridge.h" | |
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47 #include "ServerContext.h" |
0 | 48 |
49 #include <boost/lexical_cast.hpp> | |
50 #include <stdio.h> | |
108 | 51 #include <glog/logging.h> |
0 | 52 |
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53 static const uint64_t MEGA_BYTES = 1024 * 1024; |
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54 |
62 | 55 namespace Orthanc |
0 | 56 { |
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57 class ServerIndex::Listener : public IDatabaseListener |
0 | 58 { |
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59 private: |
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60 struct FileToRemove |
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61 { |
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62 private: |
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63 std::string uuid_; |
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64 FileContentType type_; |
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65 |
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66 public: |
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67 FileToRemove(const FileInfo& info) : uuid_(info.GetUuid()), |
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68 type_(info.GetContentType()) |
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69 { |
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70 } |
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71 |
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72 const std::string& GetUuid() const |
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73 { |
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74 return uuid_; |
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75 } |
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76 |
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77 FileContentType GetContentType() const |
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78 { |
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79 return type_; |
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80 } |
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81 }; |
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82 |
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83 ServerContext& context_; |
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84 bool hasRemainingLevel_; |
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85 ResourceType remainingType_; |
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86 std::string remainingPublicId_; |
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87 std::list<FileToRemove> pendingFilesToRemove_; |
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88 std::list<ServerIndexChange> pendingChanges_; |
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89 uint64_t sizeOfFilesToRemove_; |
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90 bool insideTransaction_; |
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91 |
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92 void Reset() |
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93 { |
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94 sizeOfFilesToRemove_ = 0; |
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95 hasRemainingLevel_ = false; |
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96 pendingFilesToRemove_.clear(); |
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97 pendingChanges_.clear(); |
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98 } |
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99 |
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100 public: |
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101 Listener(ServerContext& context) : context_(context), |
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102 insideTransaction_(false) |
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103 { |
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104 Reset(); |
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105 assert(ResourceType_Patient < ResourceType_Study && |
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106 ResourceType_Study < ResourceType_Series && |
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107 ResourceType_Series < ResourceType_Instance); |
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108 } |
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109 |
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110 void StartTransaction() |
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111 { |
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112 Reset(); |
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113 insideTransaction_ = true; |
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114 } |
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115 |
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116 void EndTransaction() |
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117 { |
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118 insideTransaction_ = false; |
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119 } |
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120 |
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121 uint64_t GetSizeOfFilesToRemove() |
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122 { |
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123 return sizeOfFilesToRemove_; |
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124 } |
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125 |
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126 void CommitFilesToRemove() |
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127 { |
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128 for (std::list<FileToRemove>::const_iterator |
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129 it = pendingFilesToRemove_.begin(); |
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130 it != pendingFilesToRemove_.end(); ++it) |
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131 { |
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132 context_.RemoveFile(it->GetUuid(), it->GetContentType()); |
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133 } |
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134 } |
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135 |
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136 void CommitChanges() |
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137 { |
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138 for (std::list<ServerIndexChange>::const_iterator |
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139 it = pendingChanges_.begin(); |
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140 it != pendingChanges_.end(); ++it) |
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141 { |
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142 context_.SignalChange(*it); |
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143 } |
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144 } |
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145 |
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146 virtual void SignalRemainingAncestor(ResourceType parentType, |
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147 const std::string& publicId) |
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148 { |
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149 VLOG(1) << "Remaining ancestor \"" << publicId << "\" (" << parentType << ")"; |
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150 |
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151 if (hasRemainingLevel_) |
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152 { |
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153 if (parentType < remainingType_) |
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154 { |
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155 remainingType_ = parentType; |
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156 remainingPublicId_ = publicId; |
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157 } |
1158 | 158 } |
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159 else |
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160 { |
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161 hasRemainingLevel_ = true; |
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162 remainingType_ = parentType; |
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163 remainingPublicId_ = publicId; |
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164 } |
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165 } |
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166 |
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167 virtual void SignalFileDeleted(const FileInfo& info) |
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168 { |
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169 assert(Toolbox::IsUuid(info.GetUuid())); |
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170 pendingFilesToRemove_.push_back(FileToRemove(info)); |
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171 sizeOfFilesToRemove_ += info.GetCompressedSize(); |
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172 } |
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173 |
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174 virtual void SignalChange(const ServerIndexChange& change) |
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175 { |
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176 VLOG(1) << "Change related to resource " << change.GetPublicId() << " of type " |
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177 << EnumerationToString(change.GetResourceType()) << ": " |
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178 << EnumerationToString(change.GetChangeType()); |
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179 |
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180 if (insideTransaction_) |
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181 { |
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182 pendingChanges_.push_back(change); |
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183 } |
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184 else |
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185 { |
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186 context_.SignalChange(change); |
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187 } |
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188 } |
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189 |
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190 bool HasRemainingLevel() const |
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191 { |
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192 return hasRemainingLevel_; |
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193 } |
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194 |
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195 ResourceType GetRemainingType() const |
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196 { |
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197 assert(HasRemainingLevel()); |
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198 return remainingType_; |
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199 } |
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200 |
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201 const std::string& GetRemainingPublicId() const |
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202 { |
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203 assert(HasRemainingLevel()); |
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204 return remainingPublicId_; |
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205 } |
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206 }; |
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208 | |
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209 class ServerIndex::Transaction |
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210 { |
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211 private: |
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212 ServerIndex& index_; |
1235 | 213 std::auto_ptr<SQLite::ITransaction> transaction_; |
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214 bool isCommitted_; |
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215 |
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216 public: |
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217 Transaction(ServerIndex& index) : |
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218 index_(index), |
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219 isCommitted_(false) |
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220 { |
1247 | 221 transaction_.reset(index_.db_.StartTransaction()); |
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222 transaction_->Begin(); |
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223 |
1270 | 224 assert(index_.currentStorageSize_ == index_.db_.GetTotalCompressedSize()); |
225 | |
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226 index_.listener_->StartTransaction(); |
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227 } |
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228 |
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229 ~Transaction() |
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230 { |
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231 index_.listener_->EndTransaction(); |
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232 |
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233 if (!isCommitted_) |
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234 { |
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235 transaction_->Rollback(); |
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236 } |
278
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237 } |
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238 |
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239 void Commit(uint64_t sizeOfAddedFiles) |
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240 { |
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241 if (!isCommitted_) |
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242 { |
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243 transaction_->Commit(); |
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244 |
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245 // We can remove the files once the SQLite transaction has |
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246 // been successfully committed. Some files might have to be |
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247 // deleted because of recycling. |
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248 index_.listener_->CommitFilesToRemove(); |
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249 |
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250 index_.currentStorageSize_ += sizeOfAddedFiles; |
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251 |
