Mercurial > hg > orthanc
annotate OrthancServer/OrthancFindRequestHandler.cpp @ 3126:b1787ba94eef
fix issue #32 (HTTP keep-alive), make CivetWeb the default HTTP server
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Wed, 16 Jan 2019 09:52:05 +0100 |
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children | ce272138f15e |
rev | line source |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2019 Osimis S.A., Belgium |
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6 * |
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7 * This program is free software: you can redistribute it and/or |
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8 * modify it under the terms of the GNU General Public License as |
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9 * published by the Free Software Foundation, either version 3 of the |
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10 * License, or (at your option) any later version. |
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11 * |
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12 * In addition, as a special exception, the copyright holders of this |
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13 * program give permission to link the code of its release with the |
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14 * OpenSSL project's "OpenSSL" library (or with modified versions of it |
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15 * that use the same license as the "OpenSSL" library), and distribute |
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16 * the linked executables. You must obey the GNU General Public License |
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17 * in all respects for all of the code used other than "OpenSSL". If you |
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18 * modify file(s) with this exception, you may extend this exception to |
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19 * your version of the file(s), but you are not obligated to do so. If |
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20 * you do not wish to do so, delete this exception statement from your |
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21 * version. If you delete this exception statement from all source files |
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22 * in the program, then also delete it here. |
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23 * |
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24 * This program is distributed in the hope that it will be useful, but |
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25 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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27 * General Public License for more details. |
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28 * |
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29 * You should have received a copy of the GNU General Public License |
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30 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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31 **/ |
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32 |
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33 |
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34 #include "PrecompiledHeadersServer.h" |
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35 #include "OrthancFindRequestHandler.h" |
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36 |
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37 #include "../Core/DicomFormat/DicomArray.h" |
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38 #include "../Core/Lua/LuaFunctionCall.h" |
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39 #include "../Core/Logging.h" |
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40 #include "../Core/DicomParsing/FromDcmtkBridge.h" |
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41 #include "OrthancConfiguration.h" |
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42 #include "Search/LookupResource.h" |
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43 #include "ServerToolbox.h" |
608 | 44 |
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45 #include <boost/regex.hpp> |
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46 |
608 | 47 |
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48 namespace Orthanc |
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49 { |
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50 static void GetChildren(std::list<std::string>& target, |
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51 ServerIndex& index, |
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52 const std::list<std::string>& source) |
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53 { |
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54 target.clear(); |
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55 |
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56 for (std::list<std::string>::const_iterator |
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57 it = source.begin(); it != source.end(); ++it) |
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58 { |
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59 std::list<std::string> tmp; |
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60 index.GetChildren(tmp, *it); |
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61 target.splice(target.end(), tmp); |
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62 } |
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63 } |
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64 |
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65 |
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66 static void StoreSetOfStrings(DicomMap& result, |
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67 const DicomTag& tag, |
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68 const std::set<std::string>& values) |
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69 { |
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70 bool isFirst = true; |
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71 |
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72 std::string s; |
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73 for (std::set<std::string>::const_iterator |
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74 it = values.begin(); it != values.end(); ++it) |
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75 { |
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76 if (isFirst) |
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77 { |
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78 isFirst = false; |
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79 } |
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80 else |
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81 { |
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82 s += "\\"; |
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83 } |
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84 |
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85 s += *it; |
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86 } |
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87 |
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88 result.SetValue(tag, s, false); |
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89 } |
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90 |
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91 |
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92 static void ComputePatientCounters(DicomMap& result, |
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93 ServerIndex& index, |
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94 const std::string& patient, |
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95 const DicomMap& query) |
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96 { |
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97 std::list<std::string> studies; |
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98 index.GetChildren(studies, patient); |
