Mercurial > hg > orthanc
annotate OrthancServer/ServerJobs/ResourceModificationJob.cpp @ 3793:b452caa573d6
news
author | Sebastien Jodogne <s.jodogne@gmail.com> |
---|---|
date | Thu, 26 Mar 2020 07:25:42 +0100 |
parents | 2a170a8f1faf |
children | 023b2a9f3aa1 |
rev | line source |
---|---|
2642 | 1 /** |
2 * Orthanc - A Lightweight, RESTful DICOM Store | |
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics | |
4 * Department, University Hospital of Liege, Belgium | |
3640
94f4a18a79cc
upgrade to year 2020
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3430
diff
changeset
|
5 * Copyright (C) 2017-2020 Osimis S.A., Belgium |
2642 | 6 * |
7 * This program is free software: you can redistribute it and/or | |
8 * modify it under the terms of the GNU General Public License as | |
9 * published by the Free Software Foundation, either version 3 of the | |
10 * License, or (at your option) any later version. | |
11 * | |
12 * In addition, as a special exception, the copyright holders of this | |
13 * program give permission to link the code of its release with the | |
14 * OpenSSL project's "OpenSSL" library (or with modified versions of it | |
15 * that use the same license as the "OpenSSL" library), and distribute | |
16 * the linked executables. You must obey the GNU General Public License | |
17 * in all respects for all of the code used other than "OpenSSL". If you | |
18 * modify file(s) with this exception, you may extend this exception to | |
19 * your version of the file(s), but you are not obligated to do so. If | |
20 * you do not wish to do so, delete this exception statement from your | |
21 * version. If you delete this exception statement from all source files | |
22 * in the program, then also delete it here. | |
23 * | |
24 * This program is distributed in the hope that it will be useful, but | |
25 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
27 * General Public License for more details. | |
28 * | |
29 * You should have received a copy of the GNU General Public License | |
30 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
31 **/ | |
32 | |
33 | |
34 #include "../PrecompiledHeadersServer.h" | |
35 #include "ResourceModificationJob.h" | |
36 | |
37 #include "../../Core/Logging.h" | |
2664
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
38 #include "../../Core/SerializationToolbox.h" |
3095
beeeb6096f27
removing dependencies upon ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3060
diff
changeset
|
39 #include "../ServerContext.h" |
2642 | 40 |
41 namespace Orthanc | |
42 { | |
2868
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
43 class ResourceModificationJob::Output : public boost::noncopyable |
2642 | 44 { |
2868
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
45 private: |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
46 ResourceType level_; |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
47 bool isFirst_; |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
48 std::string id_; |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
49 std::string patientId_; |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
50 |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
51 public: |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
52 Output(ResourceType level) : |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
53 level_(level), |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
54 isFirst_(true) |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
55 { |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
56 if (level_ != ResourceType_Patient && |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
57 level_ != ResourceType_Study && |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
58 level_ != ResourceType_Series) |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
59 { |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
60 throw OrthancException(ErrorCode_ParameterOutOfRange); |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
61 } |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
62 } |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
63 |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
64 ResourceType GetLevel() const |
2642 | 65 { |
2868
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
66 return level_; |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
67 } |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
68 |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
69 |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
70 void Update(DicomInstanceHasher& hasher) |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
71 { |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
72 if (isFirst_) |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
73 { |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
74 switch (level_) |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
75 { |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
76 case ResourceType_Series: |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
77 id_ = hasher.HashSeries(); |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
78 break; |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
79 |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
80 case ResourceType_Study: |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
81 id_ = hasher.HashStudy(); |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
82 break; |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
83 |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
84 case ResourceType_Patient: |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
85 id_ = hasher.HashPatient(); |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
86 break; |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
87 |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
88 default: |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
89 throw OrthancException(ErrorCode_InternalError); |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
90 } |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
91 |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
92 patientId_ = hasher.HashPatient(); |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
93 isFirst_ = false; |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
94 } |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
95 } |
2642 | 96 |
97 | |
2868
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
98 bool Format(Json::Value& target) |
2642 | 99 { |
2868
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
100 if (isFirst_) |
