Mercurial > hg > orthanc
annotate OrthancServer/ParsedDicomFile.cpp @ 1902:8b0ee8d5e6d0
Refactoring leading to speedups with custom image decoders
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
|---|---|
| date | Tue, 05 Jan 2016 13:26:51 +0100 |
| parents | b1291df2f780 |
| children | 41e402cd7b3a |
| rev | line source |
|---|---|
| 790 | 1 /** |
| 2 * Orthanc - A Lightweight, RESTful DICOM Store | |
| 1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
|
1288
6e7e5ed91c2d
upgrade to year 2015
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1160
diff
changeset
|
4 * Department, University Hospital of Liege, Belgium |
| 790 | 5 * |
| 6 * This program is free software: you can redistribute it and/or | |
| 7 * modify it under the terms of the GNU General Public License as | |
| 8 * published by the Free Software Foundation, either version 3 of the | |
| 9 * License, or (at your option) any later version. | |
| 10 * | |
| 11 * In addition, as a special exception, the copyright holders of this | |
| 12 * program give permission to link the code of its release with the | |
| 13 * OpenSSL project's "OpenSSL" library (or with modified versions of it | |
| 14 * that use the same license as the "OpenSSL" library), and distribute | |
| 15 * the linked executables. You must obey the GNU General Public License | |
| 16 * in all respects for all of the code used other than "OpenSSL". If you | |
| 17 * modify file(s) with this exception, you may extend this exception to | |
| 18 * your version of the file(s), but you are not obligated to do so. If | |
| 19 * you do not wish to do so, delete this exception statement from your | |
| 20 * version. If you delete this exception statement from all source files | |
| 21 * in the program, then also delete it here. | |
| 22 * | |
| 23 * This program is distributed in the hope that it will be useful, but | |
| 24 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
| 26 * General Public License for more details. | |
| 27 * | |
| 28 * You should have received a copy of the GNU General Public License | |
| 29 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
| 30 **/ | |
| 31 | |
| 32 | |
| 33 | |
| 34 /*========================================================================= | |
| 35 | |
| 36 This file is based on portions of the following project: | |
| 37 | |
| 38 Program: GDCM (Grassroots DICOM). A DICOM library | |
| 39 Module: http://gdcm.sourceforge.net/Copyright.html | |
| 40 | |
| 41 Copyright (c) 2006-2011 Mathieu Malaterre | |
| 42 Copyright (c) 1993-2005 CREATIS | |
| 43 (CREATIS = Centre de Recherche et d'Applications en Traitement de l'Image) | |
| 44 All rights reserved. | |
| 45 | |
| 46 Redistribution and use in source and binary forms, with or without | |
| 47 modification, are permitted provided that the following conditions are met: | |
| 48 | |
| 49 * Redistributions of source code must retain the above copyright notice, | |
| 50 this list of conditions and the following disclaimer. | |
| 51 | |
| 52 * Redistributions in binary form must reproduce the above copyright notice, | |
| 53 this list of conditions and the following disclaimer in the documentation | |
| 54 and/or other materials provided with the distribution. | |
| 55 | |
| 56 * Neither name of Mathieu Malaterre, or CREATIS, nor the names of any | |
| 57 contributors (CNRS, INSERM, UCB, Universite Lyon I), may be used to | |
| 58 endorse or promote products derived from this software without specific | |
| 59 prior written permission. | |
| 60 | |
| 61 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ``AS IS'' | |
| 62 AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE | |
| 63 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE | |
| 64 ARE DISCLAIMED. IN NO EVENT SHALL THE AUTHORS OR CONTRIBUTORS BE LIABLE FOR | |
| 65 ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL | |
| 66 DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR | |
| 67 SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER | |
| 68 CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, | |
| 69 OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE | |
| 70 OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. | |
| 71 | |
| 72 =========================================================================*/ | |
| 73 | |
| 74 | |
|
831
84513f2ee1f3
pch for unit tests and server
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
824
diff
changeset
|
75 #include "PrecompiledHeadersServer.h" |
|
824
a811bdf8b8eb
precompiled headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
817
diff
changeset
|
76 |
| 790 | 77 #ifndef NOMINMAX |
| 78 #define NOMINMAX | |
| 79 #endif | |
| 80 | |
| 81 #include "ParsedDicomFile.h" | |
| 82 | |
|
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
83 #include "OrthancInitialization.h" |
|
1160
80671157d051
generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1113
diff
changeset
|
84 #include "ServerToolbox.h" |
| 790 | 85 #include "FromDcmtkBridge.h" |
| 86 #include "ToDcmtkBridge.h" | |
|
1781
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
87 #include "../Core/Images/JpegReader.h" |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
88 #include "../Core/Images/PngReader.h" |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
89 #include "../Core/Logging.h" |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
90 #include "../Core/OrthancException.h" |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
91 #include "../Core/Toolbox.h" |
| 790 | 92 #include "../Core/Uuid.h" |
| 93 | |
| 94 #include <list> | |
| 95 #include <limits> | |
| 96 | |
| 97 #include <boost/lexical_cast.hpp> | |
| 98 | |
| 99 #include <dcmtk/dcmdata/dcchrstr.h> | |
| 100 #include <dcmtk/dcmdata/dcdicent.h> | |
| 101 #include <dcmtk/dcmdata/dcdict.h> | |
| 102 #include <dcmtk/dcmdata/dcfilefo.h> | |
| 103 #include <dcmtk/dcmdata/dcistrmb.h> | |
| 104 #include <dcmtk/dcmdata/dcuid.h> | |
| 105 #include <dcmtk/dcmdata/dcmetinf.h> | |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
106 #include <dcmtk/dcmdata/dcdeftag.h> |
| 790 | 107 |
| 108 #include <dcmtk/dcmdata/dcvrae.h> | |
| 109 #include <dcmtk/dcmdata/dcvras.h> | |
| 110 #include <dcmtk/dcmdata/dcvrcs.h> | |
| 111 #include <dcmtk/dcmdata/dcvrda.h> | |
| 112 #include <dcmtk/dcmdata/dcvrds.h> | |
| 113 #include <dcmtk/dcmdata/dcvrdt.h> | |
| 114 #include <dcmtk/dcmdata/dcvrfd.h> | |
| 115 #include <dcmtk/dcmdata/dcvrfl.h> | |
| 116 #include <dcmtk/dcmdata/dcvris.h> | |
| 117 #include <dcmtk/dcmdata/dcvrlo.h> | |
| 118 #include <dcmtk/dcmdata/dcvrlt.h> | |
| 119 #include <dcmtk/dcmdata/dcvrpn.h> | |
| 120 #include <dcmtk/dcmdata/dcvrsh.h> | |
| 121 #include <dcmtk/dcmdata/dcvrsl.h> | |
| 122 #include <dcmtk/dcmdata/dcvrss.h> | |
| 123 #include <dcmtk/dcmdata/dcvrst.h> | |
| 124 #include <dcmtk/dcmdata/dcvrtm.h> | |
| 125 #include <dcmtk/dcmdata/dcvrui.h> | |
| 126 #include <dcmtk/dcmdata/dcvrul.h> | |
| 127 #include <dcmtk/dcmdata/dcvrus.h> | |
| 128 #include <dcmtk/dcmdata/dcvrut.h> | |
| 129 #include <dcmtk/dcmdata/dcpixel.h> | |
| 130 #include <dcmtk/dcmdata/dcpixseq.h> | |
| 131 #include <dcmtk/dcmdata/dcpxitem.h> | |
| 132 | |
| 133 | |
| 134 #include <boost/math/special_functions/round.hpp> | |
| 135 #include <dcmtk/dcmdata/dcostrmb.h> | |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
136 #include <boost/algorithm/string/predicate.hpp> |
| 790 | 137 |
| 138 | |
| 139 static const char* CONTENT_TYPE_OCTET_STREAM = "application/octet-stream"; | |
| 140 | |
| 141 | |
| 142 | |
| 143 namespace Orthanc | |
| 144 { | |
| 794 | 145 struct ParsedDicomFile::PImpl |
| 146 { | |
| 147 std::auto_ptr<DcmFileFormat> file_; | |
| 148 }; | |
| 149 | |
| 150 | |
| 151 // This method can only be called from the constructors! | |
|
1800
30e97a1f4093
callback for handling worklists with plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1788
diff
changeset
|
152 void ParsedDicomFile::Setup(const void* buffer, |
|
30e97a1f4093
callback for handling worklists with plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1788
diff
changeset
|
153 size_t size) |
| 790 | 154 { |
| 155 DcmInputBufferStream is; | |
| 156 if (size > 0) | |
| 157 { | |
| 158 is.setBuffer(buffer, size); | |
| 159 } | |
| 160 is.setEos(); | |
| 161 | |
| 794 | 162 pimpl_->file_.reset(new DcmFileFormat); |
| 163 pimpl_->file_->transferInit(); | |
| 164 if (!pimpl_->file_->read(is).good()) | |
| 790 | 165 { |
| 794 | 166 delete pimpl_; // Avoid a memory leak due to exception |
| 167 // throwing, as we are in the constructor | |
| 168 | |
| 790 | 169 throw OrthancException(ErrorCode_BadFileFormat); |
| 170 } | |
| 794 | 171 pimpl_->file_->loadAllDataIntoMemory(); |
| 172 pimpl_->file_->transferEnd(); | |
| 790 | 173 } |
| 174 | |
| 175 | |
| 176 static void SendPathValueForDictionary(RestApiOutput& output, | |
| 177 DcmItem& dicom) | |
| 178 { | |
| 179 Json::Value v = Json::arrayValue; | |
| 180 | |
| 181 for (unsigned long i = 0; i < dicom.card(); i++) | |
| 182 { | |
| 183 DcmElement* element = dicom.getElement(i); | |
| 184 if (element) | |
| 185 { | |
| 186 char buf[16]; | |
| 187 sprintf(buf, "%04x-%04x", element->getTag().getGTag(), element->getTag().getETag()); | |
| 188 v.append(buf); | |
| 189 } | |
| 190 } | |
| 191 | |
| 192 output.AnswerJson(v); | |
| 193 } | |
| 194 | |
| 195 static inline uint16_t GetCharValue(char c) | |
| 196 { | |
| 197 if (c >= '0' && c <= '9') | |
| 198 return c - '0'; | |
