Mercurial > hg > orthanc
annotate OrthancServer/Sources/OrthancWebDav.cpp @ 4262:9a01e0f89b6d
ServeFolders plugin: mime type for ".map" file extension
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
|---|---|
| date | Fri, 30 Oct 2020 09:00:24 +0100 |
| parents | 2221051b42df |
| children | d31cba1e27ac |
| rev | line source |
|---|---|
| 4240 | 1 /** |
| 2 * Orthanc - A Lightweight, RESTful DICOM Store | |
| 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics | |
| 4 * Department, University Hospital of Liege, Belgium | |
| 5 * Copyright (C) 2017-2020 Osimis S.A., Belgium | |
| 6 * | |
| 7 * This program is free software: you can redistribute it and/or | |
| 8 * modify it under the terms of the GNU General Public License as | |
| 9 * published by the Free Software Foundation, either version 3 of the | |
| 10 * License, or (at your option) any later version. | |
| 11 * | |
| 12 * In addition, as a special exception, the copyright holders of this | |
| 13 * program give permission to link the code of its release with the | |
| 14 * OpenSSL project's "OpenSSL" library (or with modified versions of it | |
| 15 * that use the same license as the "OpenSSL" library), and distribute | |
| 16 * the linked executables. You must obey the GNU General Public License | |
| 17 * in all respects for all of the code used other than "OpenSSL". If you | |
| 18 * modify file(s) with this exception, you may extend this exception to | |
| 19 * your version of the file(s), but you are not obligated to do so. If | |
| 20 * you do not wish to do so, delete this exception statement from your | |
| 21 * version. If you delete this exception statement from all source files | |
| 22 * in the program, then also delete it here. | |
| 23 * | |
| 24 * This program is distributed in the hope that it will be useful, but | |
| 25 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
| 27 * General Public License for more details. | |
| 28 * | |
| 29 * You should have received a copy of the GNU General Public License | |
| 30 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
| 31 **/ | |
| 32 | |
| 33 | |
| 34 #include "OrthancWebDav.h" | |
| 35 | |
| 36 #include "../../OrthancFramework/Sources/DicomFormat/DicomArray.h" | |
| 37 #include "../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" | |
| 38 #include "../../OrthancFramework/Sources/HttpServer/WebDavStorage.h" | |
| 39 #include "Search/DatabaseLookup.h" | |
| 40 #include "ServerContext.h" | |
| 41 | |
| 42 #include <boost/regex.hpp> | |
| 43 #include <boost/algorithm/string/predicate.hpp> | |
| 44 | |
| 45 | |
| 46 static const char* const BY_PATIENTS = "by-patients"; | |
| 47 static const char* const BY_STUDIES = "by-studies"; | |
| 4241 | 48 static const char* const BY_DATES = "by-dates"; |
| 4240 | 49 static const char* const BY_UIDS = "by-uids"; |
| 50 static const char* const UPLOADS = "uploads"; | |
| 51 static const char* const MAIN_DICOM_TAGS = "MainDicomTags"; | |
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52 static const char* const STUDY_INFO = "study.json"; |
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53 static const char* const SERIES_INFO = "series.json"; |
| 4240 | 54 |
| 55 | |
| 56 namespace Orthanc | |
| 57 { | |
| 58 static boost::posix_time::ptime GetNow() | |
| 59 { | |
| 60 return boost::posix_time::second_clock::universal_time(); | |
| 61 } | |
| 62 | |
| 63 | |
| 64 static void LookupTime(boost::posix_time::ptime& target, | |
| 65 ServerContext& context, | |
| 66 const std::string& publicId, | |
| 67 MetadataType metadata) | |
| 68 { | |
| 69 std::string value; | |
| 70 if (context.GetIndex().LookupMetadata(value, publicId, metadata)) | |
| 71 { | |
| 72 try | |
| 73 { | |
| 74 target = boost::posix_time::from_iso_string(value); | |
| 75 return; | |
| 76 } | |
| 77 catch (std::exception& e) | |
| 78 { | |
| 79 } | |
| 80 } | |
| 81 | |
| 82 target = GetNow(); | |
| 83 } | |
| 84 | |
| 85 | |
| 86 class OrthancWebDav::DicomIdentifiersVisitor : public ServerContext::ILookupVisitor | |
| 87 { | |
| 88 private: | |
| 89 ServerContext& context_; | |
| 90 bool isComplete_; | |
| 91 Collection& target_; | |
| 92 ResourceType level_; | |
| 93 | |
| 94 public: | |
| 95 DicomIdentifiersVisitor(ServerContext& context, | |
| 96 Collection& target, | |
| 97 ResourceType level) : | |
| 98 context_(context), | |
| 99 isComplete_(false), | |
| 100 target_(target), | |
| 101 level_(level) | |
| 102 { | |
| 103 } | |
| 104 | |
| 105 virtual bool IsDicomAsJsonNeeded() const ORTHANC_OVERRIDE | |
| 106 { | |
| 107 return false; // (*) | |
| 108 } | |
| 109 | |
| 110 virtual void MarkAsComplete() ORTHANC_OVERRIDE | |
| 111 { | |
| 112 isComplete_ = true; // TODO | |
| 113 } | |
| 114 | |
| 115 virtual void Visit(const std::string& publicId, | |
| 116 const std::string& instanceId /* unused */, | |
| 117 const DicomMap& mainDicomTags, | |
| 118 const Json::Value* dicomAsJson /* unused (*) */) ORTHANC_OVERRIDE | |
| 119 { | |
| 120 DicomTag tag(0, 0); | |
| 121 MetadataType timeMetadata; | |
| 122 | |
| 123 switch (level_) | |
| 124 { | |
| 125 case ResourceType_Study: | |
| 126 tag = DICOM_TAG_STUDY_INSTANCE_UID; | |
| 127 timeMetadata = MetadataType_LastUpdate; | |
| 128 break; | |
| 129 | |
| 130 case ResourceType_Series: | |
| 131 tag = DICOM_TAG_SERIES_INSTANCE_UID; | |
| 132 timeMetadata = MetadataType_LastUpdate; | |
| 133 break; | |
| 134 | |
| 135 case ResourceType_Instance: | |
| 136 tag = DICOM_TAG_SOP_INSTANCE_UID; | |
| 137 timeMetadata = MetadataType_Instance_ReceptionDate; | |
| 138 break; | |
| 139 | |
| 140 default: | |
| 141 throw OrthancException(ErrorCode_InternalError); | |
| 142 } | |
| 143 | |
| 144 std::string s; | |
| 145 if (mainDicomTags.LookupStringValue(s, tag, false) && | |
| 146 !s.empty()) | |
| 147 { | |
| 148 std::unique_ptr<Resource> resource; | |
| 149 | |
| 150 if (level_ == ResourceType_Instance) | |
| 151 { | |
| 152 FileInfo info; | |
| 153 if (context_.GetIndex().LookupAttachment(info, publicId, FileContentType_Dicom)) | |
| 154 { | |
| 155 std::unique_ptr<File> f(new File(s + ".dcm")); | |
| 156 f->SetMimeType(MimeType_Dicom); | |
| 157 f->SetContentLength(info.GetUncompressedSize()); | |
| 158 resource.reset(f.release()); | |
| 159 } | |
| 160 } | |
| 161 else | |
| 162 { | |
| 163 resource.reset(new Folder(s)); | |
| 164 } | |
| 165 | |
| 166 if (resource.get() != NULL) | |
| 167 { | |
| 168 boost::posix_time::ptime t; | |
| 169 LookupTime(t, context_, publicId, timeMetadata); | |
| 170 resource->SetCreationTime(t); | |
| 171 target_.AddResource(resource.release()); | |
| 172 } | |
| 173 } | |
| 174 } | |
| 175 }; | |
| 176 | |
| 177 | |
| 178 class OrthancWebDav::DicomFileVisitor : public ServerContext::ILookupVisitor | |
| 179 { | |
| 180 private: | |
| 181 ServerContext& context_; | |
| 182 bool success_; | |
| 183 std::string& target_; | |
| 184 boost::posix_time::ptime& time_; | |
| 185 | |
| 186 public: | |
| 187 DicomFileVisitor(ServerContext& context, | |
| 188 std::string& target, | |
| 189 boost::posix_time::ptime& time) : | |
| 190 context_(context), | |
| 191 success_(false), | |
| 192 target_(target), | |
| 193 time_(time) | |
| 194 { | |
| 195 } | |
| 196 | |
| 197 bool IsSuccess() const | |
| 198 { | |
| 199 return success_; | |
| 200 } | |
| 201 | |
| 202 virtual bool IsDicomAsJsonNeeded() const ORTHANC_OVERRIDE | |
| 203 { | |
| 204 return false; // (*) | |
| 205 } | |
| 206 | |
| 207 virtual void MarkAsComplete() ORTHANC_OVERRIDE | |
| 208 { | |
| 209 } | |
| 210 | |
| 211 virtual void Visit(const std::string& publicId, | |
| 212 const std::string& instanceId /* unused */, | |
| 213 const DicomMap& mainDicomTags, | |
| 214 const Json::Value* dicomAsJson /* unused (*) */) ORTHANC_OVERRIDE | |
| 215 { | |
| 216 if (success_) | |
| 217 { | |
| 218 success_ = false; // Two matches => Error | |
| 219 } | |
| 220 else | |
| 221 { | |
| 222 LookupTime(time_, context_, publicId, MetadataType_Instance_ReceptionDate); | |
| 223 context_.ReadDicom(target_, publicId); | |
| 224 success_ = true; | |
| 225 } | |
| 226 } | |
| 227 }; | |
| 228 | |
| 229 | |
| 230 class OrthancWebDav::OrthancJsonVisitor : public ServerContext::ILookupVisitor | |
| 231 { | |
| 232 private: | |
| 233 ServerContext& context_; | |
| 234 bool success_; | |
| 235 std::string& target_; | |
| 236 ResourceType level_; | |
| 237 | |
| 238 public: | |
| 239 OrthancJsonVisitor(ServerContext& context, | |
