Mercurial > hg > orthanc
annotate OrthancServer/Sources/OrthancRestApi/OrthancRestAnonymizeModify.cpp @ 4335:82652c5fc04f
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author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Tue, 01 Dec 2020 20:31:04 +0100 |
parents | 05b8fd21089c |
children | 48303e493135 |
rev | line source |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium |
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6 * |
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7 * This program is free software: you can redistribute it and/or |
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8 * modify it under the terms of the GNU General Public License as |
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9 * published by the Free Software Foundation, either version 3 of the |
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10 * License, or (at your option) any later version. |
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11 * |
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12 * In addition, as a special exception, the copyright holders of this |
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13 * program give permission to link the code of its release with the |
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14 * OpenSSL project's "OpenSSL" library (or with modified versions of it |
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15 * that use the same license as the "OpenSSL" library), and distribute |
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16 * the linked executables. You must obey the GNU General Public License |
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17 * in all respects for all of the code used other than "OpenSSL". If you |
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18 * modify file(s) with this exception, you may extend this exception to |
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19 * your version of the file(s), but you are not obligated to do so. If |
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20 * you do not wish to do so, delete this exception statement from your |
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21 * version. If you delete this exception statement from all source files |
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22 * in the program, then also delete it here. |
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23 * |
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24 * This program is distributed in the hope that it will be useful, but |
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25 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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27 * General Public License for more details. |
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28 * |
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29 * You should have received a copy of the GNU General Public License |
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30 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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31 **/ |
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32 |
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33 |
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34 #include "../PrecompiledHeadersServer.h" |
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35 #include "OrthancRestApi.h" |
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36 |
4045 | 37 #include "../../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" |
38 #include "../../../OrthancFramework/Sources/Logging.h" | |
39 #include "../../../OrthancFramework/Sources/SerializationToolbox.h" | |
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40 #include "../OrthancConfiguration.h" |
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41 #include "../ServerContext.h" |
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42 #include "../ServerJobs/MergeStudyJob.h" |
2642 | 43 #include "../ServerJobs/ResourceModificationJob.h" |
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44 #include "../ServerJobs/SplitStudyJob.h" |
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45 |
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46 #include <boost/lexical_cast.hpp> |
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47 #include <boost/algorithm/string/predicate.hpp> |
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48 |
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49 namespace Orthanc |
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50 { |
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51 // Modification of DICOM instances ------------------------------------------ |
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52 |
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53 |
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54 static std::string GeneratePatientName(ServerContext& context) |
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55 { |
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56 uint64_t seq = context.GetIndex().IncrementGlobalSequence(GlobalProperty_AnonymizationSequence); |
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57 return "Anonymized" + boost::lexical_cast<std::string>(seq); |
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58 } |
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59 |
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60 |
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61 static void ParseModifyRequest(Json::Value& request, |
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62 DicomModification& target, |
2517 | 63 const RestApiPostCall& call) |
64 { | |
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65 // curl http://localhost:8042/series/95a6e2bf-9296e2cc-bf614e2f-22b391ee-16e010e0/modify -X POST -d '{"Replace":{"InstitutionName":"My own clinic"},"Priority":9}' |
2517 | 66 |
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67 { |
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68 OrthancConfiguration::ReaderLock lock; |
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69 target.SetPrivateCreator(lock.GetConfiguration().GetDefaultPrivateCreator()); |
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70 } |
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71 |
2517 | 72 if (call.ParseJsonRequest(request)) |
73 { | |
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74 target.ParseModifyRequest(request); |
2517 | 75 } |
76 else | |
77 { | |
78 throw OrthancException(ErrorCode_BadFileFormat); | |
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79 } |
2517 | 80 } |
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81 |
2517 | 82 |
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83 static void ParseAnonymizationRequest(Json::Value& request, |
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84 DicomModification& target, |
2517 | 85 RestApiPostCall& call) |
86 { | |
87 // curl http://localhost:8042/instances/6e67da51-d119d6ae-c5667437-87b9a8a5-0f07c49f/anonymize -X POST -d '{"Replace":{"PatientName":"hello","0010-0020":"world"},"Keep":["StudyDescription", "SeriesDescription"],"KeepPrivateTags": true,"Remove":["Modality"]}' > Anonymized.dcm | |
88 | |
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89 { |
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90 OrthancConfiguration::ReaderLock lock; |
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91 target.SetPrivateCreator(lock.GetConfiguration().GetDefaultPrivateCreator()); |
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92 } |
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93 |
2517 | 94 if (call.ParseJsonRequest(request) && |
95 request.isObject()) | |
96 { | |
2518 | 97 bool patientNameReplaced; |
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98 target.ParseAnonymizationRequest(patientNameReplaced, request); |
2518 | 99 |
100 if (patientNameReplaced) | |
101 { | |
102 // Overwrite the random Patient's Name by one that is more | |
103 // user-friendly (provided none was specified by the user) | |
104 target.Replace(DICOM_TAG_PATIENT_NAME, GeneratePatientName(OrthancRestApi::GetContext(call)), true); | |
105 } | |
2517 | 106 } |
107 else | |
108 { | |
109 throw OrthancException(ErrorCode_BadFileFormat); | |
110 } | |
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111 } |
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112 |
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113 |
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114 static void AnonymizeOrModifyInstance(DicomModification& modification, |
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115 RestApiPostCall& call, |