| 199 else if (c >= 'a' && c <= 'f') | |
| 200 return c - 'a' + 10; | |
| 201 else if (c >= 'A' && c <= 'F') | |
| 202 return c - 'A' + 10; | |
| 203 else | |
| 204 return 0; | |
| 205 } | |
| 206 | |
| 207 static inline uint16_t GetTagValue(const char* c) | |
| 208 { | |
| 209 return ((GetCharValue(c[0]) << 12) + | |
| 210 (GetCharValue(c[1]) << 8) + | |
| 211 (GetCharValue(c[2]) << 4) + | |
| 212 GetCharValue(c[3])); | |
| 213 } | |
| 214 | |
| 215 static void ParseTagAndGroup(DcmTagKey& key, | |
| 216 const std::string& tag) | |
| 217 { | |
| 218 DicomTag t = FromDcmtkBridge::ParseTag(tag); | |
| 219 key = DcmTagKey(t.GetGroup(), t.GetElement()); | |
| 220 } | |
| 221 | |
| 222 | |
| 223 static void SendSequence(RestApiOutput& output, | |
| 224 DcmSequenceOfItems& sequence) | |
| 225 { | |
| 226 // This element is a sequence | |
| 227 Json::Value v = Json::arrayValue; | |
| 228 | |
| 229 for (unsigned long i = 0; i < sequence.card(); i++) | |
| 230 { | |
| 231 v.append(boost::lexical_cast<std::string>(i)); | |
| 232 } | |
| 233 | |
| 234 output.AnswerJson(v); | |
| 235 } | |
| 236 | |
| 237 | |
| 238 static unsigned int GetPixelDataBlockCount(DcmPixelData& pixelData, | |
| 239 E_TransferSyntax transferSyntax) | |
| 240 { | |
| 241 DcmPixelSequence* pixelSequence = NULL; | |
| 242 if (pixelData.getEncapsulatedRepresentation | |
| 243 (transferSyntax, NULL, pixelSequence).good() && pixelSequence) | |
| 244 { | |
| 245 return pixelSequence->card(); | |
| 246 } | |
| 247 else | |
| 248 { | |
| 249 return 1; | |
| 250 } | |
| 251 } | |
| 252 | |
| 253 | |
|
1519
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
254 namespace |
| 790 | 255 { |
|
1519
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
256 class DicomFieldStream : public IHttpStreamAnswer |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
257 { |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
258 private: |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
259 DcmElement& element_; |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
260 uint32_t length_; |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
261 uint32_t offset_; |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
262 std::string chunk_; |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
263 size_t chunkSize_; |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
264 |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
265 public: |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
266 DicomFieldStream(DcmElement& element, |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
267 E_TransferSyntax transferSyntax) : |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
268 element_(element), |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
269 length_(element.getLength(transferSyntax)), |
| 1616 | 270 offset_(0), |
| 271 chunkSize_(0) | |
|
1519
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
272 { |
| 1521 | 273 static const size_t CHUNK_SIZE = 64 * 1024; // Use chunks of max 64KB |
|
1519
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
274 chunk_.resize(CHUNK_SIZE); |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
275 } |
| 790 | 276 |
|
1523
c388502a066d
testing FilesystemHttpSender
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1521
diff
changeset
|
277 virtual HttpCompression SetupHttpCompression(bool /*gzipAllowed*/, |
|
c388502a066d
testing FilesystemHttpSender
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1521
diff
changeset
|
278 bool /*deflateAllowed*/) |
|
1519
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
279 { |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
280 // No support for compression |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
281 return HttpCompression_None; |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
282 } |
| 790 | 283 |
|
1519
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
284 virtual bool HasContentFilename(std::string& filename) |
| 790 | 285 { |
|
1519
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
286 return false; |
| 790 | 287 } |
|
1519
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
288 |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
289 virtual std::string GetContentType() |
| 790 | 290 { |
|
1519
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
291 return ""; |
| 790 | 292 } |
| 293 | |
|
1519
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
294 virtual uint64_t GetContentLength() |
| 790 | 295 { |
|
1519
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
296 return length_; |
| 790 | 297 } |
|
1519
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
298 |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
299 virtual bool ReadNextChunk() |
| 790 | 300 { |
| 1520 | 301 assert(offset_ <= length_); |
|
1519
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
302 |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
303 if (offset_ == length_) |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
304 { |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
305 return false; |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
306 } |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
307 else |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
308 { |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
309 if (length_ - offset_ < chunk_.size()) |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
310 { |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
311 chunkSize_ = length_ - offset_; |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
312 } |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
313 else |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
314 { |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
315 chunkSize_ = chunk_.size(); |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
316 } |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
317 |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
318 OFCondition cond = element_.getPartialValue(&chunk_[0], offset_, chunkSize_); |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
319 |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
320 offset_ += chunkSize_; |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
321 |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
322 if (!cond.good()) |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
323 { |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
324 LOG(ERROR) << "Error while sending a DICOM field: " << cond.text(); |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
325 throw OrthancException(ErrorCode_InternalError); |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
326 } |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
327 |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
328 return true; |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
329 } |
| 790 | 330 } |
|
1519
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
331 |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
332 virtual const char *GetChunkContent() |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
333 { |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
334 return chunk_.c_str(); |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
335 } |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
336 |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
337 virtual size_t GetChunkSize() |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
338 { |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
339 return chunkSize_; |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
340 } |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
341 }; |
| 790 | 342 } |
| 343 | |
| 344 | |
| 345 static bool AnswerPixelData(RestApiOutput& output, | |
| 346 DcmItem& dicom, | |
| 347 E_TransferSyntax transferSyntax, | |
| 348 const std::string* blockUri) | |
| 349 { | |
| 350 DcmTag k(DICOM_TAG_PIXEL_DATA.GetGroup(), | |
| 351 DICOM_TAG_PIXEL_DATA.GetElement()); | |
| 352 | |
| 353 DcmElement *element = NULL; | |
| 354 if (!dicom.findAndGetElement(k, element).good() || | |
| 355 element == NULL) | |
| 356 { | |
| 357 return false; | |
| 358 } | |
| 359 | |
| 360 try | |
| 361 { | |
| 362 DcmPixelData& pixelData = dynamic_cast<DcmPixelData&>(*element); | |
| 363 if (blockUri == NULL) | |
| 364 { | |
| 365 // The user asks how many blocks are presents in this pixel data | |
| 366 unsigned int blocks = GetPixelDataBlockCount(pixelData, transferSyntax); | |
| 367 | |
| 368 Json::Value result(Json::arrayValue); | |
| 369 for (unsigned int i = 0; i < blocks; i++) | |
| 370 { | |
| 371 result.append(boost::lexical_cast<std::string>(i)); | |
| 372 } | |
| 373 | |
| 374 output.AnswerJson(result); | |
| 375 return true; | |
| 376 } | |
| 377 | |
| 378 | |
| 379 unsigned int block = boost::lexical_cast<unsigned int>(*blockUri); | |
| 380 | |
| 381 if (block < GetPixelDataBlockCount(pixelData, transferSyntax)) | |
| 382 { | |
| 383 DcmPixelSequence* pixelSequence = NULL; | |
| 384 if (pixelData.getEncapsulatedRepresentation | |
| 385 (transferSyntax, NULL, pixelSequence).good() && pixelSequence) | |
| 386 { | |
| 387 // This is the case for JPEG transfer syntaxes | |
| 388 if (block < pixelSequence->card()) | |
| 389 { | |
| 390 DcmPixelItem* pixelItem = NULL; | |
| 391 if (pixelSequence->getItem(pixelItem, block).good() && pixelItem) | |
| 392 { | |
| 393 if (pixelItem->getLength() == 0) | |
| 394 { | |
