Mercurial > hg > orthanc
annotate OrthancFramework/Sources/DicomParsing/DicomWebJsonVisitor.cpp @ 4771:9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
|---|---|
| date | Wed, 25 Aug 2021 17:20:21 +0200 |
| parents | 979ae3ea3381 |
| children | 7053502fbf97 |
| rev | line source |
|---|---|
| 3202 | 1 /** |
| 2 * Orthanc - A Lightweight, RESTful DICOM Store | |
| 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics | |
| 4 * Department, University Hospital of Liege, Belgium | |
|
4437
d9473bd5ed43
upgrade to year 2021
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4304
diff
changeset
|
5 * Copyright (C) 2017-2021 Osimis S.A., Belgium |
| 3202 | 6 * |
| 7 * This program is free software: you can redistribute it and/or | |
|
4119
bf7b9edf6b81
re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
8 * modify it under the terms of the GNU Lesser General Public License |
|
bf7b9edf6b81
re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
9 * as published by the Free Software Foundation, either version 3 of |
|
bf7b9edf6b81
re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
10 * the License, or (at your option) any later version. |
| 3202 | 11 * |
| 12 * This program is distributed in the hope that it will be useful, but | |
| 13 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
|
4119
bf7b9edf6b81
re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
15 * Lesser General Public License for more details. |
| 3202 | 16 * |
|
4119
bf7b9edf6b81
re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
17 * You should have received a copy of the GNU Lesser General Public |
|
bf7b9edf6b81
re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
18 * License along with this program. If not, see |
|
bf7b9edf6b81
re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
19 * <http://www.gnu.org/licenses/>. |
| 3202 | 20 **/ |
| 21 | |
| 22 | |
| 23 #include "../PrecompiledHeaders.h" | |
| 24 #include "DicomWebJsonVisitor.h" | |
| 25 | |
| 4304 | 26 #include "../Logging.h" |
| 3202 | 27 #include "../OrthancException.h" |
| 28 #include "../Toolbox.h" | |
| 29 #include "FromDcmtkBridge.h" | |
| 30 | |
| 31 #include <boost/math/special_functions/round.hpp> | |
| 32 #include <boost/lexical_cast.hpp> | |
| 33 | |
| 34 | |
| 35 static const char* const KEY_ALPHABETIC = "Alphabetic"; | |
|
3221
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
36 static const char* const KEY_IDEOGRAPHIC = "Ideographic"; |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
37 static const char* const KEY_PHONETIC = "Phonetic"; |
|
4655
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
38 static const char* const KEY_BULK_DATA = "BulkData"; |
| 3202 | 39 static const char* const KEY_BULK_DATA_URI = "BulkDataURI"; |
| 40 static const char* const KEY_INLINE_BINARY = "InlineBinary"; | |
| 41 static const char* const KEY_SQ = "SQ"; | |
|
3221
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
42 static const char* const KEY_TAG = "tag"; |
| 3202 | 43 static const char* const KEY_VALUE = "Value"; |
| 44 static const char* const KEY_VR = "vr"; | |
|
4655
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
45 static const char* const KEY_NUMBER = "number"; |
| 3202 | 46 |
| 47 | |
| 48 namespace Orthanc | |
| 49 { | |
| 50 #if ORTHANC_ENABLE_PUGIXML == 1 | |
|
3221
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
51 static void DecomposeXmlPersonName(pugi::xml_node& target, |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
52 const std::string& source) |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
53 { |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
54 std::vector<std::string> tokens; |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
55 Toolbox::TokenizeString(tokens, source, '^'); |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
56 |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
57 if (tokens.size() >= 1) |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
58 { |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
59 target.append_child("FamilyName").text() = tokens[0].c_str(); |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
60 } |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
61 |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
62 if (tokens.size() >= 2) |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
63 { |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
64 target.append_child("GivenName").text() = tokens[1].c_str(); |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
65 } |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
66 |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