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99 |
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100 if (query.HasTag(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_STUDIES)) |
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101 { |
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102 result.SetValue(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_STUDIES, |
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103 boost::lexical_cast<std::string>(studies.size()), false); |
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104 } |
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105 |
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106 if (!query.HasTag(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_SERIES) && |
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107 !query.HasTag(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_INSTANCES)) |
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108 { |
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109 return; |
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110 } |
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111 |
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112 std::list<std::string> series; |
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113 GetChildren(series, index, studies); |
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114 studies.clear(); // This information is useless below |
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115 |
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116 if (query.HasTag(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_SERIES)) |
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117 { |
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118 result.SetValue(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_SERIES, |
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119 boost::lexical_cast<std::string>(series.size()), false); |
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120 } |
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121 |
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122 if (!query.HasTag(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_INSTANCES)) |
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123 { |
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124 return; |
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125 } |
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126 |
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127 std::list<std::string> instances; |
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128 GetChildren(instances, index, series); |
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129 |
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130 if (query.HasTag(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_INSTANCES)) |
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131 { |
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132 result.SetValue(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_INSTANCES, |
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133 boost::lexical_cast<std::string>(instances.size()), false); |
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134 } |
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135 } |
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136 |
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137 |
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138 static void ComputeStudyCounters(DicomMap& result, |
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139 ServerContext& context, |
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140 const std::string& study, |
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141 const DicomMap& query) |
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142 { |
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143 ServerIndex& index = context.GetIndex(); |
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144 |
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145 std::list<std::string> series; |
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146 index.GetChildren(series, study); |
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147 |
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148 if (query.HasTag(DICOM_TAG_NUMBER_OF_STUDY_RELATED_SERIES)) |
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149 { |
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150 result.SetValue(DICOM_TAG_NUMBER_OF_STUDY_RELATED_SERIES, |
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151 boost::lexical_cast<std::string>(series.size()), false); |
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152 } |
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153 |
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154 if (query.HasTag(DICOM_TAG_MODALITIES_IN_STUDY)) |
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155 { |
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156 std::set<std::string> values; |
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157 |
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158 for (std::list<std::string>::const_iterator |
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159 it = series.begin(); it != series.end(); ++it) |
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160 { |
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161 DicomMap tags; |
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162 if (index.GetMainDicomTags(tags, *it, ResourceType_Series, ResourceType_Series)) |
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163 { |
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164 const DicomValue* value = tags.TestAndGetValue(DICOM_TAG_MODALITY); |
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165 |
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166 if (value != NULL && |
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167 !value->IsNull() && |
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168 !value->IsBinary()) |
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169 { |
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170 values.insert(value->GetContent()); |
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171 } |
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172 } |
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173 } |
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174 |
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175 StoreSetOfStrings(result, DICOM_TAG_MODALITIES_IN_STUDY, values); |
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176 } |
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177 |
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178 if (!query.HasTag(DICOM_TAG_NUMBER_OF_STUDY_RELATED_INSTANCES) && |
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179 !query.HasTag(DICOM_TAG_SOP_CLASSES_IN_STUDY)) |
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180 { |
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181 return; |
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182 } |
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183 |
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184 std::list<std::string> instances; |
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185 GetChildren(instances, index, series); |
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186 |
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187 if (query.HasTag(DICOM_TAG_NUMBER_OF_STUDY_RELATED_INSTANCES)) |
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188 { |
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189 result.SetValue(DICOM_TAG_NUMBER_OF_STUDY_RELATED_INSTANCES, |
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190 boost::lexical_cast<std::string>(instances.size()), false); |
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191 } |
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192 |
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193 if (query.HasTag(DICOM_TAG_SOP_CLASSES_IN_STUDY)) |
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194 { |
