Mercurial > hg > orthanc
annotate OrthancServer/Sources/Database/Compatibility/GenericFind.cpp @ 5615:a10978a5e65c find-refactoring
expansion of single resources using ResourceFinder
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Thu, 09 May 2024 12:24:29 +0200 |
parents | 4640b7ae9a11 |
children | 1e92fb051fd7 |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2024 Osimis S.A., Belgium |
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6 * Copyright (C) 2021-2024 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
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7 * |
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8 * This program is free software: you can redistribute it and/or |
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9 * modify it under the terms of the GNU General Public License as |
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10 * published by the Free Software Foundation, either version 3 of the |
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11 * License, or (at your option) any later version. |
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12 * |
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13 * This program is distributed in the hope that it will be useful, but |
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14 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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16 * General Public License for more details. |
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17 * |
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18 * You should have received a copy of the GNU General Public License |
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19 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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20 **/ |
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21 |
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22 |
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23 #include "GenericFind.h" |
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24 |
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25 #include "../../../../OrthancFramework/Sources/DicomFormat/DicomArray.h" |
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26 #include "../../../../OrthancFramework/Sources/OrthancException.h" |
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27 |
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28 #include <stack> |
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29 |
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30 |
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31 namespace Orthanc |
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32 { |
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33 namespace Compatibility |
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34 { |
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35 static bool IsRequestWithoutContraint(const FindRequest& request) |
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36 { |
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37 return (request.GetDicomTagConstraintsCount() == 0 && |
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38 request.GetMetadataConstraintsCount() == 0 && |
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39 request.GetLabels().empty() && |
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40 request.GetOrdering().empty()); |
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41 } |
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42 |
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43 void GenericFind::ExecuteFind(std::list<std::string>& identifiers, |
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44 const FindRequest& request) |
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45 { |
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46 if (IsRequestWithoutContraint(request) && |
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47 !request.GetOrthancIdentifiers().HasPatientId() && |
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48 !request.GetOrthancIdentifiers().HasStudyId() && |
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49 !request.GetOrthancIdentifiers().HasSeriesId() && |
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50 !request.GetOrthancIdentifiers().HasInstanceId()) |
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51 { |
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52 if (request.HasLimits()) |
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53 { |
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54 transaction_.GetAllPublicIds(identifiers, request.GetLevel(), request.GetLimitsSince(), request.GetLimitsCount()); |
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55 } |
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56 else |
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57 { |
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58 transaction_.GetAllPublicIds(identifiers, request.GetLevel()); |
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59 } |
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60 } |
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61 else if (IsRequestWithoutContraint(request) && |
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62 request.GetOrthancIdentifiers().HasPatientId() && |
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63 !request.GetOrthancIdentifiers().HasStudyId() && |
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64 !request.GetOrthancIdentifiers().HasSeriesId() && |
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65 !request.GetOrthancIdentifiers().HasInstanceId()) |
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66 { |
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67 identifiers.push_back(request.GetOrthancIdentifiers().GetPatientId()); |
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68 } |
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69 else if (IsRequestWithoutContraint(request) && |
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70 !request.GetOrthancIdentifiers().HasPatientId() && |
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71 request.GetOrthancIdentifiers().HasStudyId() && |
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72 !request.GetOrthancIdentifiers().HasSeriesId() && |
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73 !request.GetOrthancIdentifiers().HasInstanceId()) |
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74 { |
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75 identifiers.push_back(request.GetOrthancIdentifiers().GetStudyId()); |
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76 } |
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77 else if (IsRequestWithoutContraint(request) && |
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78 !request.GetOrthancIdentifiers().HasPatientId() && |
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79 !request.GetOrthancIdentifiers().HasStudyId() && |
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80 request.GetOrthancIdentifiers().HasSeriesId() && |
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81 !request.GetOrthancIdentifiers().HasInstanceId()) |
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82 { |
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83 identifiers.push_back(request.GetOrthancIdentifiers().GetSeriesId()); |
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84 } |
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85 else if (IsRequestWithoutContraint(request) && |
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86 !request.GetOrthancIdentifiers().HasPatientId() && |
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87 !request.GetOrthancIdentifiers().HasStudyId() && |
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88 !request.GetOrthancIdentifiers().HasSeriesId() && |
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89 request.GetOrthancIdentifiers().HasInstanceId()) |
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90 { |
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91 identifiers.push_back(request.GetOrthancIdentifiers().GetInstanceId()); |
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92 } |
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93 else |
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94 { |
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95 throw OrthancException(ErrorCode_NotImplemented); // Not supported |
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96 } |
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97 } |
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98 |
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99 |
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100 void GenericFind::RetrieveMainDicomTags(FindResponse::Resource& target, |
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101 ResourceType level, |
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102 int64_t internalId) |
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103 { |
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104 DicomMap m; |
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105 transaction_.GetMainDicomTags(m, internalId); |
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106 |
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107 DicomArray a(m); |
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108 for (size_t i = 0; i < a.GetSize(); i++) |
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109 { |
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110 const DicomElement& element = a.GetElement(i); |
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111 if (element.GetValue().IsString()) |
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112 { |
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113 target.AddStringDicomTag(level, element.GetTag().GetGroup(), |
