orthanc: OrthancServer/OrthancRestApi.cpp annotate

annotate OrthancServer/OrthancRestApi.cpp @ 357:8d3a0db39967

fix of standalone builds

author	Sebastien Jodogne <s.jodogne@gmail.com>
date	Thu, 31 Jan 2013 14:06:34 +0100
parents	64625960af22
children	4d5f0857ec9c

rev	line source
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1 /**
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	2 * Orthanc - A Lightweight, RESTful DICOM Store
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	3 * Copyright (C) 2012 Medical Physics Department, CHU of Liege,
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	4 * Belgium
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	5 *
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	6 * This program is free software: you can redistribute it and/or
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	7 * modify it under the terms of the GNU General Public License as
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	8 * published by the Free Software Foundation, either version 3 of the
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	9 * License, or (at your option) any later version.
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	10 *
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	11 * In addition, as a special exception, the copyright holders of this
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	12 * program give permission to link the code of its release with the
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	13 * OpenSSL project's "OpenSSL" library (or with modified versions of it
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	14 * that use the same license as the "OpenSSL" library), and distribute
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	15 * the linked executables. You must obey the GNU General Public License
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	16 * in all respects for all of the code used other than "OpenSSL". If you
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	17 * modify file(s) with this exception, you may extend this exception to
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	18 * your version of the file(s), but you are not obligated to do so. If
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	19 * you do not wish to do so, delete this exception statement from your
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	20 * version. If you delete this exception statement from all source files
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	21 * in the program, then also delete it here.
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	22 *
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	23 * This program is distributed in the hope that it will be useful, but
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	24 * WITHOUT ANY WARRANTY; without even the implied warranty of
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	26 * General Public License for more details.
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	27 *
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	28 * You should have received a copy of the GNU General Public License
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	29 * along with this program. If not, see <http://www.gnu.org/licenses/>.
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	30 **/
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	31
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	32
230 ae2367145b49 renames Sebastien Jodogne <s.jodogne@gmail.com> parents: 229 diff changeset	33 #include "OrthancRestApi.h"
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	34
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	35 #include "../Core/HttpServer/FilesystemHttpSender.h"
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	36 #include "../Core/Uuid.h"
248 2442033911d6 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 238 diff changeset	37 #include "../Core/Compression/HierarchicalZipWriter.h"
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	38 #include "DicomProtocol/DicomUserConnection.h"
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	39 #include "FromDcmtkBridge.h"
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	40 #include "OrthancInitialization.h"
213 4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	41 #include "ServerToolbox.h"
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	42
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	43 #include <dcmtk/dcmdata/dcistrmb.h>
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	44 #include <dcmtk/dcmdata/dcfilefo.h>
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	45 #include <boost/lexical_cast.hpp>
216 e5d5d4a9a326 refactored upload of dicom through http Sebastien Jodogne <s.jodogne@gmail.com> parents: 215 diff changeset	46 #include <glog/logging.h>
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	47
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	48
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	49 #define RETRIEVE_CONTEXT(call) \
230 ae2367145b49 renames Sebastien Jodogne <s.jodogne@gmail.com> parents: 229 diff changeset	50 OrthancRestApi& contextApi = \
ae2367145b49 renames Sebastien Jodogne <s.jodogne@gmail.com> parents: 229 diff changeset	51 dynamic_cast<OrthancRestApi&>(call.GetContext()); \
225 03aa59ecf6d8 fix for mingw Sebastien Jodogne <s.jodogne@gmail.com> parents: 224 diff changeset	52 ServerContext& context = contextApi.GetContext()
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	53
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	54 #define RETRIEVE_MODALITIES(call) \
230 ae2367145b49 renames Sebastien Jodogne <s.jodogne@gmail.com> parents: 229 diff changeset	55 const OrthancRestApi::Modalities& modalities = \
ae2367145b49 renames Sebastien Jodogne <s.jodogne@gmail.com> parents: 229 diff changeset	56 dynamic_cast<OrthancRestApi&>(call.GetContext()).GetModalities();
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	57
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	58
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	59
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	60 namespace Orthanc
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	61 {
315 fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 314 diff changeset	62 // TODO IMPROVE MULTITHREADING
316 d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	63 // Every call to "ParsedDicomFile" must lock this mutex!!!
315 fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 314 diff changeset	64 static boost::mutex cacheMutex_;
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 314 diff changeset	65
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 314 diff changeset	66
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	67 // DICOM SCU ----------------------------------------------------------------
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	68
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	69 static void ConnectToModality(DicomUserConnection& connection,
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	70 const std::string& name)
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	71 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	72 std::string aet, address;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	73 int port;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	74 GetDicomModality(name, aet, address, port);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	75 connection.SetLocalApplicationEntityTitle(GetGlobalStringParameter("DicomAet", "ORTHANC"));
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	76 connection.SetDistantApplicationEntityTitle(aet);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	77 connection.SetDistantHost(address);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	78 connection.SetDistantPort(port);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	79 connection.Open();
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	80 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	81
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	82 static bool MergeQueryAndTemplate(DicomMap& result,
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	83 const std::string& postData)
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	84 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	85 Json::Value query;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	86 Json::Reader reader;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	87
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	88 if (!reader.parse(postData, query) \|\|
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	89 query.type() != Json::objectValue)
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	90 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	91 return false;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	92 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	93
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	94 Json::Value::Members members = query.getMemberNames();
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	95 for (size_t i = 0; i < members.size(); i++)
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	96 {
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	97 DicomTag t = FromDcmtkBridge::ParseTag(members[i]);
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	98 result.SetValue(t, query[members[i]].asString());
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	99 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	100
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	101 return true;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	102 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	103
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	104 static void DicomFindPatient(RestApi::PostCall& call)
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	105 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	106 DicomMap m;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	107 DicomMap::SetupFindPatientTemplate(m);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	108 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	109 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	110 return;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	111 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	112
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	113 DicomUserConnection connection;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	114 ConnectToModality(connection, call.GetUriComponent("id", ""));
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	115
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	116 DicomFindAnswers answers;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	117 connection.FindPatient(answers, m);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	118
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	119 Json::Value result;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	120 answers.ToJson(result);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	121 call.GetOutput().AnswerJson(result);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	122 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	123
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	124 static void DicomFindStudy(RestApi::PostCall& call)
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	125 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	126 DicomMap m;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	127 DicomMap::SetupFindStudyTemplate(m);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	128 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	129 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	130 return;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	131 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	132
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	133 if (m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 &&
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	134 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2)
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	135 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	136 return;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	137 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	138
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	139 DicomUserConnection connection;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	140 ConnectToModality(connection, call.GetUriComponent("id", ""));
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	141
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	142 DicomFindAnswers answers;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	143 connection.FindStudy(answers, m);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	144
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	145 Json::Value result;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	146 answers.ToJson(result);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	147 call.GetOutput().AnswerJson(result);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	148 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	149
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	150 static void DicomFindSeries(RestApi::PostCall& call)
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	151 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	152 DicomMap m;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	153 DicomMap::SetupFindSeriesTemplate(m);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	154 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	155 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	156 return;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	157 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	158
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	159 if ((m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 &&
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	160 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2) \|\|
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	161 m.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).AsString().size() <= 2)
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	162 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	163 return;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	164 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	165
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	166 DicomUserConnection connection;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	167 ConnectToModality(connection, call.GetUriComponent("id", ""));
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	168
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	169 DicomFindAnswers answers;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	170 connection.FindSeries(answers, m);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	171
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	172 Json::Value result;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	173 answers.ToJson(result);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	174 call.GetOutput().AnswerJson(result);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	175 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	176
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	177 static void DicomFind(RestApi::PostCall& call)
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	178 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	179 DicomMap m;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	180 DicomMap::SetupFindPatientTemplate(m);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	181 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	182 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	183 return;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	184 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	185
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	186 DicomUserConnection connection;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	187 ConnectToModality(connection, call.GetUriComponent("id", ""));
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	188
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	189 DicomFindAnswers patients;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	190 connection.FindPatient(patients, m);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	191
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	192 // Loop over the found patients
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	193 Json::Value result = Json::arrayValue;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	194 for (size_t i = 0; i < patients.GetSize(); i++)
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	195 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	196 Json::Value patient(Json::objectValue);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	197 FromDcmtkBridge::ToJson(patient, patients.GetAnswer(i));
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	198
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	199 DicomMap::SetupFindStudyTemplate(m);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	200 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	201 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	202 return;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	203 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	204 m.CopyTagIfExists(patients.GetAnswer(i), DICOM_TAG_PATIENT_ID);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	205
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	206 DicomFindAnswers studies;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	207 connection.FindStudy(studies, m);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	208
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	209 patient["Studies"] = Json::arrayValue;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	210
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	211 // Loop over the found studies