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195 std::set<std::string> values; |
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196 |
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197 for (std::list<std::string>::const_iterator |
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198 it = instances.begin(); it != instances.end(); ++it) |
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199 { |
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200 std::string value; |
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201 if (context.LookupOrReconstructMetadata(value, *it, MetadataType_Instance_SopClassUid)) |
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202 { |
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203 values.insert(value); |
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204 } |
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205 } |
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206 |
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207 StoreSetOfStrings(result, DICOM_TAG_SOP_CLASSES_IN_STUDY, values); |
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208 } |
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209 } |
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210 |
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211 |
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212 static void ComputeSeriesCounters(DicomMap& result, |
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213 ServerIndex& index, |
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214 const std::string& series, |
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215 const DicomMap& query) |
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216 { |
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217 std::list<std::string> instances; |
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218 index.GetChildren(instances, series); |
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219 |
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220 if (query.HasTag(DICOM_TAG_NUMBER_OF_SERIES_RELATED_INSTANCES)) |
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221 { |
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222 result.SetValue(DICOM_TAG_NUMBER_OF_SERIES_RELATED_INSTANCES, |
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223 boost::lexical_cast<std::string>(instances.size()), false); |
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224 } |
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225 } |
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226 |
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227 |
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228 static DicomMap* ComputeCounters(ServerContext& context, |
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229 const std::string& instanceId, |
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230 ResourceType level, |
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231 const DicomMap& query) |
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232 { |
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233 switch (level) |
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234 { |
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235 case ResourceType_Patient: |
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236 if (!query.HasTag(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_STUDIES) && |
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237 !query.HasTag(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_SERIES) && |
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238 !query.HasTag(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_INSTANCES)) |
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239 { |
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240 return NULL; |
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241 } |
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242 |
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243 break; |
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244 |
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245 case ResourceType_Study: |
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246 if (!query.HasTag(DICOM_TAG_NUMBER_OF_STUDY_RELATED_SERIES) && |
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247 !query.HasTag(DICOM_TAG_NUMBER_OF_STUDY_RELATED_INSTANCES) && |
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248 !query.HasTag(DICOM_TAG_SOP_CLASSES_IN_STUDY) && |
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249 !query.HasTag(DICOM_TAG_MODALITIES_IN_STUDY)) |
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250 { |
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251 return NULL; |
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252 } |
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253 |
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254 break; |
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255 |
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256 case ResourceType_Series: |
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257 if (!query.HasTag(DICOM_TAG_NUMBER_OF_SERIES_RELATED_INSTANCES)) |
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258 { |
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259 return NULL; |
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260 } |
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261 |
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262 break; |
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263 |
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264 default: |
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265 return NULL; |
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266 } |
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267 |
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268 std::string parent; |
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269 if (!context.GetIndex().LookupParent(parent, instanceId, level)) |
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270 { |
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271 throw OrthancException(ErrorCode_UnknownResource); // The resource was deleted in between |
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272 } |
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273 |
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274 std::auto_ptr<DicomMap> result(new DicomMap); |
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275 |
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276 switch (level) |
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277 { |
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278 case ResourceType_Patient: |
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279 ComputePatientCounters(*result, context.GetIndex(), parent, query); |
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280 break; |
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281 |
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282 case ResourceType_Study: |
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283 ComputeStudyCounters(*result, context, parent, query); |
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284 break; |
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285 |
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286 case ResourceType_Series: |
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287 ComputeSeriesCounters(*result, context.GetIndex(), parent, query); |
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288 break; |
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289 |
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290 default: |
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291 throw OrthancException(ErrorCode_InternalError); |
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292 } |
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293 |
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294 return result.release(); |
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295 } |
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296 |