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116 bool transcode, |
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117 DicomTransferSyntax targetSyntax) |
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118 { |
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119 ServerContext& context = OrthancRestApi::GetContext(call); |
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120 std::string id = call.GetUriComponent("id", ""); |
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121 |
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122 std::unique_ptr<ParsedDicomFile> modified; |
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123 |
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124 { |
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125 ServerContext::DicomCacheLocker locker(context, id); |
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126 modified.reset(locker.GetDicom().Clone(true)); |
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127 } |
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128 |
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129 modification.Apply(*modified); |
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130 |
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131 if (transcode) |
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132 { |
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133 IDicomTranscoder::DicomImage source; |
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134 source.AcquireParsed(*modified); // "modified" is invalid below this point |
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135 |
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136 IDicomTranscoder::DicomImage transcoded; |
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137 |
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138 std::set<DicomTransferSyntax> s; |
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139 s.insert(targetSyntax); |
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140 |
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141 if (context.Transcode(transcoded, source, s, true)) |
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142 { |
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143 call.GetOutput().AnswerBuffer(transcoded.GetBufferData(), |
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144 transcoded.GetBufferSize(), MimeType_Dicom); |
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145 } |
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146 else |
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147 { |
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148 throw OrthancException(ErrorCode_InternalError, |
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149 "Cannot transcode to transfer syntax: " + |
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150 std::string(GetTransferSyntaxUid(targetSyntax))); |
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151 } |
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152 } |
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153 else |
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154 { |
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155 modified->Answer(call.GetOutput()); |
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156 } |
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157 } |
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158 |
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159 |
974 | 160 static void ModifyInstance(RestApiPostCall& call) |
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161 { |
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162 DicomModification modification; |
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163 modification.SetAllowManualIdentifiers(true); |
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164 |
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165 Json::Value request; |
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166 ParseModifyRequest(request, modification, call); |
2517 | 167 |
168 if (modification.IsReplaced(DICOM_TAG_PATIENT_ID)) | |
169 { | |
170 modification.SetLevel(ResourceType_Patient); | |
171 } | |
172 else if (modification.IsReplaced(DICOM_TAG_STUDY_INSTANCE_UID)) | |
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173 { |
2517 | 174 modification.SetLevel(ResourceType_Study); |
175 } | |
176 else if (modification.IsReplaced(DICOM_TAG_SERIES_INSTANCE_UID)) | |
177 { | |
178 modification.SetLevel(ResourceType_Series); | |
179 } | |
180 else | |
181 { | |
182 modification.SetLevel(ResourceType_Instance); | |
183 } | |
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184 |
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185 static const char* TRANSCODE = "Transcode"; |
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186 if (request.isMember(TRANSCODE)) |
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187 { |
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188 std::string s = SerializationToolbox::ReadString(request, TRANSCODE); |
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189 |
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190 DicomTransferSyntax syntax; |
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191 if (LookupTransferSyntax(syntax, s)) |
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192 { |
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193 AnonymizeOrModifyInstance(modification, call, true, syntax); |
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194 } |
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195 else |
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196 { |
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197 throw OrthancException(ErrorCode_ParameterOutOfRange, "Unknown transfer syntax: " + s); |
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198 } |
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199 } |
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200 else |
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201 { |
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202 AnonymizeOrModifyInstance(modification, call, false /* no transcoding */, |
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203 DicomTransferSyntax_LittleEndianImplicit /* unused */); |
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204 } |
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205 } |
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206 |
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207 |
974 | 208 static void AnonymizeInstance(RestApiPostCall& call) |
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209 { |
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210 DicomModification modification; |
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211 modification.SetAllowManualIdentifiers(true); |
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212 |
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213 Json::Value request; |
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214 ParseAnonymizationRequest(request, modification, call); |
2517 | 215 |
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216 AnonymizeOrModifyInstance(modification, call, false /* no transcoding */, |
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217 DicomTransferSyntax_LittleEndianImplicit /* unused */); |
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218 } |
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219 |
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220 |
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221 static void SetKeepSource(CleaningInstancesJob& job, |
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222 const Json::Value& body) |
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223 { |
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224 static const char* KEEP_SOURCE = "KeepSource"; |
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225 if (body.isMember(KEEP_SOURCE)) |
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226 { |
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227 job.SetKeepSource(SerializationToolbox::ReadBoolean(body, KEEP_SOURCE)); |
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228 } |
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229 } |
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230 |
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231 |
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232 static void SubmitModificationJob(std::unique_ptr<DicomModification>& modification, |
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233 bool isAnonymization, |
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234 RestApiPostCall& call, |