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	212 for (size_t j = 0; j < studies.GetSize(); j++)
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	213 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	214 Json::Value study(Json::objectValue);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	215 FromDcmtkBridge::ToJson(study, studies.GetAnswer(j));
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	216
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	217 DicomMap::SetupFindSeriesTemplate(m);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	218 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	219 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	220 return;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	221 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	222 m.CopyTagIfExists(studies.GetAnswer(j), DICOM_TAG_PATIENT_ID);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	223 m.CopyTagIfExists(studies.GetAnswer(j), DICOM_TAG_STUDY_INSTANCE_UID);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	224
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	225 DicomFindAnswers series;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	226 connection.FindSeries(series, m);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	227
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	228 // Loop over the found series
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	229 study["Series"] = Json::arrayValue;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	230 for (size_t k = 0; k < series.GetSize(); k++)
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	231 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	232 Json::Value series2(Json::objectValue);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	233 FromDcmtkBridge::ToJson(series2, series.GetAnswer(k));
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	234 study["Series"].append(series2);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	235 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	236
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	237 patient["Studies"].append(study);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	238 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	239
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	240 result.append(patient);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	241 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	242
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	243 call.GetOutput().AnswerJson(result);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	244 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	245
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	246
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	247 static void DicomStore(RestApi::PostCall& call)
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	248 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	249 RETRIEVE_CONTEXT(call);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	250
231 8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	251 std::string remote = call.GetUriComponent("id", "");
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	252 DicomUserConnection connection;
231 8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	253 ConnectToModality(connection, remote);
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	254
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	255 const std::string& resourceId = call.GetPostBody();
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	256
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	257 Json::Value found;
231 8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	258 if (context.GetIndex().LookupResource(found, resourceId, ResourceType_Series))
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	259 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	260 // The UUID corresponds to a series
231 8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	261 context.GetIndex().LogExportedResource(resourceId, remote);
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	262
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	263 for (Json::Value::ArrayIndex i = 0; i < found["Instances"].size(); i++)
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	264 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	265 std::string instanceId = found["Instances"][i].asString();
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	266 std::string dicom;
233 c11273198cef rename Sebastien Jodogne <s.jodogne@gmail.com> parents: 232 diff changeset	267 context.ReadFile(dicom, instanceId, FileContentType_Dicom);
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	268 connection.Store(dicom);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	269 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	270
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	271 call.GetOutput().AnswerBuffer("{}", "application/json");
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	272 }
231 8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	273 else if (context.GetIndex().LookupResource(found, resourceId, ResourceType_Instance))
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	274 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	275 // The UUID corresponds to an instance
231 8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	276 context.GetIndex().LogExportedResource(resourceId, remote);
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	277
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	278 std::string dicom;
233 c11273198cef rename Sebastien Jodogne <s.jodogne@gmail.com> parents: 232 diff changeset	279 context.ReadFile(dicom, resourceId, FileContentType_Dicom);
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	280 connection.Store(dicom);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	281
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	282 call.GetOutput().AnswerBuffer("{}", "application/json");
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	283 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	284 else
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	285 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	286 // The POST body is not a known resource, assume that it
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	287 // contains a raw DICOM instance
231 8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	288 connection.Store(resourceId);
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	289 call.GetOutput().AnswerBuffer("{}", "application/json");
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	290 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	291 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	292
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	293
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	294
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	295 // System information -------------------------------------------------------
211 b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	296
b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	297 static void ServeRoot(RestApi::GetCall& call)
b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	298 {
b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	299 call.GetOutput().Redirect("app/explorer.html");
b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	300 }
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	301
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	302 static void GetSystemInformation(RestApi::GetCall& call)
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	303 {
238 e4148b0ab1d0 statistics URI Sebastien Jodogne <s.jodogne@gmail.com> parents: 237 diff changeset	304 Json::Value result = Json::objectValue;
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	305
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	306 result["Version"] = ORTHANC_VERSION;
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	307 result["Name"] = GetGlobalStringParameter("Name", "");
238 e4148b0ab1d0 statistics URI Sebastien Jodogne <s.jodogne@gmail.com> parents: 237 diff changeset	308
e4148b0ab1d0 statistics URI Sebastien Jodogne <s.jodogne@gmail.com> parents: 237 diff changeset	309 call.GetOutput().AnswerJson(result);
e4148b0ab1d0 statistics URI Sebastien Jodogne <s.jodogne@gmail.com> parents: 237 diff changeset	310 }
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	311
238 e4148b0ab1d0 statistics URI Sebastien Jodogne <s.jodogne@gmail.com> parents: 237 diff changeset	312 static void GetStatistics(RestApi::GetCall& call)
e4148b0ab1d0 statistics URI Sebastien Jodogne <s.jodogne@gmail.com> parents: 237 diff changeset	313 {
e4148b0ab1d0 statistics URI Sebastien Jodogne <s.jodogne@gmail.com> parents: 237 diff changeset	314 RETRIEVE_CONTEXT(call);
e4148b0ab1d0 statistics URI Sebastien Jodogne <s.jodogne@gmail.com> parents: 237 diff changeset	315 Json::Value result = Json::objectValue;
e4148b0ab1d0 statistics URI Sebastien Jodogne <s.jodogne@gmail.com> parents: 237 diff changeset	316 context.GetIndex().ComputeStatistics(result);
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	317 call.GetOutput().AnswerJson(result);
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	318 }
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	319
342 a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	320 static void GenerateUid(RestApi::GetCall& call)
a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	321 {
a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	322 std::string level = call.GetArgument("level", "");
a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	323 if (level == "patient")
a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	324 {
a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	325 call.GetOutput().AnswerBuffer(FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Patient), "text/plain");
a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	326 }
a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	327 else if (level == "study")
a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	328 {
a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	329 call.GetOutput().AnswerBuffer(FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Study), "text/plain");
a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	330 }
a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	331 else if (level == "series")
a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	332 {
a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	333 call.GetOutput().AnswerBuffer(FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Series), "text/plain");
a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	334 }
a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	335 else if (level == "instance")
a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	336 {
a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	337 call.GetOutput().AnswerBuffer(FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Instance), "text/plain");
a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	338 }
a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	339 }
a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	340
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	341
211 b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	342 // List all the patients, studies, series or instances ----------------------
b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	343
b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	344 template <enum ResourceType resourceType>
b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	345 static void ListResources(RestApi::GetCall& call)
b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	346 {
b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	347 RETRIEVE_CONTEXT(call);
b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	348
b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	349 Json::Value result;
b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	350 context.GetIndex().GetAllUuids(result, resourceType);
b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	351 call.GetOutput().AnswerJson(result);
b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	352 }
b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	353
212 f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	354 template <enum ResourceType resourceType>
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	355 static void GetSingleResource(RestApi::GetCall& call)
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	356 {
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	357 RETRIEVE_CONTEXT(call);
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	358
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	359 Json::Value result;
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	360 if (context.GetIndex().LookupResource(result, call.GetUriComponent("id", ""), resourceType))
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	361 {
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	362 call.GetOutput().AnswerJson(result);
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	363 }
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	364 }
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	365
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	366 template <enum ResourceType resourceType>
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	367 static void DeleteSingleResource(RestApi::DeleteCall& call)
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	368 {
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	369 RETRIEVE_CONTEXT(call);
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	370
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	371 Json::Value result;
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	372 if (context.GetIndex().DeleteResource(result, call.GetUriComponent("id", ""), resourceType))
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	373 {
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	374 call.GetOutput().AnswerJson(result);
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	375 }
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	376 }
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	377
211 b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	378
248 2442033911d6 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 238 diff changeset	379 // Download of ZIP files ----------------------------------------------------
2442033911d6 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 238 diff changeset	380
250 f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	381
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	382 static std::string GetDirectoryNameInArchive(const Json::Value& resource,
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	383 ResourceType resourceType)
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	384 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	385 switch (resourceType)
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	386 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	387 case ResourceType_Patient:
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	388 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	389 std::string p = resource["MainDicomTags"]["PatientID"].asString();
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	390 std::string n = resource["MainDicomTags"]["PatientName"].asString();
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	391 return p + " " + n;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	392 }
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	393
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	394 case ResourceType_Study:
253 15fcd925b05b improvement Sebastien Jodogne <s.jodogne@gmail.com> parents: 250 diff changeset	395 {
250 f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	396 return resource["MainDicomTags"]["StudyDescription"].asString();
253 15fcd925b05b improvement Sebastien Jodogne <s.jodogne@gmail.com> parents: 250 diff changeset	397 }
250 f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	398
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	399 case ResourceType_Series:
253 15fcd925b05b improvement Sebastien Jodogne <s.jodogne@gmail.com> parents: 250 diff changeset	400 {
15fcd925b05b improvement Sebastien Jodogne <s.jodogne@gmail.com> parents: 250 diff changeset	401 std::string d = resource["MainDicomTags"]["SeriesDescription"].asString();
15fcd925b05b improvement Sebastien Jodogne <s.jodogne@gmail.com> parents: 250 diff changeset	402 std::string m = resource["MainDicomTags"]["Modality"].asString();
15fcd925b05b improvement Sebastien Jodogne <s.jodogne@gmail.com> parents: 250 diff changeset	403 return m + " " + d;
15fcd925b05b improvement Sebastien Jodogne <s.jodogne@gmail.com> parents: 250 diff changeset	404 }
250 f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	405
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	406 default:
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	407 throw OrthancException(ErrorCode_InternalError);
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	408 }
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	409 }
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	410
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	411 static bool CreateRootDirectoryInArchive(HierarchicalZipWriter& writer,
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	412 ServerContext& context,
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	413 const Json::Value& resource,
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	414 ResourceType resourceType)
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	415 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	416 if (resourceType == ResourceType_Patient)
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	417 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	418 return true;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	419 }
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	420