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297 |
608 | 298 static void AddAnswer(DicomFindAnswers& answers, |
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299 const DicomMap& mainDicomTags, |
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300 const Json::Value* dicomAsJson, |
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301 const DicomArray& query, |
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302 const std::list<DicomTag>& sequencesToReturn, |
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303 const DicomMap* counters) |
608 | 304 { |
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305 DicomMap match; |
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306 |
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307 if (dicomAsJson != NULL) |
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308 { |
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309 match.FromDicomAsJson(*dicomAsJson); |
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310 } |
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311 else |
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312 { |
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313 match.Assign(mainDicomTags); |
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314 } |
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315 |
608 | 316 DicomMap result; |
317 | |
318 for (size_t i = 0; i < query.GetSize(); i++) | |
319 { | |
1346 | 320 if (query.GetElement(i).GetTag() == DICOM_TAG_QUERY_RETRIEVE_LEVEL) |
321 { | |
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322 // Fix issue 30 on Google Code (QR response missing "Query/Retrieve Level" (008,0052)) |
1346 | 323 result.SetValue(query.GetElement(i).GetTag(), query.GetElement(i).GetValue()); |
324 } | |
325 else if (query.GetElement(i).GetTag() == DICOM_TAG_SPECIFIC_CHARACTER_SET) | |
326 { | |
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327 // Do not include the encoding, this is handled by class ParsedDicomFile |
1346 | 328 } |
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329 else |
608 | 330 { |
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331 const DicomTag& tag = query.GetElement(i).GetTag(); |
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332 const DicomValue* value = match.TestAndGetValue(tag); |
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333 |
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334 if (value != NULL && |
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335 !value->IsNull() && |
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336 !value->IsBinary()) |
608 | 337 { |
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338 result.SetValue(tag, value->GetContent(), false); |
608 | 339 } |
722 | 340 else |
341 { | |
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342 result.SetValue(tag, "", false); |
722 | 343 } |
608 | 344 } |
345 } | |
346 | |
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347 if (counters != NULL) |
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Support of optional tags for counting resources in C-Find
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348 { |
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Support of optional tags for counting resources in C-Find
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349 DicomArray tmp(*counters); |
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350 for (size_t i = 0; i < tmp.GetSize(); i++) |
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Support of optional tags for counting resources in C-Find
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351 { |
2007
655489d9165d
DicomMap::ParseDicomMetaInformation()
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352 result.SetValue(tmp.GetElement(i).GetTag(), tmp.GetElement(i).GetValue().GetContent(), false); |
1898
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353 } |
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Support of optional tags for counting resources in C-Find
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354 } |
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355 |
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356 if (result.GetSize() == 0 && |
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|
357 sequencesToReturn.empty()) |
1331
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Prevent freeze on C-FIND if no DICOM tag is to be returned
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358 { |
1361
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refactoring of C-Find SCP
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359 LOG(WARNING) << "The C-FIND request does not return any DICOM tag"; |
1331
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Prevent freeze on C-FIND if no DICOM tag is to be returned
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360 } |
3015
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On C-FIND, avoid accessing the storage area whenever possible
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361 else if (sequencesToReturn.empty()) |
1859
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362 { |
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363 answers.Add(result); |
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364 } |
3015
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On C-FIND, avoid accessing the storage area whenever possible
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365 else if (dicomAsJson == NULL) |
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On C-FIND, avoid accessing the storage area whenever possible
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366 { |
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On C-FIND, avoid accessing the storage area whenever possible
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367 LOG(WARNING) << "C-FIND query requesting a sequence, but reading JSON from disk is disabled"; |
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368 answers.Add(result); |
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369 } |
1331
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Prevent freeze on C-FIND if no DICOM tag is to be returned
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370 else |
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Prevent freeze on C-FIND if no DICOM tag is to be returned
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371 { |
1859
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372 ParsedDicomFile dicom(result); |
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373 |
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374 for (std::list<DicomTag>::const_iterator tag = sequencesToReturn.begin(); |
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375 tag != sequencesToReturn.end(); ++tag) |
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|
376 { |
3012
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
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parents:
3005
diff
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377 assert(dicomAsJson != NULL); |
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Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
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378 const Json::Value& source = (*dicomAsJson) [tag->Format()]; |
1859
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379 |
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380 if (source.type() == Json::objectValue && |
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381 source.isMember("Type") && |
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C-FIND SCP will return tags with sequence value representation
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382 source.isMember("Value") && |
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C-FIND SCP will return tags with sequence value representation
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383 source["Type"].asString() == "Sequence" && |
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C-FIND SCP will return tags with sequence value representation