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252 assert(index_.currentStorageSize_ >= index_.listener_->GetSizeOfFilesToRemove()); |
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253 index_.currentStorageSize_ -= index_.listener_->GetSizeOfFilesToRemove(); |
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254 |
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255 // Send all the pending changes to the Orthanc plugins |
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256 index_.listener_->CommitChanges(); |
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257 |
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258 isCommitted_ = true; |
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259 } |
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260 } |
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261 }; |
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262 |
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263 |
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264 class ServerIndex::UnstableResourcePayload |
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265 { |
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266 private: |
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267 ResourceType type_; |
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268 std::string publicId_; |
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269 boost::posix_time::ptime time_; |
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270 |
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271 public: |
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272 UnstableResourcePayload() : type_(ResourceType_Instance) |
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273 { |
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274 } |
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275 |
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276 UnstableResourcePayload(Orthanc::ResourceType type, |
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277 const std::string& publicId) : |
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278 type_(type), |
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279 publicId_(publicId) |
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280 { |
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281 time_ = boost::posix_time::second_clock::local_time(); |
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282 } |
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283 |
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284 unsigned int GetAge() const |
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285 { |
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286 return (boost::posix_time::second_clock::local_time() - time_).total_seconds(); |
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287 } |
1177
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288 |
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289 ResourceType GetResourceType() const |
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290 { |
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291 return type_; |
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292 } |
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293 |
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294 const std::string& GetPublicId() const |
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295 { |
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296 return publicId_; |
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297 } |
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298 }; |
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299 |
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300 |
212 | 301 bool ServerIndex::DeleteResource(Json::Value& target, |
0 | 302 const std::string& uuid, |
202 | 303 ResourceType expectedType) |
0 | 304 { |
206
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305 boost::mutex::scoped_lock lock(mutex_); |
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306 |
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307 Transaction t(*this); |
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308 |
202 | 309 int64_t id; |
310 ResourceType type; | |
1294 | 311 if (!db_.LookupResource(id, type, uuid) || |
202 | 312 expectedType != type) |
0 | 313 { |
314 return false; | |
315 } | |
202 | 316 |
1247 | 317 db_.DeleteResource(id); |
0 | 318 |
202 | 319 if (listener_->HasRemainingLevel()) |
0 | 320 { |
202 | 321 ResourceType type = listener_->GetRemainingType(); |
322 const std::string& uuid = listener_->GetRemainingPublicId(); | |
0 | 323 |
324 target["RemainingAncestor"] = Json::Value(Json::objectValue); | |
204 | 325 target["RemainingAncestor"]["Path"] = GetBasePath(type, uuid); |
434
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326 target["RemainingAncestor"]["Type"] = EnumerationToString(type); |
0 | 327 target["RemainingAncestor"]["ID"] = uuid; |
328 } | |
329 else | |
330 { | |
331 target["RemainingAncestor"] = Json::nullValue; | |
332 } | |
333 | |
278
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334 t.Commit(0); |
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335 |
0 | 336 return true; |
337 } | |
338 | |
339 | |
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340 void ServerIndex::FlushThread(ServerIndex* that) |
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341 { |
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342 // By default, wait for 10 seconds before flushing |
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343 unsigned int sleep = 10; |
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344 |
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345 try |
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346 { |
744 | 347 boost::mutex::scoped_lock lock(that->mutex_); |
1239 | 348 std::string sleepString; |
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349 |
1247 | 350 if (that->db_.LookupGlobalProperty(sleepString, GlobalProperty_FlushSleep) && |
1239 | 351 Toolbox::IsInteger(sleepString)) |
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352 { |
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353 sleep = boost::lexical_cast<unsigned int>(sleepString); |
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354 } |
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355 } |
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356 catch (boost::bad_lexical_cast&) |
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357 { |
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358 } |
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359 |
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360 LOG(INFO) << "Starting the database flushing thread (sleep = " << sleep << ")"; |
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361 |
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362 unsigned int count = 0; |
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363 |
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364 while (!that->done_) |
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365 { |
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366 boost::this_thread::sleep(boost::posix_time::seconds(1)); |
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367 count++; |
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368 if (count < sleep) |
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369 { |
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370 continue; |
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371 } |
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372 |
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373 boost::mutex::scoped_lock lock(that->mutex_); |
1247 | 374 that->db_.FlushToDisk(); |
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375 count = 0; |
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376 } |
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377 |
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378 LOG(INFO) << "Stopping the database flushing thread"; |
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379 } |
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380 |
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381 |
1247 | 382 static void ComputeExpectedNumberOfInstances(IDatabaseWrapper& db, |
433 | 383 int64_t series, |
384 const DicomMap& dicomSummary) | |
385 { | |
386 try | |
387 { | |
656 | 388 const DicomValue* value; |
389 const DicomValue* value2; | |
390 | |
433 | 391 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_IMAGES_IN_ACQUISITION)) != NULL && |
392 (value2 = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_TEMPORAL_POSITIONS)) != NULL) | |
393 { | |
394 // Patch for series with temporal positions thanks to Will Ryder | |
395 int64_t imagesInAcquisition = boost::lexical_cast<int64_t>(value->AsString()); | |
396 int64_t countTemporalPositions = boost::lexical_cast<int64_t>(value2->AsString()); | |
397 std::string expected = boost::lexical_cast<std::string>(imagesInAcquisition * countTemporalPositions); | |
398 db.SetMetadata(series, MetadataType_Series_ExpectedNumberOfInstances, expected); | |
399 } | |
400 | |
401 else if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_SLICES)) != NULL && | |
402 (value2 = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_TIME_SLICES)) != NULL) | |
403 { | |
404 // Support of Cardio-PET images | |
405 int64_t numberOfSlices = boost::lexical_cast<int64_t>(value->AsString()); | |
406 int64_t numberOfTimeSlices = boost::lexical_cast<int64_t>(value2->AsString()); | |
407 std::string expected = boost::lexical_cast<std::string>(numberOfSlices * numberOfTimeSlices); | |
408 db.SetMetadata(series, MetadataType_Series_ExpectedNumberOfInstances, expected); | |
409 } | |
410 | |
411 else if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES)) != NULL) | |
412 { | |
413 db.SetMetadata(series, MetadataType_Series_ExpectedNumberOfInstances, value->AsString()); | |
414 } | |
415 } | |
416 catch (boost::bad_lexical_cast) | |
417 { | |
418 } | |
419 } | |
420 | |
421 | |
1237 | 422 |
423 | |
1238 | 424 bool ServerIndex::GetMetadataAsInteger(int64_t& result, |
1237 | 425 int64_t id, |
426 MetadataType type) | |
427 { | |
1238 | 428 std::string s; |
1247 | 429 if (!db_.LookupMetadata(s, id, type)) |
1237 | 430 { |
431 return false; | |
432 } | |
433 | |
434 try | |
435 { | |
1238 | 436 result = boost::lexical_cast<int64_t>(s); |
1237 | 437 return true; |
438 } | |
439 catch (boost::bad_lexical_cast&) | |
440 { | |
441 return false; | |
442 } | |
443 } | |
444 | |
445 | |
1297 | 446 void ServerIndex::LogChange(int64_t internalId, |
447 ChangeType changeType, | |
448 ResourceType resourceType, | |
449 const std::string& publicId) | |
450 { | |
451 ServerIndexChange change(changeType, resourceType, publicId); | |
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452 |
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453 if (changeType <= ChangeType_INTERNAL_LastLogged) |
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454 { |
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455 db_.LogChange(internalId, change); |
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456 } |
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457 |
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458 assert(listener_.get() != NULL); |
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459 listener_->SignalChange(change); |
1297 | 460 } |
461 | |
1237 | 462 |
463 uint64_t ServerIndex::IncrementGlobalSequenceInternal(GlobalProperty property) | |
464 { | |
465 std::string oldValue; | |
466 | |
1247 | 467 if (db_.LookupGlobalProperty(oldValue, property)) |
1237 | 468 { |
469 uint64_t oldNumber; | |
470 | |
471 try | |
472 { | |
473 oldNumber = boost::lexical_cast<uint64_t>(oldValue); | |
1247 | 474 db_.SetGlobalProperty(property, boost::lexical_cast<std::string>(oldNumber + 1)); |
1237 | 475 return oldNumber + 1; |
476 } | |
477 catch (boost::bad_lexical_cast&) | |
478 { | |
479 throw OrthancException(ErrorCode_InternalError); | |
480 } | |
481 } | |
482 else | |
483 { | |
484 // Initialize the sequence at "1" | |
1247 | 485 db_.SetGlobalProperty(property, "1"); |
1237 | 486 return 1; |
487 } | |
488 } | |
489 | |
490 | |
491 | |
1286 | 492 void ServerIndex::SetMainDicomTags(int64_t resource, |
493 const DicomMap& tags) | |
494 { | |
495 DicomArray flattened(tags); | |
496 for (size_t i = 0; i < flattened.GetSize(); i++) | |
497 { | |
498 const DicomElement& element = flattened.GetElement(i); | |
499 db_.SetMainDicomTag(resource, element.GetTag(), element.GetValue().AsString()); | |
500 } | |
501 } | |
502 | |
503 | |
1299 | 504 int64_t ServerIndex::CreateResource(const std::string& publicId, |
505 ResourceType type) | |
506 { | |
507 int64_t id = db_.CreateResource(publicId, type); | |
508 | |
509 ChangeType changeType; | |
510 switch (type) | |
511 { | |
512 case ResourceType_Patient: | |
513 changeType = ChangeType_NewPatient; | |
514 break; | |
515 | |
516 case ResourceType_Study: | |
517 changeType = ChangeType_NewStudy; | |
518 break; | |
519 | |
520 case ResourceType_Series: | |
521 changeType = ChangeType_NewSeries; | |
522 break; | |
523 | |
524 case ResourceType_Instance: | |
525 changeType = ChangeType_NewInstance; | |
526 break; | |
527 | |
528 default: | |
529 throw OrthancException(ErrorCode_InternalError); | |
530 } | |
531 | |
532 ServerIndexChange change(changeType, type, publicId); | |
533 db_.LogChange(id, change); | |
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534 |
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535 assert(listener_.get() != NULL); |
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536 listener_->SignalChange(change); |
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537 |
1299 | 538 return id; |
539 } | |
540 | |
1286 | 541 |
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542 ServerIndex::ServerIndex(ServerContext& context, |
1247 | 543 IDatabaseWrapper& db) : |
511
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544 done_(false), |
1247 | 545 db_(db), |
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546 maximumStorageSize_(0), |
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547 maximumPatients_(0) |
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548 { |
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549 listener_.reset(new Listener(context)); |
1247 | 550 db_.SetListener(*listener_); |
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551 |
1247 | 552 currentStorageSize_ = db_.GetTotalCompressedSize(); |
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553 |
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554 // Initial recycling if the parameters have changed since the last |
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555 // execution of Orthanc |
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556 StandaloneRecycling(); |
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557 |
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558 if (db.HasFlushToDisk()) |