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	421 ResourceType parentType = GetParentResourceType(resourceType);
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	422 Json::Value parent;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	423
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	424 switch (resourceType)
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	425 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	426 case ResourceType_Study:
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	427 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	428 if (!context.GetIndex().LookupResource(parent, resource["ParentPatient"].asString(), parentType))
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	429 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	430 return false;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	431 }
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	432
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	433 break;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	434 }
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	435
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	436 case ResourceType_Series:
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	437 if (!context.GetIndex().LookupResource(parent, resource["ParentStudy"].asString(), parentType) \|\|
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	438 !CreateRootDirectoryInArchive(writer, context, parent, parentType))
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	439 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	440 return false;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	441 }
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	442 break;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	443
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	444 default:
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	445 throw OrthancException(ErrorCode_NotImplemented);
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	446 }
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	447
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	448 writer.OpenDirectory(GetDirectoryNameInArchive(parent, parentType).c_str());
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	449 return true;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	450 }
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	451
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	452 static bool ArchiveInstance(HierarchicalZipWriter& writer,
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	453 ServerContext& context,
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	454 const std::string& instancePublicId)
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	455 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	456 Json::Value instance;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	457 if (!context.GetIndex().LookupResource(instance, instancePublicId, ResourceType_Instance))
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	458 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	459 return false;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	460 }
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	461
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	462 std::string filename = instance["MainDicomTags"]["SOPInstanceUID"].asString() + ".dcm";
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	463 writer.OpenFile(filename.c_str());
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	464
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	465 std::string dicom;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	466 context.ReadFile(dicom, instancePublicId, FileContentType_Dicom);
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	467 writer.Write(dicom);
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	468
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	469 return true;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	470 }
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	471
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	472 static bool ArchiveInternal(HierarchicalZipWriter& writer,
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	473 ServerContext& context,
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	474 const std::string& publicId,
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	475 ResourceType resourceType,
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	476 bool isFirstLevel)
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	477 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	478 Json::Value resource;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	479 if (!context.GetIndex().LookupResource(resource, publicId, resourceType))
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	480 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	481 return false;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	482 }
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	483
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	484 if (isFirstLevel &&
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	485 !CreateRootDirectoryInArchive(writer, context, resource, resourceType))
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	486 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	487 return false;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	488 }
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	489
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	490 writer.OpenDirectory(GetDirectoryNameInArchive(resource, resourceType).c_str());
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	491
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	492 switch (resourceType)
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	493 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	494 case ResourceType_Patient:
299 f13eef8ce651 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	495 for (Json::Value::ArrayIndex i = 0; i < resource["Studies"].size(); i++)
250 f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	496 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	497 std::string studyId = resource["Studies"][i].asString();
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	498 if (!ArchiveInternal(writer, context, studyId, ResourceType_Study, false))
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	499 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	500 return false;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	501 }
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	502 }
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	503 break;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	504
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	505 case ResourceType_Study:
299 f13eef8ce651 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	506 for (Json::Value::ArrayIndex i = 0; i < resource["Series"].size(); i++)
250 f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	507 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	508 std::string seriesId = resource["Series"][i].asString();
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	509 if (!ArchiveInternal(writer, context, seriesId, ResourceType_Series, false))
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	510 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	511 return false;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	512 }
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	513 }
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	514 break;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	515
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	516 case ResourceType_Series:
299 f13eef8ce651 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	517 for (Json::Value::ArrayIndex i = 0; i < resource["Instances"].size(); i++)
250 f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	518 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	519 if (!ArchiveInstance(writer, context, resource["Instances"][i].asString()))
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	520 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	521 return false;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	522 }
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	523 }
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	524 break;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	525
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	526 default:
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	527 throw OrthancException(ErrorCode_InternalError);
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	528 }
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	529
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	530 writer.CloseDirectory();
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	531 return true;
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	532 }
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	533
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	534 template <enum ResourceType resourceType>
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	535 static void GetArchive(RestApi::GetCall& call)
248 2442033911d6 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 238 diff changeset	536 {
2442033911d6 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 238 diff changeset	537 RETRIEVE_CONTEXT(call);
2442033911d6 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 238 diff changeset	538
250 f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	539 // Create a RAII for the temporary file to manage the ZIP file
248 2442033911d6 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 238 diff changeset	540 Toolbox::TemporaryFile tmp;
250 f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	541 std::string id = call.GetUriComponent("id", "");
248 2442033911d6 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 238 diff changeset	542
2442033911d6 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 238 diff changeset	543 {
250 f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	544 // Create a ZIP writer
248 2442033911d6 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 238 diff changeset	545 HierarchicalZipWriter writer(tmp.GetPath().c_str());
2442033911d6 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 238 diff changeset	546
250 f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	547 // Store the requested resource into the ZIP
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	548 if (!ArchiveInternal(writer, context, id, resourceType, true))
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	549 {
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	550 return;
248 2442033911d6 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 238 diff changeset	551 }
2442033911d6 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 238 diff changeset	552 }
250 f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	553
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	554 // Prepare the sending of the ZIP file
248 2442033911d6 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 238 diff changeset	555 FilesystemHttpSender sender(tmp.GetPath().c_str());
250 f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	556 sender.SetContentType("application/zip");
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	557 sender.SetDownloadFilename(id + ".zip");
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	558
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	559 // Send the ZIP
248 2442033911d6 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 238 diff changeset	560 call.GetOutput().AnswerFile(sender);
250 f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	561
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	562 // The temporary file is automatically removed thanks to the RAII
248 2442033911d6 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 238 diff changeset	563 }
2442033911d6 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 238 diff changeset	564
2442033911d6 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 238 diff changeset	565
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	566 // Changes API --------------------------------------------------------------
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	567
231 8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	568 static void GetSinceAndLimit(int64_t& since,
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	569 unsigned int& limit,
237 16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	570 bool& last,
231 8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	571 const RestApi::GetCall& call)
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	572 {
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	573 static const unsigned int MAX_RESULTS = 100;
237 16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	574
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	575 if (call.HasArgument("last"))
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	576 {
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	577 last = true;
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	578 return;
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	579 }
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	580
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	581 last = false;
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	582
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	583 try
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	584 {
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	585 since = boost::lexical_cast<int64_t>(call.GetArgument("since", "0"));
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	586 limit = boost::lexical_cast<unsigned int>(call.GetArgument("limit", "0"));
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	587 }
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	588 catch (boost::bad_lexical_cast)
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	589 {
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	590 return;
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	591 }
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	592
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	593 if (limit == 0 \|\| limit > MAX_RESULTS)
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	594 {
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	595 limit = MAX_RESULTS;
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	596 }
231 8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	597 }
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	598
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	599 static void GetChanges(RestApi::GetCall& call)
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	600 {
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	601 RETRIEVE_CONTEXT(call);
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	602
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	603 //std::string filter = GetArgument(getArguments, "filter", "");
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	604 int64_t since;
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	605 unsigned int limit;
237 16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	606 bool last;
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	607 GetSinceAndLimit(since, limit, last, call);
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	608
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	609 Json::Value result;
237 16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	610 if ((!last && context.GetIndex().GetChanges(result, since, limit)) \|\|
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	611 ( last && context.GetIndex().GetLastChange(result)))
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	612 {
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	613 call.GetOutput().AnswerJson(result);
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	614 }
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	615 }
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	616
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	617
231 8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	618 static void GetExports(RestApi::GetCall& call)
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	619 {
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	620 RETRIEVE_CONTEXT(call);
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	621
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	622 int64_t since;
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	623 unsigned int limit;
237 16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	624 bool last;
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	625 GetSinceAndLimit(since, limit, last, call);
231 8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	626
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	627 Json::Value result;
237 16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	628 if ((!last && context.GetIndex().GetExportedResources(result, since, limit)) \|\|
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	629 ( last && context.GetIndex().GetLastExportedResource(result)))
231 8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	630 {
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	631 call.GetOutput().AnswerJson(result);
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	632 }
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	633 }
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 230 diff changeset	634
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	635
272 337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	636 // Get information about a single patient -----------------------------------
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	637
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	638 static void IsProtectedPatient(RestApi::GetCall& call)
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	639 {