| 240 std::string& target, | |
| 241 ResourceType level) : | |
| 242 context_(context), | |
| 243 success_(false), | |
| 244 target_(target), | |
| 245 level_(level) | |
| 246 { | |
| 247 } | |
| 248 | |
| 249 bool IsSuccess() const | |
| 250 { | |
| 251 return success_; | |
| 252 } | |
| 253 | |
| 254 virtual bool IsDicomAsJsonNeeded() const ORTHANC_OVERRIDE | |
| 255 { | |
| 256 return false; // (*) | |
| 257 } | |
| 258 | |
| 259 virtual void MarkAsComplete() ORTHANC_OVERRIDE | |
| 260 { | |
| 261 } | |
| 262 | |
| 263 virtual void Visit(const std::string& publicId, | |
| 264 const std::string& instanceId /* unused */, | |
| 265 const DicomMap& mainDicomTags, | |
| 266 const Json::Value* dicomAsJson /* unused (*) */) ORTHANC_OVERRIDE | |
| 267 { | |
| 268 Json::Value info; | |
| 269 if (context_.GetIndex().LookupResource(info, publicId, level_)) | |
| 270 { | |
| 271 if (success_) | |
| 272 { | |
| 273 success_ = false; // Two matches => Error | |
| 274 } | |
| 275 else | |
| 276 { | |
| 277 target_ = info.toStyledString(); | |
| 278 | |
| 279 // Replace UNIX newlines with DOS newlines | |
| 280 boost::replace_all(target_, "\n", "\r\n"); | |
| 281 | |
| 282 success_ = true; | |
| 283 } | |
| 284 } | |
| 285 } | |
| 286 }; | |
| 287 | |
| 288 | |
| 289 class OrthancWebDav::ResourcesIndex : public boost::noncopyable | |
| 290 { | |
| 291 public: | |
| 292 typedef std::map<std::string, std::string> Map; | |
| 293 | |
| 294 private: | |
| 295 ServerContext& context_; | |
| 296 ResourceType level_; | |
| 297 std::string template_; | |
| 298 Map pathToResource_; | |
| 299 Map resourceToPath_; | |
| 300 | |
| 301 void CheckInvariants() | |
| 302 { | |
| 303 #ifndef NDEBUG | |
| 304 assert(pathToResource_.size() == resourceToPath_.size()); | |
| 305 | |
| 306 for (Map::const_iterator it = pathToResource_.begin(); it != pathToResource_.end(); ++it) | |
| 307 { | |
| 308 assert(resourceToPath_[it->second] == it->first); | |
| 309 } | |
| 310 | |
| 311 for (Map::const_iterator it = resourceToPath_.begin(); it != resourceToPath_.end(); ++it) | |
| 312 { | |
| 313 assert(pathToResource_[it->second] == it->first); | |
| 314 } | |
| 315 #endif | |
| 316 } | |
| 317 | |
| 318 void AddTags(DicomMap& target, | |
| 319 const std::string& resourceId, | |
| 320 ResourceType tagsFromLevel) | |
| 321 { | |
| 322 DicomMap tags; | |
| 323 if (context_.GetIndex().GetMainDicomTags(tags, resourceId, level_, tagsFromLevel)) | |
| 324 { | |
| 325 target.Merge(tags); | |
| 326 } | |
| 327 } | |
| 328 | |
| 329 void Register(const std::string& resourceId) | |
| 330 { | |
| 331 // Don't register twice the same resource | |
| 332 if (resourceToPath_.find(resourceId) == resourceToPath_.end()) | |
| 333 { | |
| 334 std::string name = template_; | |
| 335 | |
| 336 DicomMap tags; | |
| 337 | |
| 338 AddTags(tags, resourceId, level_); | |
| 339 | |
| 340 if (level_ == ResourceType_Study) | |
| 341 { | |
| 342 AddTags(tags, resourceId, ResourceType_Patient); | |
| 343 } | |
| 344 | |
| 345 DicomArray arr(tags); | |
| 346 for (size_t i = 0; i < arr.GetSize(); i++) | |
| 347 { | |
| 348 const DicomElement& element = arr.GetElement(i); | |
| 349 if (!element.GetValue().IsNull() && | |
| 350 !element.GetValue().IsBinary()) | |
| 351 { | |
| 352 const std::string tag = FromDcmtkBridge::GetTagName(element.GetTag(), ""); | |
| 353 boost::replace_all(name, "{{" + tag + "}}", element.GetValue().GetContent()); | |
| 354 } | |
| 355 } | |
| 356 | |
| 357 // Blank the tags that were not matched | |
| 358 static const boost::regex REGEX_BLANK_TAGS("{{.*?}}"); // non-greedy match | |
| 359 name = boost::regex_replace(name, REGEX_BLANK_TAGS, ""); | |
| 360 | |
| 361 // UTF-8 characters cannot be used on Windows XP | |
| 362 name = Toolbox::ConvertToAscii(name); | |
| 363 boost::replace_all(name, "/", ""); | |
| 364 boost::replace_all(name, "\\", ""); | |
| 365 | |
| 366 // Trim sequences of spaces as one single space | |
| 367 static const boost::regex REGEX_TRIM_SPACES("{{.*?}}"); | |
| 368 name = boost::regex_replace(name, REGEX_TRIM_SPACES, " "); | |
| 369 name = Toolbox::StripSpaces(name); | |
| 370 | |
| 371 size_t count = 0; | |
| 372 for (;;) | |
| 373 { | |
| 374 std::string path = name; | |
| 375 if (count > 0) | |
| 376 { | |
| 377 path += " (" + boost::lexical_cast<std::string>(count) + ")"; | |
| 378 } | |
| 379 | |
| 380 if (pathToResource_.find(path) == pathToResource_.end()) | |
| 381 { | |
| 382 pathToResource_[path] = resourceId; | |
| 383 resourceToPath_[resourceId] = path; | |
| 384 return; | |
| 385 } | |
| 386 | |
| 387 count++; | |
| 388 } | |
| 389 | |
| 390 throw OrthancException(ErrorCode_InternalError); | |
| 391 } | |
| 392 } | |
| 393 | |
| 394 public: | |
| 395 ResourcesIndex(ServerContext& context, | |
| 396 ResourceType level, | |
| 397 const std::string& templateString) : | |
| 398 context_(context), | |
| 399 level_(level), | |
| 400 template_(templateString) | |
| 401 { | |
| 402 } | |
| 403 | |
| 404 ResourceType GetLevel() const | |
| 405 { | |
| 406 return level_; | |
| 407 } | |
| 408 | |
| 409 void Refresh(std::set<std::string>& removedPaths /* out */, | |
| 410 const std::set<std::string>& resources) | |
| 411 { | |
| 412 CheckInvariants(); | |
| 413 | |
| 414 // Detect the resources that have been removed since last refresh | |
| 415 removedPaths.clear(); | |
| 416 std::set<std::string> removedResources; | |
| 417 | |
| 418 for (Map::iterator it = resourceToPath_.begin(); it != resourceToPath_.end(); ++it) | |
| 419 { | |
| 420 if (resources.find(it->first) == resources.end()) | |
| 421 { | |
| 422 const std::string& path = it->second; | |
| 423 | |
| 424 assert(pathToResource_.find(path) != pathToResource_.end()); | |
| 425 pathToResource_.erase(path); | |
| 426 removedPaths.insert(path); | |
| 427 | |
| 428 removedResources.insert(it->first); // Delay the removal to avoid disturbing the iterator | |
| 429 } | |
| 430 } | |
| 431 | |
| 432 // Remove the missing resources | |
| 433 for (std::set<std::string>::const_iterator it = removedResources.begin(); it != removedResources.end(); ++it) | |
| 434 { | |
| 435 assert(resourceToPath_.find(*it) != resourceToPath_.end()); | |
| 436 resourceToPath_.erase(*it); | |
| 437 } | |
| 438 | |
| 439 CheckInvariants(); | |
| 440 | |
| 441 for (std::set<std::string>::const_iterator it = resources.begin(); it != resources.end(); ++it) | |
| 442 { | |
| 443 Register(*it); | |
| 444 } | |
| 445 | |
| 446 CheckInvariants(); | |
| 447 } | |
| 448 | |
| 449 const Map& GetPathToResource() const | |
| 450 { | |
| 451 return pathToResource_; | |
| 452 } | |
| 453 }; | |
| 454 | |
| 455 | |
| 456 class OrthancWebDav::InstancesOfSeries : public INode | |
| 457 { | |
| 458 private: | |
| 459 ServerContext& context_; | |
| 460 std::string parentSeries_; | |
| 461 | |
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462 static bool LookupInstanceId(std::string& instanceId, |
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463 const UriComponents& path) |
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464 { |
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465 if (path.size() == 1 && |
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466 boost::ends_with(path[0], ".dcm")) |
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467 { |
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468 instanceId = path[0].substr(0, path[0].size() - 4); |
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469 return true; |
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470 } |
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471 else |
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472 { |
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473 return false; |
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474 } |
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475 } |
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476 |
| 4240 | 477 public: |
| 478 InstancesOfSeries(ServerContext& context, | |
| 479 const std::string& parentSeries) : | |
| 480 context_(context), | |
| 481 parentSeries_(parentSeries) | |
| 482 { | |
| 483 } | |
| 484 | |
| 485 virtual bool ListCollection(IWebDavBucket::Collection& target, | |
| 486 const UriComponents& path) ORTHANC_OVERRIDE | |
| 487 { | |
| 488 if (path.empty()) | |
| 489 { | |
| 490 std::list<std::string> resources; | |
| 491 try | |
| 492 { | |