67 if (tokens.size() >= 3) |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
68 { |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
69 target.append_child("MiddleName").text() = tokens[2].c_str(); |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
70 } |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
71 |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
72 if (tokens.size() >= 4) |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
73 { |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
74 target.append_child("NamePrefix").text() = tokens[3].c_str(); |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
75 } |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
76 |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
77 if (tokens.size() >= 5) |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
78 { |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
79 target.append_child("NameSuffix").text() = tokens[4].c_str(); |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
80 } |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
81 } |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
82 |
| 3202 | 83 static void ExploreXmlDataset(pugi::xml_node& target, |
| 84 const Json::Value& source) | |
| 85 { | |
|
3221
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
86 // http://dicom.nema.org/medical/dicom/current/output/chtml/part18/sect_F.3.html#table_F.3.1-1 |
| 3202 | 87 assert(source.type() == Json::objectValue); |
| 88 | |
| 89 Json::Value::Members members = source.getMemberNames(); | |
| 90 for (size_t i = 0; i < members.size(); i++) | |
| 91 { | |
| 92 const DicomTag tag = FromDcmtkBridge::ParseTag(members[i]); | |
| 93 const Json::Value& content = source[members[i]]; | |
| 94 | |
| 95 assert(content.type() == Json::objectValue && | |
|
3221
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
96 content.isMember(KEY_VR) && |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
97 content[KEY_VR].type() == Json::stringValue); |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
98 const std::string vr = content[KEY_VR].asString(); |
| 3202 | 99 |
| 100 const std::string keyword = FromDcmtkBridge::GetTagName(tag, ""); | |
| 101 | |
| 102 pugi::xml_node node = target.append_child("DicomAttribute"); | |
|
3221
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
103 node.append_attribute(KEY_TAG).set_value(members[i].c_str()); |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
104 node.append_attribute(KEY_VR).set_value(vr.c_str()); |
| 3202 | 105 |
| 106 if (keyword != std::string(DcmTag_ERROR_TagName)) | |
| 107 { | |
| 108 node.append_attribute("keyword").set_value(keyword.c_str()); | |
| 109 } | |
| 110 | |
| 111 if (content.isMember(KEY_VALUE)) | |
| 112 { | |
| 113 assert(content[KEY_VALUE].type() == Json::arrayValue); | |
| 114 | |
| 115 for (Json::Value::ArrayIndex j = 0; j < content[KEY_VALUE].size(); j++) | |
| 116 { | |
| 117 std::string number = boost::lexical_cast<std::string>(j + 1); | |
| 118 | |
| 119 if (vr == "SQ") | |
| 120 { | |
| 121 if (content[KEY_VALUE][j].type() == Json::objectValue) | |
| 122 { | |
| 123 pugi::xml_node child = node.append_child("Item"); | |
|
4655
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
124 child.append_attribute(KEY_NUMBER).set_value(number.c_str()); |
| 3202 | 125 ExploreXmlDataset(child, content[KEY_VALUE][j]); |
| 126 } | |
| 127 } | |
| 128 if (vr == "PN") | |
| 129 { | |
|
3221
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
130 bool hasAlphabetic = (content[KEY_VALUE][j].isMember(KEY_ALPHABETIC) && |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
131 content[KEY_VALUE][j][KEY_ALPHABETIC].type() == Json::stringValue); |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
132 |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
133 bool hasIdeographic = (content[KEY_VALUE][j].isMember(KEY_IDEOGRAPHIC) && |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
134 content[KEY_VALUE][j][KEY_IDEOGRAPHIC].type() == Json::stringValue); |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
135 |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
136 bool hasPhonetic = (content[KEY_VALUE][j].isMember(KEY_PHONETIC) && |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
137 content[KEY_VALUE][j][KEY_PHONETIC].type() == Json::stringValue); |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
138 |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
139 if (hasAlphabetic || |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
140 hasIdeographic || |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
141 hasPhonetic) |
| 3202 | 142 { |
| 143 pugi::xml_node child = node.append_child("PersonName"); | |