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|
384 source["Value"].type() == Json::arrayValue) |
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C-FIND SCP will return tags with sequence value representation
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385 { |
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C-FIND SCP will return tags with sequence value representation
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386 Json::Value content = Json::arrayValue; |
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C-FIND SCP will return tags with sequence value representation
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|
387 |
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C-FIND SCP will return tags with sequence value representation
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388 for (Json::Value::ArrayIndex i = 0; i < source["Value"].size(); i++) |
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C-FIND SCP will return tags with sequence value representation
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|
389 { |
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C-FIND SCP will return tags with sequence value representation
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changeset
|
390 Json::Value item; |
2120 | 391 ServerToolbox::SimplifyTags(item, source["Value"][i], DicomToJsonFormat_Short); |
1859
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392 content.append(item); |
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C-FIND SCP will return tags with sequence value representation
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393 } |
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C-FIND SCP will return tags with sequence value representation
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|
394 |
1982
b5d4f9c156ad
Modification of instances can now replace PixelData
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parents:
1900
diff
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|
395 dicom.Replace(*tag, content, false, DicomReplaceMode_InsertIfAbsent); |
1859
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396 } |
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C-FIND SCP will return tags with sequence value representation
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397 } |
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C-FIND SCP will return tags with sequence value representation
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|
398 |
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|
399 answers.Add(dicom); |
1331
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Prevent freeze on C-FIND if no DICOM tag is to be returned
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parents:
1288
diff
changeset
|
400 } |
608 | 401 } |
402 | |
403 | |
1851
d364926389e0
OrthancFindRequestHandler::FilterQueryTag
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diff
changeset
|
404 |
d364926389e0
OrthancFindRequestHandler::FilterQueryTag
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diff
changeset
|
405 bool OrthancFindRequestHandler::FilterQueryTag(std::string& value /* can be modified */, |
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OrthancFindRequestHandler::FilterQueryTag
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diff
changeset
|
406 ResourceType level, |
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OrthancFindRequestHandler::FilterQueryTag
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|
407 const DicomTag& tag, |
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OrthancFindRequestHandler::FilterQueryTag
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diff
changeset
|
408 ModalityManufacturer manufacturer) |
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OrthancFindRequestHandler::FilterQueryTag
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diff
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|
409 { |
2335 | 410 // Whatever the manufacturer, remove the GenericGroupLength tags |
411 // http://dicom.nema.org/medical/dicom/current/output/chtml/part05/sect_7.2.html | |
412 // https://bitbucket.org/sjodogne/orthanc/issues/31/ | |
2434
63194107e61b
fix issue 31 for good: removing group length correctly
amazy
parents:
2382
diff
changeset
|
413 if (tag.GetElement() == 0x0000) |
2317
5b7556568fa4
Incoming C-Find request: removing group-length for all manufacturer -> removed EFilm2 manufacturer that is now useless
amazy
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2256
diff
changeset
|
414 { |
5b7556568fa4
Incoming C-Find request: removing group-length for all manufacturer -> removed EFilm2 manufacturer that is now useless
amazy
parents:
2256
diff
changeset
|
415 return false; |
5b7556568fa4
Incoming C-Find request: removing group-length for all manufacturer -> removed EFilm2 manufacturer that is now useless
amazy
parents:
2256
diff
changeset
|
416 } |
5b7556568fa4
Incoming C-Find request: removing group-length for all manufacturer -> removed EFilm2 manufacturer that is now useless
amazy
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2256
diff
changeset
|
417 |
1853
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two patches for manufacturers Efilm and Vitrea
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changeset
|
418 switch (manufacturer) |
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two patches for manufacturers Efilm and Vitrea
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|
419 { |
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two patches for manufacturers Efilm and Vitrea
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|
420 case ModalityManufacturer_Vitrea: |
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two patches for manufacturers Efilm and Vitrea
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421 // Following Denis Nesterov's mail on 2015-11-30 |
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two patches for manufacturers Efilm and Vitrea
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changeset
|
422 if (tag == DicomTag(0x5653, 0x0010)) // "PrivateCreator = Vital Images SW 3.4" |
b7d3d3b182cf
two patches for manufacturers Efilm and Vitrea
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423 { |
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two patches for manufacturers Efilm and Vitrea
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|
424 return false; |
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two patches for manufacturers Efilm and Vitrea
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changeset
|
425 } |
b7d3d3b182cf
two patches for manufacturers Efilm and Vitrea
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changeset
|
426 |
b7d3d3b182cf
two patches for manufacturers Efilm and Vitrea
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changeset
|
427 break; |
b7d3d3b182cf
two patches for manufacturers Efilm and Vitrea
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changeset
|
428 |
b7d3d3b182cf
two patches for manufacturers Efilm and Vitrea
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|
429 default: |
b7d3d3b182cf
two patches for manufacturers Efilm and Vitrea
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changeset
|
430 break; |
b7d3d3b182cf
two patches for manufacturers Efilm and Vitrea
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changeset
|
431 } |
b7d3d3b182cf
two patches for manufacturers Efilm and Vitrea
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|
432 |
1851
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OrthancFindRequestHandler::FilterQueryTag
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433 return true; |
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OrthancFindRequestHandler::FilterQueryTag
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|
434 } |
d364926389e0
OrthancFindRequestHandler::FilterQueryTag
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diff
changeset
|
435 |
d364926389e0
OrthancFindRequestHandler::FilterQueryTag
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diff
changeset
|
436 |
1888
512b6e76f531