| 493 context_.GetIndex().GetChildren(resources, parentSeries_); | |
| 494 } | |
| 495 catch (OrthancException&) | |
| 496 { | |
| 497 // Unknown (or deleted) parent series | |
| 498 return false; | |
| 499 } | |
| 500 | |
| 501 for (std::list<std::string>::const_iterator | |
| 502 it = resources.begin(); it != resources.end(); ++it) | |
| 503 { | |
| 504 boost::posix_time::ptime time; | |
| 505 LookupTime(time, context_, *it, MetadataType_Instance_ReceptionDate); | |
| 506 | |
| 507 FileInfo info; | |
| 508 if (context_.GetIndex().LookupAttachment(info, *it, FileContentType_Dicom)) | |
| 509 { | |
| 510 std::unique_ptr<File> resource(new File(*it + ".dcm")); | |
| 511 resource->SetMimeType(MimeType_Dicom); | |
| 512 resource->SetContentLength(info.GetUncompressedSize()); | |
| 513 resource->SetCreationTime(time); | |
| 514 target.AddResource(resource.release()); | |
| 515 } | |
| 516 } | |
| 517 | |
| 518 return true; | |
| 519 } | |
| 520 else | |
| 521 { | |
| 522 return false; | |
| 523 } | |
| 524 } | |
| 525 | |
| 526 virtual bool GetFileContent(MimeType& mime, | |
| 527 std::string& content, | |
| 528 boost::posix_time::ptime& time, | |
| 529 const UriComponents& path) ORTHANC_OVERRIDE | |
| 530 { | |
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531 std::string instanceId; |
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532 if (LookupInstanceId(instanceId, path)) |
| 4240 | 533 { |
| 534 try | |
| 535 { | |
| 536 mime = MimeType_Dicom; | |
| 537 context_.ReadDicom(content, instanceId); | |
| 538 LookupTime(time, context_, instanceId, MetadataType_Instance_ReceptionDate); | |
| 539 return true; | |
| 540 } | |
| 541 catch (OrthancException&) | |
| 542 { | |
| 543 // File was removed | |
| 544 return false; | |
| 545 } | |
| 546 } | |
| 547 else | |
| 548 { | |
| 549 return false; | |
| 550 } | |
| 551 } | |
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552 |
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553 virtual bool DeleteItem(const UriComponents& path) ORTHANC_OVERRIDE |
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554 { |
| 4252 | 555 if (path.empty()) |
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556 { |
| 4252 | 557 // Delete all |
| 558 std::list<std::string> resources; | |
| 559 try | |
| 560 { | |
| 561 context_.GetIndex().GetChildren(resources, parentSeries_); | |
| 562 } | |
| 563 catch (OrthancException&) | |
| 564 { | |
| 565 // Unknown (or deleted) parent series | |
| 566 return true; | |
| 567 } | |
| 568 | |
| 569 for (std::list<std::string>::const_iterator it = resources.begin(); | |
| 570 it != resources.end(); ++it) | |
| 571 { | |
| 572 Json::Value info; | |
| 573 context_.DeleteResource(info, *it, ResourceType_Instance); | |
| 574 } | |
| 575 | |
| 576 return true; | |
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577 } |
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578 else |
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579 { |
| 4252 | 580 std::string instanceId; |
| 581 if (LookupInstanceId(instanceId, path)) | |
| 582 { | |
| 583 Json::Value info; | |
| 584 return context_.DeleteResource(info, instanceId, ResourceType_Instance); | |
| 585 } | |
| 586 else | |
| 587 { | |
| 588 return false; | |
| 589 } | |
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590 } |
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591 } |
| 4240 | 592 }; |
| 593 | |
| 594 | |
| 595 | |
| 596 /** | |
| 597 * The "InternalNode" class corresponds to a non-leaf node in the | |
| 598 * WebDAV tree, that only contains subfolders (no file). | |
| 599 * | |
| 600 * TODO: Implement a LRU index to dynamically remove the oldest | |
| 601 * children on high RAM usage. | |
| 602 **/ | |
| 603 class OrthancWebDav::InternalNode : public INode | |
| 604 { | |
| 605 private: | |
| 606 typedef std::map<std::string, INode*> Children; | |
| 607 | |
| 608 Children children_; | |
| 609 | |
| 610 INode* GetChild(const std::string& path) // Don't delete the result pointer! | |
| 611 { | |
| 612 Children::const_iterator child = children_.find(path); | |
| 613 if (child == children_.end()) | |
| 614 { | |
| 4253 | 615 INode* node = CreateSubfolder(path); |
| 4240 | 616 |
| 4253 | 617 if (node == NULL) |
| 4240 | 618 { |
| 619 return NULL; | |
| 620 } | |
| 621 else | |
| 622 { | |
| 4253 | 623 children_[path] = node; |
| 624 return node; | |
| 4240 | 625 } |
| 626 } | |
| 627 else | |
| 628 { | |
| 629 assert(child->second != NULL); | |
| 630 return child->second; | |
| 631 } | |
| 632 } | |
| 633 | |
| 634 protected: | |
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635 void InvalidateSubfolder(const std::string& path) |
| 4240 | 636 { |
| 637 Children::iterator child = children_.find(path); | |
| 638 if (child != children_.end()) | |
| 639 { | |
| 640 assert(child->second != NULL); | |
| 641 delete child->second; | |
| 642 children_.erase(child); | |
| 643 } | |
| 644 } | |
| 645 | |
| 646 virtual void Refresh() = 0; | |
| 647 | |
| 648 virtual bool ListSubfolders(IWebDavBucket::Collection& target) = 0; | |
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649 |
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650 virtual INode* CreateSubfolder(const std::string& path) = 0; |
| 4240 | 651 |
| 652 public: | |
| 653 virtual ~InternalNode() | |
| 654 { | |
| 655 for (Children::iterator it = children_.begin(); it != children_.end(); ++it) | |
| 656 { | |
| 657 assert(it->second != NULL); | |
| 658 delete it->second; | |
| 659 } | |
| 660 } | |
| 661 | |
| 662 virtual bool ListCollection(IWebDavBucket::Collection& target, | |
| 663 const UriComponents& path) | |
| 664 ORTHANC_OVERRIDE ORTHANC_FINAL | |
| 665 { | |
| 666 Refresh(); | |
| 667 | |
| 668 if (path.empty()) | |
| 669 { | |
| 670 return ListSubfolders(target); | |
| 671 } | |
| 672 else | |
| 673 { | |
| 674 // Recursivity | |
| 675 INode* child = GetChild(path[0]); | |
| 676 if (child == NULL) | |
| 677 { | |
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678 // Must be "true" to allow DELETE on folders that are |
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679 // automatically removed through recursive deletion |
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680 return true; |
| 4240 | 681 } |
| 682 else | |
| 683 { | |
| 684 UriComponents subpath(path.begin() + 1, path.end()); | |
| 685 return child->ListCollection(target, subpath); | |
| 686 } | |
| 687 } | |
| 688 } | |
| 689 | |
| 690 virtual bool GetFileContent(MimeType& mime, | |
| 691 std::string& content, | |
| 692 boost::posix_time::ptime& time, | |
| 693 const UriComponents& path) | |
| 694 ORTHANC_OVERRIDE ORTHANC_FINAL | |
| 695 { | |
| 696 if (path.empty()) | |
| 697 { | |
| 698 return false; // An internal node doesn't correspond to a file | |
| 699 } | |
| 700 else | |
| 701 { | |
| 702 // Recursivity | |
| 703 Refresh(); | |
| 704 | |
| 705 INode* child = GetChild(path[0]); | |
| 706 if (child == NULL) | |
| 707 { | |
| 708 return false; | |
| 709 } | |
| 710 else | |
| 711 { | |
| 712 UriComponents subpath(path.begin() + 1, path.end()); | |
| 713 return child->GetFileContent(mime, content, time, subpath); | |
| 714 } | |
| 715 } | |
| 716 } | |
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717 |
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718 |
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719 virtual bool DeleteItem(const UriComponents& path) ORTHANC_OVERRIDE ORTHANC_FINAL |
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720 { |
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721 Refresh(); |
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722 |
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723 if (path.empty()) |
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724 { |
| 4252 | 725 IWebDavBucket::Collection collection; |
| 726 if (ListSubfolders(collection)) | |
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727 { |
| 4252 | 728 std::set<std::string> content; |
| 729 collection.ListDisplayNames(content); | |
| 730 | |
| 731 for (std::set<std::string>::const_iterator | |
| 732 it = content.begin(); it != content.end(); ++it) | |
| 733 { | |
| 734 INode* node = GetChild(*it); | |
| 735 if (node) | |
| 736 { | |
| 737 node->DeleteItem(path); | |
| 738 } | |
| 739 } | |
| 740 | |
| 741 return true; | |
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742 } |