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559 { |
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560 flushThread_ = boost::thread(FlushThread, this); |
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561 } |
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562 |
511
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563 unstableResourcesMonitorThread_ = boost::thread(UnstableResourcesMonitorThread, this); |
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564 } |
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565 |
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566 |
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567 ServerIndex::~ServerIndex() |
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568 { |
511
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569 done_ = true; |
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570 |
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571 if (db_.HasFlushToDisk() && |
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572 flushThread_.joinable()) |
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573 { |
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574 flushThread_.join(); |
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575 } |
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576 |
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577 if (unstableResourcesMonitorThread_.joinable()) |
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578 { |
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579 unstableResourcesMonitorThread_.join(); |
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580 } |
0 | 581 } |
582 | |
583 | |
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584 StoreStatus ServerIndex::Store(std::map<MetadataType, std::string>& instanceMetadata, |
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585 const DicomMap& dicomSummary, |
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586 const Attachments& attachments, |
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587 const std::string& remoteAet, |
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588 const MetadataMap& metadata) |
0 | 589 { |
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590 boost::mutex::scoped_lock lock(mutex_); |
0 | 591 |
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592 instanceMetadata.clear(); |
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593 |
178 | 594 DicomInstanceHasher hasher(dicomSummary); |
0 | 595 |
596 try | |
597 { | |
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598 Transaction t(*this); |
0 | 599 |
202 | 600 // Do nothing if the instance already exists |
0 | 601 { |
432 | 602 ResourceType type; |
603 int64_t tmp; | |
1294 | 604 if (db_.LookupResource(tmp, type, hasher.HashInstance())) |
432 | 605 { |
606 assert(type == ResourceType_Instance); | |
1247 | 607 db_.GetAllMetadata(instanceMetadata, tmp); |
432 | 608 return StoreStatus_AlreadyStored; |
609 } | |
0 | 610 } |
611 | |
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612 // Ensure there is enough room in the storage for the new instance |
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613 uint64_t instanceSize = 0; |
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614 for (Attachments::const_iterator it = attachments.begin(); |
656 | 615 it != attachments.end(); ++it) |
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616 { |
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617 instanceSize += it->GetCompressedSize(); |
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618 } |
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619 |
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620 Recycle(instanceSize, hasher.HashPatient()); |
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621 |
202 | 622 // Create the instance |
1299 | 623 int64_t instance = CreateResource(hasher.HashInstance(), ResourceType_Instance); |
202 | 624 |
625 DicomMap dicom; | |
626 dicomSummary.ExtractInstanceInformation(dicom); | |
1286 | 627 SetMainDicomTags(instance, dicom); |
202 | 628 |
432 | 629 // Detect up to which level the patient/study/series/instance |
630 // hierarchy must be created | |
631 int64_t patient = -1, study = -1, series = -1; | |
632 bool isNewPatient = false; | |
633 bool isNewStudy = false; | |
634 bool isNewSeries = false; | |
635 | |
0 | 636 { |
432 | 637 ResourceType dummy; |
638 | |
1294 | 639 if (db_.LookupResource(series, dummy, hasher.HashSeries())) |
432 | 640 { |
641 assert(dummy == ResourceType_Series); | |
642 // The patient, the study and the series already exist | |
643 | |
1294 | 644 bool ok = (db_.LookupResource(patient, dummy, hasher.HashPatient()) && |
645 db_.LookupResource(study, dummy, hasher.HashStudy())); | |
432 | 646 assert(ok); |
647 } | |
1294 | 648 else if (db_.LookupResource(study, dummy, hasher.HashStudy())) |
432 | 649 { |
650 assert(dummy == ResourceType_Study); | |
651 | |
652 // New series: The patient and the study already exist | |
653 isNewSeries = true; | |
654 | |
1294 | 655 bool ok = db_.LookupResource(patient, dummy, hasher.HashPatient()); |
432 | 656 assert(ok); |
657 } | |
1294 | 658 else if (db_.LookupResource(patient, dummy, hasher.HashPatient())) |
432 | 659 { |
660 assert(dummy == ResourceType_Patient); | |
661 | |
662 // New study and series: The patient already exist | |
663 isNewStudy = true; | |
664 isNewSeries = true; | |
665 } | |
666 else | |
667 { | |
668 // New patient, study and series: Nothing exists | |
669 isNewPatient = true; | |
670 isNewStudy = true; | |
671 isNewSeries = true; | |
672 } | |
673 } | |
674 | |
675 // Create the series if needed | |
676 if (isNewSeries) | |
677 { | |
1299 | 678 series = CreateResource(hasher.HashSeries(), ResourceType_Series); |
202 | 679 dicomSummary.ExtractSeriesInformation(dicom); |
1286 | 680 SetMainDicomTags(series, dicom); |
432 | 681 } |
202 | 682 |
432 | 683 // Create the study if needed |
684 if (isNewStudy) | |
685 { | |
1299 | 686 study = CreateResource(hasher.HashStudy(), ResourceType_Study); |
432 | 687 dicomSummary.ExtractStudyInformation(dicom); |
1286 | 688 SetMainDicomTags(study, dicom); |
432 | 689 } |
690 | |
691 // Create the patient if needed | |
692 if (isNewPatient) | |
693 { | |
1299 | 694 patient = CreateResource(hasher.HashPatient(), ResourceType_Patient); |
432 | 695 dicomSummary.ExtractPatientInformation(dicom); |
1286 | 696 SetMainDicomTags(patient, dicom); |
432 | 697 } |
202 | 698 |
432 | 699 // Create the parent-to-child links |
1247 | 700 db_.AttachChild(series, instance); |
432 | 701 |
702 if (isNewSeries) | |
703 { | |
1247 | 704 db_.AttachChild(study, series); |
0 | 705 } |
432 | 706 |
707 if (isNewStudy) | |
0 | 708 { |
1247 | 709 db_.AttachChild(patient, study); |
0 | 710 } |
711 | |
432 | 712 // Sanity checks |
713 assert(patient != -1); | |
714 assert(study != -1); | |
715 assert(series != -1); | |
716 assert(instance != -1); | |
717 | |
202 | 718 // Attach the files to the newly created instance |
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719 for (Attachments::const_iterator it = attachments.begin(); |
656 | 720 it != attachments.end(); ++it) |
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721 { |
1247 | 722 db_.AddAttachment(instance, *it); |
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723 } |
202 | 724 |
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725 // Attach the user-specified metadata |
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726 for (MetadataMap::const_iterator |
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727 it = metadata.begin(); it != metadata.end(); ++it) |
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728 { |
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729 switch (it->first.first) |
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730 { |
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731 case ResourceType_Patient: |
1247 | 732 db_.SetMetadata(patient, it->first.second, it->second); |
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733 break; |
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734 |
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735 case ResourceType_Study: |
1247 | 736 db_.SetMetadata(study, it->first.second, it->second); |
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737 break; |
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738 |
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739 case ResourceType_Series: |
1247 | 740 db_.SetMetadata(series, it->first.second, it->second); |
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741 break; |
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742 |
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743 case ResourceType_Instance: |
1247 | 744 db_.SetMetadata(instance, it->first.second, it->second); |
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745 instanceMetadata[it->first.second] = it->second; |
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746 break; |
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747 |
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748 default: |
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749 throw OrthancException(ErrorCode_ParameterOutOfRange); |
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750 } |
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751 } |
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752 |
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753 // Attach the auto-computed metadata for the patient/study/series levels |
432 | 754 std::string now = Toolbox::GetNowIsoString(); |
1247 | 755 db_.SetMetadata(series, MetadataType_LastUpdate, now); |
756 db_.SetMetadata(study, MetadataType_LastUpdate, now); | |
757 db_.SetMetadata(patient, MetadataType_LastUpdate, now); | |
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758 |
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759 // Attach the auto-computed metadata for the instance level, |
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760 // reflecting these additions into the input metadata map |
1247 | 761 db_.SetMetadata(instance, MetadataType_Instance_ReceptionDate, now); |
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762 instanceMetadata[MetadataType_Instance_ReceptionDate] = now; |
202 | 763 |
1247 | 764 db_.SetMetadata(instance, MetadataType_Instance_RemoteAet, remoteAet); |
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765 instanceMetadata[MetadataType_Instance_RemoteAet] = remoteAet; |
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766 |
202 | 767 const DicomValue* value; |
768 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_INSTANCE_NUMBER)) != NULL || | |
769 (value = dicomSummary.TestAndGetValue(DICOM_TAG_IMAGE_INDEX)) != NULL) | |
0 | 770 { |
1247 | 771 db_.SetMetadata(instance, MetadataType_Instance_IndexInSeries, value->AsString()); |
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772 instanceMetadata[MetadataType_Instance_IndexInSeries] = value->AsString(); |
0 | 773 } |
774 | |
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775 // Check whether the series of this new instance is now completed |
202 | 776 if (isNewSeries) |
777 { | |
1247 | 778 ComputeExpectedNumberOfInstances(db_, series, dicomSummary); |
202 | 779 } |
780 | |
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781 SeriesStatus seriesStatus = GetSeriesStatus(series); |
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782 if (seriesStatus == SeriesStatus_Complete) |
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783 { |
1237 | 784 LogChange(series, ChangeType_CompletedSeries, ResourceType_Series, hasher.HashSeries()); |
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785 } |
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786 |
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787 // Mark the parent resources of this instance as unstable |
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788 MarkAsUnstable(series, ResourceType_Series, hasher.HashSeries()); |
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789 MarkAsUnstable(study, ResourceType_Study, hasher.HashStudy()); |
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changeset
|
790 MarkAsUnstable(patient, ResourceType_Patient, hasher.HashPatient()); |
511
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791 |
278
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792 t.Commit(instanceSize); |
268
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793 |
0 | 794 return StoreStatus_Success; |
795 } | |
62 | 796 catch (OrthancException& e) |
0 | 797 { |
1247 | 798 LOG(ERROR) << "EXCEPTION [" << e.What() << "]"; |
0 | 799 } |
800 | |
801 return StoreStatus_Failure; | |
802 } | |
803 | |
804 | |
238 | 805 void ServerIndex::ComputeStatistics(Json::Value& target) |
0 | 806 { |
206
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807 boost::mutex::scoped_lock lock(mutex_); |
238 | 808 target = Json::objectValue; |
0 | 809 |
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810 uint64_t cs = currentStorageSize_; |
1247 | 811 assert(cs == db_.GetTotalCompressedSize()); |
812 uint64_t us = db_.GetTotalUncompressedSize(); | |
440
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813 target["TotalDiskSize"] = boost::lexical_cast<std::string>(cs); |
238 | 814 target["TotalUncompressedSize"] = boost::lexical_cast<std::string>(us); |
1310
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diff
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|
815 target["TotalDiskSizeMB"] = static_cast<unsigned int>(cs / MEGA_BYTES); |
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|
816 target["TotalUncompressedSizeMB"] = static_cast<unsigned int>(us / MEGA_BYTES); |
238 | 817 |
1247 | 818 target["CountPatients"] = static_cast<unsigned int>(db_.GetResourceCount(ResourceType_Patient)); |
819 target["CountStudies"] = static_cast<unsigned int>(db_.GetResourceCount(ResourceType_Study)); | |
820 target["CountSeries"] = static_cast<unsigned int>(db_.GetResourceCount(ResourceType_Series)); | |
821 target["CountInstances"] = static_cast<unsigned int>(db_.GetResourceCount(ResourceType_Instance)); | |
238 | 822 } |
823 | |
187
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824 |
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825 |
585 | 826 SeriesStatus ServerIndex::GetSeriesStatus(int64_t id) |
199 | 827 { |
828 // Get the expected number of instances in this series (from the metadata) | |
1238 | 829 int64_t expected; |
830 if (!GetMetadataAsInteger(expected, id, MetadataType_Series_ExpectedNumberOfInstances)) | |
199 | 831 { |
832 return SeriesStatus_Unknown; | |
833 } | |
834 | |
835 // Loop over the instances of this series | |
836 std::list<int64_t> children; | |
1247 | 837 db_.GetChildrenInternalId(children, id); |
199 | 838 |
1238 | 839 std::set<int64_t> instances; |
199 | 840 for (std::list<int64_t>::const_iterator |
656 | 841 it = children.begin(); it != children.end(); ++it) |
199 | 842 { |
843 // Get the index of this instance in the series | |
1238 | 844 int64_t index; |