|
4655
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
144 child.append_attribute(KEY_NUMBER).set_value(number.c_str()); |
|
3221
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
145 |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
146 if (hasAlphabetic) |
| 3202 | 147 { |
|
3221
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
148 pugi::xml_node name = child.append_child(KEY_ALPHABETIC); |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
149 DecomposeXmlPersonName(name, content[KEY_VALUE][j][KEY_ALPHABETIC].asString()); |
| 3202 | 150 } |
|
3221
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
151 |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
152 if (hasIdeographic) |
| 3202 | 153 { |
|
3221
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
154 pugi::xml_node name = child.append_child(KEY_IDEOGRAPHIC); |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
155 DecomposeXmlPersonName(name, content[KEY_VALUE][j][KEY_IDEOGRAPHIC].asString()); |
| 3202 | 156 } |
|
3221
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
157 |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
158 if (hasPhonetic) |
| 3202 | 159 { |
|
3221
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
160 pugi::xml_node name = child.append_child(KEY_PHONETIC); |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
161 DecomposeXmlPersonName(name, content[KEY_VALUE][j][KEY_PHONETIC].asString()); |
| 3202 | 162 } |
| 163 } | |
| 164 } | |
| 165 else | |
| 166 { | |
|
4655
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
167 pugi::xml_node child = node.append_child(KEY_VALUE); |
|
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
168 child.append_attribute(KEY_NUMBER).set_value(number.c_str()); |
| 3202 | 169 |
| 170 switch (content[KEY_VALUE][j].type()) | |
| 171 { | |
| 172 case Json::stringValue: | |
| 173 child.text() = content[KEY_VALUE][j].asCString(); | |
| 174 break; | |
| 175 | |
| 176 case Json::realValue: | |
| 177 child.text() = content[KEY_VALUE][j].asFloat(); | |
| 178 break; | |
| 179 | |
| 180 case Json::intValue: | |
| 181 child.text() = content[KEY_VALUE][j].asInt(); | |
| 182 break; | |
| 183 | |
| 184 case Json::uintValue: | |
| 185 child.text() = content[KEY_VALUE][j].asUInt(); | |
| 186 break; | |
| 187 | |
| 188 default: | |
| 189 break; | |
| 190 } | |
| 191 } | |
| 192 } | |
| 193 } | |
| 194 else if (content.isMember(KEY_BULK_DATA_URI) && | |
| 195 content[KEY_BULK_DATA_URI].type() == Json::stringValue) | |
| 196 { | |
|
4655
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
197 pugi::xml_node child = node.append_child(KEY_BULK_DATA); |
| 3202 | 198 child.append_attribute("URI").set_value(content[KEY_BULK_DATA_URI].asCString()); |
| 199 } | |
| 200 else if (content.isMember(KEY_INLINE_BINARY) && | |
| 201 content[KEY_INLINE_BINARY].type() == Json::stringValue) | |
| 202 { | |
|
4655
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
203 pugi::xml_node child = node.append_child(KEY_INLINE_BINARY); |
| 3202 | 204 child.text() = content[KEY_INLINE_BINARY].asCString(); |
| 205 } | |
| 206 } | |
| 207 } | |
| 208 #endif | |
| 209 | |
| 210 | |
| 211 #if ORTHANC_ENABLE_PUGIXML == 1 | |
| 212 static void DicomWebJsonToXml(pugi::xml_document& target, | |
| 213 const Json::Value& source) | |
| 214 { | |
| 215 pugi::xml_node root = target.append_child("NativeDicomModel"); | |
| 216 root.append_attribute("xmlns").set_value("http://dicom.nema.org/PS3.19/models/NativeDICOM"); | |
| 217 root.append_attribute("xsi:schemaLocation").set_value("http://dicom.nema.org/PS3.19/models/NativeDICOM"); | |
| 218 root.append_attribute("xmlns:xsi").set_value("http://www.w3.org/2001/XMLSchema-instance"); | |
| 219 | |
| 220 ExploreXmlDataset(root, source); | |
| 221 | |
| 222 pugi::xml_node decl = target.prepend_child(pugi::node_declaration); | |
| 223 decl.append_attribute("version").set_value("1.0"); | |
| 224 decl.append_attribute("encoding").set_value("utf-8"); | |
| 225 } | |
| 226 #endif | |
| 227 | |
| 228 | |
| 229 std::string DicomWebJsonVisitor::FormatTag(const DicomTag& tag) | |
| 230 { | |
| 231 char buf[16]; | |
| 232 sprintf(buf, "%04X%04X", tag.GetGroup(), tag.GetElement()); | |
| 233 return std::string(buf); | |
| 234 } | |
| 235 | |
| 236 | |
| 237 Json::Value& DicomWebJsonVisitor::CreateNode(const std::vector<DicomTag>& parentTags, | |
| 238 const std::vector<size_t>& parentIndexes, | |
| 239 const DicomTag& tag) | |
| 240 { | |
| 241 assert(parentTags.size() == parentIndexes.size()); | |
| 242 | |
| 243 Json::Value* node = &result_; | |
| 244 | |
| 245 for (size_t i = 0; i < parentTags.size(); i++) | |