2642 | 101 { |
2868
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
102 return false; |
2642 | 103 } |
2868
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
104 else |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
105 { |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
106 target = Json::objectValue; |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
107 target["Type"] = EnumerationToString(level_); |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
108 target["ID"] = id_; |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
109 target["Path"] = GetBasePath(level_, id_); |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
110 target["PatientID"] = patientId_; |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
111 return true; |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
112 } |
2642 | 113 } |
114 | |
115 | |
2868
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
116 bool GetIdentifier(std::string& id) |
2642 | 117 { |
2868
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
118 if (isFirst_) |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
119 { |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
120 return false; |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
121 } |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
122 else |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
123 { |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
124 id = id_; |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
125 return true; |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
126 } |
2642 | 127 } |
2868
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
128 }; |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
129 |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
130 |
2642 | 131 |
132 | |
133 bool ResourceModificationJob::HandleInstance(const std::string& instance) | |
134 { | |
2868
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
135 if (modification_.get() == NULL || |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
136 output_.get() == NULL) |
2642 | 137 { |
2955 | 138 throw OrthancException(ErrorCode_BadSequenceOfCalls, |
139 "No modification was provided for this job"); | |
2642 | 140 } |
141 | |
142 | |
143 LOG(INFO) << "Modifying instance in a job: " << instance; | |
144 | |
2825
8aa6aef11b70
New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2664
diff
changeset
|
145 |
8aa6aef11b70
New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2664
diff
changeset
|
146 /** |
8aa6aef11b70
New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2664
diff
changeset
|
147 * Retrieve the original instance from the DICOM cache. |
8aa6aef11b70
New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2664
diff
changeset
|
148 **/ |
8aa6aef11b70
New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2664
diff
changeset
|
149 |
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
150 std::unique_ptr<DicomInstanceHasher> originalHasher; |
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
151 std::unique_ptr<ParsedDicomFile> modified; |
2642 | 152 |
153 try | |
154 { | |
2825
8aa6aef11b70
New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2664
diff
changeset
|
155 ServerContext::DicomCacheLocker locker(context_, instance); |
8aa6aef11b70
New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2664
diff
changeset
|
156 ParsedDicomFile& original = locker.GetDicom(); |
8aa6aef11b70
New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2664
diff
changeset
|
157 |
8aa6aef11b70
New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2664
diff
changeset
|
158 originalHasher.reset(new DicomInstanceHasher(original.GetHasher())); |
8aa6aef11b70
New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2664
diff
changeset
|
159 modified.reset(original.Clone(true)); |
2642 | 160 } |
3430 | 161 catch (OrthancException& e) |
2642 | 162 { |
3430 | 163 LOG(WARNING) << "An error occurred while executing a Modification job on instance " << instance << ": " << e.GetDetails(); |
2642 | 164 return false; |
165 } | |
166 | |
167 | |
168 /** | |
169 * Compute the resulting DICOM instance. | |
170 **/ | |
171 | |
172 modification_->Apply(*modified); | |
173 | |
174 DicomInstanceToStore toStore; | |
175 toStore.SetOrigin(origin_); | |
176 toStore.SetParsedDicomFile(*modified); | |
177 | |
178 | |
179 /** | |
180 * Prepare the metadata information to associate with the | |
181 * resulting DICOM instance (AnonymizedFrom/ModifiedFrom). | |
182 **/ | |
183 | |
184 DicomInstanceHasher modifiedHasher = modified->GetHasher(); | |
185 | |
186 MetadataType metadataType = (isAnonymization_ ? | |
187 MetadataType_AnonymizedFrom : | |
188 MetadataType_ModifiedFrom); | |
189 | |
2825
8aa6aef11b70
New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2664
diff
changeset
|
190 if (originalHasher->HashSeries() != modifiedHasher.HashSeries()) |
2642 | 191 { |
2825
8aa6aef11b70
New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2664
diff
changeset
|
192 toStore.AddMetadata(ResourceType_Series, metadataType, originalHasher->HashSeries()); |
2642 | 193 } |
194 | |
2825
8aa6aef11b70
New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2664
diff
changeset
|
195 if (originalHasher->HashStudy() != modifiedHasher.HashStudy()) |
2642 | 196 { |
2825
8aa6aef11b70
New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2664
diff
changeset
|
197 toStore.AddMetadata(ResourceType_Study, metadataType, originalHasher->HashStudy()); |
2642 | 198 } |
199 | |
2825
8aa6aef11b70
New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2664
diff
changeset
|
200 if (originalHasher->HashPatient() != modifiedHasher.HashPatient()) |
2642 | 201 { |
2825
8aa6aef11b70
New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2664
diff
changeset
|
202 toStore.AddMetadata(ResourceType_Patient, metadataType, originalHasher->HashPatient()); |
2642 | 203 } |
204 | |
2825
8aa6aef11b70
New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2664
diff
changeset
|
205 assert(instance == originalHasher->HashInstance()); |
2642 | 206 toStore.AddMetadata(ResourceType_Instance, metadataType, instance); |
207 | |
208 | |
209 /** | |
210 * Store the resulting DICOM instance into the Orthanc store. | |
211 **/ | |
212 | |
213 std::string modifiedInstance; | |
214 if (context_.Store(modifiedInstance, toStore) != StoreStatus_Success) | |
215 { | |
2955 | 216 throw OrthancException(ErrorCode_CannotStoreInstance, |
217 "Error while storing a modified instance " + instance); | |
2642 | 218 } |
219 | |
220 assert(modifiedInstance == modifiedHasher.HashInstance()); | |