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743 else |
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744 { |
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745 return false; |
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746 } |
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747 } |
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748 else |
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749 { |
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750 INode* child = GetChild(path[0]); |
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751 if (child == NULL) |
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752 { |
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753 return true; |
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754 } |
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755 else |
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756 { |
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757 // Recursivity |
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758 UriComponents subpath(path.begin() + 1, path.end()); |
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759 return child->DeleteItem(subpath); |
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760 } |
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761 } |
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762 } |
| 4240 | 763 }; |
| 764 | |
| 765 | |
| 766 class OrthancWebDav::ListOfResources : public InternalNode | |
| 767 { | |
| 768 private: | |
| 769 ServerContext& context_; | |
| 770 const Templates& templates_; | |
| 771 std::unique_ptr<ResourcesIndex> index_; | |
| 772 MetadataType timeMetadata_; | |
| 773 | |
| 774 protected: | |
| 775 virtual void Refresh() ORTHANC_OVERRIDE ORTHANC_FINAL | |
| 776 { | |
| 777 std::list<std::string> resources; | |
| 778 GetCurrentResources(resources); | |
| 779 | |
| 780 std::set<std::string> removedPaths; | |
| 781 index_->Refresh(removedPaths, std::set<std::string>(resources.begin(), resources.end())); | |
| 782 | |
| 783 // Remove the children whose associated resource doesn't exist anymore | |
| 784 for (std::set<std::string>::const_iterator | |
| 785 it = removedPaths.begin(); it != removedPaths.end(); ++it) | |
| 786 { | |
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787 InvalidateSubfolder(*it); |
| 4240 | 788 } |
| 789 } | |
| 790 | |
| 791 virtual bool ListSubfolders(IWebDavBucket::Collection& target) ORTHANC_OVERRIDE ORTHANC_FINAL | |
| 792 { | |
| 793 if (index_->GetLevel() == ResourceType_Instance) | |
| 794 { | |
| 795 // Not a collection, no subfolders | |
| 796 return false; | |
| 797 } | |
| 798 else | |
| 799 { | |
| 800 const ResourcesIndex::Map& paths = index_->GetPathToResource(); | |
| 801 | |
| 802 for (ResourcesIndex::Map::const_iterator it = paths.begin(); it != paths.end(); ++it) | |
| 803 { | |
| 804 boost::posix_time::ptime time; | |
| 805 LookupTime(time, context_, it->second, timeMetadata_); | |
| 806 | |
| 807 std::unique_ptr<IWebDavBucket::Resource> resource(new IWebDavBucket::Folder(it->first)); | |
| 808 resource->SetCreationTime(time); | |
| 809 target.AddResource(resource.release()); | |
| 810 } | |
| 811 | |
| 812 return true; | |
| 813 } | |
| 814 } | |
| 815 | |
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816 virtual INode* CreateSubfolder(const std::string& path) ORTHANC_OVERRIDE ORTHANC_FINAL |
| 4240 | 817 { |
| 818 ResourcesIndex::Map::const_iterator resource = index_->GetPathToResource().find(path); | |
| 819 if (resource == index_->GetPathToResource().end()) | |
| 820 { | |
| 821 return NULL; | |
| 822 } | |
| 823 else | |
| 824 { | |
| 825 return CreateResourceNode(resource->second); | |
| 826 } | |
| 827 } | |
| 828 | |
| 829 ServerContext& GetContext() const | |
| 830 { | |
| 831 return context_; | |
| 832 } | |
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833 |
| 4240 | 834 virtual void GetCurrentResources(std::list<std::string>& resources) = 0; |
| 835 | |
| 836 virtual INode* CreateResourceNode(const std::string& resource) = 0; | |
| 837 | |
| 838 public: | |
| 839 ListOfResources(ServerContext& context, | |
| 840 ResourceType level, | |
| 841 const Templates& templates) : | |
| 842 context_(context), | |
| 843 templates_(templates) | |
| 844 { | |
| 845 Templates::const_iterator t = templates.find(level); | |
| 846 if (t == templates.end()) | |
| 847 { | |
| 848 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
| 849 } | |
| 850 | |
| 851 index_.reset(new ResourcesIndex(context, level, t->second)); | |
| 852 | |
| 853 if (level == ResourceType_Instance) | |
| 854 { | |
| 855 timeMetadata_ = MetadataType_Instance_ReceptionDate; | |
| 856 } | |
| 857 else | |
| 858 { | |
| 859 timeMetadata_ = MetadataType_LastUpdate; | |
| 860 } | |
| 861 } | |
| 862 | |
| 863 ResourceType GetLevel() const | |
| 864 { | |
| 865 return index_->GetLevel(); | |
| 866 } | |
| 867 | |
| 868 const Templates& GetTemplates() const | |
| 869 { | |
| 870 return templates_; | |
| 871 } | |
| 872 }; | |
| 873 | |
| 874 | |
| 875 | |
| 876 class OrthancWebDav::SingleDicomResource : public ListOfResources | |
| 877 { | |
| 878 private: | |
| 879 std::string parentId_; | |
| 880 | |
| 881 protected: | |
| 882 virtual void GetCurrentResources(std::list<std::string>& resources) ORTHANC_OVERRIDE | |
| 883 { | |
| 884 try | |
| 885 { | |
| 886 GetContext().GetIndex().GetChildren(resources, parentId_); | |
| 887 } | |
| 888 catch (OrthancException&) | |
| 889 { | |
| 890 // Unknown parent resource | |
| 891 resources.clear(); | |
| 892 } | |
| 893 } | |
| 894 | |
| 895 virtual INode* CreateResourceNode(const std::string& resource) ORTHANC_OVERRIDE | |
| 896 { | |
| 897 if (GetLevel() == ResourceType_Instance) | |
| 898 { | |
| 899 return NULL; | |
| 900 } | |
| 901 else if (GetLevel() == ResourceType_Series) | |
| 902 { | |
| 903 return new InstancesOfSeries(GetContext(), resource); | |
| 904 } | |
| 905 else | |
| 906 { | |
| 907 ResourceType l = GetChildResourceType(GetLevel()); | |
| 908 return new SingleDicomResource(GetContext(), l, resource, GetTemplates()); | |
| 909 } | |
| 910 } | |
| 911 | |
| 912 public: | |
| 913 SingleDicomResource(ServerContext& context, | |
| 914 ResourceType level, | |
| 915 const std::string& parentId, | |
| 916 const Templates& templates) : | |
| 917 ListOfResources(context, level, templates), | |
| 918 parentId_(parentId) | |
| 919 { | |
| 920 } | |
| 921 }; | |
| 922 | |
| 923 | |
| 924 class OrthancWebDav::RootNode : public ListOfResources | |
| 925 { | |
| 926 protected: | |
| 927 virtual void GetCurrentResources(std::list<std::string>& resources) ORTHANC_OVERRIDE | |
| 928 { | |
| 929 GetContext().GetIndex().GetAllUuids(resources, GetLevel()); | |
| 930 } | |
| 931 | |
| 932 virtual INode* CreateResourceNode(const std::string& resource) ORTHANC_OVERRIDE | |
| 933 { | |
| 934 if (GetLevel() == ResourceType_Series) | |
| 935 { | |
| 936 return new InstancesOfSeries(GetContext(), resource); | |
| 937 } | |
| 938 else | |
| 939 { | |
| 940 ResourceType l = GetChildResourceType(GetLevel()); | |
| 941 return new SingleDicomResource(GetContext(), l, resource, GetTemplates()); | |
| 942 } | |
| 943 } | |
| 944 | |
| 945 public: | |
| 946 RootNode(ServerContext& context, | |
| 947 ResourceType level, | |
| 948 const Templates& templates) : | |
| 949 ListOfResources(context, level, templates) | |
| 950 { | |
| 951 } | |
| 952 }; | |
| 953 | |
| 954 | |
| 955 class OrthancWebDav::ListOfStudiesByDate : public ListOfResources | |
| 956 { | |
| 957 private: | |
| 958 std::string year_; | |
| 959 std::string month_; | |
| 960 | |
| 961 class Visitor : public ServerContext::ILookupVisitor | |
| 962 { | |
| 963 private: | |
| 964 std::list<std::string>& resources_; | |
| 965 | |
| 966 public: | |
| 4253 | 967 explicit Visitor(std::list<std::string>& resources) : |
| 4240 | 968 resources_(resources) |
| 969 { | |
| 970 } | |
| 971 | |
| 972 virtual bool IsDicomAsJsonNeeded() const ORTHANC_OVERRIDE | |
| 973 { | |
| 974 return false; // (*) | |
| 975 } | |
| 976 | |
| 977 virtual void MarkAsComplete() ORTHANC_OVERRIDE | |
| 978 { | |
| 979 } | |
| 980 | |
| 981 virtual void Visit(const std::string& publicId, | |
| 982 const std::string& instanceId /* unused */, | |
| 983 const DicomMap& mainDicomTags, | |
| 984 const Json::Value* dicomAsJson /* unused (*) */) ORTHANC_OVERRIDE | |
| 985 { | |
| 986 resources_.push_back(publicId); | |