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114 element.GetTag().GetElement(), element.GetValue().GetContent()); |
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115 } |
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116 else |
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117 { |
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118 throw OrthancException(ErrorCode_BadParameterType); |
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119 } |
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120 } |
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121 } |
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122 |
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123 |
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124 static ResourceType GetTopLevelOfInterest(const FindRequest& request) |
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125 { |
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126 switch (request.GetLevel()) |
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127 { |
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128 case ResourceType_Patient: |
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129 return ResourceType_Patient; |
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130 |
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131 case ResourceType_Study: |
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132 if (request.IsRetrieveMainDicomTags(ResourceType_Patient) || |
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133 request.IsRetrieveMetadata(ResourceType_Patient)) |
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134 { |
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135 return ResourceType_Patient; |
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136 } |
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137 else |
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138 { |
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139 return ResourceType_Study; |
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140 } |
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141 |
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142 case ResourceType_Series: |
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143 if (request.IsRetrieveMainDicomTags(ResourceType_Patient) || |
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144 request.IsRetrieveMetadata(ResourceType_Patient)) |
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145 { |
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146 return ResourceType_Patient; |
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147 } |
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148 else if (request.IsRetrieveMainDicomTags(ResourceType_Study) || |
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149 request.IsRetrieveMetadata(ResourceType_Study)) |
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150 { |
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151 return ResourceType_Study; |
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152 } |
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153 else |
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154 { |
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155 return ResourceType_Series; |
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156 } |
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157 |
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158 case ResourceType_Instance: |
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159 if (request.IsRetrieveMainDicomTags(ResourceType_Patient) || |
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160 request.IsRetrieveMetadata(ResourceType_Patient)) |
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161 { |
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162 return ResourceType_Patient; |
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163 } |
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164 else if (request.IsRetrieveMainDicomTags(ResourceType_Study) || |
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165 request.IsRetrieveMetadata(ResourceType_Study)) |
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166 { |
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167 return ResourceType_Study; |
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168 } |
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169 else if (request.IsRetrieveMainDicomTags(ResourceType_Series) || |
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170 request.IsRetrieveMetadata(ResourceType_Series)) |
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171 { |
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172 return ResourceType_Series; |
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173 } |
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174 else |
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175 { |
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176 return ResourceType_Instance; |
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177 } |
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178 |
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179 default: |
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180 throw OrthancException(ErrorCode_ParameterOutOfRange); |
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181 } |
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182 } |
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183 |
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184 |
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185 void GenericFind::ExecuteExpand(FindResponse& response, |
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186 const FindRequest& request, |
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187 const std::string& identifier) |
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188 { |
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189 int64_t internalId; |
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190 ResourceType level; |
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191 std::string parent; |
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192 |
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193 if (request.IsRetrieveParentIdentifier()) |
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194 { |
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195 if (!transaction_.LookupResourceAndParent(internalId, level, parent, identifier)) |
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196 { |
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197 return; // The resource is not available anymore |
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198 } |
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199 |
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200 if (level == ResourceType_Patient) |
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201 { |
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202 if (!parent.empty()) |
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203 { |
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204 throw OrthancException(ErrorCode_DatabasePlugin); |
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205 } |
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206 } |
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207 else |
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208 { |
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209 if (parent.empty()) |
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210 { |
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211 throw OrthancException(ErrorCode_DatabasePlugin); |
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212 } |
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213 } |
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214 } |
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215 else |
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216 { |
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217 if (!transaction_.LookupResource(internalId, level, identifier)) |
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218 { |
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219 return; // The resource is not available anymore |
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220 } |
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221 } |
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222 |
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223 if (level != request.GetLevel()) |
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224 { |
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225 throw OrthancException(ErrorCode_DatabasePlugin); |
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226 } |
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227 |
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228 std::unique_ptr<FindResponse::Resource> resource(new FindResponse::Resource(request.GetLevel(), internalId, identifier)); |
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229 |
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230 if (request.IsRetrieveParentIdentifier()) |
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231 { |
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232 assert(!parent.empty()); |
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233 resource->SetParentIdentifier(parent); |
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234 } |
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235 |
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236 { |
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237 int64_t currentId = internalId; |
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238 ResourceType currentLevel = level; |
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239 const ResourceType topLevel = GetTopLevelOfInterest(request); |