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	640 RETRIEVE_CONTEXT(call);
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	641 std::string publicId = call.GetUriComponent("id", "");
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	642 bool isProtected = context.GetIndex().IsProtectedPatient(publicId);
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	643 call.GetOutput().AnswerBuffer(isProtected ? "1" : "0", "text/plain");
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	644 }
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	645
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	646
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	647 static void SetPatientProtection(RestApi::PutCall& call)
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	648 {
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	649 RETRIEVE_CONTEXT(call);
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	650 std::string publicId = call.GetUriComponent("id", "");
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	651 std::string s = Toolbox::StripSpaces(call.GetPutBody());
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	652
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	653 if (s == "0")
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	654 {
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	655 context.GetIndex().SetProtectedPatient(publicId, false);
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	656 call.GetOutput().AnswerBuffer("", "text/plain");
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	657 }
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	658 else if (s == "1")
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	659 {
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	660 context.GetIndex().SetProtectedPatient(publicId, true);
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	661 call.GetOutput().AnswerBuffer("", "text/plain");
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	662 }
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	663 else
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	664 {
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	665 // Bad request
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	666 }
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	667 }
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	668
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	669
213 4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	670 // Get information about a single instance ----------------------------------
4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	671
4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	672 static void GetInstanceFile(RestApi::GetCall& call)
4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	673 {
4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	674 RETRIEVE_CONTEXT(call);
4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	675
4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	676 std::string publicId = call.GetUriComponent("id", "");
233 c11273198cef rename Sebastien Jodogne <s.jodogne@gmail.com> parents: 232 diff changeset	677 context.AnswerFile(call.GetOutput(), publicId, FileContentType_Dicom);
213 4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	678 }
4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	679
4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	680
4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	681 template <bool simplify>
4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	682 static void GetInstanceTags(RestApi::GetCall& call)
4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	683 {
4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	684 RETRIEVE_CONTEXT(call);
4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	685
4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	686 std::string publicId = call.GetUriComponent("id", "");
226 8a26a8e85edf refactoring to read files Sebastien Jodogne <s.jodogne@gmail.com> parents: 225 diff changeset	687
8a26a8e85edf refactoring to read files Sebastien Jodogne <s.jodogne@gmail.com> parents: 225 diff changeset	688 Json::Value full;
8a26a8e85edf refactoring to read files Sebastien Jodogne <s.jodogne@gmail.com> parents: 225 diff changeset	689 context.ReadJson(full, publicId);
213 4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	690
226 8a26a8e85edf refactoring to read files Sebastien Jodogne <s.jodogne@gmail.com> parents: 225 diff changeset	691 if (simplify)
8a26a8e85edf refactoring to read files Sebastien Jodogne <s.jodogne@gmail.com> parents: 225 diff changeset	692 {
8a26a8e85edf refactoring to read files Sebastien Jodogne <s.jodogne@gmail.com> parents: 225 diff changeset	693 Json::Value simplified;
8a26a8e85edf refactoring to read files Sebastien Jodogne <s.jodogne@gmail.com> parents: 225 diff changeset	694 SimplifyTags(simplified, full);
8a26a8e85edf refactoring to read files Sebastien Jodogne <s.jodogne@gmail.com> parents: 225 diff changeset	695 call.GetOutput().AnswerJson(simplified);
8a26a8e85edf refactoring to read files Sebastien Jodogne <s.jodogne@gmail.com> parents: 225 diff changeset	696 }
8a26a8e85edf refactoring to read files Sebastien Jodogne <s.jodogne@gmail.com> parents: 225 diff changeset	697 else
8a26a8e85edf refactoring to read files Sebastien Jodogne <s.jodogne@gmail.com> parents: 225 diff changeset	698 {
8a26a8e85edf refactoring to read files Sebastien Jodogne <s.jodogne@gmail.com> parents: 225 diff changeset	699 call.GetOutput().AnswerJson(full);
213 4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	700 }
4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	701 }
4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	702
214 03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	703
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	704 static void ListFrames(RestApi::GetCall& call)
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	705 {
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	706 RETRIEVE_CONTEXT(call);
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	707
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	708 Json::Value instance;
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	709 if (context.GetIndex().LookupResource(instance, call.GetUriComponent("id", ""), ResourceType_Instance))
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	710 {
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	711 unsigned int numberOfFrames = 1;
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	712
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	713 try
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	714 {
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	715 Json::Value tmp = instance["MainDicomTags"]["NumberOfFrames"];
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	716 numberOfFrames = boost::lexical_cast<unsigned int>(tmp.asString());
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	717 }
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	718 catch (...)
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	719 {
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	720 }
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	721
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	722 Json::Value result = Json::arrayValue;
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	723 for (unsigned int i = 0; i < numberOfFrames; i++)
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	724 {
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	725 result.append(i);
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	726 }
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	727
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	728 call.GetOutput().AnswerJson(result);
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	729 }
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	730 }
03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	731
213 4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	732
215 c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	733 template <enum ImageExtractionMode mode>
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	734 static void GetImage(RestApi::GetCall& call)
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	735 {
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	736 RETRIEVE_CONTEXT(call);
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	737
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	738 std::string frameId = call.GetUriComponent("frame", "0");
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	739
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	740 unsigned int frame;
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	741 try
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	742 {
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	743 frame = boost::lexical_cast<unsigned int>(frameId);
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	744 }
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	745 catch (boost::bad_lexical_cast)
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	746 {
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	747 return;
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	748 }
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	749
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	750 std::string publicId = call.GetUriComponent("id", "");
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	751 std::string dicomContent, png;
233 c11273198cef rename Sebastien Jodogne <s.jodogne@gmail.com> parents: 232 diff changeset	752 context.ReadFile(dicomContent, publicId, FileContentType_Dicom);
215 c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	753
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	754 try
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	755 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	756 FromDcmtkBridge::ExtractPngImage(png, dicomContent, frame, mode);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	757 call.GetOutput().AnswerBuffer(png, "image/png");
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	758 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	759 catch (OrthancException& e)
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	760 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	761 if (e.GetErrorCode() == ErrorCode_ParameterOutOfRange)
215 c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	762 {
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	763 // The frame number is out of the range for this DICOM
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	764 // instance, the resource is not existent
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	765 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	766 else
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	767 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	768 std::string root = "";
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	769 for (size_t i = 1; i < call.GetFullUri().size(); i++)
215 c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	770 {
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	771 root += "../";
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	772 }
218 0200cd330582 fixes Sebastien Jodogne <s.jodogne@gmail.com> parents: 217 diff changeset	773
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	774 call.GetOutput().Redirect(root + "app/images/unsupported.png");
215 c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	775 }
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	776 }
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	777 }
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	778
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	779
216 e5d5d4a9a326 refactored upload of dicom through http Sebastien Jodogne <s.jodogne@gmail.com> parents: 215 diff changeset	780 // Upload of DICOM files through HTTP ---------------------------------------
e5d5d4a9a326 refactored upload of dicom through http Sebastien Jodogne <s.jodogne@gmail.com> parents: 215 diff changeset	781
e5d5d4a9a326 refactored upload of dicom through http Sebastien Jodogne <s.jodogne@gmail.com> parents: 215 diff changeset	782 static void UploadDicomFile(RestApi::PostCall& call)
e5d5d4a9a326 refactored upload of dicom through http Sebastien Jodogne <s.jodogne@gmail.com> parents: 215 diff changeset	783 {
e5d5d4a9a326 refactored upload of dicom through http Sebastien Jodogne <s.jodogne@gmail.com> parents: 215 diff changeset	784 RETRIEVE_CONTEXT(call);
e5d5d4a9a326 refactored upload of dicom through http Sebastien Jodogne <s.jodogne@gmail.com> parents: 215 diff changeset	785
e5d5d4a9a326 refactored upload of dicom through http Sebastien Jodogne <s.jodogne@gmail.com> parents: 215 diff changeset	786 const std::string& postData = call.GetPostBody();
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	787 if (postData.size() == 0)
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	788 {
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	789 return;
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	790 }
216 e5d5d4a9a326 refactored upload of dicom through http Sebastien Jodogne <s.jodogne@gmail.com> parents: 215 diff changeset	791
e5d5d4a9a326 refactored upload of dicom through http Sebastien Jodogne <s.jodogne@gmail.com> parents: 215 diff changeset	792 LOG(INFO) << "Receiving a DICOM file of " << postData.size() << " bytes through HTTP";
e5d5d4a9a326 refactored upload of dicom through http Sebastien Jodogne <s.jodogne@gmail.com> parents: 215 diff changeset	793
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	794 std::string publicId;
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	795 StoreStatus status = context.Store(publicId, postData);
216 e5d5d4a9a326 refactored upload of dicom through http Sebastien Jodogne <s.jodogne@gmail.com> parents: 215 diff changeset	796 Json::Value result = Json::objectValue;
e5d5d4a9a326 refactored upload of dicom through http Sebastien Jodogne <s.jodogne@gmail.com> parents: 215 diff changeset	797
e5d5d4a9a326 refactored upload of dicom through http Sebastien Jodogne <s.jodogne@gmail.com> parents: 215 diff changeset	798 if (status != StoreStatus_Failure)
e5d5d4a9a326 refactored upload of dicom through http Sebastien Jodogne <s.jodogne@gmail.com> parents: 215 diff changeset	799 {
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	800 result["ID"] = publicId;
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	801 result["Path"] = GetBasePath(ResourceType_Instance, publicId);
216 e5d5d4a9a326 refactored upload of dicom through http Sebastien Jodogne <s.jodogne@gmail.com> parents: 215 diff changeset	802 }
e5d5d4a9a326 refactored upload of dicom through http Sebastien Jodogne <s.jodogne@gmail.com> parents: 215 diff changeset	803
e5d5d4a9a326 refactored upload of dicom through http Sebastien Jodogne <s.jodogne@gmail.com> parents: 215 diff changeset	804 result["Status"] = ToString(status);
e5d5d4a9a326 refactored upload of dicom through http Sebastien Jodogne <s.jodogne@gmail.com> parents: 215 diff changeset	805 call.GetOutput().AnswerJson(result);
e5d5d4a9a326 refactored upload of dicom through http Sebastien Jodogne <s.jodogne@gmail.com> parents: 215 diff changeset	806 }
215 c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	807
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	808
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	809
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	810 // DICOM bridge -------------------------------------------------------------
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	811
230 ae2367145b49 renames Sebastien Jodogne <s.jodogne@gmail.com> parents: 229 diff changeset	812 static bool IsExistingModality(const OrthancRestApi::Modalities& modalities,
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	813 const std::string& id)
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	814 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	815 return modalities.find(id) != modalities.end();
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	816 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	817
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	818 static void ListModalities(RestApi::GetCall& call)
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	819 {
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	820 RETRIEVE_MODALITIES(call);
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	821
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	822 Json::Value result = Json::arrayValue;
230 ae2367145b49 renames Sebastien Jodogne <s.jodogne@gmail.com> parents: 229 diff changeset	823 for (OrthancRestApi::Modalities::const_iterator
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	824 it = modalities.begin(); it != modalities.end(); it++)
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	825 {
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	826 result.append(*it);
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	827 }
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	828
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	829 call.GetOutput().AnswerJson(result);
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	830 }
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	831
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	832
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	833 static void ListModalityOperations(RestApi::GetCall& call)
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	834 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	835 RETRIEVE_MODALITIES(call);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	836
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	837 std::string id = call.GetUriComponent("id", "");
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	838 if (IsExistingModality(modalities, id))
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	839 {
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	840 Json::Value result = Json::arrayValue;
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	841 result.append("find-patient");