| 987 } | |
| 988 }; | |
| 989 | |
| 990 protected: | |
| 991 virtual void GetCurrentResources(std::list<std::string>& resources) ORTHANC_OVERRIDE | |
| 992 { | |
| 993 DatabaseLookup query; | |
| 994 query.AddRestConstraint(DICOM_TAG_STUDY_DATE, year_ + month_ + "01-" + year_ + month_ + "31", | |
| 995 true /* case sensitive */, true /* mandatory tag */); | |
| 996 | |
| 997 Visitor visitor(resources); | |
| 998 GetContext().Apply(visitor, query, ResourceType_Study, 0 /* since */, 0 /* no limit */); | |
| 999 } | |
| 1000 | |
| 1001 virtual INode* CreateResourceNode(const std::string& resource) ORTHANC_OVERRIDE | |
| 1002 { | |
| 1003 return new SingleDicomResource(GetContext(), ResourceType_Series, resource, GetTemplates()); | |
| 1004 } | |
| 1005 | |
| 1006 public: | |
| 1007 ListOfStudiesByDate(ServerContext& context, | |
| 1008 const std::string& year, | |
| 1009 const std::string& month, | |
| 1010 const Templates& templates) : | |
| 1011 ListOfResources(context, ResourceType_Study, templates), | |
| 1012 year_(year), | |
| 1013 month_(month) | |
| 1014 { | |
| 1015 if (year.size() != 4 || | |
| 1016 month.size() != 2) | |
| 1017 { | |
| 1018 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
| 1019 } | |
| 1020 } | |
| 1021 }; | |
| 1022 | |
| 1023 | |
| 1024 class OrthancWebDav::ListOfStudiesByMonth : public InternalNode | |
| 1025 { | |
| 1026 private: | |
| 1027 ServerContext& context_; | |
| 1028 std::string year_; | |
| 1029 const Templates& templates_; | |
| 1030 | |
| 1031 class Visitor : public ServerContext::ILookupVisitor | |
| 1032 { | |
| 1033 private: | |
| 1034 std::set<std::string> months_; | |
| 1035 | |
| 1036 public: | |
| 1037 const std::set<std::string>& GetMonths() const | |
| 1038 { | |
| 1039 return months_; | |
| 1040 } | |
| 1041 | |
| 1042 virtual bool IsDicomAsJsonNeeded() const ORTHANC_OVERRIDE | |
| 1043 { | |
| 1044 return false; // (*) | |
| 1045 } | |
| 1046 | |
| 1047 virtual void MarkAsComplete() ORTHANC_OVERRIDE | |
| 1048 { | |
| 1049 } | |
| 1050 | |
| 1051 virtual void Visit(const std::string& publicId, | |
| 1052 const std::string& instanceId /* unused */, | |
| 1053 const DicomMap& mainDicomTags, | |
| 1054 const Json::Value* dicomAsJson /* unused (*) */) ORTHANC_OVERRIDE | |
| 1055 { | |
| 1056 std::string s; | |
| 1057 if (mainDicomTags.LookupStringValue(s, DICOM_TAG_STUDY_DATE, false) && | |
| 1058 s.size() == 8) | |
| 1059 { | |
| 1060 months_.insert(s.substr(4, 2)); // Get the month from "YYYYMMDD" | |
| 1061 } | |
| 1062 } | |
| 1063 }; | |
| 1064 | |
| 1065 protected: | |
| 1066 virtual void Refresh() ORTHANC_OVERRIDE | |
| 1067 { | |
| 1068 } | |
| 1069 | |
| 1070 virtual bool ListSubfolders(IWebDavBucket::Collection& target) ORTHANC_OVERRIDE | |
| 1071 { | |
| 1072 DatabaseLookup query; | |
| 1073 query.AddRestConstraint(DICOM_TAG_STUDY_DATE, year_ + "0101-" + year_ + "1231", | |
| 1074 true /* case sensitive */, true /* mandatory tag */); | |
| 1075 | |
| 1076 Visitor visitor; | |
| 1077 context_.Apply(visitor, query, ResourceType_Study, 0 /* since */, 0 /* no limit */); | |
| 1078 | |
| 1079 for (std::set<std::string>::const_iterator it = visitor.GetMonths().begin(); | |
| 1080 it != visitor.GetMonths().end(); ++it) | |
| 1081 { | |
| 1082 target.AddResource(new IWebDavBucket::Folder(year_ + "-" + *it)); | |
| 1083 } | |
| 1084 | |
| 1085 return true; | |
| 1086 } | |
| 1087 | |
|
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1088 virtual INode* CreateSubfolder(const std::string& path) ORTHANC_OVERRIDE |
| 4240 | 1089 { |
| 1090 if (path.size() != 7) // Format: "YYYY-MM" | |
| 1091 { | |
| 1092 throw OrthancException(ErrorCode_InternalError); | |
| 1093 } | |
| 1094 else | |
| 1095 { | |
| 1096 const std::string year = path.substr(0, 4); | |
| 1097 const std::string month = path.substr(5, 2); | |
| 1098 return new ListOfStudiesByDate(context_, year, month, templates_); | |
| 1099 } | |
| 1100 } | |
| 1101 | |
| 1102 public: | |
| 1103 ListOfStudiesByMonth(ServerContext& context, | |
| 1104 const std::string& year, | |
| 1105 const Templates& templates) : | |
| 1106 context_(context), | |
| 1107 year_(year), | |
| 1108 templates_(templates) | |
| 1109 { | |
| 1110 if (year_.size() != 4) | |
| 1111 { | |
| 1112 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
| 1113 } | |
| 1114 } | |
| 1115 }; | |
| 1116 | |
| 1117 | |
| 1118 class OrthancWebDav::ListOfStudiesByYear : public InternalNode | |
| 1119 { | |
| 1120 private: | |
| 1121 ServerContext& context_; | |
| 1122 const Templates& templates_; | |
| 1123 | |
| 1124 protected: | |
| 1125 virtual void Refresh() ORTHANC_OVERRIDE | |
| 1126 { | |
| 1127 } | |
| 1128 | |
| 1129 virtual bool ListSubfolders(IWebDavBucket::Collection& target) ORTHANC_OVERRIDE | |
| 1130 { | |
| 1131 std::list<std::string> resources; | |
| 1132 context_.GetIndex().GetAllUuids(resources, ResourceType_Study); | |
| 1133 | |
| 1134 std::set<std::string> years; | |
| 1135 | |
| 1136 for (std::list<std::string>::const_iterator it = resources.begin(); it != resources.end(); ++it) | |
| 1137 { | |
| 1138 DicomMap tags; | |
| 1139 std::string studyDate; | |
| 1140 if (context_.GetIndex().GetMainDicomTags(tags, *it, ResourceType_Study, ResourceType_Study) && | |
| 1141 tags.LookupStringValue(studyDate, DICOM_TAG_STUDY_DATE, false) && | |
| 1142 studyDate.size() == 8) | |
| 1143 { | |
| 1144 years.insert(studyDate.substr(0, 4)); // Get the year from "YYYYMMDD" | |
| 1145 } | |
| 1146 } | |
| 1147 | |
| 1148 for (std::set<std::string>::const_iterator it = years.begin(); it != years.end(); ++it) | |
| 1149 { | |
| 1150 target.AddResource(new IWebDavBucket::Folder(*it)); | |
| 1151 } | |
| 1152 | |
| 1153 return true; | |
| 1154 } | |
| 1155 | |
|
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1156 virtual INode* CreateSubfolder(const std::string& path) ORTHANC_OVERRIDE |
| 4240 | 1157 { |
| 1158 return new ListOfStudiesByMonth(context_, path, templates_); | |
| 1159 } | |
| 1160 | |
| 1161 public: | |
| 1162 ListOfStudiesByYear(ServerContext& context, | |
| 1163 const Templates& templates) : | |
| 1164 context_(context), | |
| 1165 templates_(templates) | |
| 1166 { | |
| 1167 } | |
| 1168 }; | |
| 1169 | |
| 1170 | |
|
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1171 class OrthancWebDav::DicomDeleteVisitor : public ServerContext::ILookupVisitor |
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1172 { |
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1173 private: |
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1174 ServerContext& context_; |
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1175 ResourceType level_; |
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1176 |
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1177 public: |
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1178 DicomDeleteVisitor(ServerContext& context, |
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1179 ResourceType level) : |
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1180 context_(context), |
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1181 level_(level) |
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1182 { |
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1183 } |
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1184 |
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1185 virtual bool IsDicomAsJsonNeeded() const ORTHANC_OVERRIDE |
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1186 { |
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1187 return false; // (*) |
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1188 } |
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1189 |
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1190 virtual void MarkAsComplete() ORTHANC_OVERRIDE |
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1191 { |
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1192 } |
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1193 |
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1194 virtual void Visit(const std::string& publicId, |
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1195 const std::string& instanceId /* unused */, |
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1196 const DicomMap& mainDicomTags /* unused */, |
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1197 const Json::Value* dicomAsJson /* unused (*) */) ORTHANC_OVERRIDE |
