Mercurial > hg > orthanc
annotate OrthancServer/ParsedDicomFile.h @ 1702:9980875edc7c db-changes
started work on SliceOrdering
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
|---|---|
| date | Mon, 12 Oct 2015 17:49:23 +0200 |
| parents | 8ca0e89798b2 |
| children | a001f6226c7c |
| rev | line source |
|---|---|
| 790 | 1 /** |
| 2 * Orthanc - A Lightweight, RESTful DICOM Store | |
|
1288
6e7e5ed91c2d
upgrade to year 2015
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1160
diff
changeset
|
3 * Copyright (C) 2012-2015 Sebastien Jodogne, Medical Physics |
|
6e7e5ed91c2d
upgrade to year 2015
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1160
diff
changeset
|
4 * Department, University Hospital of Liege, Belgium |
| 790 | 5 * |
| 6 * This program is free software: you can redistribute it and/or | |
| 7 * modify it under the terms of the GNU General Public License as | |
| 8 * published by the Free Software Foundation, either version 3 of the | |
| 9 * License, or (at your option) any later version. | |
| 10 * | |
| 11 * In addition, as a special exception, the copyright holders of this | |
| 12 * program give permission to link the code of its release with the | |
| 13 * OpenSSL project's "OpenSSL" library (or with modified versions of it | |
| 14 * that use the same license as the "OpenSSL" library), and distribute | |
| 15 * the linked executables. You must obey the GNU General Public License | |
| 16 * in all respects for all of the code used other than "OpenSSL". If you | |
| 17 * modify file(s) with this exception, you may extend this exception to | |
| 18 * your version of the file(s), but you are not obligated to do so. If | |
| 19 * you do not wish to do so, delete this exception statement from your | |
| 20 * version. If you delete this exception statement from all source files | |
| 21 * in the program, then also delete it here. | |
| 22 * | |
| 23 * This program is distributed in the hope that it will be useful, but | |
| 24 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
| 26 * General Public License for more details. | |
| 27 * | |
| 28 * You should have received a copy of the GNU General Public License | |
| 29 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
| 30 **/ | |
| 31 | |
| 32 | |
| 33 #pragma once | |
| 34 | |
| 35 #include "../Core/DicomFormat/DicomInstanceHasher.h" | |
| 36 #include "../Core/RestApi/RestApiOutput.h" | |
| 37 #include "ServerEnumerations.h" | |
|
1612
96582230ddcb
Core/ImageFormats folder renamed as Core/Images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1562
diff
changeset
|
38 #include "../Core/Images/ImageAccessor.h" |
|
96582230ddcb
Core/ImageFormats folder renamed as Core/Images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1562
diff
changeset
|
39 #include "../Core/Images/ImageBuffer.h" |
| 790 | 40 |
| 41 namespace Orthanc | |
| 42 { | |
| 43 class ParsedDicomFile : public IDynamicObject | |
| 44 { | |
| 45 private: | |
| 794 | 46 struct PImpl; |
| 47 PImpl* pimpl_; | |
| 790 | 48 |
| 794 | 49 ParsedDicomFile(ParsedDicomFile& other); |
| 790 | 50 |
| 51 void Setup(const char* content, | |
| 52 size_t size); | |
| 53 | |
|
991
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
54 void RemovePrivateTagsInternal(const std::set<DicomTag>* toKeep); |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
55 |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1686
diff
changeset
|
56 void UpdateStorageUid(const DicomTag& tag, |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1686
diff
changeset
|
57 const std::string& value, |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1686
diff
changeset
|
58 bool decodeBinaryTags); |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1686
diff
changeset
|
59 |
| 790 | 60 public: |
| 61 ParsedDicomFile(); // Create a minimal DICOM instance | |
| 62 | |
| 63 ParsedDicomFile(const char* content, | |
| 791 | 64 size_t size); |
| 790 | 65 |
| 791 | 66 ParsedDicomFile(const std::string& content); |
| 790 | 67 |
| 792 | 68 ~ParsedDicomFile(); |
| 69 | |
| 793 | 70 void* GetDcmtkObject(); |
| 790 | 71 |
| 793 | 72 ParsedDicomFile* Clone(); |
| 790 | 73 |
| 74 void SendPathValue(RestApiOutput& output, | |
| 75 const UriComponents& uri); | |
| 76 | |
| 77 void Answer(RestApiOutput& output); | |
| 78 | |
| 79 void Remove(const DicomTag& tag); | |
| 80 | |
|
1699
8ca0e89798b2
"/modify" can insert/modify sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1695
diff
changeset
|
81 void Replace(const DicomTag& tag, |
|
8ca0e89798b2
"/modify" can insert/modify sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1695
diff
changeset
|
82 const std::string& utf8Value, |
|
8ca0e89798b2
"/modify" can insert/modify sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1695
diff
changeset
|
83 DicomReplaceMode mode = DicomReplaceMode_InsertIfAbsent); |
| 1695 | 84 |