845 if (!GetMetadataAsInteger(index, *it, MetadataType_Instance_IndexInSeries)) | |
199 | 846 { |
847 return SeriesStatus_Unknown; | |
848 } | |
849 | |
656 | 850 if (!(index > 0 && index <= expected)) |
199 | 851 { |
852 // Out-of-range instance index | |
853 return SeriesStatus_Inconsistent; | |
854 } | |
855 | |
856 if (instances.find(index) != instances.end()) | |
857 { | |
858 // Twice the same instance index | |
859 return SeriesStatus_Inconsistent; | |
860 } | |
861 | |
862 instances.insert(index); | |
863 } | |
864 | |
1238 | 865 if (static_cast<int64_t>(instances.size()) == expected) |
199 | 866 { |
867 return SeriesStatus_Complete; | |
868 } | |
869 else | |
870 { | |
871 return SeriesStatus_Missing; | |
872 } | |
873 } | |
874 | |
875 | |
876 | |
202 | 877 void ServerIndex::MainDicomTagsToJson(Json::Value& target, |
878 int64_t resourceId) | |
198
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879 { |
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880 DicomMap tags; |
1247 | 881 db_.GetMainDicomTags(tags, resourceId); |
198
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882 target["MainDicomTags"] = Json::objectValue; |
1368 | 883 FromDcmtkBridge::ToJson(target["MainDicomTags"], tags, true); |
198
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884 } |
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885 |
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|
886 bool ServerIndex::LookupResource(Json::Value& result, |
199 | 887 const std::string& publicId, |
888 ResourceType expectedType) | |
198
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889 { |
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890 result = Json::objectValue; |
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891 |
206
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892 boost::mutex::scoped_lock lock(mutex_); |
199 | 893 |
198
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894 // Lookup for the requested resource |
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895 int64_t id; |
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896 ResourceType type; |
1294 | 897 if (!db_.LookupResource(id, type, publicId) || |
199 | 898 type != expectedType) |
198
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899 { |
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900 return false; |
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901 } |
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902 |
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903 // Find the parent resource (if it exists) |
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904 if (type != ResourceType_Patient) |
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905 { |
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|
906 int64_t parentId; |
1247 | 907 if (!db_.LookupParent(parentId, id)) |
198
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|
908 { |
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|
909 throw OrthancException(ErrorCode_InternalError); |
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|
910 } |
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|
911 |
1247 | 912 std::string parent = db_.GetPublicId(parentId); |
198
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|
913 |
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|
914 switch (type) |
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|
915 { |
269
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diff
changeset
|
916 case ResourceType_Study: |
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|
917 result["ParentPatient"] = parent; |
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diff
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|
918 break; |
198
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|
919 |
269
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|
920 case ResourceType_Series: |
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diff
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|
921 result["ParentStudy"] = parent; |
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diff
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|
922 break; |
198
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|
923 |
269
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changeset
|
924 case ResourceType_Instance: |
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|
925 result["ParentSeries"] = parent; |
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diff
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|
926 break; |
198
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|
927 |
269
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diff
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|
928 default: |
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|
929 throw OrthancException(ErrorCode_InternalError); |
198
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|
930 } |
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|
931 } |
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|
932 |
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|
933 // List the children resources |
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|
934 std::list<std::string> children; |
1247 | 935 db_.GetChildrenPublicId(children, id); |
198
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|
936 |
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|
937 if (type != ResourceType_Instance) |
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|
938 { |
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|
939 Json::Value c = Json::arrayValue; |
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|
940 |
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|
941 for (std::list<std::string>::const_iterator |
656 | 942 it = children.begin(); it != children.end(); ++it) |
198
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|
943 { |
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|
944 c.append(*it); |
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945 } |
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|
946 |
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|
947 switch (type) |
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|
948 { |
269
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diff
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|
949 case ResourceType_Patient: |
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|
950 result["Studies"] = c; |
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|
951 break; |
198
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|
952 |
269
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|
953 case ResourceType_Study: |
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|
954 result["Series"] = c; |
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|
955 break; |
198
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|
956 |
269
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|
957 case ResourceType_Series: |
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|
958 result["Instances"] = c; |
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|
959 break; |
198
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|
960 |
269
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|
961 default: |
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|
962 throw OrthancException(ErrorCode_InternalError); |
198
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|
963 } |
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964 } |
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965 |
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|
966 // Set the resource type |
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967 switch (type) |
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|
968 { |
269
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969 case ResourceType_Patient: |
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970 result["Type"] = "Patient"; |
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|
971 break; |
198
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|
972 |
269
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changeset
|
973 case ResourceType_Study: |
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|
974 result["Type"] = "Study"; |
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|
975 break; |
199 | 976 |
269
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|
977 case ResourceType_Series: |
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978 { |
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|
979 result["Type"] = "Series"; |
434
ccf3a0a43dac
EnumerationDictionary
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|
980 result["Status"] = EnumerationToString(GetSeriesStatus(id)); |
198
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981 |
1238 | 982 int64_t i; |
1237 | 983 if (GetMetadataAsInteger(i, id, MetadataType_Series_ExpectedNumberOfInstances)) |
1238 | 984 result["ExpectedNumberOfInstances"] = static_cast<int>(i); |
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985 else |
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986 result["ExpectedNumberOfInstances"] = Json::nullValue; |
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987 |
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988 break; |
200
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989 } |
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990 |
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991 case ResourceType_Instance: |
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992 { |
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993 result["Type"] = "Instance"; |
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994 |
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995 FileInfo attachment; |
1247 | 996 if (!db_.LookupAttachment(attachment, id, FileContentType_Dicom)) |
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997 { |
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998 throw OrthancException(ErrorCode_InternalError); |
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999 } |
200
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1000 |
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1001 result["FileSize"] = static_cast<unsigned int>(attachment.GetUncompressedSize()); |
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1002 result["FileUuid"] = attachment.GetUuid(); |
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1003 |
1238 | 1004 int64_t i; |
1237 | 1005 if (GetMetadataAsInteger(i, id, MetadataType_Instance_IndexInSeries)) |
1238 | 1006 result["IndexInSeries"] = static_cast<int>(i); |
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1007 else |
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1008 result["IndexInSeries"] = Json::nullValue; |
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1009 |
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1010 break; |
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1011 } |
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1012 |
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1013 default: |
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1014 throw OrthancException(ErrorCode_InternalError); |
198
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1015 } |
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1016 |
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1017 // Record the remaining information |
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1018 result["ID"] = publicId; |
202 | 1019 MainDicomTagsToJson(result, id); |
198
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1020 |
315 | 1021 std::string tmp; |
1022 | |
1247 | 1023 if (db_.LookupMetadata(tmp, id, MetadataType_AnonymizedFrom)) |
1236 | 1024 { |
315 | 1025 result["AnonymizedFrom"] = tmp; |
1236 | 1026 } |
315 | 1027 |
1247 | 1028 if (db_.LookupMetadata(tmp, id, MetadataType_ModifiedFrom)) |
1236 | 1029 { |
315 | 1030 result["ModifiedFrom"] = tmp; |
1236 | 1031 } |
315 | 1032 |
511
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1033 if (type == ResourceType_Patient || |
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1034 type == ResourceType_Study || |
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1035 type == ResourceType_Series) |
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1036 { |
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1037 result["IsStable"] = !unstableResources_.Contains(id); |
1148
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diff
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|
1038 |
1247 | 1039 if (db_.LookupMetadata(tmp, id, MetadataType_LastUpdate)) |
1236 | 1040 { |
1148
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|
1041 result["LastUpdate"] = tmp; |
1236 | 1042 } |
511
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1043 } |
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1044 |
198
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1045 return true; |
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1046 } |
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1047 |
0 | 1048 |
232
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1049 bool ServerIndex::LookupAttachment(FileInfo& attachment, |
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1050 const std::string& instanceUuid, |
233 | 1051 FileContentType contentType) |
0 | 1052 { |
206
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1053 boost::mutex::scoped_lock lock(mutex_); |
0 | 1054 |
193
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1055 int64_t id; |
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1056 ResourceType type; |
1294 | 1057 if (!db_.LookupResource(id, type, instanceUuid)) |
192
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1058 { |
1113
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1059 throw OrthancException(ErrorCode_UnknownResource); |
192
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1060 } |
193
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1061 |
1247 | 1062 if (db_.LookupAttachment(attachment, id, contentType)) |
232
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1063 { |
233 | 1064 assert(attachment.GetContentType() == contentType); |
232
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1065 return true; |
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1066 } |
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1067 else |
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1068 { |
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1069 return false; |
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1070 } |
192
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1071 } |
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1072 |
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1073 |
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1074 |
1354 | 1075 void ServerIndex::GetAllUuids(std::list<std::string>& target, |
190 | 1076 ResourceType resourceType) |
0 | 1077 { |
1357 | 1078 boost::mutex::scoped_lock lock(mutex_); |