Lua: "IncomingFindRequestFilter()" to apply filters to incoming C-Find requests
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1859
diff
changeset
|
437 bool OrthancFindRequestHandler::ApplyLuaFilter(DicomMap& target, |
512b6e76f531
Lua: "IncomingFindRequestFilter()" to apply filters to incoming C-Find requests
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changeset
|
438 const DicomMap& source, |
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Lua: "IncomingFindRequestFilter()" to apply filters to incoming C-Find requests
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changeset
|
439 const std::string& remoteIp, |
512b6e76f531
Lua: "IncomingFindRequestFilter()" to apply filters to incoming C-Find requests
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diff
changeset
|
440 const std::string& remoteAet, |
2827
d4fd4614f275
IncomingWorklistRequestFilter() to filter incoming C-FIND worklist queries
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parents:
2617
diff
changeset
|
441 const std::string& calledAet, |
d4fd4614f275
IncomingWorklistRequestFilter() to filter incoming C-FIND worklist queries
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diff
changeset
|
442 ModalityManufacturer manufacturer) |
1888
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Lua: "IncomingFindRequestFilter()" to apply filters to incoming C-Find requests
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|
443 { |
2221
e7beca979562
fix Windows build due to overwriting a macro
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2218
diff
changeset
|
444 static const char* LUA_CALLBACK = "IncomingFindRequestFilter"; |
2616
2f3007bf0708
event queues in Lua, serialization of sequence of operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2612
diff
changeset
|
445 |
2617
912a767911b0
back to a single Lua context
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changeset
|
446 LuaScripting::Lock lock(context_.GetLuaScripting()); |
912a767911b0
back to a single Lua context
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diff
changeset
|
447 |
2616
2f3007bf0708
event queues in Lua, serialization of sequence of operations
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changeset
|
448 if (!lock.GetLua().IsExistingFunction(LUA_CALLBACK)) |
2218
3eefb84ac0bd
dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()"
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2208
diff
changeset
|
449 { |
3eefb84ac0bd
dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()"
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diff
changeset
|
450 return false; |
3eefb84ac0bd
dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()"
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diff
changeset
|
451 } |
3eefb84ac0bd
dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()"
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diff
changeset
|
452 else |
3eefb84ac0bd
dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()"
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parents:
2208
diff
changeset
|
453 { |
2827
d4fd4614f275
IncomingWorklistRequestFilter() to filter incoming C-FIND worklist queries
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2617
diff
changeset
|
454 Json::Value origin; |
d4fd4614f275
IncomingWorklistRequestFilter() to filter incoming C-FIND worklist queries
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2617
diff
changeset
|
455 FormatOrigin(origin, remoteIp, remoteAet, calledAet, manufacturer); |
1888
512b6e76f531
Lua: "IncomingFindRequestFilter()" to apply filters to incoming C-Find requests
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diff
changeset
|
456 |
2616
2f3007bf0708
event queues in Lua, serialization of sequence of operations
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diff
changeset
|
457 LuaFunctionCall call(lock.GetLua(), LUA_CALLBACK); |
2218
3eefb84ac0bd
dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()"
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diff
changeset
|
458 call.PushDicom(source); |
1888
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Lua: "IncomingFindRequestFilter()" to apply filters to incoming C-Find requests
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changeset
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459 call.PushJson(origin); |
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460 FromDcmtkBridge::ExecuteToDicom(target, call); |
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461 |
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462 return true; |
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463 } |
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464 } |
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465 |
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466 |
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467 OrthancFindRequestHandler::OrthancFindRequestHandler(ServerContext& context) : |
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468 context_(context), |
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469 maxResults_(0), |
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470 maxInstances_(0) |
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471 { |
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472 } |
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473 |
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474 |
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475 class OrthancFindRequestHandler::LookupVisitor : public ServerContext::ILookupVisitor |
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476 { |
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477 private: |
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478 DicomFindAnswers& answers_; |
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479 ServerContext& context_; |
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480 ResourceType level_; |
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481 const DicomMap& query_; |
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482 DicomArray queryAsArray_; |
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483 const std::list<DicomTag>& sequencesToReturn_; |
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484 |
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485 public: |
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486 LookupVisitor(DicomFindAnswers& answers, |
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487 ServerContext& context, |
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488 ResourceType level, |
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489 const DicomMap& query, |
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490 const std::list<DicomTag>& sequencesToReturn) : |
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491 answers_(answers), |
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492 context_(context), |
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493 level_(level), |
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494 query_(query), |
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495 queryAsArray_(query), |
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496 sequencesToReturn_(sequencesToReturn) |
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497 { |
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498 answers_.SetComplete(false); |
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499 } |
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500 |
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501 virtual bool IsDicomAsJsonNeeded() const |
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502 { |
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503 // Ask the "DICOM-as-JSON" attachment only if sequences are to |
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504 // be returned OR if "query_" contains non-main DICOM tags! |
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505 |
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506 DicomMap withoutSpecialTags; |
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507 withoutSpecialTags.Assign(query_); |