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240 |
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241 for (;;) |
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242 { |
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243 if (request.IsRetrieveMainDicomTags(currentLevel)) |
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244 { |
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245 RetrieveMainDicomTags(*resource, currentLevel, currentId); |
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246 } |
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247 |
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248 if (request.IsRetrieveMetadata(currentLevel)) |
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249 { |
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250 transaction_.GetAllMetadata(resource->GetMetadata(currentLevel), currentId); |
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251 } |
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252 |
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253 if (currentLevel == topLevel) |
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254 { |
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255 break; |
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256 } |
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257 else |
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258 { |
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259 int64_t parentId; |
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260 if (transaction_.LookupParent(parentId, currentId)) |
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261 { |
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262 currentId = parentId; |
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263 currentLevel = GetParentResourceType(currentLevel); |
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264 } |
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265 else |
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266 { |
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267 throw OrthancException(ErrorCode_DatabasePlugin); |
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268 } |
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269 } |
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270 } |
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271 } |
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272 |
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273 if (request.IsRetrieveLabels()) |
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274 { |
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275 transaction_.ListLabels(resource->GetLabels(), internalId); |
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276 } |
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277 |
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278 if (request.IsRetrieveAttachments()) |
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279 { |
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280 std::set<FileContentType> attachments; |
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281 transaction_.ListAvailableAttachments(attachments, internalId); |
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282 |
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283 for (std::set<FileContentType>::const_iterator it = attachments.begin(); it != attachments.end(); ++it) |
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284 { |
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285 FileInfo info; |
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286 int64_t revision; |
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287 if (transaction_.LookupAttachment(info, revision, internalId, *it) && |
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288 info.GetContentType() == *it) |
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289 { |
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290 resource->AddAttachment(info); |
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291 } |
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292 else |
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293 { |
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294 throw OrthancException(ErrorCode_DatabasePlugin); |
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295 } |
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296 } |
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297 } |
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298 |
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299 if (request.IsRetrieveChildrenIdentifiers()) |
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300 { |
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301 std::list<std::string> children; |
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302 transaction_.GetChildrenPublicId(children, internalId); |
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303 |
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304 for (std::list<std::string>::const_iterator it = children.begin(); it != children.end(); ++it) |
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305 { |
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306 resource->AddChildIdentifier(*it); |
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307 } |
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308 } |
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309 |
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310 for (std::set<MetadataType>::const_iterator it = request.GetRetrieveChildrenMetadata().begin(); |
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311 it != request.GetRetrieveChildrenMetadata().end(); ++it) |
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312 { |
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313 std::list<std::string> values; |
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314 transaction_.GetChildrenMetadata(values, internalId, *it); |
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315 resource->AddChildrenMetadata(*it, values); |
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316 } |
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317 |
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318 if (request.IsRetrieveOneInstanceIdentifier()) |
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319 { |
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320 int64_t currentId = internalId; |
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321 ResourceType currentLevel = level; |
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322 |
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323 while (currentLevel != ResourceType_Instance) |
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324 { |
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325 std::list<int64_t> children; |
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326 transaction_.GetChildrenInternalId(children, currentId); |
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327 if (children.empty()) |
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328 { |
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329 throw OrthancException(ErrorCode_DatabasePlugin); |
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330 } |
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331 else |
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332 { |
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333 currentId = children.front(); |
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preliminary support of requestedTags
Sebastien Jodogne <s.jodogne@gmail.com>
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334 currentLevel = GetChildResourceType(currentLevel); |
5596
81a29ad7fb4b
added possibility to retrieve main DICOM tags and metadata at any level
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parents:
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335 } |
81a29ad7fb4b
added possibility to retrieve main DICOM tags and metadata at any level
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parents:
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336 } |
5609
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preliminary support of requestedTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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337 |
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preliminary support of requestedTags
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parents:
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338 resource->SetOneInstanceIdentifier(transaction_.GetPublicId(currentId)); |
5596
81a29ad7fb4b
added possibility to retrieve main DICOM tags and metadata at any level
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parents:
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339 } |
81a29ad7fb4b
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parents:
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changeset
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340 |
5593
862b54b4cfe2
implemented the default multi-stage find/expand
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parents:
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341 response.Add(resource.release()); |
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introduction of FindRequest and FindResponse
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parents:
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342 } |
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introduction of FindRequest and FindResponse
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parents:
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343 } |
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introduction of FindRequest and FindResponse
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parents:
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344 } |