| 85 void Replace(const DicomTag& tag, | |
|
1699
8ca0e89798b2
"/modify" can insert/modify sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1695
diff
changeset
|
86 const Json::Value& value, // Assumed to be encoded with UTF-8 |
|
8ca0e89798b2
"/modify" can insert/modify sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1695
diff
changeset
|
87 bool decodeBinaryTags, |
| 1695 | 88 DicomReplaceMode mode = DicomReplaceMode_InsertIfAbsent); |
| 790 | 89 |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1686
diff
changeset
|
90 void Insert(const DicomTag& tag, |
| 1695 | 91 const Json::Value& value, // Assumed to be encoded with UTF-8 |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1686
diff
changeset
|
92 bool decodeBinaryTags); |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1686
diff
changeset
|
93 |
|
991
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
94 void RemovePrivateTags() |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
95 { |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
96 RemovePrivateTagsInternal(NULL); |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
97 } |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
98 |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
99 void RemovePrivateTags(const std::set<DicomTag>& toKeep) |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
100 { |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
101 RemovePrivateTagsInternal(&toKeep); |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
102 } |
| 790 | 103 |
| 104 bool GetTagValue(std::string& value, | |
| 105 const DicomTag& tag); | |
| 106 | |
| 107 DicomInstanceHasher GetHasher(); | |
| 108 | |
| 109 void SaveToMemoryBuffer(std::string& buffer); | |
| 110 | |
| 111 void SaveToFile(const std::string& path); | |
|
800
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
795
diff
changeset
|
112 |
| 1562 | 113 void EmbedContent(const std::string& dataUriScheme); |
|
800
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
795
diff
changeset
|
114 |
| 1562 | 115 void EmbedImage(const ImageAccessor& accessor); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
116 |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
117 void EmbedImage(const std::string& mime, |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
118 const std::string& content); |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
119 |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
120 void ExtractImage(ImageBuffer& result, |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
121 unsigned int frame); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
122 |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
123 void ExtractImage(ImageBuffer& result, |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
124 unsigned int frame, |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
125 ImageExtractionMode mode); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
126 |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
127 void ExtractPngImage(std::string& result, |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
128 unsigned int frame, |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
800
diff
changeset
|
129 ImageExtractionMode mode); |
|
956
2fd5a163776d
primitives for proper encoding handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
130 |
|
2fd5a163776d
primitives for proper encoding handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
131 Encoding GetEncoding() const; |
|
1090
e494ceb8d763
support more encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
991
diff
changeset
|
132 |
|
e494ceb8d763
support more encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
991
diff
changeset
|
133 void SetEncoding(Encoding encoding); |
|
1160
80671157d051
generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1090
diff
changeset
|
134 |
|
80671157d051
generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1090
diff
changeset
|
135 void ToJson(Json::Value& target, |
| 1686 | 136 DicomToJsonFormat format, |
| 137 unsigned int maxStringLength); | |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
138 |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
139 bool HasTag(const DicomTag& tag) const; |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
140 |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
141 void EmbedPdf(const std::string& pdf); |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
142 |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
143 bool ExtractPdf(std::string& pdf); |
|
1662
09be34b2f30e
ParsedDicomFile::Convert()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1612
diff
changeset
|
144 |
|
09be34b2f30e
ParsedDicomFile::Convert()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1612
diff
changeset
|
145 void Convert(DicomMap& tags); |
| 790 | 146 }; |
| 147 | |
| 148 } |