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1198 { |
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1199 Json::Value info; |
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1200 context_.DeleteResource(info, publicId, level_); |
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1201 } |
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1202 }; |
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1203 |
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1204 |
| 4240 | 1205 void OrthancWebDav::AddVirtualFile(Collection& collection, |
| 1206 const UriComponents& path, | |
| 1207 const std::string& filename) | |
| 1208 { | |
| 1209 MimeType mime; | |
| 1210 std::string content; | |
| 4246 | 1211 boost::posix_time::ptime modification; // Unused, let the date be set to "GetNow()" |
| 4240 | 1212 |
| 1213 UriComponents p = path; | |
| 1214 p.push_back(filename); | |
| 1215 | |
| 1216 if (GetFileContent(mime, content, modification, p)) | |
| 1217 { | |
| 1218 std::unique_ptr<File> f(new File(filename)); | |
| 1219 f->SetMimeType(mime); | |
| 1220 f->SetContentLength(content.size()); | |
| 1221 collection.AddResource(f.release()); | |
| 1222 } | |
| 1223 } | |
| 1224 | |
| 1225 | |
| 1226 void OrthancWebDav::UploadWorker(OrthancWebDav* that) | |
| 1227 { | |
| 1228 assert(that != NULL); | |
| 1229 | |
| 1230 boost::posix_time::ptime lastModification = GetNow(); | |
| 1231 | |
|
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1232 while (that->uploadRunning_) |
| 4240 | 1233 { |
| 1234 std::unique_ptr<IDynamicObject> obj(that->uploadQueue_.Dequeue(100)); | |
| 1235 if (obj.get() != NULL) | |
| 1236 { | |
| 1237 that->Upload(reinterpret_cast<const SingleValueObject<std::string>&>(*obj).GetValue()); | |
| 1238 lastModification = GetNow(); | |
| 1239 } | |
|
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1240 else if (GetNow() - lastModification > boost::posix_time::seconds(30)) |
| 4240 | 1241 { |
|
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1242 /** |
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1243 * After every 30 seconds of inactivity, remove the empty |
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1244 * folders. This delay is needed to avoid removing |
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1245 * just-created folders before the remote WebDAV has time to |
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1246 * write files into it. |
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1247 **/ |
| 4240 | 1248 LOG(INFO) << "Cleaning up the empty WebDAV upload folders"; |
| 1249 that->uploads_.RemoveEmptyFolders(); | |
| 1250 lastModification = GetNow(); | |
| 1251 } | |
| 1252 } | |
| 1253 } | |
| 1254 | |
| 1255 | |
| 1256 void OrthancWebDav::Upload(const std::string& path) | |
| 1257 { | |
| 1258 UriComponents uri; | |
| 1259 Toolbox::SplitUriComponents(uri, path); | |
| 1260 | |
| 1261 LOG(INFO) << "Upload from WebDAV: " << path; | |
| 1262 | |
| 1263 MimeType mime; | |
| 1264 std::string content; | |
| 1265 boost::posix_time::ptime time; | |
| 1266 if (uploads_.GetFileContent(mime, content, time, uri)) | |
| 1267 { | |
| 1268 DicomInstanceToStore instance; | |
|
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1269 instance.SetOrigin(DicomInstanceOrigin::FromWebDav()); |
| 4240 | 1270 instance.SetBuffer(content.c_str(), content.size()); |
| 1271 | |
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1272 bool success = false; |
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1273 |
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1274 try |
| 4240 | 1275 { |
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1276 std::string publicId; |
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1277 StoreStatus status = context_.Store(publicId, instance, StoreInstanceMode_Default); |
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1278 if (status == StoreStatus_Success || |
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1279 status == StoreStatus_AlreadyStored) |
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1280 { |
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1281 LOG(INFO) << "Successfully imported DICOM instance from WebDAV: " |
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1282 << path << " (Orthanc ID: " << publicId << ")"; |
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1283 success = true; |
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1284 } |
| 4240 | 1285 } |
|
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1286 catch (OrthancException& e) |
| 4240 | 1287 { |
|
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1288 } |
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1289 |
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1290 uploads_.DeleteItem(uri); |
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1291 |
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1292 if (!success) |
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1293 { |
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1294 LOG(WARNING) << "Cannot import DICOM instance from WebWAV (maybe not a DICOM file): " << path; |
| 4240 | 1295 } |
| 1296 } | |
| 1297 } | |
| 1298 | |
| 1299 | |
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1300 OrthancWebDav::INode& OrthancWebDav::GetRootNode(const std::string& rootPath) |
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1301 { |
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1302 if (rootPath == BY_PATIENTS) |
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1303 { |
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1304 return *patients_; |
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1305 } |
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1306 else if (rootPath == BY_STUDIES) |
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1307 { |
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1308 return *studies_; |
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1309 } |
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1310 else if (rootPath == BY_DATES) |
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1311 { |
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1312 return *dates_; |
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1313 } |
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1314 else |
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1315 { |
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1316 throw OrthancException(ErrorCode_InternalError); |
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1317 } |
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1318 } |
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1319 |
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1320 |
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1321 OrthancWebDav::OrthancWebDav(ServerContext& context, |
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1322 bool allowDicomDelete, |
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1323 bool allowUpload) : |
| 4240 | 1324 context_(context), |
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1325 allowDicomDelete_(allowDicomDelete), |
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1326 allowUpload_(allowUpload), |
| 4240 | 1327 uploads_(false /* store uploads as temporary files */), |
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1328 uploadRunning_(false) |
| 4240 | 1329 { |
| 1330 patientsTemplates_[ResourceType_Patient] = "{{PatientID}} - {{PatientName}}"; | |
| 1331 patientsTemplates_[ResourceType_Study] = "{{StudyDate}} - {{StudyDescription}}"; | |
| 1332 patientsTemplates_[ResourceType_Series] = "{{Modality}} - {{SeriesDescription}}"; | |
| 1333 | |
| 1334 studiesTemplates_[ResourceType_Study] = "{{PatientID}} - {{PatientName}} - {{StudyDescription}}"; | |
| 1335 studiesTemplates_[ResourceType_Series] = patientsTemplates_[ResourceType_Series]; | |
| 1336 | |
| 1337 patients_.reset(new RootNode(context, ResourceType_Patient, patientsTemplates_)); | |
| 1338 studies_.reset(new RootNode(context, ResourceType_Study, studiesTemplates_)); | |
| 1339 dates_.reset(new ListOfStudiesByYear(context, studiesTemplates_)); | |
| 1340 } | |
| 1341 | |
| 1342 | |
| 1343 bool OrthancWebDav::IsExistingFolder(const UriComponents& path) | |
| 1344 { | |
| 1345 if (path.empty()) | |
| 1346 { | |
| 1347 return true; | |
| 1348 } | |