1079 db_.GetAllPublicIds(target, resourceType); | |
0 | 1080 } |
1081 | |
1082 | |
1244 | 1083 template <typename T> |
1084 static void FormatLog(Json::Value& target, | |
1085 const std::list<T>& log, | |
1086 const std::string& name, | |
1087 bool done, | |
1088 int64_t since) | |
1240 | 1089 { |
1090 Json::Value items = Json::arrayValue; | |
1244 | 1091 for (typename std::list<T>::const_iterator |
1304 | 1092 it = log.begin(); it != log.end(); ++it) |
1240 | 1093 { |
1094 Json::Value item; | |
1095 it->Format(item); | |
1096 items.append(item); | |
1097 } | |
1098 | |
1099 target = Json::objectValue; | |
1244 | 1100 target[name] = items; |
1240 | 1101 target["Done"] = done; |
1102 | |
1305 | 1103 int64_t last = (log.empty() ? since : log.back().GetSeq()); |
1240 | 1104 target["Last"] = static_cast<int>(last); |
1105 } | |
1106 | |
1107 | |
1247 | 1108 void ServerIndex::GetChanges(Json::Value& target, |
204 | 1109 int64_t since, |
0 | 1110 unsigned int maxResults) |
1111 { | |
1240 | 1112 std::list<ServerIndexChange> changes; |
1113 bool done; | |
1114 | |
1115 { | |
1116 boost::mutex::scoped_lock lock(mutex_); | |
1247 | 1117 db_.GetChanges(changes, done, since, maxResults); |
1240 | 1118 } |
1119 | |
1244 | 1120 FormatLog(target, changes, "Changes", done, since); |
237
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1121 } |
0 | 1122 |
1240 | 1123 |
1247 | 1124 void ServerIndex::GetLastChange(Json::Value& target) |
237
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1125 { |
1240 | 1126 std::list<ServerIndexChange> changes; |
1127 | |
1128 { | |
1129 boost::mutex::scoped_lock lock(mutex_); | |
1247 | 1130 db_.GetLastChange(changes); |
1240 | 1131 } |
1132 | |
1244 | 1133 FormatLog(target, changes, "Changes", true, 0); |
0 | 1134 } |
231 | 1135 |
1240 | 1136 |
231 | 1137 void ServerIndex::LogExportedResource(const std::string& publicId, |
1138 const std::string& remoteModality) | |
1139 { | |
1140 boost::mutex::scoped_lock lock(mutex_); | |
1310
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1141 Transaction transaction(*this); |
231 | 1142 |
1143 int64_t id; | |
1144 ResourceType type; | |
1294 | 1145 if (!db_.LookupResource(id, type, publicId)) |
231 | 1146 { |
1147 throw OrthancException(ErrorCode_InternalError); | |
1148 } | |
1149 | |
1150 std::string patientId; | |
1151 std::string studyInstanceUid; | |
1152 std::string seriesInstanceUid; | |
1153 std::string sopInstanceUid; | |
1154 | |
1155 int64_t currentId = id; | |
1156 ResourceType currentType = type; | |
1157 | |
1158 // Iteratively go up inside the patient/study/series/instance hierarchy | |
1159 bool done = false; | |
1160 while (!done) | |
1161 { | |
1162 DicomMap map; | |
1247 | 1163 db_.GetMainDicomTags(map, currentId); |
231 | 1164 |
1165 switch (currentType) | |
1166 { | |
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1167 case ResourceType_Patient: |
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1168 patientId = map.GetValue(DICOM_TAG_PATIENT_ID).AsString(); |
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1169 done = true; |
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1170 break; |
231 | 1171 |
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1172 case ResourceType_Study: |
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1173 studyInstanceUid = map.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).AsString(); |
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1174 currentType = ResourceType_Patient; |
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1175 break; |
231 | 1176 |
269
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1177 case ResourceType_Series: |
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1178 seriesInstanceUid = map.GetValue(DICOM_TAG_SERIES_INSTANCE_UID).AsString(); |
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1179 currentType = ResourceType_Study; |
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1180 break; |
231 | 1181 |
269
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1182 case ResourceType_Instance: |
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1183 sopInstanceUid = map.GetValue(DICOM_TAG_SOP_INSTANCE_UID).AsString(); |
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1184 currentType = ResourceType_Series; |
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1185 break; |
231 | 1186 |
269
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1187 default: |
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1188 throw OrthancException(ErrorCode_InternalError); |
231 | 1189 } |
1190 | |
1191 // If we have not reached the Patient level, find the parent of | |
1192 // the current resource | |
1193 if (!done) | |
1194 { | |
1247 | 1195 bool ok = db_.LookupParent(currentId, currentId); |
375
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1196 assert(ok); |
231 | 1197 } |
1198 } | |
1199 | |
1246 | 1200 ExportedResource resource(-1, |
1201 type, | |
1202 publicId, | |
1203 remoteModality, | |
1204 Toolbox::GetNowIsoString(), | |
1205 patientId, | |
1206 studyInstanceUid, | |
1207 seriesInstanceUid, | |
1208 sopInstanceUid); | |
1310
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1209 |
1247 | 1210 db_.LogExportedResource(resource); |
1310
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1211 transaction.Commit(0); |
231 | 1212 } |
1213 | |
1214 | |
1247 | 1215 void ServerIndex::GetExportedResources(Json::Value& target, |
231 | 1216 int64_t since, |
1217 unsigned int maxResults) | |
1218 { | |
1244 | 1219 std::list<ExportedResource> exported; |
1220 bool done; | |
1221 | |
1222 { | |
1223 boost::mutex::scoped_lock lock(mutex_); | |
1247 | 1224 db_.GetExportedResources(exported, done, since, maxResults); |
1244 | 1225 } |
1226 | |
1227 FormatLog(target, exported, "Exports", done, since); | |
231 | 1228 } |
237
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1229 |
1244 | 1230 |
1247 | 1231 void ServerIndex::GetLastExportedResource(Json::Value& target) |
237
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1232 { |
1244 | 1233 std::list<ExportedResource> exported; |
1234 | |
1235 { | |
1236 boost::mutex::scoped_lock lock(mutex_); | |
1247 | 1237 db_.GetLastExportedResource(exported); |
1244 | 1238 } |
1239 | |
1240 FormatLog(target, exported, "Exports", true, 0); | |
237
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1241 } |
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1242 |
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1243 |
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1244 bool ServerIndex::IsRecyclingNeeded(uint64_t instanceSize) |
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1245 { |
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1246 if (maximumStorageSize_ != 0) |
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1247 { |
278
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1248 uint64_t currentSize = currentStorageSize_ - listener_->GetSizeOfFilesToRemove(); |
1247 | 1249 assert(db_.GetTotalCompressedSize() == currentSize); |
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1250 |
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1251 if (currentSize + instanceSize > maximumStorageSize_) |
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1252 { |
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1253 return true; |
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1254 } |
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1255 } |
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1256 |
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1257 if (maximumPatients_ != 0) |
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1258 { |
1247 | 1259 uint64_t patientCount = db_.GetResourceCount(ResourceType_Patient); |
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1260 if (patientCount > maximumPatients_) |
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1261 { |
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1262 return true; |
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1263 } |
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1264 } |
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1265 |
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1266 return false; |
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1267 } |
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1268 |
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1269 |
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1270 void ServerIndex::Recycle(uint64_t instanceSize, |
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1271 const std::string& newPatientId) |
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1272 { |
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1273 if (!IsRecyclingNeeded(instanceSize)) |
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1274 { |
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1275 return; |
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1276 } |
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1277 |
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1278 // Check whether other DICOM instances from this patient are |
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1279 // already stored |
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1280 int64_t patientToAvoid; |
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1281 ResourceType type; |
1294 | 1282 bool hasPatientToAvoid = db_.LookupResource(patientToAvoid, type, newPatientId); |
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1283 |
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1284 if (hasPatientToAvoid && type != ResourceType_Patient) |
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1285 { |
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1286 throw OrthancException(ErrorCode_InternalError); |
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1287 } |
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1288 |
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1289 // Iteratively select patient to remove until there is enough |
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1290 // space in the DICOM store |
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1291 int64_t patientToRecycle; |
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1292 while (true) |
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1293 { |
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1294 // If other instances of this patient are already in the store, |
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1295 // we must avoid to recycle them |
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1296 bool ok = hasPatientToAvoid ? |
1247 | 1297 db_.SelectPatientToRecycle(patientToRecycle, patientToAvoid) : |
1298 db_.SelectPatientToRecycle(patientToRecycle); | |
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1299 |
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1300 if (!ok) |
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1301 { |
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1302 throw OrthancException(ErrorCode_FullStorage); |
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1303 } |
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1304 |
1331
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Prevent freeze on C-FIND if no DICOM tag is to be returned
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1305 VLOG(1) << "Recycling one patient"; |
1247 | 1306 db_.DeleteResource(patientToRecycle); |
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1307 |
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1308 if (!IsRecyclingNeeded(instanceSize)) |
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1309 { |
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1310 // OK, we're done |
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1311 break; |
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1312 } |
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1313 } |
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1314 } |
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1315 |
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1316 void ServerIndex::SetMaximumPatientCount(unsigned int count) |
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1317 { |
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1318 boost::mutex::scoped_lock lock(mutex_); |
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1319 maximumPatients_ = count; |
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1320 |
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1321 if (count == 0) |
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1322 { |
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1323 LOG(WARNING) << "No limit on the number of stored patients"; |
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1324 } |
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1325 else |
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1326 { |
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1327 LOG(WARNING) << "At most " << count << " patients will be stored"; |
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1328 } |
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1329 |
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1330 StandaloneRecycling(); |
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1331 } |
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1332 |
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1333 void ServerIndex::SetMaximumStorageSize(uint64_t size) |
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1334 { |
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1335 boost::mutex::scoped_lock lock(mutex_); |
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1336 maximumStorageSize_ = size; |
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1337 |
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1338 if (size == 0) |
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1339 { |
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1340 LOG(WARNING) << "No limit on the size of the storage area"; |
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1341 } |
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1342 else |
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1343 { |
440
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1344 LOG(WARNING) << "At most " << (size / MEGA_BYTES) << "MB will be used for the storage area"; |
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1345 } |
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1346 |
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1347 StandaloneRecycling(); |
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1348 } |
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1349 |
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1350 void ServerIndex::StandaloneRecycling() |
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1351 { |
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1352 // WARNING: No mutex here, do not include this as a public method |