| 395 output.AnswerBuffer(NULL, 0, CONTENT_TYPE_OCTET_STREAM); | |
| 396 return true; | |
| 397 } | |
| 398 | |
| 399 Uint8* buffer = NULL; | |
| 400 if (pixelItem->getUint8Array(buffer).good() && buffer) | |
| 401 { | |
| 402 output.AnswerBuffer(buffer, pixelItem->getLength(), CONTENT_TYPE_OCTET_STREAM); | |
| 403 return true; | |
| 404 } | |
| 405 } | |
| 406 } | |
| 407 } | |
| 408 else | |
| 409 { | |
| 410 // This is the case for raw, uncompressed image buffers | |
| 411 assert(*blockUri == "0"); | |
|
1519
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
412 DicomFieldStream stream(*element, transferSyntax); |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
413 output.AnswerStream(stream); |
| 790 | 414 } |
| 415 } | |
| 416 } | |
| 417 catch (boost::bad_lexical_cast&) | |
| 418 { | |
| 419 // The URI entered by the user is not a number | |
| 420 } | |
| 421 catch (std::bad_cast&) | |
| 422 { | |
| 423 // This should never happen | |
| 424 } | |
| 425 | |
| 426 return false; | |
| 427 } | |
| 428 | |
| 429 | |
| 430 | |
| 431 static void SendPathValueForLeaf(RestApiOutput& output, | |
| 432 const std::string& tag, | |
| 433 DcmItem& dicom, | |
| 434 E_TransferSyntax transferSyntax) | |
| 435 { | |
| 436 DcmTagKey k; | |
| 437 ParseTagAndGroup(k, tag); | |
| 438 | |
| 439 DcmSequenceOfItems* sequence = NULL; | |
| 440 if (dicom.findAndGetSequence(k, sequence).good() && | |
| 441 sequence != NULL && | |
| 442 sequence->getVR() == EVR_SQ) | |
| 443 { | |
| 444 SendSequence(output, *sequence); | |
| 445 return; | |
| 446 } | |
| 447 | |
| 448 DcmElement* element = NULL; | |
| 449 if (dicom.findAndGetElement(k, element).good() && | |
| 450 element != NULL && | |
| 451 //element->getVR() != EVR_UNKNOWN && // This would forbid private tags | |
| 452 element->getVR() != EVR_SQ) | |
| 453 { | |
|
1519
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
454 DicomFieldStream stream(*element, transferSyntax); |
|
8bd0d897763f
refactoring: IHttpStreamAnswer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1486
diff
changeset
|
455 output.AnswerStream(stream); |
| 790 | 456 } |
| 457 } | |
| 458 | |
| 459 void ParsedDicomFile::SendPathValue(RestApiOutput& output, | |
| 460 const UriComponents& uri) | |
| 461 { | |
| 794 | 462 DcmItem* dicom = pimpl_->file_->getDataset(); |
| 463 E_TransferSyntax transferSyntax = pimpl_->file_->getDataset()->getOriginalXfer(); | |
| 790 | 464 |
| 465 // Special case: Accessing the pixel data | |
| 466 if (uri.size() == 1 || | |
| 467 uri.size() == 2) | |
| 468 { | |
| 469 DcmTagKey tag; | |
| 470 ParseTagAndGroup(tag, uri[0]); | |
| 471 | |
| 472 if (tag.getGroup() == DICOM_TAG_PIXEL_DATA.GetGroup() && | |
| 473 tag.getElement() == DICOM_TAG_PIXEL_DATA.GetElement()) | |
| 474 { | |
| 475 AnswerPixelData(output, *dicom, transferSyntax, uri.size() == 1 ? NULL : &uri[1]); | |
| 476 return; | |
| 477 } | |
| 478 } | |
| 479 | |
| 480 // Go down in the tag hierarchy according to the URI | |
| 481 for (size_t pos = 0; pos < uri.size() / 2; pos++) | |
| 482 { | |
| 483 size_t index; | |
| 484 try | |
| 485 { | |
| 486 index = boost::lexical_cast<size_t>(uri[2 * pos + 1]); | |
| 487 } | |
| 488 catch (boost::bad_lexical_cast&) | |
| 489 { | |
| 490 return; | |
| 491 } | |
| 492 | |
| 493 DcmTagKey k; | |
| 494 DcmItem *child = NULL; | |
| 495 ParseTagAndGroup(k, uri[2 * pos]); | |
| 496 if (!dicom->findAndGetSequenceItem(k, child, index).good() || | |
| 497 child == NULL) | |
| 498 { | |
| 499 return; | |
| 500 } | |
| 501 | |
| 502 dicom = child; | |
| 503 } | |
| 504 | |
| 505 // We have reached the end of the URI | |
| 506 if (uri.size() % 2 == 0) | |
| 507 { | |
| 508 SendPathValueForDictionary(output, *dicom); | |
| 509 } | |
| 510 else | |
| 511 { | |
| 512 SendPathValueForLeaf(output, uri.back(), *dicom, transferSyntax); | |
| 513 } | |
| 514 } | |
| 515 | |
| 516 | |
| 517 void ParsedDicomFile::Remove(const DicomTag& tag) | |
| 518 { | |
| 519 DcmTagKey key(tag.GetGroup(), tag.GetElement()); | |
| 794 | 520 DcmElement* element = pimpl_->file_->getDataset()->remove(key); |
| 790 | 521 if (element != NULL) |
| 522 { | |
| 523 delete element; | |
| 524 } | |
| 525 } | |
| 526 | |
| 527 | |
| 528 | |
|
991
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
529 void ParsedDicomFile::RemovePrivateTagsInternal(const std::set<DicomTag>* toKeep) |
| 790 | 530 { |
|
991
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
531 DcmDataset& dataset = *pimpl_->file_->getDataset(); |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
532 |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
533 // Loop over the dataset to detect its private tags |
| 790 | 534 typedef std::list<DcmElement*> Tags; |
| 535 Tags privateTags; | |
| 536 | |
| 537 for (unsigned long i = 0; i < dataset.card(); i++) | |
| 538 { | |
| 539 DcmElement* element = dataset.getElement(i); | |
| 540 DcmTag tag(element->getTag()); | |
|
991
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
541 |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
542 // Is this a private tag? |
| 1694 | 543 if (tag.isPrivate()) |
| 790 | 544 { |
|
991
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
545 bool remove = true; |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
546 |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
547 // Check whether this private tag is to be kept |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
548 if (toKeep != NULL) |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
549 { |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
550 DicomTag tmp = FromDcmtkBridge::Convert(tag); |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
551 if (toKeep->find(tmp) != toKeep->end()) |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
552 { |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
553 remove = false; // Keep it |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
554 } |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
555 } |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
556 |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
557 if (remove) |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
558 { |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
559 privateTags.push_back(element); |
|
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
560 } |
| 790 | 561 } |
| 562 } | |
| 563 | |
|
991
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
956
diff
changeset
|
564 // Loop over the detected private tags to remove them |
| 790 | 565 for (Tags::iterator it = privateTags.begin(); |
| 566 it != privateTags.end(); ++it) | |
| 567 { | |
| 568 DcmElement* tmp = dataset.remove(*it); | |
| 569 if (tmp != NULL) | |
| 570 { | |
| 571 delete tmp; | |
| 572 } | |
| 573 } | |
| 574 } | |
| 575 | |
| 576 | |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
577 static void InsertInternal(DcmDataset& dicom, |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
578 DcmElement* element) |
| 790 | 579 { |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
580 OFCondition cond = dicom.insert(element, false, false); |
|
1307
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
581 if (!cond.good()) |
| 790 | 582 { |
| 583 // This field already exists | |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
584 delete element; |
| 790 | 585 throw OrthancException(ErrorCode_InternalError); |
| 586 } | |
| 587 } | |
| 588 | |
| 589 | |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
590 void ParsedDicomFile::Insert(const DicomTag& tag, |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
591 const Json::Value& value, |
|
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
592 bool decodeDataUriScheme) |
| 790 | 593 { |
|
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
594 std::auto_ptr<DcmElement> element(FromDcmtkBridge::FromJson(tag, value, decodeDataUriScheme, GetEncoding())); |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
595 InsertInternal(*pimpl_->file_->getDataset(), element.release()); |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
596 } |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
597 |
| 790 | 598 |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
599 static void ReplaceInternal(DcmDataset& dicom, |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
600 std::auto_ptr<DcmElement>& element, |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
601 DicomReplaceMode mode) |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
602 { |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
603 const DcmTagKey& tag = element->getTag(); |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
604 |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
605 if (!dicom.findAndDeleteElement(tag).good()) |
| 790 | 606 { |
| 607 // This field does not exist, act wrt. the specified "mode" | |
| 608 switch (mode) | |
| 609 { | |
| 610 case DicomReplaceMode_InsertIfAbsent: | |
| 611 break; | |
| 612 | |
| 613 case DicomReplaceMode_ThrowIfAbsent: | |
| 614 throw OrthancException(ErrorCode_InexistentItem); | |
| 615 | |
| 616 case DicomReplaceMode_IgnoreIfAbsent: | |
| 617 return; | |
| 618 } | |
| 619 } | |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
620 |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
621 // Either the tag was not existing, or the replace mode was set to |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
622 // "InsertIfAbsent" |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