| 1349 else if (path[0] == BY_UIDS) | |
| 1350 { | |
| 1351 return (path.size() <= 3 && | |
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1352 (path.size() != 3 || path[2] != STUDY_INFO)); |
| 4240 | 1353 } |
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1354 else if (path[0] == BY_PATIENTS || |
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1355 path[0] == BY_STUDIES || |
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1356 path[0] == BY_DATES) |
| 4240 | 1357 { |
| 4252 | 1358 IWebDavBucket::Collection collection; |
| 1359 return GetRootNode(path[0]).ListCollection(collection, UriComponents(path.begin() + 1, path.end())); | |
| 4240 | 1360 } |
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1361 else if (allowUpload_ && |
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1362 path[0] == UPLOADS) |
| 4240 | 1363 { |
| 1364 return uploads_.IsExistingFolder(UriComponents(path.begin() + 1, path.end())); | |
| 1365 } | |
| 1366 else | |
| 1367 { | |
| 1368 return false; | |
| 1369 } | |
| 1370 } | |
| 1371 | |
| 1372 | |
| 1373 bool OrthancWebDav::ListCollection(Collection& collection, | |
| 1374 const UriComponents& path) | |
| 1375 { | |
| 1376 if (path.empty()) | |
| 1377 { | |
| 4241 | 1378 collection.AddResource(new Folder(BY_DATES)); |
| 4240 | 1379 collection.AddResource(new Folder(BY_PATIENTS)); |
| 1380 collection.AddResource(new Folder(BY_STUDIES)); | |
| 1381 collection.AddResource(new Folder(BY_UIDS)); | |
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1382 |
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1383 if (allowUpload_) |
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1384 { |
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1385 collection.AddResource(new Folder(UPLOADS)); |
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1386 } |
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1387 |
| 4240 | 1388 return true; |
| 1389 } | |
| 1390 else if (path[0] == BY_UIDS) | |
| 1391 { | |
| 1392 DatabaseLookup query; | |
| 1393 ResourceType level; | |
| 1394 size_t limit = 0; // By default, no limits | |
| 1395 | |
| 1396 if (path.size() == 1) | |
| 1397 { | |
| 1398 level = ResourceType_Study; | |
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1399 limit = 0; // TODO - Should we limit here? |
| 4240 | 1400 } |
| 1401 else if (path.size() == 2) | |
| 1402 { | |
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1403 AddVirtualFile(collection, path, STUDY_INFO); |
| 4240 | 1404 |
| 1405 level = ResourceType_Series; | |
| 1406 query.AddRestConstraint(DICOM_TAG_STUDY_INSTANCE_UID, path[1], | |
| 1407 true /* case sensitive */, true /* mandatory tag */); | |
| 1408 } | |
| 1409 else if (path.size() == 3) | |
| 1410 { | |
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1411 AddVirtualFile(collection, path, SERIES_INFO); |
| 4240 | 1412 |
| 1413 level = ResourceType_Instance; | |
| 1414 query.AddRestConstraint(DICOM_TAG_STUDY_INSTANCE_UID, path[1], | |
| 1415 true /* case sensitive */, true /* mandatory tag */); | |
| 1416 query.AddRestConstraint(DICOM_TAG_SERIES_INSTANCE_UID, path[2], | |
| 1417 true /* case sensitive */, true /* mandatory tag */); | |
| 1418 } | |
| 1419 else | |
| 1420 { | |
| 1421 return false; | |
| 1422 } | |
| 1423 | |
| 1424 DicomIdentifiersVisitor visitor(context_, collection, level); | |
| 1425 context_.Apply(visitor, query, level, 0 /* since */, limit); | |
| 1426 | |
| 1427 return true; | |
| 1428 } | |
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1429 else if (path[0] == BY_PATIENTS || |
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1430 path[0] == BY_STUDIES || |
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1431 path[0] == BY_DATES) |
| 4240 | 1432 { |
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1433 return GetRootNode(path[0]).ListCollection(collection, UriComponents(path.begin() + 1, path.end())); |
| 4240 | 1434 } |
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1435 else if (allowUpload_ && |
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1436 path[0] == UPLOADS) |
| 4240 | 1437 { |
| 1438 return uploads_.ListCollection(collection, UriComponents(path.begin() + 1, path.end())); | |
| 1439 } | |
| 1440 else | |
| 1441 { | |
| 1442 return false; | |
| 1443 } | |
| 1444 } | |
| 1445 | |
| 1446 | |
| 1447 bool OrthancWebDav::GetFileContent(MimeType& mime, | |
| 1448 std::string& content, | |
| 1449 boost::posix_time::ptime& modificationTime, | |
| 1450 const UriComponents& path) | |
| 1451 { | |
| 1452 if (path.empty()) | |
| 1453 { | |
| 1454 return false; | |
| 1455 } | |
| 1456 else if (path[0] == BY_UIDS) | |
| 1457 { | |
| 1458 if (path.size() == 3 && | |
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1459 path[2] == STUDY_INFO) |
| 4240 | 1460 { |
| 1461 DatabaseLookup query; | |
| 1462 query.AddRestConstraint(DICOM_TAG_STUDY_INSTANCE_UID, path[1], | |
| 1463 true /* case sensitive */, true /* mandatory tag */); | |
| 1464 | |
| 1465 OrthancJsonVisitor visitor(context_, content, ResourceType_Study); | |
| 1466 context_.Apply(visitor, query, ResourceType_Study, 0 /* since */, 0 /* no limit */); | |
| 1467 | |
| 1468 mime = MimeType_Json; | |
| 1469 return visitor.IsSuccess(); | |
| 1470 } | |
| 1471 else if (path.size() == 4 && | |
|
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1472 path[3] == SERIES_INFO) |
| 4240 | 1473 { |
| 1474 DatabaseLookup query; | |
| 1475 query.AddRestConstraint(DICOM_TAG_STUDY_INSTANCE_UID, path[1], | |
| 1476 true /* case sensitive */, true /* mandatory tag */); | |
| 1477 query.AddRestConstraint(DICOM_TAG_SERIES_INSTANCE_UID, path[2], | |
| 1478 true /* case sensitive */, true /* mandatory tag */); | |
| 1479 | |
| 1480 OrthancJsonVisitor visitor(context_, content, ResourceType_Series); | |
| 1481 context_.Apply(visitor, query, ResourceType_Series, 0 /* since */, 0 /* no limit */); | |
| 1482 | |
| 1483 mime = MimeType_Json; | |
| 1484 return visitor.IsSuccess(); | |
| 1485 } | |
| 1486 else if (path.size() == 4 && | |
| 1487 boost::ends_with(path[3], ".dcm")) | |
| 1488 { | |
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1489 const std::string sopInstanceUid = path[3].substr(0, path[3].size() - 4); |
| 4240 | 1490 |
| 1491 DatabaseLookup query; | |
| 1492 query.AddRestConstraint(DICOM_TAG_STUDY_INSTANCE_UID, path[1], | |
| 1493 true /* case sensitive */, true /* mandatory tag */); | |
| 1494 query.AddRestConstraint(DICOM_TAG_SERIES_INSTANCE_UID, path[2], | |
| 1495 true /* case sensitive */, true /* mandatory tag */); | |
| 1496 query.AddRestConstraint(DICOM_TAG_SOP_INSTANCE_UID, sopInstanceUid, | |
| 1497 true /* case sensitive */, true /* mandatory tag */); | |
| 1498 | |
| 1499 DicomFileVisitor visitor(context_, content, modificationTime); | |
| 1500 context_.Apply(visitor, query, ResourceType_Instance, 0 /* since */, 0 /* no limit */); | |
| 1501 | |
| 1502 mime = MimeType_Dicom; | |
| 1503 return visitor.IsSuccess(); | |
| 1504 } | |
| 1505 else | |
| 1506 { | |
| 1507 return false; | |
| 1508 } | |
| 1509 } | |
|
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1510 else if (path[0] == BY_PATIENTS || |
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1511 path[0] == BY_STUDIES || |
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1512 path[0] == BY_DATES) |
| 4240 | 1513 { |
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1514 return GetRootNode(path[0]).GetFileContent(mime, content, modificationTime, UriComponents(path.begin() + 1, path.end())); |
| 4241 | 1515 } |
|
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1516 else if (allowUpload_ && |
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1517 path[0] == UPLOADS) |
| 4240 | 1518 { |
| 1519 return uploads_.GetFileContent(mime, content, modificationTime, UriComponents(path.begin() + 1, path.end())); | |
| 1520 } | |
| 1521 else | |
| 1522 { | |
| 1523 return false; | |
| 1524 } | |
| 1525 } | |
| 1526 | |
| 1527 | |
| 1528 bool OrthancWebDav::StoreFile(const std::string& content, | |
| 1529 const UriComponents& path) | |
| 1530 { | |
|
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1531 if (allowUpload_ && |
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1532 path.size() >= 1 && |
| 4240 | 1533 path[0] == UPLOADS) |
| 1534 { | |
| 1535 UriComponents subpath(UriComponents(path.begin() + 1, path.end())); | |
| 1536 | |
| 1537 if (uploads_.StoreFile(content, subpath)) | |