| 246 { | |
| 247 std::string t = FormatTag(parentTags[i]); | |
| 248 | |
| 249 if (!node->isMember(t)) | |
| 250 { | |
| 251 Json::Value item = Json::objectValue; | |
| 252 item[KEY_VR] = KEY_SQ; | |
| 253 item[KEY_VALUE] = Json::arrayValue; | |
| 254 item[KEY_VALUE].append(Json::objectValue); | |
| 255 (*node) [t] = item; | |
| 256 | |
| 257 node = &(*node)[t][KEY_VALUE][0]; | |
| 258 } | |
| 259 else if ((*node) [t].type() != Json::objectValue || | |
| 260 !(*node) [t].isMember(KEY_VR) || | |
| 261 (*node) [t][KEY_VR].type() != Json::stringValue || | |
| 262 (*node) [t][KEY_VR].asString() != KEY_SQ || | |
| 263 !(*node) [t].isMember(KEY_VALUE) || | |
| 264 (*node) [t][KEY_VALUE].type() != Json::arrayValue) | |
| 265 { | |
| 266 throw OrthancException(ErrorCode_InternalError); | |
| 267 } | |
| 268 else | |
| 269 { | |
| 270 size_t currentSize = (*node) [t][KEY_VALUE].size(); | |
| 271 | |
| 272 if (parentIndexes[i] < currentSize) | |
| 273 { | |
| 274 // The node already exists | |
| 275 } | |
| 276 else if (parentIndexes[i] == currentSize) | |
| 277 { | |
| 278 (*node) [t][KEY_VALUE].append(Json::objectValue); | |
| 279 } | |
| 280 else | |
| 281 { | |
| 282 throw OrthancException(ErrorCode_InternalError); | |
| 283 } | |
| 284 | |
| 285 node = &(*node) [t][KEY_VALUE][Json::ArrayIndex(parentIndexes[i])]; | |
| 286 } | |
| 287 } | |
| 288 | |
| 289 assert(node->type() == Json::objectValue); | |
| 290 | |
| 291 std::string t = FormatTag(tag); | |
| 292 if (node->isMember(t)) | |
| 293 { | |
| 294 throw OrthancException(ErrorCode_InternalError); | |
| 295 } | |
| 296 else | |
| 297 { | |
| 298 (*node) [t] = Json::objectValue; | |
| 299 return (*node) [t]; | |
| 300 } | |
| 301 } | |
| 302 | |
| 303 | |
| 304 Json::Value DicomWebJsonVisitor::FormatInteger(int64_t value) | |
| 305 { | |
| 306 if (value < 0) | |
| 307 { | |
| 308 return Json::Value(static_cast<int32_t>(value)); | |
| 309 } | |
| 310 else | |
| 311 { | |
| 312 return Json::Value(static_cast<uint32_t>(value)); | |
| 313 } | |
| 314 } | |
| 315 | |
| 316 | |
| 317 Json::Value DicomWebJsonVisitor::FormatDouble(double value) | |
| 318 { | |
| 3312 | 319 try |
| 320 { | |
| 321 long long a = boost::math::llround<double>(value); | |
| 3202 | 322 |
| 3312 | 323 double d = fabs(value - static_cast<double>(a)); |
| 3202 | 324 |
| 3312 | 325 if (d <= std::numeric_limits<double>::epsilon() * 100.0) |
| 326 { | |
| 327 return FormatInteger(a); | |
| 328 } | |
| 329 else | |
| 330 { | |
| 331 return Json::Value(value); | |
| 332 } | |
| 333 } | |
| 334 catch (boost::math::rounding_error&) | |
| 3202 | 335 { |
| 3312 | 336 // Can occur if "long long" is too small to receive this value |
| 337 // (e.g. infinity) | |
| 3202 | 338 return Json::Value(value); |
| 339 } | |
| 340 } | |
| 341 | |
| 4297 | 342 DicomWebJsonVisitor::DicomWebJsonVisitor() : |
| 343 formatter_(NULL) | |
| 344 { | |
| 345 Clear(); | |
| 346 } | |
| 347 | |
| 348 void DicomWebJsonVisitor::SetFormatter(DicomWebJsonVisitor::IBinaryFormatter &formatter) | |
| 349 { | |
| 350 formatter_ = &formatter; | |
| 351 } | |
| 352 | |
| 353 void DicomWebJsonVisitor::Clear() | |
| 354 { | |
| 355 result_ = Json::objectValue; | |
| 356 } | |
| 357 | |
| 358 const Json::Value &DicomWebJsonVisitor::GetResult() const | |
| 359 { | |
| 360 return result_; | |
| 361 } | |
| 362 | |
| 3202 | 363 |
| 364 #if ORTHANC_ENABLE_PUGIXML == 1 | |
|
3203
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3202
diff
changeset
|
365 void DicomWebJsonVisitor::FormatXml(std::string& target) const |
| 3202 | 366 { |
|
3203
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3202
diff
changeset
|
367 pugi::xml_document doc; |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3202
diff
changeset
|
368 DicomWebJsonToXml(doc, result_); |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3202
diff
changeset
|
369 Toolbox::XmlToString(target, doc); |
| 3202 | 370 } |
| 371 #endif | |
| 372 | |
| 373 | |
|
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
374 ITagVisitor::Action |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
375 DicomWebJsonVisitor::VisitNotSupported(const std::vector<DicomTag> &parentTags, |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
376 const std::vector<size_t> &parentIndexes, |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
377 const DicomTag &tag, |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
378 ValueRepresentation vr) |
| 4297 | 379 { |
|
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
380 return Action_None; |
| 4297 | 381 } |
| 382 | |
| 383 | |
|
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
384 ITagVisitor::Action |