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	842 result.append("find-study");
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	843 result.append("find-series");
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	844 result.append("find");
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	845 result.append("store");
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	846 call.GetOutput().AnswerJson(result);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	847 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	848 }
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	849
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	850
213 4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	851
285 4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 272 diff changeset	852 // Raw access to the DICOM tags of an instance ------------------------------
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 272 diff changeset	853
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 272 diff changeset	854 static void GetRawContent(RestApi::GetCall& call)
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 272 diff changeset	855 {
315 fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 314 diff changeset	856 boost::mutex::scoped_lock lock(cacheMutex_);
285 4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 272 diff changeset	857
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 272 diff changeset	858 RETRIEVE_CONTEXT(call);
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 272 diff changeset	859 std::string id = call.GetUriComponent("id", "");
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 272 diff changeset	860 ParsedDicomFile& dicom = context.GetDicomFile(id);
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 272 diff changeset	861 dicom.SendPathValue(call.GetOutput(), call.GetTrailingUri());
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 272 diff changeset	862 }
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 272 diff changeset	863
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 272 diff changeset	864
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 272 diff changeset	865
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	866 // Modification of DICOM instances ------------------------------------------
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	867
311 26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	868 namespace
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	869 {
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	870 typedef std::set<DicomTag> Removals;
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	871 typedef std::map<DicomTag, std::string> Replacements;
350 8031f9cfe7fe removal of old code Sebastien Jodogne <s.jodogne@gmail.com> parents: 349 diff changeset	872 typedef std::map< std::pair<DicomRootLevel, std::string>, std::string> UidMap;
311 26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	873 }
310 6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	874
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	875 static void ReplaceInstanceInternal(ParsedDicomFile& toModify,
310 6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	876 const Removals& removals,
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	877 const Replacements& replacements,
312 1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	878 DicomReplaceMode mode,
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	879 bool removePrivateTags)
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	880 {
312 1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	881 if (removePrivateTags)
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	882 {
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	883 toModify.RemovePrivateTags();
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	884 }
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	885
310 6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	886 for (Removals::const_iterator it = removals.begin();
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	887 it != removals.end(); it++)
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	888 {
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	889 toModify.Remove(*it);
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	890 }
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	891
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	892 for (Replacements::const_iterator it = replacements.begin();
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	893 it != replacements.end(); it++)
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	894 {
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	895 toModify.Replace(it->first, it->second, mode);
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	896 }
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	897
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	898 // A new SOP instance UID is automatically generated
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	899 std::string instanceUid = FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Instance);
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	900 toModify.Replace(DICOM_TAG_SOP_INSTANCE_UID, instanceUid, DicomReplaceMode_InsertIfAbsent);
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	901 }
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	902
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	903
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	904 static void ParseRemovals(Removals& target,
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	905 const Json::Value& removals)
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	906 {
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	907 if (!removals.isArray())
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	908 {
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	909 throw OrthancException(ErrorCode_BadRequest);
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	910 }
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	911
310 6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	912 target.clear();
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	913
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	914 for (Json::Value::ArrayIndex i = 0; i < removals.size(); i++)
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	915 {
357 8d3a0db39967 fix of standalone builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 351 diff changeset	916 std::string name = removals[i].asString();
8d3a0db39967 fix of standalone builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 351 diff changeset	917 DicomTag tag = FromDcmtkBridge::ParseTag(name);
310 6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	918 target.insert(tag);
357 8d3a0db39967 fix of standalone builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 351 diff changeset	919
8d3a0db39967 fix of standalone builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 351 diff changeset	920 VLOG(1) << "Removal: " << name << " " << tag << std::endl;
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	921 }
310 6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	922 }
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	923
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	924
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	925 static void ParseReplacements(Replacements& target,
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	926 const Json::Value& replacements)
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	927 {
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	928 if (!replacements.isObject())
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	929 {
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	930 throw OrthancException(ErrorCode_BadRequest);
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	931 }
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	932
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	933 target.clear();
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	934
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	935 Json::Value::Members members = replacements.getMemberNames();
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	936 for (size_t i = 0; i < members.size(); i++)
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	937 {
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	938 const std::string& name = members[i];
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	939 std::string value = replacements[name].asString();
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	940
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	941 DicomTag tag = FromDcmtkBridge::ParseTag(name);
310 6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	942 target[tag] = value;
357 8d3a0db39967 fix of standalone builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 351 diff changeset	943
8d3a0db39967 fix of standalone builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 351 diff changeset	944 VLOG(1) << "Replacement: " << name << " " << tag << " == " << value << std::endl;
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	945 }
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	946 }
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	947
310 6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	948
311 26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	949 static std::string GeneratePatientName(ServerContext& context)
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	950 {
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	951 uint64_t seq = context.GetIndex().IncrementGlobalSequence(GlobalProperty_AnonymizationSequence);
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	952 return "Anonymized" + boost::lexical_cast<std::string>(seq);
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	953 }
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	954
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	955
310 6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	956 static void SetupAnonymization(Removals& removals,
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	957 Replacements& replacements)
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	958 {
311 26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	959 // This is Table E.1-1 from PS 3.15-2008 - DICOM Part 15: Security and System Management Profiles
310 6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	960 removals.insert(DicomTag(0x0008, 0x0014)); // Instance Creator UID
311 26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	961 //removals.insert(DicomTag(0x0008, 0x0018)); // SOP Instance UID => set by ReplaceInstanceInternal()
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	962 removals.insert(DicomTag(0x0008, 0x0050)); // Accession Number
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	963 removals.insert(DicomTag(0x0008, 0x0080)); // Institution Name
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	964 removals.insert(DicomTag(0x0008, 0x0081)); // Institution Address
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	965 removals.insert(DicomTag(0x0008, 0x0090)); // Referring Physician's Name
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	966 removals.insert(DicomTag(0x0008, 0x0092)); // Referring Physician's Address
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	967 removals.insert(DicomTag(0x0008, 0x0094)); // Referring Physician's Telephone Numbers
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	968 removals.insert(DicomTag(0x0008, 0x1010)); // Station Name
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	969 removals.insert(DicomTag(0x0008, 0x1030)); // Study Description
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	970 removals.insert(DicomTag(0x0008, 0x103e)); // Series Description
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	971 removals.insert(DicomTag(0x0008, 0x1040)); // Institutional Department Name
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	972 removals.insert(DicomTag(0x0008, 0x1048)); // Physician(s) of Record
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	973 removals.insert(DicomTag(0x0008, 0x1050)); // Performing Physicians' Name
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	974 removals.insert(DicomTag(0x0008, 0x1060)); // Name of Physician(s) Reading Study
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	975 removals.insert(DicomTag(0x0008, 0x1070)); // Operators' Name
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	976 removals.insert(DicomTag(0x0008, 0x1080)); // Admitting Diagnoses Description
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	977 removals.insert(DicomTag(0x0008, 0x1155)); // Referenced SOP Instance UID
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	978 removals.insert(DicomTag(0x0008, 0x2111)); // Derivation Description
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	979 removals.insert(DicomTag(0x0010, 0x0010)); // Patient's Name
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	980 removals.insert(DicomTag(0x0010, 0x0020)); // Patient ID
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	981 removals.insert(DicomTag(0x0010, 0x0030)); // Patient's Birth Date
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	982 removals.insert(DicomTag(0x0010, 0x0032)); // Patient's Birth Time
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	983 removals.insert(DicomTag(0x0010, 0x0040)); // Patient's Sex
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	984 removals.insert(DicomTag(0x0010, 0x1000)); // Other Patient Ids
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	985 removals.insert(DicomTag(0x0010, 0x1001)); // Other Patient Names
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	986 removals.insert(DicomTag(0x0010, 0x1010)); // Patient's Age
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	987 removals.insert(DicomTag(0x0010, 0x1020)); // Patient's Size
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	988 removals.insert(DicomTag(0x0010, 0x1030)); // Patient's Weight
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	989 removals.insert(DicomTag(0x0010, 0x1090)); // Medical Record Locator
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	990 removals.insert(DicomTag(0x0010, 0x2160)); // Ethnic Group
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	991 removals.insert(DicomTag(0x0010, 0x2180)); // Occupation
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	992 removals.insert(DicomTag(0x0010, 0x21b0)); // Additional Patient's History
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	993 removals.insert(DicomTag(0x0010, 0x4000)); // Patient Comments
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	994 removals.insert(DicomTag(0x0018, 0x1000)); // Device Serial Number
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	995 removals.insert(DicomTag(0x0018, 0x1030)); // Protocol Name
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	996 //removals.insert(DicomTag(0x0020, 0x000d)); // Study Instance UID => generated below
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	997 //removals.insert(DicomTag(0x0020, 0x000e)); // Series Instance UID => generated below
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	998 removals.insert(DicomTag(0x0020, 0x0010)); // Study ID
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	999 removals.insert(DicomTag(0x0020, 0x0052)); // Frame of Reference UID
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1000 removals.insert(DicomTag(0x0020, 0x0200)); // Synchronization Frame of Reference UID
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1001 removals.insert(DicomTag(0x0020, 0x4000)); // Image Comments
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1002 removals.insert(DicomTag(0x0040, 0x0275)); // Request Attributes Sequence
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1003 removals.insert(DicomTag(0x0040, 0xa124)); // UID
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1004 removals.insert(DicomTag(0x0040, 0xa730)); // Content Sequence
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1005 removals.insert(DicomTag(0x0088, 0x0140)); // Storage Media File-set UID
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1006 removals.insert(DicomTag(0x3006, 0x0024)); // Referenced Frame of Reference UID
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1007 removals.insert(DicomTag(0x3006, 0x00c2)); // Related Frame of Reference UID
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1008
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1009 // Some more removals (from the experience of DICOM files at the CHU of Liege)
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1010 removals.insert(DicomTag(0x0010, 0x1040)); // Patient's Address
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1011 removals.insert(DicomTag(0x0032, 0x1032)); // Requesting Physician
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1012
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1013 // Set the DeidentificationMethod tag
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1014 replacements.insert(std::make_pair(DicomTag(0x0012, 0x0063), "Orthanc " ORTHANC_VERSION " - PS 3.15-2008 Table E.1-1"));
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1015
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1016 // Set the PatientIdentityRemoved
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1017 replacements.insert(std::make_pair(DicomTag(0x0012, 0x0062), "YES"));
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1018
321 47a709e22d1f fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 317 diff changeset	1019 // Generate random study UID if not specified
47a709e22d1f fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 317 diff changeset	1020 if (replacements.find(DICOM_TAG_STUDY_INSTANCE_UID) == replacements.end())
47a709e22d1f fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 317 diff changeset	1021 {