| 1538 { | |
| 1539 if (!content.empty()) | |
| 1540 { | |
| 1541 uploadQueue_.Enqueue(new SingleValueObject<std::string>(Toolbox::FlattenUri(subpath))); | |
| 1542 } | |
| 1543 return true; | |
| 1544 } | |
| 1545 else | |
| 1546 { | |
| 1547 return false; | |
| 1548 } | |
| 1549 } | |
| 1550 else | |
| 1551 { | |
| 1552 return false; | |
| 1553 } | |
| 1554 } | |
| 1555 | |
| 1556 | |
| 1557 bool OrthancWebDav::CreateFolder(const UriComponents& path) | |
| 1558 { | |
|
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1559 if (allowUpload_ && |
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1560 path.size() >= 1 && |
| 4240 | 1561 path[0] == UPLOADS) |
| 1562 { | |
| 1563 return uploads_.CreateFolder(UriComponents(path.begin() + 1, path.end())); | |
| 1564 } | |
| 1565 else | |
| 1566 { | |
| 1567 return false; | |
| 1568 } | |
| 1569 } | |
| 1570 | |
| 1571 | |
| 1572 bool OrthancWebDav::DeleteItem(const std::vector<std::string>& path) | |
| 1573 { | |
|
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1574 if (path.empty()) |
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1575 { |
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1576 return false; |
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1577 } |
|
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|
1578 else if (path[0] == BY_UIDS && |
|
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|
1579 path.size() >= 2 && |
|
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|
1580 path.size() <= 4) |
|
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|
1581 { |
|
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1582 if (allowDicomDelete_) |
|
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|
1583 { |
|
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1584 ResourceType level; |
|
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|
1585 DatabaseLookup query; |
|
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|
1586 |
|
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|
1587 query.AddRestConstraint(DICOM_TAG_STUDY_INSTANCE_UID, path[1], |
|
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1588 true /* case sensitive */, true /* mandatory tag */); |
|
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|
1589 level = ResourceType_Study; |
|
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|
1590 |
|
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|
1591 if (path.size() >= 3) |
|
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|
1592 { |
|
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1593 if (path[2] == STUDY_INFO) |
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1594 { |
| 4252 | 1595 return true; // Allow deletion of virtual files (to avoid blocking recursive DELETE) |
|
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1596 } |
|
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|
1597 |
|
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|
1598 query.AddRestConstraint(DICOM_TAG_SERIES_INSTANCE_UID, path[2], |
|
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1599 true /* case sensitive */, true /* mandatory tag */); |
|
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|
1600 level = ResourceType_Series; |
|
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1601 } |
|
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|
1602 |
|
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|
1603 if (path.size() == 4) |
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|
1604 { |
|
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|
1605 if (path[3] == SERIES_INFO) |
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|
1606 { |
| 4252 | 1607 return true; // Allow deletion of virtual files (to avoid blocking recursive DELETE) |
|
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1608 } |
|
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|
1609 else if (boost::ends_with(path[3], ".dcm")) |
|
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|
1610 { |
|
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|
1611 const std::string sopInstanceUid = path[3].substr(0, path[3].size() - 4); |
|
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|
1612 |
|
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|
1613 query.AddRestConstraint(DICOM_TAG_SOP_INSTANCE_UID, sopInstanceUid, |
|
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|
1614 true /* case sensitive */, true /* mandatory tag */); |
|
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|
1615 level = ResourceType_Instance; |
|
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|
1616 } |
|
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|
1617 else |
|
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|
1618 { |
|
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|
1619 return false; |
|
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|
1620 } |
|
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|
1621 } |
|
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|
1622 |
|
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|
1623 DicomDeleteVisitor visitor(context_, level); |
| 4252 | 1624 context_.Apply(visitor, query, level, 0 /* since */, 0 /* no limit */); |
|
4242
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|
1625 return true; |
|
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|
1626 } |
|
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|
1627 else |
|
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|
1628 { |
|
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|
1629 return false; // read-only |
|
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|
1630 } |
|
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|
1631 } |
|
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|
1632 else if (path[0] == BY_PATIENTS || |
|
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|
1633 path[0] == BY_STUDIES || |
|
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|
1634 path[0] == BY_DATES) |
|
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|
1635 { |
|
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|
1636 if (allowDicomDelete_) |
|
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|
1637 { |
|
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|
1638 return GetRootNode(path[0]).DeleteItem(UriComponents(path.begin() + 1, path.end())); |
|
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|
1639 } |
|
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|
1640 else |
|
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changeset
|
1641 { |
|
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|
1642 return false; // read-only |
|
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|
1643 } |
|
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changeset
|
1644 } |
|
4243
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changeset
|
1645 else if (allowUpload_ && |
|
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changeset
|
1646 path[0] == UPLOADS) |
| 4240 | 1647 { |
| 1648 return uploads_.DeleteItem(UriComponents(path.begin() + 1, path.end())); | |
| 1649 } | |
| 1650 else | |
| 1651 { | |
|
4242
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changeset
|
1652 return false; |
| 4240 | 1653 } |
| 1654 } | |
| 1655 | |
| 1656 | |
| 1657 void OrthancWebDav::Start() | |
| 1658 { | |
|
4243
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changeset
|
1659 if (uploadRunning_) |
| 4240 | 1660 { |
| 1661 throw OrthancException(ErrorCode_BadSequenceOfCalls); | |
| 1662 } | |
|
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changeset
|
1663 else if (allowUpload_) |
| 4240 | 1664 { |
| 1665 LOG(INFO) << "Starting the WebDAV upload thread"; | |
|
4243
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changeset
|
1666 uploadRunning_ = true; |
| 4240 | 1667 uploadThread_ = boost::thread(UploadWorker, this); |
| 1668 } | |
| 1669 } | |
| 1670 | |
| 1671 | |
| 1672 void OrthancWebDav::Stop() | |
| 1673 { | |
|
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changeset
|
1674 if (uploadRunning_) |
| 4240 | 1675 { |
| 1676 LOG(INFO) << "Stopping the WebDAV upload thread"; | |
|
4243
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changeset
|
1677 uploadRunning_ = false; |
| 4240 | 1678 if (uploadThread_.joinable()) |
| 1679 { | |
| 1680 uploadThread_.join(); | |
| 1681 } | |
| 1682 } | |
| 1683 } | |
| 1684 } |