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1353 Transaction t(*this); |
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1354 Recycle(0, ""); |
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1355 t.Commit(0); |
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1356 } |
272
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1357 |
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1358 |
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1359 bool ServerIndex::IsProtectedPatient(const std::string& publicId) |
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1360 { |
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1361 boost::mutex::scoped_lock lock(mutex_); |
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1362 |
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1363 // Lookup for the requested resource |
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1364 int64_t id; |
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1365 ResourceType type; |
1294 | 1366 if (!db_.LookupResource(id, type, publicId) || |
272
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1367 type != ResourceType_Patient) |
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1368 { |
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1369 throw OrthancException(ErrorCode_ParameterOutOfRange); |
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1370 } |
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1371 |
1247 | 1372 return db_.IsProtectedPatient(id); |
272
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1373 } |
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1374 |
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1375 |
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1376 void ServerIndex::SetProtectedPatient(const std::string& publicId, |
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1377 bool isProtected) |
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1378 { |
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1379 boost::mutex::scoped_lock lock(mutex_); |
1310
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1380 Transaction transaction(*this); |
272
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1381 |
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1382 // Lookup for the requested resource |
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1383 int64_t id; |
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1384 ResourceType type; |
1294 | 1385 if (!db_.LookupResource(id, type, publicId) || |
272
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1386 type != ResourceType_Patient) |
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1387 { |
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1388 throw OrthancException(ErrorCode_ParameterOutOfRange); |
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1389 } |
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1390 |
1247 | 1391 db_.SetProtectedPatient(id, isProtected); |
1310
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1392 transaction.Commit(0); |
272
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1393 |
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1394 if (isProtected) |
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1395 LOG(INFO) << "Patient " << publicId << " has been protected"; |
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1396 else |
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1397 LOG(INFO) << "Patient " << publicId << " has been unprotected"; |
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1398 } |
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1399 |
304 | 1400 |
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1401 void ServerIndex::GetChildren(std::list<std::string>& result, |
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1402 const std::string& publicId) |
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1403 { |
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1404 result.clear(); |
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1405 |
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1406 boost::mutex::scoped_lock lock(mutex_); |
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1407 |
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1408 ResourceType type; |
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1409 int64_t resource; |
1294 | 1410 if (!db_.LookupResource(resource, type, publicId)) |
714
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1411 { |
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1412 throw OrthancException(ErrorCode_UnknownResource); |
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1413 } |
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1414 |
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1415 if (type == ResourceType_Instance) |
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1416 { |
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1417 // An instance cannot have a child |
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1418 throw OrthancException(ErrorCode_BadParameterType); |
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1419 } |
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1420 |
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1421 std::list<int64_t> tmp; |
1247 | 1422 db_.GetChildrenInternalId(tmp, resource); |
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1423 |
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1424 for (std::list<int64_t>::const_iterator |
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1425 it = tmp.begin(); it != tmp.end(); ++it) |
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1426 { |
1247 | 1427 result.push_back(db_.GetPublicId(*it)); |
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1428 } |
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1429 } |
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1430 |
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1431 |
304 | 1432 void ServerIndex::GetChildInstances(std::list<std::string>& result, |
1433 const std::string& publicId) | |
1434 { | |
1435 result.clear(); | |
1436 | |
1437 boost::mutex::scoped_lock lock(mutex_); | |
1438 | |
1439 ResourceType type; | |
1440 int64_t top; | |
1294 | 1441 if (!db_.LookupResource(top, type, publicId)) |
304 | 1442 { |
1443 throw OrthancException(ErrorCode_UnknownResource); | |
1444 } | |
1445 | |
1446 if (type == ResourceType_Instance) | |
1447 { | |
1448 // The resource is already an instance: Do not go down the hierarchy | |
1449 result.push_back(publicId); | |
1450 return; | |
1451 } | |
1452 | |
1453 std::stack<int64_t> toExplore; | |
1454 toExplore.push(top); | |
1455 | |
1456 std::list<int64_t> tmp; | |
1457 | |
1458 while (!toExplore.empty()) | |
1459 { | |
1460 // Get the internal ID of the current resource | |
1461 int64_t resource = toExplore.top(); | |
1462 toExplore.pop(); | |
1463 | |
1247 | 1464 if (db_.GetResourceType(resource) == ResourceType_Instance) |
304 | 1465 { |
1247 | 1466 result.push_back(db_.GetPublicId(resource)); |
304 | 1467 } |
1468 else | |
1469 { | |
1470 // Tag all the children of this resource as to be explored | |
1247 | 1471 db_.GetChildrenInternalId(tmp, resource); |
304 | 1472 for (std::list<int64_t>::const_iterator |
656 | 1473 it = tmp.begin(); it != tmp.end(); ++it) |
304 | 1474 { |
1475 toExplore.push(*it); | |
1476 } | |
1477 } | |
1478 } | |
1479 } | |
1480 | |
306
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1481 |
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1482 void ServerIndex::SetMetadata(const std::string& publicId, |
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1483 MetadataType type, |
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1484 const std::string& value) |
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1485 { |
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1486 boost::mutex::scoped_lock lock(mutex_); |
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1487 |
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1488 ResourceType rtype; |
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1489 int64_t id; |
1294 | 1490 if (!db_.LookupResource(id, rtype, publicId)) |
306
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1491 { |
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1492 throw OrthancException(ErrorCode_UnknownResource); |
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1493 } |
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1494 |
1247 | 1495 db_.SetMetadata(id, type, value); |
306
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1496 } |
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1497 |
438 | 1498 |
1499 void ServerIndex::DeleteMetadata(const std::string& publicId, | |
1500 MetadataType type) | |
1501 { | |
1502 boost::mutex::scoped_lock lock(mutex_); | |
1503 | |
1504 ResourceType rtype; | |
1505 int64_t id; | |
1294 | 1506 if (!db_.LookupResource(id, rtype, publicId)) |
438 | 1507 { |
1508 throw OrthancException(ErrorCode_UnknownResource); | |
1509 } | |
1510 | |
1247 | 1511 db_.DeleteMetadata(id, type); |
438 | 1512 } |
1513 | |
1514 | |
306
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1515 bool ServerIndex::LookupMetadata(std::string& target, |
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1516 const std::string& publicId, |
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1517 MetadataType type) |
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1518 { |
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1519 boost::mutex::scoped_lock lock(mutex_); |
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1520 |
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1521 ResourceType rtype; |
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1522 int64_t id; |
1294 | 1523 if (!db_.LookupResource(id, rtype, publicId)) |
306
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1524 { |
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1525 throw OrthancException(ErrorCode_UnknownResource); |
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1526 } |
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1527 |
1247 | 1528 return db_.LookupMetadata(target, id, type); |
306
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1529 } |
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1530 |
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1531 |
739 | 1532 void ServerIndex::ListAvailableMetadata(std::list<MetadataType>& target, |
436
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1533 const std::string& publicId) |
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1534 { |
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1535 boost::mutex::scoped_lock lock(mutex_); |
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1536 |
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1537 ResourceType rtype; |
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1538 int64_t id; |
1294 | 1539 if (!db_.LookupResource(id, rtype, publicId)) |
436
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1540 { |
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1541 throw OrthancException(ErrorCode_UnknownResource); |
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1542 } |
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1543 |
1247 | 1544 db_.ListAvailableMetadata(target, id); |
436
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1545 } |
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1546 |
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1547 |
697
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1548 void ServerIndex::ListAvailableAttachments(std::list<FileContentType>& target, |
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1549 const std::string& publicId, |
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1550 ResourceType expectedType) |
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1551 { |
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1552 boost::mutex::scoped_lock lock(mutex_); |
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diff
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|
1553 |
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diff
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|
1554 ResourceType type; |
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diff
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|
1555 int64_t id; |
1294 | 1556 if (!db_.LookupResource(id, type, publicId) || |
697
dd1ce9a2844c
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diff
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|
1557 expectedType != type) |
dd1ce9a2844c
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diff
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|
1558 { |
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diff
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|
1559 throw OrthancException(ErrorCode_UnknownResource); |
dd1ce9a2844c
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diff
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|
1560 } |
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diff
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|
1561 |
1247 | 1562 db_.ListAvailableAttachments(target, id); |
697
dd1ce9a2844c
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diff
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|
1563 } |
dd1ce9a2844c
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diff
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|
1564 |
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diff
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|
1565 |
306
326d5a4a5af3
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|
1566 bool ServerIndex::LookupParent(std::string& target, |
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|
1567 const std::string& publicId) |
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|
1568 { |
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diff
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|
1569 boost::mutex::scoped_lock lock(mutex_); |
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diff
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|
1570 |
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|
1571 ResourceType type; |
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|
1572 int64_t id; |
1294 | 1573 if (!db_.LookupResource(id, type, publicId)) |
306
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|
1574 { |
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|
1575 throw OrthancException(ErrorCode_UnknownResource); |
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|
1576 } |
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|
1577 |
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|
1578 int64_t parentId; |
1247 | 1579 if (db_.LookupParent(parentId, id)) |
306
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|
1580 { |
1247 | 1581 target = db_.GetPublicId(parentId); |
306
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|
1582 return true; |
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|
1583 } |