|
4737
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4734
diff
changeset
|
385 DicomWebJsonVisitor::VisitSequence(const std::vector<DicomTag>& parentTags, |
|
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4734
diff
changeset
|
386 const std::vector<size_t>& parentIndexes, |
|
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4734
diff
changeset
|
387 const DicomTag& tag, |
|
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4734
diff
changeset
|
388 size_t countItems) |
| 3202 | 389 { |
|
4737
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4734
diff
changeset
|
390 if (countItems == 0 && |
|
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4734
diff
changeset
|
391 tag.GetElement() != 0x0000) |
| 3202 | 392 { |
| 393 Json::Value& node = CreateNode(parentTags, parentIndexes, tag); | |
| 394 node[KEY_VR] = EnumerationToString(ValueRepresentation_Sequence); | |
| 395 } | |
|
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
396 |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
397 return Action_None; |
| 3202 | 398 } |
| 399 | |
| 400 | |
|
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
401 ITagVisitor::Action |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
402 DicomWebJsonVisitor::VisitBinary(const std::vector<DicomTag>& parentTags, |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
403 const std::vector<size_t>& parentIndexes, |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
404 const DicomTag& tag, |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
405 ValueRepresentation vr, |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
406 const void* data, |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
407 size_t size) |
| 3202 | 408 { |
| 409 assert(vr == ValueRepresentation_OtherByte || | |
| 410 vr == ValueRepresentation_OtherDouble || | |
| 411 vr == ValueRepresentation_OtherFloat || | |
| 412 vr == ValueRepresentation_OtherLong || | |
| 413 vr == ValueRepresentation_OtherWord || | |
| 414 vr == ValueRepresentation_Unknown); | |
| 415 | |
| 416 if (tag.GetElement() != 0x0000) | |
| 417 { | |
| 418 BinaryMode mode; | |
| 419 std::string bulkDataUri; | |
| 420 | |
| 421 if (formatter_ == NULL) | |
| 422 { | |
| 423 mode = BinaryMode_InlineBinary; | |
| 424 } | |
| 425 else | |
| 426 { | |
| 427 mode = formatter_->Format(bulkDataUri, parentTags, parentIndexes, tag, vr); | |
| 428 } | |
| 429 | |
| 430 if (mode != BinaryMode_Ignore) | |
| 431 { | |
| 432 Json::Value& node = CreateNode(parentTags, parentIndexes, tag); | |
| 433 node[KEY_VR] = EnumerationToString(vr); | |
| 434 | |
|
4655
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
435 /** |
|
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
436 * The test on "size > 0" is new in Orthanc 1.9.3, and fixes |
|
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
437 * issue #195 (No need for BulkDataURI when Data Element is |
|
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
438 * empty): https://bugs.orthanc-server.com/show_bug.cgi?id=195 |
|
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
439 **/ |
|
4660
4e81412ead0a
in DICOMweb JSON, BulkDataURI is forced for sequences and pixel data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4655
diff
changeset
|
440 if (size > 0 || |
|
4e81412ead0a
in DICOMweb JSON, BulkDataURI is forced for sequences and pixel data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4655
diff
changeset
|
441 tag == DICOM_TAG_PIXEL_DATA || |
|
4e81412ead0a
in DICOMweb JSON, BulkDataURI is forced for sequences and pixel data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4655
diff
changeset
|
442 vr == ValueRepresentation_Sequence /* new in Orthanc 1.9.4 */) |
| 3202 | 443 { |
|
4655
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
444 switch (mode) |
|
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
445 { |
|
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
446 case BinaryMode_BulkDataUri: |
|
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
447 node[KEY_BULK_DATA_URI] = bulkDataUri; |
|
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
448 break; |
| 3202 | 449 |
|
4655
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
450 case BinaryMode_InlineBinary: |
|
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
451 { |
|
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
452 std::string tmp(static_cast<const char*>(data), size); |
| 3202 | 453 |
|
4655
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
454 std::string base64; |
|
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
455 Toolbox::EncodeBase64(base64, tmp); |
| 3202 | 456 |
|
4655