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508 |
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509 // Check out "ComputeCounters()" |
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510 withoutSpecialTags.Remove(DICOM_TAG_MODALITIES_IN_STUDY); |
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511 withoutSpecialTags.Remove(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_INSTANCES); |
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512 withoutSpecialTags.Remove(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_SERIES); |
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513 withoutSpecialTags.Remove(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_STUDIES); |
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514 withoutSpecialTags.Remove(DICOM_TAG_NUMBER_OF_SERIES_RELATED_INSTANCES); |
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515 withoutSpecialTags.Remove(DICOM_TAG_NUMBER_OF_STUDY_RELATED_INSTANCES); |
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516 withoutSpecialTags.Remove(DICOM_TAG_NUMBER_OF_STUDY_RELATED_SERIES); |
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517 withoutSpecialTags.Remove(DICOM_TAG_SOP_CLASSES_IN_STUDY); |
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518 |
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519 // Check out "AddAnswer()" |
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520 withoutSpecialTags.Remove(DICOM_TAG_SPECIFIC_CHARACTER_SET); |
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521 withoutSpecialTags.Remove(DICOM_TAG_QUERY_RETRIEVE_LEVEL); |
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522 |
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523 return (!sequencesToReturn_.empty() || |
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524 !withoutSpecialTags.HasOnlyMainDicomTags()); |
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525 } |
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526 |
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527 virtual void MarkAsComplete() |
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528 { |
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529 answers_.SetComplete(true); |
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530 } |
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531 |
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532 virtual void Visit(const std::string& publicId, |
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533 const std::string& instanceId, |
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534 const DicomMap& mainDicomTags, |
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535 const Json::Value* dicomAsJson) |
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536 { |
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537 std::auto_ptr<DicomMap> counters(ComputeCounters(context_, instanceId, level_, query_)); |
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538 |
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539 AddAnswer(answers_, mainDicomTags, dicomAsJson, |
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540 queryAsArray_, sequencesToReturn_, counters.get()); |
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541 } |
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542 }; |
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543 |
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544 |
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545 void OrthancFindRequestHandler::Handle(DicomFindAnswers& answers, |
665 | 546 const DicomMap& input, |
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547 const std::list<DicomTag>& sequencesToReturn, |
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548 const std::string& remoteIp, |
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549 const std::string& remoteAet, |
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550 const std::string& calledAet, |
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551 ModalityManufacturer manufacturer) |
565
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552 { |
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553 /** |
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554 * Possibly apply the user-supplied Lua filter. |
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555 **/ |
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556 |
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557 DicomMap lua; |
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558 const DicomMap* filteredInput = &input; |
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559 |
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560 if (ApplyLuaFilter(lua, input, remoteIp, remoteAet, calledAet, manufacturer)) |
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561 { |
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562 filteredInput = &lua; |
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563 } |
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564 |
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565 |
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|
566 /** |
565
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567 * Retrieve the query level. |
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568 **/ |
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569 |
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570 assert(filteredInput != NULL); |
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571 const DicomValue* levelTmp = filteredInput->TestAndGetValue(DICOM_TAG_QUERY_RETRIEVE_LEVEL); |
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572 if (levelTmp == NULL || |
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573 levelTmp->IsNull() || |
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574 levelTmp->IsBinary()) |
565
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575 { |
2955 | 576 throw OrthancException(ErrorCode_BadRequest, |
577 "C-FIND request without the tag 0008,0052 (QueryRetrieveLevel)"); | |
565
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578 } |
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579 |
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580 ResourceType level = StringToResourceType(levelTmp->GetContent().c_str()); |
565
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581 |
714
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582 if (level != ResourceType_Patient && |
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583 level != ResourceType_Study && |
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584 level != ResourceType_Series && |
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585 level != ResourceType_Instance) |
565
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586 { |
714
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587 throw OrthancException(ErrorCode_NotImplemented); |
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588 } |
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589 |
665 | 590 |
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591 DicomArray query(*filteredInput); |
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592 LOG(INFO) << "DICOM C-Find request at level: " << EnumerationToString(level); |
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593 |
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594 for (size_t i = 0; i < query.GetSize(); i++) |
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595 { |
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596 if (!query.GetElement(i).GetValue().IsNull()) |
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597 { |
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598 LOG(INFO) << " " << query.GetElement(i).GetTag() |
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599 << " " << FromDcmtkBridge::GetTagName(query.GetElement(i)) |
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600 << " = " << query.GetElement(i).GetValue().GetContent(); |
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601 } |
565
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602 } |