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|
1584 else |
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|
1585 { |
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|
1586 return false; |
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|
1587 } |
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|
1588 } |
310 | 1589 |
1590 | |
1591 uint64_t ServerIndex::IncrementGlobalSequence(GlobalProperty sequence) | |
1592 { | |
1593 boost::mutex::scoped_lock lock(mutex_); | |
1310
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1594 Transaction transaction(*this); |
311 | 1595 |
1237 | 1596 uint64_t seq = IncrementGlobalSequenceInternal(sequence); |
1310
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|
1597 transaction.Commit(0); |
311 | 1598 |
1599 return seq; | |
310 | 1600 } |
315 | 1601 |
1602 | |
1603 | |
1604 void ServerIndex::LogChange(ChangeType changeType, | |
1605 const std::string& publicId) | |
1606 { | |
1607 boost::mutex::scoped_lock lock(mutex_); | |
1310
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|
1608 Transaction transaction(*this); |
315 | 1609 |
1610 int64_t id; | |
1611 ResourceType type; | |
1294 | 1612 if (!db_.LookupResource(id, type, publicId)) |
315 | 1613 { |
1614 throw OrthancException(ErrorCode_UnknownResource); | |
1615 } | |
1616 | |
1237 | 1617 LogChange(id, changeType, type, publicId); |
1310
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|
1618 transaction.Commit(0); |
315 | 1619 } |
413
47d63c941902
clearing /exports and /changes
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parents:
399
diff
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|
1620 |
47d63c941902
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399
diff
changeset
|
1621 |
47d63c941902
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1622 void ServerIndex::DeleteChanges() |
47d63c941902
clearing /exports and /changes
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diff
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|
1623 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1624 boost::mutex::scoped_lock lock(mutex_); |
1286 | 1625 db_.ClearChanges(); |
413
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diff
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|
1626 } |
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diff
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|
1627 |
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diff
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|
1628 void ServerIndex::DeleteExportedResources() |
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diff
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|
1629 { |
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diff
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|
1630 boost::mutex::scoped_lock lock(mutex_); |
1286 | 1631 db_.ClearExportedResources(); |
413
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diff
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|
1632 } |
440
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|
1633 |
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|
1634 |
646 | 1635 void ServerIndex::GetStatisticsInternal(/* out */ uint64_t& compressedSize, |
1636 /* out */ uint64_t& uncompressedSize, | |
1637 /* out */ unsigned int& countStudies, | |
1638 /* out */ unsigned int& countSeries, | |
1639 /* out */ unsigned int& countInstances, | |
1640 /* in */ int64_t id, | |
1641 /* in */ ResourceType type) | |
440
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diff
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|
1642 { |
646 | 1643 std::stack<int64_t> toExplore; |
1644 toExplore.push(id); | |
440
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diff
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|
1645 |
646 | 1646 countInstances = 0; |
1647 countSeries = 0; | |
1648 countStudies = 0; | |
1649 compressedSize = 0; | |
1650 uncompressedSize = 0; | |
440
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diff
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|
1651 |
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diff
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|
1652 while (!toExplore.empty()) |
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diff
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|
1653 { |
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diff
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|
1654 // Get the internal ID of the current resource |
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|
1655 int64_t resource = toExplore.top(); |
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|
1656 toExplore.pop(); |
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diff
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|
1657 |
1247 | 1658 ResourceType thisType = db_.GetResourceType(resource); |
440
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|
1659 |
702
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delete custom attachment
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diff
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|
1660 std::list<FileContentType> f; |
1247 | 1661 db_.ListAvailableAttachments(f, resource); |
702
7592a48e97e4
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diff
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|
1662 |
7592a48e97e4
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diff
changeset
|
1663 for (std::list<FileContentType>::const_iterator |
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diff
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|
1664 it = f.begin(); it != f.end(); ++it) |
7592a48e97e4
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701
diff
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|
1665 { |
7592a48e97e4
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diff
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|
1666 FileInfo attachment; |
1247 | 1667 if (db_.LookupAttachment(attachment, resource, *it)) |
702
7592a48e97e4
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diff
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|
1668 { |
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diff
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|
1669 compressedSize += attachment.GetCompressedSize(); |
7592a48e97e4
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diff
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|
1670 uncompressedSize += attachment.GetUncompressedSize(); |
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diff
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|
1671 } |
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diff
changeset
|
1672 } |
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diff
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|
1673 |
440
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diff
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|
1674 if (thisType == ResourceType_Instance) |
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diff
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|
1675 { |
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diff
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|
1676 countInstances++; |
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diff
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|
1677 } |
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diff
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|
1678 else |
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diff
changeset
|
1679 { |
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diff
changeset
|
1680 switch (thisType) |
23e5b35e3c5c
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diff
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|
1681 { |
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diff
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|
1682 case ResourceType_Study: |
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1683 countStudies++; |
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1684 break; |
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|
1685 |
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diff
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|
1686 case ResourceType_Series: |
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1687 countSeries++; |
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diff
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|
1688 break; |
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diff
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|
1689 |
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diff
changeset
|
1690 default: |
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diff
changeset
|
1691 break; |
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|
1692 } |
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|
1693 |
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1694 // Tag all the children of this resource as to be explored |
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|
1695 std::list<int64_t> tmp; |
1247 | 1696 db_.GetChildrenInternalId(tmp, resource); |
440
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|
1697 for (std::list<int64_t>::const_iterator |
656 | 1698 it = tmp.begin(); it != tmp.end(); ++it) |
440
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changeset
|
1699 { |
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changeset
|
1700 toExplore.push(*it); |
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1701 } |
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1702 } |
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1703 } |
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|
1704 |
646 | 1705 if (countStudies == 0) |
1706 { | |
1707 countStudies = 1; | |
1708 } | |
1709 | |
1710 if (countSeries == 0) | |
1711 { | |
1712 countSeries = 1; | |
1713 } | |
1714 } | |
1715 | |
1716 | |
1717 | |
1718 void ServerIndex::GetStatistics(Json::Value& target, | |
1719 const std::string& publicId) | |
1720 { | |
1721 boost::mutex::scoped_lock lock(mutex_); | |
1722 | |
1723 ResourceType type; | |
1724 int64_t top; | |
1294 | 1725 if (!db_.LookupResource(top, type, publicId)) |
646 | 1726 { |
1727 throw OrthancException(ErrorCode_UnknownResource); | |
1728 } | |
1729 | |
1730 uint64_t uncompressedSize; | |
1731 uint64_t compressedSize; | |
1732 unsigned int countStudies; | |
1733 unsigned int countSeries; | |
1734 unsigned int countInstances; | |
1735 GetStatisticsInternal(compressedSize, uncompressedSize, countStudies, | |
1736 countSeries, countInstances, top, type); | |
1737 | |
440
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changeset
|
1738 target = Json::objectValue; |
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|
1739 target["DiskSize"] = boost::lexical_cast<std::string>(compressedSize); |
1310
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1740 target["DiskSizeMB"] = static_cast<unsigned int>(compressedSize / MEGA_BYTES); |
440
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1741 target["UncompressedSize"] = boost::lexical_cast<std::string>(uncompressedSize); |
1310
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1742 target["UncompressedSizeMB"] = static_cast<unsigned int>(uncompressedSize / MEGA_BYTES); |
440
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1743 |
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1744 switch (type) |
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1745 { |
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1746 // Do NOT add "break" below this point! |
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1747 case ResourceType_Patient: |
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1748 target["CountStudies"] = countStudies; |
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1749 |
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1750 case ResourceType_Study: |
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1751 target["CountSeries"] = countSeries; |
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1752 |
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1753 case ResourceType_Series: |
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1754 target["CountInstances"] = countInstances; |
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1755 |
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1756 case ResourceType_Instance: |
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1757 default: |
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1758 break; |
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1759 } |
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1760 } |
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1761 |
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1762 |
646 | 1763 void ServerIndex::GetStatistics(/* out */ uint64_t& compressedSize, |
1764 /* out */ uint64_t& uncompressedSize, | |
1765 /* out */ unsigned int& countStudies, | |
1766 /* out */ unsigned int& countSeries, | |
1767 /* out */ unsigned int& countInstances, | |
1768 const std::string& publicId) | |
1769 { | |
1770 boost::mutex::scoped_lock lock(mutex_); | |
1771 | |
1772 ResourceType type; | |
1773 int64_t top; | |
1294 | 1774 if (!db_.LookupResource(top, type, publicId)) |
646 | 1775 { |
1776 throw OrthancException(ErrorCode_UnknownResource); | |
1777 } | |
1778 | |
1779 GetStatisticsInternal(compressedSize, uncompressedSize, countStudies, | |
1780 countSeries, countInstances, top, type); | |
1781 } | |
1782 | |
1783 | |
511
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1784 void ServerIndex::UnstableResourcesMonitorThread(ServerIndex* that) |
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1785 { |
810
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1786 int stableAge = Configuration::GetGlobalIntegerParameter("StableAge", 60); |
511
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1787 if (stableAge <= 0) |
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1788 { |
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1789 stableAge = 60; |
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1790 } |
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1791 |
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1792 LOG(INFO) << "Starting the monitor for stable resources (stable age = " << stableAge << ")"; |
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1793 |
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1794 while (!that->done_) |
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1795 { |
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1796 // Check for stable resources each second |
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1797 boost::this_thread::sleep(boost::posix_time::seconds(1)); |
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1798 |
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1799 boost::mutex::scoped_lock lock(that->mutex_); |
513 | 1800 |
511
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1801 while (!that->unstableResources_.IsEmpty() && |