47a709e22d1f fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 317 diff changeset	1022 replacements.insert(std::make_pair(DICOM_TAG_STUDY_INSTANCE_UID,
47a709e22d1f fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 317 diff changeset	1023 FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Study)));
47a709e22d1f fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 317 diff changeset	1024 }
47a709e22d1f fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 317 diff changeset	1025
47a709e22d1f fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 317 diff changeset	1026 // Generate random series UID if not specified
47a709e22d1f fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 317 diff changeset	1027 if (replacements.find(DICOM_TAG_SERIES_INSTANCE_UID) == replacements.end())
47a709e22d1f fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 317 diff changeset	1028 {
47a709e22d1f fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 317 diff changeset	1029 replacements.insert(std::make_pair(DICOM_TAG_SERIES_INSTANCE_UID,
47a709e22d1f fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 317 diff changeset	1030 FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Series)));
47a709e22d1f fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 317 diff changeset	1031 }
310 6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1032 }
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1033
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1034
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1035 static bool ParseModifyRequest(Removals& removals,
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1036 Replacements& replacements,
312 1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1037 bool& removePrivateTags,
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1038 const RestApi::PostCall& call)
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1039 {
312 1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1040 removePrivateTags = false;
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1041 Json::Value request;
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1042 if (call.ParseJsonRequest(request) &&
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1043 request.isObject())
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1044 {
310 6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1045 Json::Value removalsPart = Json::arrayValue;
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1046 Json::Value replacementsPart = Json::objectValue;
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1047
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1048 if (request.isMember("Remove"))
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1049 {
310 6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1050 removalsPart = request["Remove"];
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1051 }
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1052
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1053 if (request.isMember("Replace"))
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1054 {
310 6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1055 replacementsPart = request["Replace"];
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1056 }
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1057
312 1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1058 if (request.isMember("RemovePrivateTags"))
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1059 {
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1060 removePrivateTags = true;
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1061 }
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1062
310 6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1063 ParseRemovals(removals, removalsPart);
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1064 ParseReplacements(replacements, replacementsPart);
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1065
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1066 return true;
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1067 }
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1068 else
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1069 {
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1070 return false;
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1071 }
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1072 }
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1073
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1074
311 26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1075 static bool ParseAnonymizationRequest(Removals& removals,
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1076 Replacements& replacements,
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1077 bool& removePrivateTags,
316 d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1078 RestApi::PostCall& call)
311 26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1079 {
316 d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1080 RETRIEVE_CONTEXT(call);
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1081
311 26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1082 removePrivateTags = true;
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1083
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1084 Json::Value request;
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1085 if (call.ParseJsonRequest(request) &&
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1086 request.isObject())
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1087 {
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1088 Json::Value keepPart = Json::arrayValue;
312 1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1089 Json::Value removalsPart = Json::arrayValue;
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1090 Json::Value replacementsPart = Json::objectValue;
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1091
311 26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1092 if (request.isMember("Keep"))
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1093 {
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1094 keepPart = request["Keep"];
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1095 }
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1096
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1097 if (request.isMember("KeepPrivateTags"))
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1098 {
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1099 removePrivateTags = false;
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1100 }
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1101
312 1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1102 if (request.isMember("Replace"))
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1103 {
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1104 replacementsPart = request["Replace"];
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1105 }
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1106
311 26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1107 Removals toKeep;
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1108 ParseRemovals(toKeep, keepPart);
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1109
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1110 SetupAnonymization(removals, replacements);
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1111
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1112 for (Removals::iterator it = toKeep.begin(); it != toKeep.end(); it++)
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1113 {
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1114 removals.erase(*it);
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1115 }
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1116
312 1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1117 Removals additionalRemovals;
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1118 ParseRemovals(additionalRemovals, removalsPart);
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1119
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1120 for (Removals::iterator it = additionalRemovals.begin();
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1121 it != additionalRemovals.end(); it++)
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1122 {
321 47a709e22d1f fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 317 diff changeset	1123 removals.insert(*it);
312 1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1124 }
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1125
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1126 ParseReplacements(replacements, replacementsPart);
1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1127
316 d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1128 // Generate random Patient's Name if none is specified
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1129 if (replacements.find(DicomTag(0x0010, 0x0010)) == replacements.end())
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1130 {
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1131 replacements.insert(std::make_pair(DicomTag(0x0010, 0x0010), GeneratePatientName(context)));
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1132 }
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1133
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1134 // Generate random Patient's ID if none is specified
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1135 if (replacements.find(DICOM_TAG_PATIENT_ID) == replacements.end())
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1136 {
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1137 replacements.insert(std::make_pair(DICOM_TAG_PATIENT_ID,
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1138 FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Patient)));
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1139 }
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1140
311 26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1141 return true;
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1142 }
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1143 else
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1144 {
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1145 return false;
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1146 }
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1147 }
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1148
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1149
348 1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1150 static void AnonymizeOrModifyInstance(Removals& removals,
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1151 Replacements& replacements,
314 4f17834a50b6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 313 diff changeset	1152 bool removePrivateTags,
4f17834a50b6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 313 diff changeset	1153 RestApi::PostCall& call)
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 299 diff changeset	1154 {
315 fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 314 diff changeset	1155 boost::mutex::scoped_lock lock(cacheMutex_);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 299 diff changeset	1156 RETRIEVE_CONTEXT(call);
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 299 diff changeset	1157
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 299 diff changeset	1158 std::string id = call.GetUriComponent("id", "");
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 299 diff changeset	1159 ParsedDicomFile& dicom = context.GetDicomFile(id);
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 299 diff changeset	1160
314 4f17834a50b6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 313 diff changeset	1161 std::auto_ptr<ParsedDicomFile> modified(dicom.Clone());
4f17834a50b6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 313 diff changeset	1162 ReplaceInstanceInternal(*modified, removals, replacements, DicomReplaceMode_InsertIfAbsent, removePrivateTags);
4f17834a50b6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 313 diff changeset	1163 modified->Answer(call.GetOutput());
4f17834a50b6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 313 diff changeset	1164 }
4f17834a50b6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 313 diff changeset	1165
4f17834a50b6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 313 diff changeset	1166
349 c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1167 static bool RetrieveMappedUid(ParsedDicomFile& dicom,
348 1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1168 DicomRootLevel level,
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1169 Replacements& replacements,
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1170 UidMap& uidMap)
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1171 {
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1172 std::auto_ptr<DicomTag> tag;
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1173 if (level == DicomRootLevel_Series)
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1174 {
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1175 tag.reset(new DicomTag(DICOM_TAG_SERIES_INSTANCE_UID));
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1176 }
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1177 else
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1178 {
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1179 assert(level == DicomRootLevel_Study);
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1180 tag.reset(new DicomTag(DICOM_TAG_STUDY_INSTANCE_UID));
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1181 }
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1182
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1183 std::string original;
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1184 if (!dicom.GetTagValue(original, *tag))
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1185 {
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1186 throw OrthancException(ErrorCode_InternalError);
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1187 }
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1188
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1189 std::string mapped;
349 c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1190 bool isNew;
348 1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1191
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1192 UidMap::const_iterator previous = uidMap.find(std::make_pair(level, original));
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1193 if (previous == uidMap.end())
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1194 {
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1195 mapped = FromDcmtkBridge::GenerateUniqueIdentifier(level);
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1196 uidMap.insert(std::make_pair(std::make_pair(level, original), mapped));
349 c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1197 isNew = true;
348 1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1198 }
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1199 else
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1200 {
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1201 mapped = previous->second;
349 c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1202 isNew = false;
348 1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1203 }
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1204
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1205 replacements[*tag] = mapped;
349 c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1206 return isNew;
348 1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1207 }
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1208
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1209
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1210 static void AnonymizeOrModifyResource(Removals& removals,
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1211 Replacements& replacements,
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1212 bool removePrivateTags,
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1213 MetadataType metadataType,
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1214 ChangeType changeType,
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1215 ResourceType resourceType,
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1216 RestApi::PostCall& call)
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1217 {
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1218 typedef std::list<std::string> Instances;
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1219
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1220 bool isFirst = true;
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1221 Json::Value result(Json::objectValue);
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1222
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1223 boost::mutex::scoped_lock lock(cacheMutex_);
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1224 RETRIEVE_CONTEXT(call);
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1225
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1226 Instances instances;
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1227 std::string id = call.GetUriComponent("id", "");
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1228 context.GetIndex().GetChildInstances(instances, id);
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1229
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1230 if (instances.size() == 0)
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1231 {
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1232 return;
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1233 }
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1234
349 c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1235
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1236 /**
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1237 * Loop over all the instances of the resource.