623 InsertInternal(dicom, element.release()); |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
624 } |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
625 |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
626 |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
627 void ParsedDicomFile::UpdateStorageUid(const DicomTag& tag, |
| 1695 | 628 const std::string& utf8Value, |
|
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
629 bool decodeDataUriScheme) |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
630 { |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
631 if (tag != DICOM_TAG_SOP_CLASS_UID && |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
632 tag != DICOM_TAG_SOP_INSTANCE_UID) |
| 790 | 633 { |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
634 return; |
| 790 | 635 } |
| 636 | |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
637 std::string binary; |
| 1695 | 638 const std::string* decoded = &utf8Value; |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
639 |
|
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
640 if (decodeDataUriScheme && |
| 1695 | 641 boost::starts_with(utf8Value, "data:application/octet-stream;base64,")) |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
642 { |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
643 std::string mime; |
| 1695 | 644 Toolbox::DecodeDataUriScheme(mime, binary, utf8Value); |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
645 decoded = &binary; |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
646 } |
| 1695 | 647 else |
| 648 { | |
| 649 Encoding encoding = GetEncoding(); | |
| 650 if (GetEncoding() != Encoding_Utf8) | |
| 651 { | |
| 652 binary = Toolbox::ConvertFromUtf8(utf8Value, encoding); | |
| 653 decoded = &binary; | |
| 654 } | |
| 655 } | |
| 790 | 656 |
| 657 /** | |
| 658 * dcmodify will automatically correct 'Media Storage SOP Class | |
| 659 * UID' and 'Media Storage SOP Instance UID' in the metaheader, if | |
| 660 * you make changes to the related tags in the dataset ('SOP Class | |
| 661 * UID' and 'SOP Instance UID') via insert or modify mode | |
| 662 * options. You can disable this behaviour by using the -nmu | |
| 663 * option. | |
| 664 **/ | |
| 665 | |
| 666 if (tag == DICOM_TAG_SOP_CLASS_UID) | |
| 667 { | |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
668 Replace(DICOM_TAG_MEDIA_STORAGE_SOP_CLASS_UID, *decoded, DicomReplaceMode_InsertIfAbsent); |
| 790 | 669 } |
| 670 | |
| 671 if (tag == DICOM_TAG_SOP_INSTANCE_UID) | |
| 672 { | |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
673 Replace(DICOM_TAG_MEDIA_STORAGE_SOP_INSTANCE_UID, *decoded, DicomReplaceMode_InsertIfAbsent); |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
674 } |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
675 } |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
676 |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
677 |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
678 void ParsedDicomFile::Replace(const DicomTag& tag, |
| 1695 | 679 const std::string& utf8Value, |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
680 DicomReplaceMode mode) |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
681 { |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
682 std::auto_ptr<DcmElement> element(FromDcmtkBridge::CreateElementForTag(tag)); |
| 1695 | 683 FromDcmtkBridge::FillElementWithString(*element, tag, utf8Value, false, GetEncoding()); |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
684 ReplaceInternal(*pimpl_->file_->getDataset(), element, mode); |
| 1695 | 685 UpdateStorageUid(tag, utf8Value, false); |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
686 } |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
687 |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
688 |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
689 void ParsedDicomFile::Replace(const DicomTag& tag, |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
690 const Json::Value& value, |
|
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
691 bool decodeDataUriScheme, |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
692 DicomReplaceMode mode) |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
693 { |
|
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
694 std::auto_ptr<DcmElement> element(FromDcmtkBridge::FromJson(tag, value, decodeDataUriScheme, GetEncoding())); |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
695 ReplaceInternal(*pimpl_->file_->getDataset(), element, mode); |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
696 |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
697 if (tag == DICOM_TAG_SOP_CLASS_UID || |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
698 tag == DICOM_TAG_SOP_INSTANCE_UID) |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
699 { |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
700 if (value.type() != Json::stringValue) |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
701 { |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
702 throw OrthancException(ErrorCode_BadParameterType); |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
703 } |
|
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
704 |
|
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
705 UpdateStorageUid(tag, value.asString(), decodeDataUriScheme); |
| 790 | 706 } |
| 707 } | |
| 708 | |
| 709 | |
| 710 void ParsedDicomFile::Answer(RestApiOutput& output) | |
| 711 { | |
| 712 std::string serialized; | |
|
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
991
diff
changeset
|
713 if (FromDcmtkBridge::SaveToMemoryBuffer(serialized, *pimpl_->file_->getDataset())) |
| 790 | 714 { |
| 715 output.AnswerBuffer(serialized, CONTENT_TYPE_OCTET_STREAM); | |
| 716 } | |
| 717 } | |
| 718 | |
| 719 | |
| 720 | |
| 721 bool ParsedDicomFile::GetTagValue(std::string& value, | |
| 722 const DicomTag& tag) | |
| 723 { | |
| 724 DcmTagKey k(tag.GetGroup(), tag.GetElement()); | |
| 794 | 725 DcmDataset& dataset = *pimpl_->file_->getDataset(); |
|
1307
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
726 |
|
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
727 if (tag.IsPrivate() || |
|
1655
e40fd0d925c5
/tools/create-dicom can create tags with unknown VR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1641
diff
changeset
|
728 FromDcmtkBridge::IsUnknownTag(tag) || |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
729 tag == DICOM_TAG_PIXEL_DATA || |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
730 tag == DICOM_TAG_ENCAPSULATED_DOCUMENT) |
| 790 | 731 { |
|
1307
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
732 const Uint8* data = NULL; // This is freed in the destructor of the dataset |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
733 long unsigned int count = 0; |
| 790 | 734 |
|
1307
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
735 if (dataset.findAndGetUint8Array(k, data, &count).good()) |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
736 { |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
737 if (count > 0) |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
738 { |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
739 assert(data != NULL); |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
740 value.assign(reinterpret_cast<const char*>(data), count); |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
741 } |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
742 else |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
743 { |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
744 value.clear(); |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
745 } |
| 790 | 746 |
|
1307
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
747 return true; |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
748 } |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
749 else |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
750 { |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
751 return false; |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
752 } |
| 790 | 753 } |
| 754 else | |
| 755 { | |
|
1307
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
756 DcmElement* element = NULL; |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
757 if (!dataset.findAndGetElement(k, element).good() || |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
758 element == NULL) |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
759 { |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
760 return false; |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
761 } |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
762 |
|
1736
b953c6eef28d
ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1735
diff
changeset
|
763 std::auto_ptr<DicomValue> v(FromDcmtkBridge::ConvertLeafElement |
|
b953c6eef28d
ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1735
diff
changeset
|
764 (*element, DicomToJsonFlags_Default, GetEncoding())); |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
765 |
|
1737
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
766 if (v.get() == NULL || |
|
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
767 v->IsNull()) |
|
1307
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
768 { |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
769 value = ""; |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