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
457 node[KEY_INLINE_BINARY] = base64; |
|
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
458 break; |
|
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
459 } |
|
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
460 |
|
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
461 default: |
|
9f7eef20bc7d
Fix issue #195 (No need for BulkDataURI when Data Element is empty)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
462 throw OrthancException(ErrorCode_ParameterOutOfRange); |
| 3202 | 463 } |
| 464 } | |
| 465 } | |
| 466 } | |
|
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
467 |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
468 return Action_None; |
| 3202 | 469 } |
| 470 | |
| 471 | |
|
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
472 ITagVisitor::Action |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
473 DicomWebJsonVisitor::VisitIntegers(const std::vector<DicomTag>& parentTags, |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
474 const std::vector<size_t>& parentIndexes, |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
475 const DicomTag& tag, |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
476 ValueRepresentation vr, |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
477 const std::vector<int64_t>& values) |
| 3202 | 478 { |
| 479 if (tag.GetElement() != 0x0000 && | |
| 480 vr != ValueRepresentation_NotSupported) | |
| 481 { | |
| 482 Json::Value& node = CreateNode(parentTags, parentIndexes, tag); | |
| 483 node[KEY_VR] = EnumerationToString(vr); | |
| 484 | |
| 485 if (!values.empty()) | |
| 486 { | |
| 487 Json::Value content = Json::arrayValue; | |
| 488 for (size_t i = 0; i < values.size(); i++) | |
| 489 { | |
| 490 content.append(FormatInteger(values[i])); | |
| 491 } | |
| 492 | |
| 493 node[KEY_VALUE] = content; | |
| 494 } | |
| 495 } | |
|
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
496 |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
497 return Action_None; |
| 3202 | 498 } |
| 499 | |
|
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
500 ITagVisitor::Action |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
501 DicomWebJsonVisitor::VisitDoubles(const std::vector<DicomTag>& parentTags, |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
502 const std::vector<size_t>& parentIndexes, |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
503 const DicomTag& tag, |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
504 ValueRepresentation vr, |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
505 const std::vector<double>& values) |
| 3202 | 506 { |
| 507 if (tag.GetElement() != 0x0000 && | |
| 508 vr != ValueRepresentation_NotSupported) | |
| 509 { | |
| 510 Json::Value& node = CreateNode(parentTags, parentIndexes, tag); | |
| 511 node[KEY_VR] = EnumerationToString(vr); | |
| 512 | |
| 513 if (!values.empty()) | |
| 514 { | |
| 515 Json::Value content = Json::arrayValue; | |
| 516 for (size_t i = 0; i < values.size(); i++) | |
| 517 { | |
| 518 content.append(FormatDouble(values[i])); | |
| 519 } | |
| 520 | |
| 521 node[KEY_VALUE] = content; | |
| 522 } | |
| 523 } | |
|
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
524 |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
525 return Action_None; |
| 3202 | 526 } |
| 527 | |
| 528 | |
|
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
529 ITagVisitor::Action |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
530 DicomWebJsonVisitor::VisitAttributes(const std::vector<DicomTag>& parentTags, |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
531 const std::vector<size_t>& parentIndexes, |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
532 const DicomTag& tag, |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
533 const std::vector<DicomTag>& values) |
| 3202 | 534 { |
| 535 if (tag.GetElement() != 0x0000) | |
| 536 { | |
| 537 Json::Value& node = CreateNode(parentTags, parentIndexes, tag); | |
| 538 node[KEY_VR] = EnumerationToString(ValueRepresentation_AttributeTag); | |
| 539 | |
| 540 if (!values.empty()) | |
| 541 { | |
| 542 Json::Value content = Json::arrayValue; | |
| 543 for (size_t i = 0; i < values.size(); i++) | |
| 544 { | |
| 545 content.append(FormatTag(values[i])); | |
| 546 } | |
| 547 | |
| 548 node[KEY_VALUE] = content; | |
| 549 } | |
| 550 } | |
|
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
551 |
|
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4660
diff
changeset
|
552 return Action_None; |
| 3202 | 553 } |
| 554 | |
| 555 | |
| 556 ITagVisitor::Action | |
| 557 DicomWebJsonVisitor::VisitString(std::string& newValue, | |