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1238 **/
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1239
348 1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1240 UidMap uidMap;
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1241 for (Instances::const_iterator it = instances.begin();
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1242 it != instances.end(); it++)
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1243 {
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1244 LOG(INFO) << "Modifying instance " << *it;
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1245 ParsedDicomFile& original = context.GetDicomFile(*it);
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1246
349 c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1247 bool isNewSeries = RetrieveMappedUid(original, DicomRootLevel_Series, replacements, uidMap);
348 1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1248
349 c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1249 bool isNewStudy = false;
348 1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1250 if (resourceType == ResourceType_Study \|\|
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1251 resourceType == ResourceType_Patient)
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1252 {
349 c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1253 isNewStudy = RetrieveMappedUid(original, DicomRootLevel_Study, replacements, uidMap);
348 1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1254 }
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1255
349 c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1256 /**
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1257 * Compute the resulting DICOM instance and store it into the Orthanc store.
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1258 **/
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1259
348 1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1260 std::auto_ptr<ParsedDicomFile> modified(original.Clone());
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1261 ReplaceInstanceInternal(*modified, removals, replacements, DicomReplaceMode_InsertIfAbsent, removePrivateTags);
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1262
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1263 std::string modifiedInstance;
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1264 if (context.Store(modifiedInstance, modified->GetDicom()) != StoreStatus_Success)
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1265 {
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1266 LOG(ERROR) << "Error while storing a modified instance " << *it;
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1267 return;
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1268 }
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1269
349 c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1270
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1271 /**
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1272 * Record metadata information (AnonimizedFrom/ModifiedFrom).
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1273 **/
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1274
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1275 DicomInstanceHasher modifiedHasher = modified->GetHasher();
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1276 DicomInstanceHasher originalHasher = original.GetHasher();
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1277
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1278 if (isNewSeries)
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1279 {
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1280 context.GetIndex().SetMetadata(modifiedHasher.HashSeries(),
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1281 metadataType, originalHasher.HashSeries());
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1282 }
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1283
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1284 if (isNewStudy)
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1285 {
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1286 context.GetIndex().SetMetadata(modifiedHasher.HashStudy(),
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1287 metadataType, originalHasher.HashStudy());
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1288 }
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1289
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1290 assert(*it == originalHasher.HashInstance());
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1291 assert(modifiedInstance == modifiedHasher.HashInstance());
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1292 context.GetIndex().SetMetadata(modifiedInstance, metadataType, *it);
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1293
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1294
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1295 /**
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1296 * Compute the JSON object that is returned by the REST call.
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1297 **/
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1298
348 1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1299 if (isFirst)
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1300 {
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1301 std::string newId;
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1302
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1303 switch (resourceType)
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1304 {
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1305 case ResourceType_Series:
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1306 newId = modifiedHasher.HashSeries();
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1307 break;
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1308
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1309 case ResourceType_Study:
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1310 newId = modifiedHasher.HashStudy();
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1311 break;
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1312
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1313 case ResourceType_Patient:
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1314 newId = modifiedHasher.HashPatient();
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1315 break;
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1316
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1317 default:
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1318 throw OrthancException(ErrorCode_InternalError);
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1319 }
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1320
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1321 result["Type"] = ToString(resourceType);
349 c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1322 result["ID"] = newId;
348 1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1323 result["Path"] = GetBasePath(resourceType, newId);
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1324 result["PatientID"] = modifiedHasher.HashPatient();
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1325 isFirst = false;
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1326 }
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1327 }
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1328
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1329 call.GetOutput().AnswerJson(result);
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1330 }
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1331
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1332
1082e8121d10 refactoring anonymization/modification Sebastien Jodogne <s.jodogne@gmail.com> parents: 344 diff changeset	1333
314 4f17834a50b6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 313 diff changeset	1334 static void ModifyInstance(RestApi::PostCall& call)
4f17834a50b6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 313 diff changeset	1335 {
310 6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1336 Removals removals;
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1337 Replacements replacements;
312 1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1338 bool removePrivateTags;
310 6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1339
312 1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1340 if (ParseModifyRequest(removals, replacements, removePrivateTags, call))
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1341 {
314 4f17834a50b6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 313 diff changeset	1342 AnonymizeOrModifyInstance(removals, replacements, removePrivateTags, call);
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1343 }
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1344 }
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1345
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1346
311 26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1347 static void AnonymizeInstance(RestApi::PostCall& call)
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1348 {
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1349 Removals removals;
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1350 Replacements replacements;
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1351 bool removePrivateTags;
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1352
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1353 if (ParseAnonymizationRequest(removals, replacements, removePrivateTags, call))
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1354 {
314 4f17834a50b6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 313 diff changeset	1355 AnonymizeOrModifyInstance(removals, replacements, removePrivateTags, call);
311 26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1356 }
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1357 }
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1358
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1359
308 fbf2b2282086 inplace modification of series and studies Sebastien Jodogne <s.jodogne@gmail.com> parents: 307 diff changeset	1360 static void ModifySeriesInplace(RestApi::PostCall& call)
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1361 {
310 6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1362 Removals removals;
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1363 Replacements replacements;
312 1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1364 bool removePrivateTags;
308 fbf2b2282086 inplace modification of series and studies Sebastien Jodogne <s.jodogne@gmail.com> parents: 307 diff changeset	1365
312 1642a354fec8 flexible Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1366 if (ParseModifyRequest(removals, replacements, removePrivateTags, call))
308 fbf2b2282086 inplace modification of series and studies Sebastien Jodogne <s.jodogne@gmail.com> parents: 307 diff changeset	1367 {
349 c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1368 AnonymizeOrModifyResource(removals, replacements, removePrivateTags,
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1369 MetadataType_ModifiedFrom, ChangeType_ModifiedSeries,
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1370 ResourceType_Series, call);
316 d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1371 }
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1372 }
315 fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 314 diff changeset	1373
308 fbf2b2282086 inplace modification of series and studies Sebastien Jodogne <s.jodogne@gmail.com> parents: 307 diff changeset	1374
316 d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1375 static void AnonymizeSeriesInplace(RestApi::PostCall& call)
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1376 {
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1377 Removals removals;
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1378 Replacements replacements;
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1379 bool removePrivateTags;
308 fbf2b2282086 inplace modification of series and studies Sebastien Jodogne <s.jodogne@gmail.com> parents: 307 diff changeset	1380
316 d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1381 if (ParseAnonymizationRequest(removals, replacements, removePrivateTags, call))
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1382 {
349 c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1383 AnonymizeOrModifyResource(removals, replacements, removePrivateTags,
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1384 MetadataType_AnonymizedFrom, ChangeType_AnonymizedSeries,
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1385 ResourceType_Series, call);
308 fbf2b2282086 inplace modification of series and studies Sebastien Jodogne <s.jodogne@gmail.com> parents: 307 diff changeset	1386 }
fbf2b2282086 inplace modification of series and studies Sebastien Jodogne <s.jodogne@gmail.com> parents: 307 diff changeset	1387 }
fbf2b2282086 inplace modification of series and studies Sebastien Jodogne <s.jodogne@gmail.com> parents: 307 diff changeset	1388
fbf2b2282086 inplace modification of series and studies Sebastien Jodogne <s.jodogne@gmail.com> parents: 307 diff changeset	1389
316 d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1390 static void ModifyStudyInplace(RestApi::PostCall& call)