770 } |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
771 else |
|
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
772 { |
|
1737
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
773 // TODO v->IsBinary() |
|
ec66a16aa398
removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
774 value = v->GetContent(); |
|
1307
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
775 } |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
776 |
|
1307
f796207e3df1
Fix replacement and insertion of private DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1288
diff
changeset
|
777 return true; |
| 790 | 778 } |
| 779 } | |
| 780 | |
| 781 | |
| 782 DicomInstanceHasher ParsedDicomFile::GetHasher() | |
| 783 { | |
| 784 std::string patientId, studyUid, seriesUid, instanceUid; | |
| 785 | |
| 786 if (!GetTagValue(patientId, DICOM_TAG_PATIENT_ID) || | |
| 787 !GetTagValue(studyUid, DICOM_TAG_STUDY_INSTANCE_UID) || | |
| 788 !GetTagValue(seriesUid, DICOM_TAG_SERIES_INSTANCE_UID) || | |
| 789 !GetTagValue(instanceUid, DICOM_TAG_SOP_INSTANCE_UID)) | |
| 790 { | |
| 791 throw OrthancException(ErrorCode_BadFileFormat); | |
| 792 } | |
| 793 | |
| 794 return DicomInstanceHasher(patientId, studyUid, seriesUid, instanceUid); | |
| 795 } | |
| 796 | |
| 797 | |
| 798 void ParsedDicomFile::SaveToMemoryBuffer(std::string& buffer) | |
| 799 { | |
|
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
991
diff
changeset
|
800 FromDcmtkBridge::SaveToMemoryBuffer(buffer, *pimpl_->file_->getDataset()); |
| 790 | 801 } |
| 802 | |
| 803 | |
| 804 void ParsedDicomFile::SaveToFile(const std::string& path) | |
| 805 { | |
| 806 // TODO Avoid using a temporary memory buffer, write directly on disk | |
| 807 std::string content; | |
| 808 SaveToMemoryBuffer(content); | |
| 809 Toolbox::WriteFile(content, path); | |
| 810 } | |
| 811 | |
| 812 | |
|
1805
f08978b1f45b
c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1800
diff
changeset
|
813 ParsedDicomFile::ParsedDicomFile(bool createIdentifiers) : pimpl_(new PImpl) |
| 790 | 814 { |
| 794 | 815 pimpl_->file_.reset(new DcmFileFormat); |
|
1805
f08978b1f45b
c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1800
diff
changeset
|
816 |
|
f08978b1f45b
c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1800
diff
changeset
|
817 if (createIdentifiers) |
|
f08978b1f45b
c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1800
diff
changeset
|
818 { |
|
f08978b1f45b
c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1800
diff
changeset
|
819 Replace(DICOM_TAG_PATIENT_ID, FromDcmtkBridge::GenerateUniqueIdentifier(ResourceType_Patient)); |
|
f08978b1f45b
c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1800
diff
changeset
|
820 Replace(DICOM_TAG_STUDY_INSTANCE_UID, FromDcmtkBridge::GenerateUniqueIdentifier(ResourceType_Study)); |
|
f08978b1f45b
c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1800
diff
changeset
|
821 Replace(DICOM_TAG_SERIES_INSTANCE_UID, FromDcmtkBridge::GenerateUniqueIdentifier(ResourceType_Series)); |
|
f08978b1f45b
c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1800
diff
changeset
|
822 Replace(DICOM_TAG_SOP_INSTANCE_UID, FromDcmtkBridge::GenerateUniqueIdentifier(ResourceType_Instance)); |
|
f08978b1f45b
c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1800
diff
changeset
|
823 } |
| 790 | 824 } |
| 825 | |
| 791 | 826 |
|
1787
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1786
diff
changeset
|
827 ParsedDicomFile::ParsedDicomFile(const DicomMap& map) : pimpl_(new PImpl) |
|
1786
164d78911382
primitives to handle dicom worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
828 { |
|
1787
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1786
diff
changeset
|
829 std::auto_ptr<DcmDataset> dataset(ToDcmtkBridge::Convert(map)); |
|
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1786
diff
changeset
|
830 |
|
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1786
diff
changeset
|
831 // NOTE: This implies an unnecessary memory copy of the dataset, but no way to get around |
|
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1786
diff
changeset
|
832 // http://support.dcmtk.org/redmine/issues/544 |
|
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1786
diff
changeset
|
833 std::auto_ptr<DcmFileFormat> fileFormat(new DcmFileFormat(dataset.get())); |
|
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1786
diff
changeset
|
834 |
|
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1786
diff
changeset
|
835 pimpl_->file_.reset(fileFormat.release()); |
|
1786
164d78911382
primitives to handle dicom worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
836 } |
|
164d78911382
primitives to handle dicom worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
837 |
|
164d78911382
primitives to handle dicom worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
838 |
|
1800
30e97a1f4093
callback for handling worklists with plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1788
diff
changeset
|
839 ParsedDicomFile::ParsedDicomFile(const void* content, |
|
30e97a1f4093
callback for handling worklists with plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1788
diff
changeset
|
840 size_t size) : pimpl_(new PImpl) |
| 791 | 841 { |
| 842 Setup(content, size); | |
| 843 } | |
| 844 | |
| 794 | 845 ParsedDicomFile::ParsedDicomFile(const std::string& content) : pimpl_(new PImpl) |
| 791 | 846 { |
| 847 if (content.size() == 0) | |
| 848 { | |
| 849 Setup(NULL, 0); | |
| 850 } | |
| 851 else | |
| 852 { | |
| 853 Setup(&content[0], content.size()); | |
| 854 } | |
| 855 } | |
| 792 | 856 |
| 857 | |
| 794 | 858 ParsedDicomFile::ParsedDicomFile(ParsedDicomFile& other) : |
| 859 pimpl_(new PImpl) | |
| 792 | 860 { |
| 794 | 861 pimpl_->file_.reset(dynamic_cast<DcmFileFormat*>(other.pimpl_->file_->clone())); |
|
956
2fd5a163776d
primitives for proper encoding handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
862 |
|
1564
1b7def486e62
creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1562
diff
changeset
|
863 // Create a new instance-level identifier |
|
1b7def486e62
creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1562
diff
changeset
|
864 Replace(DICOM_TAG_SOP_INSTANCE_UID, FromDcmtkBridge::GenerateUniqueIdentifier(ResourceType_Instance)); |
| 792 | 865 } |
| 866 | |
| 867 | |
|
1788
6a2d507ef064
getting rid of opaque data structures
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1787
diff
changeset
|
868 ParsedDicomFile::ParsedDicomFile(DcmDataset& dicom) : pimpl_(new PImpl) |
|
6a2d507ef064
getting rid of opaque data structures
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1787
diff
changeset
|
869 { |
|
6a2d507ef064
getting rid of opaque data structures
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1787
diff
changeset
|
870 pimpl_->file_.reset(new DcmFileFormat(&dicom)); |
|
6a2d507ef064
getting rid of opaque data structures
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1787
diff
changeset
|
871 } |
|
6a2d507ef064
getting rid of opaque data structures
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1787
diff
changeset
|
872 |
|
6a2d507ef064
getting rid of opaque data structures
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1787
diff
changeset
|
873 |
|
6a2d507ef064
getting rid of opaque data structures
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1787
diff
changeset
|
874 ParsedDicomFile::ParsedDicomFile(DcmFileFormat& dicom) : pimpl_(new PImpl) |
|
6a2d507ef064
getting rid of opaque data structures
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1787
diff
changeset
|
875 { |
|
6a2d507ef064
getting rid of opaque data structures
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1787
diff
changeset
|
876 pimpl_->file_.reset(new DcmFileFormat(dicom)); |
|
6a2d507ef064
getting rid of opaque data structures
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1787
diff
changeset
|
877 } |
|
6a2d507ef064
getting rid of opaque data structures
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1787
diff
changeset
|
878 |
|
6a2d507ef064
getting rid of opaque data structures
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1787
diff
changeset
|
879 |
| 792 | 880 ParsedDicomFile::~ParsedDicomFile() |
| 881 { | |
| 794 | 882 delete pimpl_; |
| 792 | 883 } |
| 884 | |
| 793 | 885 |
|
1824
b530c3dfe2a6
refactoring image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1818
diff
changeset
|
886 DcmFileFormat& ParsedDicomFile::GetDcmtkObject() const |
| 793 | 887 { |
|
1788
6a2d507ef064
getting rid of opaque data structures
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1787
diff
changeset
|
888 return *pimpl_->file_.get(); |
| 793 | 889 } |
| 890 | |
| 891 | |
| 892 ParsedDicomFile* ParsedDicomFile::Clone() | |
| 893 { | |
| 794 | 894 return new ParsedDicomFile(*this); |
| 793 | 895 } |
|
800
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
896 |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
897 |
| 1562 | 898 void ParsedDicomFile::EmbedContent(const std::string& dataUriScheme) |
|
800
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
899 { |
|
1641
4e56b5a206b7
Support of binary tags encoded using data URI scheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1616
diff
changeset
|
900 std::string mime, content; |
|
4e56b5a206b7
Support of binary tags encoded using data URI scheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1616
diff
changeset
|
901 Toolbox::DecodeDataUriScheme(mime, content, dataUriScheme); |