| 558 const std::vector<DicomTag>& parentTags, | |
| 559 const std::vector<size_t>& parentIndexes, | |
| 560 const DicomTag& tag, | |
| 561 ValueRepresentation vr, | |
| 562 const std::string& value) | |
| 563 { | |
| 564 if (tag.GetElement() == 0x0000 || | |
| 565 vr == ValueRepresentation_NotSupported) | |
| 566 { | |
| 567 return Action_None; | |
| 568 } | |
| 569 else | |
| 570 { | |
| 571 Json::Value& node = CreateNode(parentTags, parentIndexes, tag); | |
| 572 node[KEY_VR] = EnumerationToString(vr); | |
| 573 | |
|
3420
0a0e7eca95ae
fix encoding in DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3391
diff
changeset
|
574 #if 0 |
|
0a0e7eca95ae
fix encoding in DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3391
diff
changeset
|
575 /** |
|
0a0e7eca95ae
fix encoding in DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3391
diff
changeset
|
576 * TODO - The JSON file has an UTF-8 encoding, thus DCMTK |
|
0a0e7eca95ae
fix encoding in DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3391
diff
changeset
|
577 * replaces the specific character set with "ISO_IR 192" |
|
0a0e7eca95ae
fix encoding in DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3391
diff
changeset
|
578 * (UNICODE UTF-8). On Google Cloud Healthcare, however, the |
|
0a0e7eca95ae
fix encoding in DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3391
diff
changeset
|
579 * source encoding is reported, which seems more logical. We |
|
0a0e7eca95ae
fix encoding in DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3391
diff
changeset
|
580 * thus choose the Google convention. Enabling this block will |
|
0a0e7eca95ae
fix encoding in DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3391
diff
changeset
|
581 * mimic the DCMTK behavior. |
|
0a0e7eca95ae
fix encoding in DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3391
diff
changeset
|
582 **/ |
| 3202 | 583 if (tag == DICOM_TAG_SPECIFIC_CHARACTER_SET) |
| 584 { | |
| 585 node[KEY_VALUE].append("ISO_IR 192"); | |
| 586 } | |
| 587 else | |
|
3420
0a0e7eca95ae
fix encoding in DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3391
diff
changeset
|
588 #endif |
| 3202 | 589 { |
| 590 std::string truncated; | |
| 591 | |
| 592 if (!value.empty() && | |
| 593 value[value.size() - 1] == '\0') | |
| 594 { | |
| 595 truncated = value.substr(0, value.size() - 1); | |
| 596 } | |
| 597 else | |
| 598 { | |
| 599 truncated = value; | |
| 600 } | |
|
3420
0a0e7eca95ae
fix encoding in DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3391
diff
changeset
|
601 |
| 3202 | 602 if (!truncated.empty()) |
| 603 { | |
| 604 std::vector<std::string> tokens; | |
| 605 Toolbox::TokenizeString(tokens, truncated, '\\'); | |
| 606 | |
|
3420
0a0e7eca95ae
fix encoding in DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3391
diff
changeset
|
607 if (tag == DICOM_TAG_SPECIFIC_CHARACTER_SET && |
|
0a0e7eca95ae
fix encoding in DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3391
diff
changeset
|
608 tokens.size() > 1 && |
|
0a0e7eca95ae
fix encoding in DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3391
diff
changeset
|
609 tokens[0].empty()) |
|
0a0e7eca95ae
fix encoding in DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3391
diff
changeset
|
610 { |
|
3448
b3bdd6dc10f2
don't change encoding of SpecificCharacterSet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3420
diff
changeset
|
611 // Specific character set with code extension: Remove the |
|
b3bdd6dc10f2
don't change encoding of SpecificCharacterSet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3420
diff
changeset
|
612 // first element from the vector of encodings |
|
b3bdd6dc10f2
don't change encoding of SpecificCharacterSet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3420
diff
changeset
|
613 tokens.erase(tokens.begin()); |
|
3420
0a0e7eca95ae
fix encoding in DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3391
diff
changeset
|
614 } |
|
0a0e7eca95ae
fix encoding in DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3391
diff
changeset
|
615 |
| 3202 | 616 node[KEY_VALUE] = Json::arrayValue; |
| 617 for (size_t i = 0; i < tokens.size(); i++) | |
| 618 { | |
| 619 try | |
| 620 { | |
| 621 switch (vr) | |
| 622 { | |
| 623 case ValueRepresentation_PersonName: | |
| 624 { | |
| 4200 | 625 Json::Value tmp = Json::objectValue; |
| 3202 | 626 if (!tokens[i].empty()) |
| 627 { | |
|
3221
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
628 std::vector<std::string> components; |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
629 Toolbox::TokenizeString(components, tokens[i], '='); |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