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1802 that->unstableResources_.GetOldestPayload().GetAge() > static_cast<unsigned int>(stableAge)) |
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1803 { |
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1804 // This DICOM resource has not received any new instance for |
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1805 // some time. It can be considered as stable. |
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1806 |
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1807 UnstableResourcePayload payload; |
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1808 int64_t id = that->unstableResources_.RemoveOldest(payload); |
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1809 |
513 | 1810 // Ensure that the resource is still existing before logging the change |
1247 | 1811 if (that->db_.IsExistingResource(id)) |
511
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1812 { |
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1813 switch (payload.GetResourceType()) |
513 | 1814 { |
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1815 case ResourceType_Patient: |
1237 | 1816 that->LogChange(id, ChangeType_StablePatient, ResourceType_Patient, payload.GetPublicId()); |
513 | 1817 break; |
511
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1818 |
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1819 case ResourceType_Study: |
1237 | 1820 that->LogChange(id, ChangeType_StableStudy, ResourceType_Study, payload.GetPublicId()); |
513 | 1821 break; |
511
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1822 |
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1823 case ResourceType_Series: |
1237 | 1824 that->LogChange(id, ChangeType_StableSeries, ResourceType_Series, payload.GetPublicId()); |
513 | 1825 break; |
1826 | |
1827 default: | |
1828 throw OrthancException(ErrorCode_InternalError); | |
1829 } | |
1830 | |
1831 //LOG(INFO) << "Stable resource: " << EnumerationToString(payload.type_) << " " << id; | |
511
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1832 } |
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1833 } |
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1834 } |
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1835 |
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1836 LOG(INFO) << "Closing the monitor thread for stable resources"; |
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1837 } |
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1838 |
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1839 |
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1840 void ServerIndex::MarkAsUnstable(int64_t id, |
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1841 Orthanc::ResourceType type, |
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1842 const std::string& publicId) |
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1843 { |
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1844 // WARNING: Before calling this method, "mutex_" must be locked. |
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1845 |
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1846 assert(type == Orthanc::ResourceType_Patient || |
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1847 type == Orthanc::ResourceType_Study || |
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1848 type == Orthanc::ResourceType_Series); |
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1849 |
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1850 UnstableResourcePayload payload(type, publicId); |
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1851 unstableResources_.AddOrMakeMostRecent(id, payload); |
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1852 //LOG(INFO) << "Unstable resource: " << EnumerationToString(type) << " " << id; |
1189
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1853 |
1237 | 1854 LogChange(id, ChangeType_NewChildInstance, type, publicId); |
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1855 } |
521 | 1856 |
1857 | |
1858 | |
1162 | 1859 void ServerIndex::LookupIdentifier(std::list<std::string>& result, |
1860 const DicomTag& tag, | |
1861 const std::string& value, | |
1862 ResourceType type) | |
615 | 1863 { |
1864 result.clear(); | |
1865 | |
1866 boost::mutex::scoped_lock lock(mutex_); | |
1867 | |
1868 std::list<int64_t> id; | |
1247 | 1869 db_.LookupIdentifier(id, tag, value); |
615 | 1870 |
1871 for (std::list<int64_t>::const_iterator | |
656 | 1872 it = id.begin(); it != id.end(); ++it) |
615 | 1873 { |
1247 | 1874 if (db_.GetResourceType(*it) == type) |
615 | 1875 { |
1247 | 1876 result.push_back(db_.GetPublicId(*it)); |
615 | 1877 } |
1878 } | |
1879 } | |
1880 | |
1881 | |
1162 | 1882 void ServerIndex::LookupIdentifier(std::list<std::string>& result, |
1883 const DicomTag& tag, | |
1884 const std::string& value) | |
521 | 1885 { |
1886 result.clear(); | |
1887 | |
1888 boost::mutex::scoped_lock lock(mutex_); | |
1889 | |
1890 std::list<int64_t> id; | |
1247 | 1891 db_.LookupIdentifier(id, tag, value); |
521 | 1892 |
1893 for (std::list<int64_t>::const_iterator | |
656 | 1894 it = id.begin(); it != id.end(); ++it) |
521 | 1895 { |
1247 | 1896 result.push_back(db_.GetPublicId(*it)); |
521 | 1897 } |
1898 } | |
1899 | |
1900 | |
1162 | 1901 void ServerIndex::LookupIdentifier(std::list< std::pair<ResourceType, std::string> >& result, |
1902 const std::string& value) | |
521 | 1903 { |
1904 result.clear(); | |
1905 | |
1906 boost::mutex::scoped_lock lock(mutex_); | |
1907 | |
1908 std::list<int64_t> id; | |
1247 | 1909 db_.LookupIdentifier(id, value); |
521 | 1910 |
1911 for (std::list<int64_t>::const_iterator | |
656 | 1912 it = id.begin(); it != id.end(); ++it) |
521 | 1913 { |
1247 | 1914 result.push_back(std::make_pair(db_.GetResourceType(*it), |
1915 db_.GetPublicId(*it))); | |
521 | 1916 } |
1917 } | |
699
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1918 |
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1919 |
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1920 StoreStatus ServerIndex::AddAttachment(const FileInfo& attachment, |
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1921 const std::string& publicId) |
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1922 { |
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1923 boost::mutex::scoped_lock lock(mutex_); |
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1924 |
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1925 Transaction t(*this); |
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1926 |
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1927 ResourceType resourceType; |
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1928 int64_t resourceId; |
1294 | 1929 if (!db_.LookupResource(resourceId, resourceType, publicId)) |
699
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1930 { |
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1931 return StoreStatus_Failure; // Inexistent resource |
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1932 } |
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1933 |
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1934 // Remove possible previous attachment |
1247 | 1935 db_.DeleteAttachment(resourceId, attachment.GetContentType()); |
699
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1936 |
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1937 // Locate the patient of the target resource |
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1938 int64_t patientId = resourceId; |
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1939 for (;;) |
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1940 { |
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1941 int64_t parent; |
1247 | 1942 if (db_.LookupParent(parent, patientId)) |
704
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1943 { |
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1944 // We have not reached the patient level yet |
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1945 patientId = parent; |
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1946 } |
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1947 else |
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1948 { |
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1949 // We have reached the patient level |
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1950 break; |
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1951 } |
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1952 } |
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1953 |
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1954 // Possibly apply the recycling mechanism while preserving this patient |
1247 | 1955 assert(db_.GetResourceType(patientId) == ResourceType_Patient); |
1956 Recycle(attachment.GetCompressedSize(), db_.GetPublicId(patientId)); | |
704
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1957 |
1247 | 1958 db_.AddAttachment(resourceId, attachment); |
699
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1959 |
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1960 t.Commit(attachment.GetCompressedSize()); |
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1961 |
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1962 return StoreStatus_Success; |
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1963 } |
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1964 |
702
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1965 |
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1966 void ServerIndex::DeleteAttachment(const std::string& publicId, |
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1967 FileContentType type) |
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1968 { |
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1969 boost::mutex::scoped_lock lock(mutex_); |
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1970 Transaction t(*this); |
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1971 |
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1972 ResourceType rtype; |
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1973 int64_t id; |
1294 | 1974 if (!db_.LookupResource(id, rtype, publicId)) |
702
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1975 { |
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1976 throw OrthancException(ErrorCode_UnknownResource); |
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1977 } |
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1978 |
1247 | 1979 db_.DeleteAttachment(id, type); |
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1980 |
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1981 t.Commit(0); |
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1982 } |
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1983 |
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1984 |
1002
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1985 bool ServerIndex::GetMetadata(Json::Value& target, |
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1986 const std::string& publicId) |
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1987 { |
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1988 boost::mutex::scoped_lock lock(mutex_); |
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1989 |
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1990 target = Json::objectValue; |
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1991 |
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1992 ResourceType type; |
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1993 int64_t id; |
1294 | 1994 if (!db_.LookupResource(id, type, publicId)) |
1002
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1995 { |
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1996 return false; |
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1997 } |
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1998 |
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1999 std::list<MetadataType> metadata; |
1247 | 2000 db_.ListAvailableMetadata(metadata, id); |
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2001 |
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2002 for (std::list<MetadataType>::const_iterator |
1304 | 2003 it = metadata.begin(); it != metadata.end(); ++it) |
1002
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2004 { |
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2005 std::string key = EnumerationToString(*it); |
1238 | 2006 |
2007 std::string value; | |
1247 | 2008 if (!db_.LookupMetadata(value, id, *it)) |
1238 | 2009 { |
2010 value.clear(); | |
2011 } | |
2012 | |
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2013 target[key] = value; |
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2014 } |
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2015 |
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2016 return true; |
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2017 } |
1218
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2018 |
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2019 |
1249
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|
2020 void ServerIndex::SetGlobalProperty(GlobalProperty property, |
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2021 const std::string& value) |
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2022 { |
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2023 boost::mutex::scoped_lock lock(mutex_); |
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|
2024 db_.SetGlobalProperty(property, value); |
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|
2025 } |
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|
2026 |
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|
2027 |
1218
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2028 std::string ServerIndex::GetGlobalProperty(GlobalProperty property, |
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|
2029 const std::string& defaultValue) |
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|
2030 { |
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|
2031 boost::mutex::scoped_lock lock(mutex_); |
1239 | 2032 |
2033 std::string value; | |
1247 | 2034 if (db_.LookupGlobalProperty(value, property)) |
1239 | 2035 { |
2036 return value; | |
2037 } | |
2038 else | |
2039 { | |
2040 return defaultValue; | |
2041 } | |
1218
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2042 } |
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|
2043 |
1352 | 2044 |
2045 bool ServerIndex::GetMainDicomTags(DicomMap& result, | |
2046 const std::string& publicId, | |
2047 ResourceType expectedType) | |
2048 { | |
2049 result.Clear(); | |
2050 | |
2051 boost::mutex::scoped_lock lock(mutex_); | |
2052 | |
2053 // Lookup for the requested resource | |
2054 int64_t id; | |
2055 ResourceType type; | |
2056 if (!db_.LookupResource(id, type, publicId) || | |
2057 type != expectedType) | |
2058 { | |
2059 return false; | |
2060 } | |
2061 else | |
2062 { | |
2063 db_.GetMainDicomTags(result, id); | |
2064 return true; | |
2065 } | |
2066 } | |
0 | 2067 } |