221 | |
2868
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
222 output_->Update(modifiedHasher); |
2642 | 223 |
224 return true; | |
225 } | |
226 | |
227 | |
2842
ff0ed5ea9e4e
trailing step in SetOfInstancesJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2825
diff
changeset
|
228 bool ResourceModificationJob::HandleTrailingStep() |
ff0ed5ea9e4e
trailing step in SetOfInstancesJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2825
diff
changeset
|
229 { |
ff0ed5ea9e4e
trailing step in SetOfInstancesJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2825
diff
changeset
|
230 throw OrthancException(ErrorCode_InternalError); |
ff0ed5ea9e4e
trailing step in SetOfInstancesJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2825
diff
changeset
|
231 } |
ff0ed5ea9e4e
trailing step in SetOfInstancesJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2825
diff
changeset
|
232 |
ff0ed5ea9e4e
trailing step in SetOfInstancesJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2825
diff
changeset
|
233 |
2642 | 234 void ResourceModificationJob::SetModification(DicomModification* modification, |
2868
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
235 ResourceType level, |
2642 | 236 bool isAnonymization) |
237 { | |
238 if (modification == NULL) | |
239 { | |
240 throw OrthancException(ErrorCode_NullPointer); | |
241 } | |
242 else if (IsStarted()) | |
243 { | |
244 throw OrthancException(ErrorCode_BadSequenceOfCalls); | |
245 } | |
246 else | |
247 { | |
248 modification_.reset(modification); | |
2868
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
249 output_.reset(new Output(level)); |
2642 | 250 isAnonymization_ = isAnonymization; |
251 } | |
252 } | |
253 | |
254 | |
255 void ResourceModificationJob::SetOrigin(const DicomInstanceOrigin& origin) | |
256 { | |
257 if (IsStarted()) | |
258 { | |
259 throw OrthancException(ErrorCode_BadSequenceOfCalls); | |
260 } | |
261 else | |
262 { | |
263 origin_ = origin; | |
264 } | |
265 } | |
266 | |
267 | |
268 void ResourceModificationJob::SetOrigin(const RestApiCall& call) | |
269 { | |
2664
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
270 SetOrigin(DicomInstanceOrigin::FromRest(call)); |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
271 } |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
272 |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
273 |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
274 const DicomModification& ResourceModificationJob::GetModification() const |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
275 { |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
276 if (modification_.get() == NULL) |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
277 { |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
278 throw OrthancException(ErrorCode_BadSequenceOfCalls); |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
279 } |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
280 else |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
281 { |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
282 return *modification_; |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
283 } |
2642 | 284 } |
285 | |
286 | |
287 void ResourceModificationJob::GetPublicContent(Json::Value& value) | |
288 { | |
289 SetOfInstancesJob::GetPublicContent(value); | |
290 | |
291 value["IsAnonymization"] = isAnonymization_; | |
2868
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
292 |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
293 if (output_.get() != NULL) |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
294 { |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
295 output_->Format(value); |
abce036683cd
sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2842
diff
changeset
|
296 } |
2642 | 297 } |
298 | |
2664
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
299 |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
300 static const char* MODIFICATION = "Modification"; |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
301 static const char* ORIGIN = "Origin"; |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
302 static const char* IS_ANONYMIZATION = "IsAnonymization"; |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
303 |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
304 |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
305 ResourceModificationJob::ResourceModificationJob(ServerContext& context, |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
306 const Json::Value& serialized) : |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
307 SetOfInstancesJob(serialized), |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
308 context_(context) |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
309 { |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
310 isAnonymization_ = SerializationToolbox::ReadBoolean(serialized, IS_ANONYMIZATION); |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
311 origin_ = DicomInstanceOrigin(serialized[ORIGIN]); |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
312 modification_.reset(new DicomModification(serialized[MODIFICATION])); |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
313 } |
2642 | 314 |
2663
228e2783ce83
some jobs might not be serializable
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2648
diff
changeset
|
315 bool ResourceModificationJob::Serialize(Json::Value& value) |
2642 | 316 { |
2664
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
317 if (!SetOfInstancesJob::Serialize(value)) |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
318 { |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
319 return false; |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
320 } |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
321 else |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
322 { |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
323 value[IS_ANONYMIZATION] = isAnonymization_; |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
324 origin_.Serialize(value[ORIGIN]); |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
325 |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
326 Json::Value tmp; |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
327 modification_->Serialize(tmp); |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
328 value[MODIFICATION] = tmp; |
2642 | 329 |
2664
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
330 return true; |
a21b244efb37
serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2663
diff
changeset
|
331 } |
2642 | 332 } |
333 } |