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603 |
1859
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604 for (std::list<DicomTag>::const_iterator it = sequencesToReturn.begin(); |
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605 it != sequencesToReturn.end(); ++it) |
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606 { |
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607 LOG(INFO) << " (" << it->Format() |
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608 << ") " << FromDcmtkBridge::GetTagName(*it, "") |
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609 << " : sequence tag whose content will be copied"; |
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610 } |
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611 |
565
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612 |
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613 /** |
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614 * Build up the query object. |
608 | 615 **/ |
616 | |
2876 | 617 LookupResource lookup(level); |
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618 |
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619 bool caseSensitivePN; |
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620 |
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621 { |
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622 OrthancConfiguration::ReaderLock lock; |
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623 caseSensitivePN = lock.GetConfiguration().GetBooleanParameter("CaseSensitivePN", false); |
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624 } |
2256
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625 |
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626 for (size_t i = 0; i < query.GetSize(); i++) |
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627 { |
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628 const DicomElement& element = query.GetElement(i); |
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629 const DicomTag tag = element.GetTag(); |
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630 |
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631 if (element.GetValue().IsNull() || |
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632 tag == DICOM_TAG_QUERY_RETRIEVE_LEVEL || |
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633 tag == DICOM_TAG_SPECIFIC_CHARACTER_SET) |
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634 { |
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635 continue; |
714
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636 } |
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|
637 |
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638 std::string value = element.GetValue().GetContent(); |
1429
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639 if (value.size() == 0) |
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640 { |
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641 // An empty string corresponds to a "*" wildcard constraint, so we ignore it |
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642 continue; |
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643 } |
611
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644 |
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645 if (FilterQueryTag(value, level, tag, manufacturer)) |
1851
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OrthancFindRequestHandler::FilterQueryTag
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646 { |
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647 ValueRepresentation vr = FromDcmtkBridge::LookupValueRepresentation(tag); |
1758 | 648 |
1851
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649 // DICOM specifies that searches must be case sensitive, except |
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650 // for tags with a PN value representation |
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651 bool sensitive = true; |
2007
655489d9165d
DicomMap::ParseDicomMetaInformation()
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652 if (vr == ValueRepresentation_PersonName) |
1851
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653 { |
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654 sensitive = caseSensitivePN; |
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OrthancFindRequestHandler::FilterQueryTag
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655 } |
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656 |
2876 | 657 lookup.AddDicomConstraint(tag, value, sensitive); |
1851
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658 } |
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659 else |
1758 | 660 { |
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661 LOG(INFO) << "Because of a patch for the manufacturer of the remote modality, " |
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662 << "ignoring constraint on tag (" << tag.Format() << ") " << FromDcmtkBridge::GetTagName(element); |
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663 } |
611
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664 } |
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665 |
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666 |
608 | 667 /** |
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668 * Run the query. |
565
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669 **/ |
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|
670 |
2876 | 671 size_t limit = (level == ResourceType_Instance) ? maxInstances_ : maxResults_; |
941
83489fddd8c5
Options to limit the number of results for an incoming C-FIND query
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|
672 |
3012
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Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
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diff
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673 |
3003
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changeset
|
674 LookupVisitor visitor(answers, context_, level, *filteredInput, sequencesToReturn); |
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|
675 context_.Apply(visitor, lookup, 0 /* "since" is not relevant to C-FIND */, limit); |
565
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676 } |
2827
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IncomingWorklistRequestFilter() to filter incoming C-FIND worklist queries
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diff
changeset
|
677 |
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IncomingWorklistRequestFilter() to filter incoming C-FIND worklist queries
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|
678 |
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|
679 void OrthancFindRequestHandler::FormatOrigin(Json::Value& origin, |
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680 const std::string& remoteIp, |
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|
681 const std::string& remoteAet, |
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682 const std::string& calledAet, |
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683 ModalityManufacturer manufacturer) |
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684 { |
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685 origin = Json::objectValue; |
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686 origin["RemoteIp"] = remoteIp; |
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687 origin["RemoteAet"] = remoteAet; |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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688 origin["CalledAet"] = calledAet; |
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Sebastien Jodogne <s.jodogne@gmail.com>
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689 origin["Manufacturer"] = EnumerationToString(manufacturer); |
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parents:
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690 } |
565
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Sebastien Jodogne <s.jodogne@gmail.com>
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691 } |