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1391 {
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1392 Removals removals;
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1393 Replacements replacements;
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1394 bool removePrivateTags;
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1395
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1396 if (ParseModifyRequest(removals, replacements, removePrivateTags, call))
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1397 {
349 c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1398 AnonymizeOrModifyResource(removals, replacements, removePrivateTags,
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1399 MetadataType_ModifiedFrom, ChangeType_ModifiedStudy,
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1400 ResourceType_Study, call);
316 d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1401 }
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1402 }
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1403
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1404
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1405 static void AnonymizeStudyInplace(RestApi::PostCall& call)
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1406 {
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1407 Removals removals;
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1408 Replacements replacements;
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1409 bool removePrivateTags;
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1410
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1411 if (ParseAnonymizationRequest(removals, replacements, removePrivateTags, call))
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1412 {
349 c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1413 AnonymizeOrModifyResource(removals, replacements, removePrivateTags,
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1414 MetadataType_AnonymizedFrom, ChangeType_AnonymizedStudy,
c5edf0cc6e95 switch to refactored version Sebastien Jodogne <s.jodogne@gmail.com> parents: 348 diff changeset	1415 ResourceType_Study, call);
316 d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1416 }
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1417 }
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1418
308 fbf2b2282086 inplace modification of series and studies Sebastien Jodogne <s.jodogne@gmail.com> parents: 307 diff changeset	1419
351 64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1420 static void ModifyPatientInplace(RestApi::PostCall& call)
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1421 {
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1422 Removals removals;
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1423 Replacements replacements;
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1424 bool removePrivateTags;
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1425
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1426 if (ParseModifyRequest(removals, replacements, removePrivateTags, call))
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1427 {
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1428 AnonymizeOrModifyResource(removals, replacements, removePrivateTags,
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1429 MetadataType_ModifiedFrom, ChangeType_ModifiedPatient,
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1430 ResourceType_Patient, call);
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1431 }
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1432 }
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1433
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1434
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1435 static void AnonymizePatientInplace(RestApi::PostCall& call)
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1436 {
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1437 Removals removals;
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1438 Replacements replacements;
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1439 bool removePrivateTags;
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1440
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1441 if (ParseAnonymizationRequest(removals, replacements, removePrivateTags, call))
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1442 {
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1443 AnonymizeOrModifyResource(removals, replacements, removePrivateTags,
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1444 MetadataType_AnonymizedFrom, ChangeType_AnonymizedPatient,
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1445 ResourceType_Patient, call);
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1446 }
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1447 }
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1448
64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1449
285 4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 272 diff changeset	1450
213 4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	1451 // Registration of the various REST handlers --------------------------------
4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	1452
230 ae2367145b49 renames Sebastien Jodogne <s.jodogne@gmail.com> parents: 229 diff changeset	1453 OrthancRestApi::OrthancRestApi(ServerContext& context) :
224 4eb0c7ce86c9 refactoring for store Sebastien Jodogne <s.jodogne@gmail.com> parents: 218 diff changeset	1454 context_(context)
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1455 {
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1456 GetListOfDicomModalities(modalities_);
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1457
211 b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	1458 Register("/", ServeRoot);
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1459 Register("/system", GetSystemInformation);
238 e4148b0ab1d0 statistics URI Sebastien Jodogne <s.jodogne@gmail.com> parents: 237 diff changeset	1460 Register("/statistics", GetStatistics);
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1461 Register("/changes", GetChanges);
237 16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	1462 Register("/exports", GetExports);
211 b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	1463
216 e5d5d4a9a326 refactored upload of dicom through http Sebastien Jodogne <s.jodogne@gmail.com> parents: 215 diff changeset	1464 Register("/instances", UploadDicomFile);
211 b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	1465 Register("/instances", ListResources<ResourceType_Instance>);
b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	1466 Register("/patients", ListResources<ResourceType_Patient>);
b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	1467 Register("/series", ListResources<ResourceType_Series>);
b7aea293b965 list of resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 210 diff changeset	1468 Register("/studies", ListResources<ResourceType_Study>);
212 f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	1469
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	1470 Register("/instances/{id}", DeleteSingleResource<ResourceType_Instance>);
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	1471 Register("/instances/{id}", GetSingleResource<ResourceType_Instance>);
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	1472 Register("/patients/{id}", DeleteSingleResource<ResourceType_Patient>);
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	1473 Register("/patients/{id}", GetSingleResource<ResourceType_Patient>);
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	1474 Register("/series/{id}", DeleteSingleResource<ResourceType_Series>);
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	1475 Register("/series/{id}", GetSingleResource<ResourceType_Series>);
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	1476 Register("/studies/{id}", DeleteSingleResource<ResourceType_Study>);
f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 211 diff changeset	1477 Register("/studies/{id}", GetSingleResource<ResourceType_Study>);
250 f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	1478
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	1479 Register("/patients/{id}/archive", GetArchive<ResourceType_Patient>);
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	1480 Register("/studies/{id}/archive", GetArchive<ResourceType_Study>);
f23318b11b39 creation of zip files Sebastien Jodogne <s.jodogne@gmail.com> parents: 249 diff changeset	1481 Register("/series/{id}/archive", GetArchive<ResourceType_Series>);
213 4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	1482
272 337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	1483 Register("/patients/{id}/protected", IsProtectedPatient);
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 253 diff changeset	1484 Register("/patients/{id}/protected", SetPatientProtection);
213 4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	1485 Register("/instances/{id}/file", GetInstanceFile);
4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	1486 Register("/instances/{id}/tags", GetInstanceTags<false>);
4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	1487 Register("/instances/{id}/simplified-tags", GetInstanceTags<true>);
214 03817919169b list of frames Sebastien Jodogne <s.jodogne@gmail.com> parents: 213 diff changeset	1488 Register("/instances/{id}/frames", ListFrames);
285 4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 272 diff changeset	1489 Register("/instances/{id}/content/*", GetRawContent);
213 4ce7fdcc8879 access to tags, simplified-tags and file of an instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 212 diff changeset	1490
215 c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	1491 Register("/instances/{id}/frames/{frame}/preview", GetImage<ImageExtractionMode_Preview>);
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	1492 Register("/instances/{id}/frames/{frame}/image-uint8", GetImage<ImageExtractionMode_UInt8>);
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	1493 Register("/instances/{id}/frames/{frame}/image-uint16", GetImage<ImageExtractionMode_UInt16>);
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	1494 Register("/instances/{id}/preview", GetImage<ImageExtractionMode_Preview>);
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	1495 Register("/instances/{id}/image-uint8", GetImage<ImageExtractionMode_UInt8>);
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	1496 Register("/instances/{id}/image-uint16", GetImage<ImageExtractionMode_UInt16>);
c07170f3f4f7 refactoring of access to images in REST Sebastien Jodogne <s.jodogne@gmail.com> parents: 214 diff changeset	1497
227 209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	1498 Register("/modalities", ListModalities);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	1499 Register("/modalities/{id}", ListModalityOperations);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	1500 Register("/modalities/{id}/find-patient", DicomFindPatient);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	1501 Register("/modalities/{id}/find-study", DicomFindStudy);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	1502 Register("/modalities/{id}/find-series", DicomFindSeries);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	1503 Register("/modalities/{id}/find", DicomFind);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	1504 Register("/modalities/{id}/store", DicomStore);
209ca3f6db62 dicom-scu from rest Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	1505
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1506 Register("/instances/{id}/modify", ModifyInstance);
308 fbf2b2282086 inplace modification of series and studies Sebastien Jodogne <s.jodogne@gmail.com> parents: 307 diff changeset	1507 Register("/series/{id}/modify", ModifySeriesInplace);
fbf2b2282086 inplace modification of series and studies Sebastien Jodogne <s.jodogne@gmail.com> parents: 307 diff changeset	1508 Register("/studies/{id}/modify", ModifyStudyInplace);
351 64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1509 Register("/patients/{id}/modify", ModifyPatientInplace);
311 26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1510
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1511 Register("/instances/{id}/anonymize", AnonymizeInstance);
316 d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1512 Register("/series/{id}/anonymize", AnonymizeSeriesInplace);
d526ac73c886 anonymization of studies and series Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	1513 Register("/studies/{id}/anonymize", AnonymizeStudyInplace);
351 64625960af22 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 350 diff changeset	1514 Register("/patients/{id}/anonymize", AnonymizePatientInplace);
342 a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	1515
a58a8be26aff generation of random uid in the rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 321 diff changeset	1516 Register("/tools/generate-uid", GenerateUid);
210 96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1517 }
96b7918a6a18 start of the refactoring of the Orthanc REST API Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1518 }

Mercurial > hg > orthanc

annotate OrthancServer/OrthancRestApi.cpp @ 357:8d3a0db39967