630 |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
631 if (components.size() >= 1) |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
632 { |
| 4200 | 633 tmp[KEY_ALPHABETIC] = components[0]; |
|
3221
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
634 } |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
635 |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
636 if (components.size() >= 2) |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
637 { |
| 4200 | 638 tmp[KEY_IDEOGRAPHIC] = components[1]; |
|
3221
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
639 } |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
640 |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
641 if (components.size() >= 3) |
|
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
642 { |
| 4200 | 643 tmp[KEY_PHONETIC] = components[2]; |
|
3221
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
644 } |
| 3202 | 645 } |
|
3221
4be505c2ac56
Separation of ideographic and phonetic characters in DICOMweb JSON and XML
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3203
diff
changeset
|
646 |
| 4200 | 647 node[KEY_VALUE].append(tmp); |
| 3202 | 648 break; |
| 649 } | |
| 650 | |
| 651 case ValueRepresentation_IntegerString: | |
| 3391 | 652 { |
| 653 /** | |
| 654 * The calls to "StripSpaces()" below fix the | |
| 655 * issue reported by Rana Asim Wajid on 2019-06-05 | |
| 656 * ("Error Exception while invoking plugin service | |
| 657 * 32: Bad file format"): | |
| 658 * https://groups.google.com/d/msg/orthanc-users/T32FovWPcCE/-hKFbfRJBgAJ | |
| 659 **/ | |
| 660 | |
| 4297 | 661 std::string t = Toolbox::StripSpaces(tokens[i]); |
| 3391 | 662 if (t.empty()) |
| 3202 | 663 { |
| 664 node[KEY_VALUE].append(Json::nullValue); | |
| 665 } | |
| 666 else | |
| 667 { | |
| 4200 | 668 int64_t tmp = boost::lexical_cast<int64_t>(t); |
| 669 node[KEY_VALUE].append(FormatInteger(tmp)); | |
| 3202 | 670 } |
| 3391 | 671 |
| 3202 | 672 break; |
| 3391 | 673 } |
| 3202 | 674 |
| 675 case ValueRepresentation_DecimalString: | |
| 3391 | 676 { |
| 4297 | 677 std::string t = Toolbox::StripSpaces(tokens[i]); |
| 3391 | 678 if (t.empty()) |
| 3202 | 679 { |
| 680 node[KEY_VALUE].append(Json::nullValue); | |
| 681 } | |
| 682 else | |
| 683 { | |
| 4200 | 684 double tmp = boost::lexical_cast<double>(t); |
| 685 node[KEY_VALUE].append(FormatDouble(tmp)); | |
| 3202 | 686 } |
| 3391 | 687 |
| 3202 | 688 break; |
| 3391 | 689 } |
| 690 | |
| 3202 | 691 default: |
| 692 if (tokens[i].empty()) | |
| 693 { | |
| 694 node[KEY_VALUE].append(Json::nullValue); | |
| 695 } | |
| 696 else | |
| 697 { | |
| 698 node[KEY_VALUE].append(tokens[i]); | |
| 699 } | |
| 700 | |
| 701 break; | |
| 702 } | |
| 703 } | |
| 704 catch (boost::bad_lexical_cast&) | |
| 705 { | |
|
3464
418a89acef3b
In DICOM-to-DICOMweb/JSON conversion, be more tolerant wrt. invalid DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3448
diff
changeset
|
706 std::string tmp; |
|
418a89acef3b
In DICOM-to-DICOMweb/JSON conversion, be more tolerant wrt. invalid DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3448
diff
changeset
|
707 if (value.size() < 64 && |
|
418a89acef3b
In DICOM-to-DICOMweb/JSON conversion, be more tolerant wrt. invalid DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3448
diff
changeset
|
708 Toolbox::IsAsciiString(value)) |
|
418a89acef3b
In DICOM-to-DICOMweb/JSON conversion, be more tolerant wrt. invalid DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3448
diff
changeset
|
709 { |
|
418a89acef3b
In DICOM-to-DICOMweb/JSON conversion, be more tolerant wrt. invalid DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3448
diff
changeset
|
710 tmp = ": " + value; |
|
418a89acef3b
In DICOM-to-DICOMweb/JSON conversion, be more tolerant wrt. invalid DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3448
diff
changeset
|
711 } |
|
418a89acef3b
In DICOM-to-DICOMweb/JSON conversion, be more tolerant wrt. invalid DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3448
diff
changeset
|
712 |
|
418a89acef3b
In DICOM-to-DICOMweb/JSON conversion, be more tolerant wrt. invalid DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3448
diff
changeset
|
713 LOG(WARNING) << "Ignoring DICOM tag (" << tag.Format() |
|
418a89acef3b
In DICOM-to-DICOMweb/JSON conversion, be more tolerant wrt. invalid DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3448
diff
changeset
|
714 << ") with invalid content for VR " << EnumerationToString(vr) << tmp; |
| 3202 | 715 } |
| 716 } | |
| 717 } | |
| 718 } | |
| 719 } | |
| 720 | |
| 721 return Action_None; | |
| 722 } | |
| 723 } |