| 1562 | 902 Toolbox::ToLowerCase(mime); |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
903 |
|
1781
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
904 if (mime == "image/png" || |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
905 mime == "image/jpeg") |
| 1562 | 906 { |
| 907 EmbedImage(mime, content); | |
| 908 } | |
| 909 else if (mime == "application/pdf") | |
| 910 { | |
| 911 EmbedPdf(content); | |
| 912 } | |
| 913 else | |
| 914 { | |
|
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1689
diff
changeset
|
915 LOG(ERROR) << "Unsupported MIME type for the content of a new DICOM file: " << mime; |
| 1562 | 916 throw OrthancException(ErrorCode_NotImplemented); |
| 917 } | |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
918 } |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
919 |
|
800
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
920 |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
921 void ParsedDicomFile::EmbedImage(const std::string& mime, |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
922 const std::string& content) |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
923 { |
|
800
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
924 if (mime == "image/png") |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
925 { |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
926 PngReader reader; |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
927 reader.ReadFromMemory(content); |
|
800
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
928 EmbedImage(reader); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
929 } |
|
1781
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
930 else if (mime == "image/jpeg") |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
931 { |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
932 JpegReader reader; |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
933 reader.ReadFromMemory(content); |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
934 EmbedImage(reader); |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
935 } |
|
800
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
936 else |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
937 { |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
938 throw OrthancException(ErrorCode_NotImplemented); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
939 } |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
940 } |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
941 |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
942 |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
943 void ParsedDicomFile::EmbedImage(const ImageAccessor& accessor) |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
944 { |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
945 if (accessor.GetFormat() != PixelFormat_Grayscale8 && |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
946 accessor.GetFormat() != PixelFormat_Grayscale16 && |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
947 accessor.GetFormat() != PixelFormat_RGB24 && |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
948 accessor.GetFormat() != PixelFormat_RGBA32) |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
949 { |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
950 throw OrthancException(ErrorCode_NotImplemented); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
951 } |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
952 |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
953 if (accessor.GetFormat() == PixelFormat_RGBA32) |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
954 { |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
955 LOG(WARNING) << "Getting rid of the alpha channel when embedding a RGBA image inside DICOM"; |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
956 } |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
957 |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
958 // http://dicomiseasy.blogspot.be/2012/08/chapter-12-pixel-data.html |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
959 |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
960 Remove(DICOM_TAG_PIXEL_DATA); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
961 Replace(DICOM_TAG_COLUMNS, boost::lexical_cast<std::string>(accessor.GetWidth())); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
962 Replace(DICOM_TAG_ROWS, boost::lexical_cast<std::string>(accessor.GetHeight())); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
963 Replace(DICOM_TAG_SAMPLES_PER_PIXEL, "1"); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
964 Replace(DICOM_TAG_NUMBER_OF_FRAMES, "1"); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
965 Replace(DICOM_TAG_PIXEL_REPRESENTATION, "0"); // Unsigned pixels |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
966 Replace(DICOM_TAG_PLANAR_CONFIGURATION, "0"); // Color channels are interleaved |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
967 Replace(DICOM_TAG_PHOTOMETRIC_INTERPRETATION, "MONOCHROME2"); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
968 Replace(DICOM_TAG_BITS_ALLOCATED, "8"); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
969 Replace(DICOM_TAG_BITS_STORED, "8"); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
970 Replace(DICOM_TAG_HIGH_BIT, "7"); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
971 |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
972 unsigned int bytesPerPixel = 1; |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
973 |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
974 switch (accessor.GetFormat()) |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
975 { |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
976 case PixelFormat_RGB24: |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
977 case PixelFormat_RGBA32: |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
978 Replace(DICOM_TAG_PHOTOMETRIC_INTERPRETATION, "RGB"); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
979 Replace(DICOM_TAG_SAMPLES_PER_PIXEL, "3"); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
980 bytesPerPixel = 3; |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
981 break; |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
982 |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
983 case PixelFormat_Grayscale8: |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
984 break; |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
985 |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
986 case PixelFormat_Grayscale16: |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
987 Replace(DICOM_TAG_BITS_ALLOCATED, "16"); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
988 Replace(DICOM_TAG_BITS_STORED, "16"); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
989 Replace(DICOM_TAG_HIGH_BIT, "15"); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
990 bytesPerPixel = 2; |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
991 break; |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
992 |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
993 default: |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
994 throw OrthancException(ErrorCode_NotImplemented); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
995 } |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
996 |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
997 DcmTag key(DICOM_TAG_PIXEL_DATA.GetGroup(), |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
998 DICOM_TAG_PIXEL_DATA.GetElement()); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
999 |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1000 std::auto_ptr<DcmPixelData> pixels(new DcmPixelData(key)); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1001 |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1002 unsigned int pitch = accessor.GetWidth() * bytesPerPixel; |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1003 Uint8* target = NULL; |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1004 pixels->createUint8Array(accessor.GetHeight() * pitch, target); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1005 |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1006 for (unsigned int y = 0; y < accessor.GetHeight(); y++) |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1007 { |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1008 switch (accessor.GetFormat()) |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1009 { |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1010 case PixelFormat_RGB24: |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1011 case PixelFormat_Grayscale8: |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1012 case PixelFormat_Grayscale16: |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1013 case PixelFormat_SignedGrayscale16: |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1014 { |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1015 memcpy(target, reinterpret_cast<const Uint8*>(accessor.GetConstRow(y)), pitch); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1016 target += pitch; |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1017 break; |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1018 } |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1019 |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1020 case PixelFormat_RGBA32: |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1021 { |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1022 // The alpha channel is not supported by the DICOM standard |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1023 const Uint8* source = reinterpret_cast<const Uint8*>(accessor.GetConstRow(y)); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1024 for (unsigned int x = 0; x < accessor.GetWidth(); x++, target += 3, source += 4) |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1025 { |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1026 target[0] = source[0]; |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1027 target[1] = source[1]; |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1028 target[2] = source[2]; |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1029 } |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1030 |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1031 break; |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1032 } |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1033 |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1034 default: |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1035 throw OrthancException(ErrorCode_NotImplemented); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1036 } |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1037 } |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1038 |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1039 if (!pimpl_->file_->getDataset()->insert(pixels.release(), false, false).good()) |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1040 { |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1041 throw OrthancException(ErrorCode_InternalError); |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1042 } |
|
ecedd89055db
generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
799
diff
changeset
|
1043 } |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
853
diff
changeset
|
1044 |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
853
diff
changeset
|
1045 |
|
956
2fd5a163776d
primitives for proper encoding handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
1046 Encoding ParsedDicomFile::GetEncoding() const |
|
2fd5a163776d
primitives for proper encoding handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
1047 { |
| 1695 | 1048 return FromDcmtkBridge::DetectEncoding(*pimpl_->file_->getDataset()); |
|
956
2fd5a163776d
primitives for proper encoding handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
1049 } |
|
1090
e494ceb8d763
support more encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1018
diff
changeset
|
1050 |
|
e494ceb8d763
support more encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1018
diff
changeset
|
1051 |
|
e494ceb8d763
support more encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1018
diff
changeset
|
1052 void ParsedDicomFile::SetEncoding(Encoding encoding) |
|
e494ceb8d763
support more encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1018
diff
changeset
|
1053 { |
|
1558
124de28b32ed
fix encodings of newly created dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
1054 if (encoding == Encoding_Windows1251) |
|
1090
e494ceb8d763
support more encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1018
diff
changeset
|
1055 { |
|
1558
124de28b32ed
fix encodings of newly created dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
1056 // This Cyrillic codepage is not officially supported by the |
|
124de28b32ed
fix encodings of newly created dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
1057 // DICOM standard. Do not set the SpecificCharacterSet tag. |
|
124de28b32ed
fix encodings of newly created dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
1058 return; |
|
1090
e494ceb8d763
support more encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1018
diff
changeset
|
1059 } |
|
e494ceb8d763
support more encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1018
diff
changeset
|
1060 |
|
1565
4b23310eb7e8
add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1564
diff
changeset
|
1061 std::string s = GetDicomSpecificCharacterSet(encoding); |
| 1091 | 1062 Replace(DICOM_TAG_SPECIFIC_CHARACTER_SET, s, DicomReplaceMode_InsertIfAbsent); |
|
1090
e494ceb8d763
support more encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1018
diff
changeset
|
1063 } |
|
e494ceb8d763
support more encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1018
diff
changeset
|
1064 |
| 1686 | 1065 void ParsedDicomFile::ToJson(Json::Value& target, |
| 1066 DicomToJsonFormat format, | |
|
1735
a001f6226c7c
primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
1067 DicomToJsonFlags flags, |
| 1686 | 1068 unsigned int maxStringLength) |
|
1160
80671157d051
generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1113
diff
changeset
|
1069 { |
|
1735
a001f6226c7c
primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
1070 FromDcmtkBridge::ToJson(target, *pimpl_->file_->getDataset(), format, flags, maxStringLength); |
|
1160
80671157d051
generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1113
diff
changeset
|
1071 } |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1072 |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1073 |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1827
diff
changeset
|
1074 void ParsedDicomFile::HeaderToJson(Json::Value& target, |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1827
diff
changeset
|
1075 DicomToJsonFormat format) |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1827
diff
changeset
|
1076 { |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1827
diff
changeset
|
1077 FromDcmtkBridge::ToJson(target, *pimpl_->file_->getMetaInfo(), format, DicomToJsonFlags_None, 0); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1827
diff
changeset
|
1078 } |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1827
diff
changeset
|
1079 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1827
diff
changeset
|
1080 |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1081 bool ParsedDicomFile::HasTag(const DicomTag& tag) const |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1082 { |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1083 DcmTag key(tag.GetGroup(), tag.GetElement()); |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1084 return pimpl_->file_->getDataset()->tagExists(key); |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1085 } |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1086 |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1087 |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1088 void ParsedDicomFile::EmbedPdf(const std::string& pdf) |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1089 { |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1090 if (pdf.size() < 5 || // (*) |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1091 strncmp("%PDF-", pdf.c_str(), 5) != 0) |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1092 { |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1093 LOG(ERROR) << "Not a PDF file"; |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1094 throw OrthancException(ErrorCode_BadFileFormat); |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1095 } |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1096 |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1097 Replace(DICOM_TAG_SOP_CLASS_UID, UID_EncapsulatedPDFStorage); |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1098 Replace(FromDcmtkBridge::Convert(DCM_Modality), "OT"); |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1099 Replace(FromDcmtkBridge::Convert(DCM_ConversionType), "WSD"); |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1100 Replace(FromDcmtkBridge::Convert(DCM_MIMETypeOfEncapsulatedDocument), "application/pdf"); |
| 1566 | 1101 //Replace(FromDcmtkBridge::Convert(DCM_SeriesNumber), "1"); |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1102 |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1103 std::auto_ptr<DcmPolymorphOBOW> element(new DcmPolymorphOBOW(DCM_EncapsulatedDocument)); |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1104 |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1105 size_t s = pdf.size(); |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1106 if (s & 1) |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1107 { |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1108 // The size of the buffer must be even |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1109 s += 1; |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1110 } |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1111 |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1112 Uint8* bytes = NULL; |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1113 OFCondition result = element->createUint8Array(s, bytes); |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1114 if (!result.good() || bytes == NULL) |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1115 { |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1116 throw OrthancException(ErrorCode_NotEnoughMemory); |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1117 } |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1118 |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1119 // Blank pad byte (no access violation, as "pdf.size() >= 5" because of (*) ) |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1120 bytes[s - 1] = 0; |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1121 |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1122 memcpy(bytes, pdf.c_str(), pdf.size()); |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1123 |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1124 DcmPolymorphOBOW* obj = element.release(); |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1125 result = pimpl_->file_->getDataset()->insert(obj); |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1126 |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1127 if (!result.good()) |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1128 { |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1129 delete obj; |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1130 throw OrthancException(ErrorCode_NotEnoughMemory); |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1131 } |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1132 } |
|
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1523
diff
changeset
|
1133 |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1134 |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1135 bool ParsedDicomFile::ExtractPdf(std::string& pdf) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1136 { |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1137 std::string sop, mime; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1138 |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1139 if (!GetTagValue(sop, DICOM_TAG_SOP_CLASS_UID) || |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1140 !GetTagValue(mime, FromDcmtkBridge::Convert(DCM_MIMETypeOfEncapsulatedDocument)) || |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1141 sop != UID_EncapsulatedPDFStorage || |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1142 mime != "application/pdf") |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1143 { |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1144 return false; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1145 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1146 |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1147 if (!GetTagValue(pdf, DICOM_TAG_ENCAPSULATED_DOCUMENT)) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1148 { |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1149 return false; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1150 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1151 |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1152 // Strip the possible pad byte at the end of file, because the |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1153 // encapsulated documents must always have an even length. The PDF |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1154 // format expects files to end with %%EOF followed by CR/LF. If |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1155 // the last character of the file is not a CR or LF, we assume it |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1156 // is a pad byte and remove it. |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1157 if (pdf.size() > 0) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1158 { |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1159 char last = *pdf.rbegin(); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1160 |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1161 if (last != 10 && last != 13) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1162 { |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1163 pdf.resize(pdf.size() - 1); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1164 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1165 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1166 |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1167 return true; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
1168 } |
|
1662
09be34b2f30e
ParsedDicomFile::Convert()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1655
diff
changeset
|
1169 |
|
09be34b2f30e
ParsedDicomFile::Convert()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1655
diff
changeset
|
1170 |
|
09be34b2f30e
ParsedDicomFile::Convert()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1655
diff
changeset
|
1171 void ParsedDicomFile::Convert(DicomMap& tags) |
|
09be34b2f30e
ParsedDicomFile::Convert()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1655
diff
changeset
|
1172 { |
|
09be34b2f30e
ParsedDicomFile::Convert()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1655
diff
changeset
|
1173 FromDcmtkBridge::Convert(tags, *pimpl_->file_->getDataset()); |
|
09be34b2f30e
ParsedDicomFile::Convert()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1655
diff
changeset
|
1174 } |
|
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1175 |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1176 |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1177 ParsedDicomFile* ParsedDicomFile::CreateFromJson(const Json::Value& json, |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1178 DicomFromJsonFlags flags) |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1179 { |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1180 std::string tmp = Configuration::GetGlobalStringParameter("DefaultEncoding", "Latin1"); |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1181 Encoding encoding = StringToEncoding(tmp.c_str()); |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1182 |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1183 Json::Value::Members tags = json.getMemberNames(); |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1184 |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1185 for (size_t i = 0; i < tags.size(); i++) |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1186 { |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1187 DicomTag tag = FromDcmtkBridge::ParseTag(tags[i]); |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1188 if (tag == DICOM_TAG_SPECIFIC_CHARACTER_SET) |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1189 { |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1190 const Json::Value& value = json[tags[i]]; |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1191 if (value.type() != Json::stringValue || |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1192 !GetDicomEncoding(encoding, value.asCString())) |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1193 { |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1194 LOG(ERROR) << "Unknown encoding while creating DICOM from JSON: " << value; |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1195 throw OrthancException(ErrorCode_BadRequest); |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1196 } |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1197 } |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1198 } |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1199 |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1200 const bool generateIdentifiers = (flags & DicomFromJsonFlags_GenerateIdentifiers); |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1201 const bool decodeDataUriScheme = (flags & DicomFromJsonFlags_DecodeDataUriScheme); |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1202 |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1203 std::auto_ptr<ParsedDicomFile> result(new ParsedDicomFile(generateIdentifiers)); |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1204 result->SetEncoding(encoding); |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1205 |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1206 for (size_t i = 0; i < tags.size(); i++) |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1207 { |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1208 DicomTag tag = FromDcmtkBridge::ParseTag(tags[i]); |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1209 const Json::Value& value = json[tags[i]]; |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1210 |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1211 if (tag == DICOM_TAG_PIXEL_DATA || |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1212 tag == DICOM_TAG_ENCAPSULATED_DOCUMENT) |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1213 { |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1214 if (value.type() != Json::stringValue) |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1215 { |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1216 throw OrthancException(ErrorCode_BadRequest); |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1217 } |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1218 else |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1219 { |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1220 result->EmbedContent(value.asString()); |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1221 } |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1222 } |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1223 else if (tag != DICOM_TAG_SPECIFIC_CHARACTER_SET) |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1224 { |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1225 result->Replace(tag, value, decodeDataUriScheme); |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1226 } |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1227 } |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1228 |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1229 return result.release(); |
|
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
1230 } |
| 790 | 1231 } |