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235 const Json::Value& body, |
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236 ResourceType level) |
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237 { |
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238 ServerContext& context = OrthancRestApi::GetContext(call); |
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239 |
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240 std::unique_ptr<ResourceModificationJob> job(new ResourceModificationJob(context)); |
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241 |
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242 job->SetModification(modification.release(), level, isAnonymization); |
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243 job->SetOrigin(call); |
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244 SetKeepSource(*job, body); |
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245 |
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246 static const char* TRANSCODE = "Transcode"; |
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247 if (body.isMember(TRANSCODE)) |
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248 { |
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249 job->SetTranscode(SerializationToolbox::ReadString(body, TRANSCODE)); |
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250 } |
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251 |
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252 context.AddChildInstances(*job, call.GetUriComponent("id", "")); |
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253 job->AddTrailingStep(); |
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254 |
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255 OrthancRestApi::GetApi(call).SubmitCommandsJob |
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256 (call, job.release(), true /* synchronous by default */, body); |
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257 } |
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258 |
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259 |
2639 | 260 template <enum ResourceType resourceType> |
974 | 261 static void ModifyResource(RestApiPostCall& call) |
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262 { |
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263 std::unique_ptr<DicomModification> modification(new DicomModification); |
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264 |
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265 Json::Value body; |
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266 ParseModifyRequest(body, *modification, call); |
2517 | 267 |
2639 | 268 modification->SetLevel(resourceType); |
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269 |
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270 SubmitModificationJob(modification, false /* not an anonymization */, |
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271 call, body, resourceType); |
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272 } |
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273 |
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274 |
2639 | 275 template <enum ResourceType resourceType> |
974 | 276 static void AnonymizeResource(RestApiPostCall& call) |
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277 { |
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278 std::unique_ptr<DicomModification> modification(new DicomModification); |
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279 |
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280 Json::Value body; |
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281 ParseAnonymizationRequest(body, *modification, call); |
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282 |
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283 SubmitModificationJob(modification, true /* anonymization */, |
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284 call, body, resourceType); |
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285 } |
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286 |
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287 |
1569 | 288 static void StoreCreatedInstance(std::string& id /* out */, |
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289 RestApiPostCall& call, |
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290 ParsedDicomFile& dicom, |
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291 bool sendAnswer) |
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292 { |
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293 DicomInstanceToStore toStore; |
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294 toStore.SetOrigin(DicomInstanceOrigin::FromRest(call)); |
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295 toStore.SetParsedDicomFile(dicom); |
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296 |
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297 ServerContext& context = OrthancRestApi::GetContext(call); |
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298 StoreStatus status = context.Store(id, toStore, StoreInstanceMode_Default); |
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299 |
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300 if (status == StoreStatus_Failure) |
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301 { |
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302 throw OrthancException(ErrorCode_CannotStoreInstance); |
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303 } |
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304 |
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305 if (sendAnswer) |
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306 { |
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307 OrthancRestApi::GetApi(call).AnswerStoredInstance(call, toStore, status, id); |
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308 } |
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309 } |
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310 |
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311 |
1569 | 312 static void CreateDicomV1(ParsedDicomFile& dicom, |
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313 RestApiPostCall& call, |
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314 const Json::Value& request) |
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315 { |
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316 // curl http://localhost:8042/tools/create-dicom -X POST -d '{"PatientName":"Hello^World"}' |
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317 // curl http://localhost:8042/tools/create-dicom -X POST -d '{"PatientName":"Hello^World","PixelData":"data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAAAAAA6mKC9AAAACXBIWXMAAAsTAAALEwEAmpwYAAAAB3RJTUUH3gUGDDcB53FulQAAAElJREFUGNNtj0sSAEEEQ1+U+185s1CtmRkblQ9CZldsKHJDk6DLGLJa6chjh0ooQmpjXMM86zPwydGEj6Ed/UGykkEM8X+p3u8/8LcOJIWLGeMAAAAASUVORK5CYII="}' |
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318 |
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319 assert(request.isObject()); |
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320 LOG(WARNING) << "Using a deprecated call to /tools/create-dicom"; |
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321 |
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322 Json::Value::Members members = request.getMemberNames(); |
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323 for (size_t i = 0; i < members.size(); i++) |
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324 { |
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325 const std::string& name = members[i]; |
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326 if (request[name].type() != Json::stringValue) |
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327 { |
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328 throw OrthancException(ErrorCode_CreateDicomNotString); |
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329 } |
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330 |
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331 std::string value = request[name].asString(); |
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332 |
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333 DicomTag tag = FromDcmtkBridge::ParseTag(name); |
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334 if (tag == DICOM_TAG_PIXEL_DATA) |
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335 { |
1562 | 336 dicom.EmbedContent(value); |
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337 } |
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338 else |
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339 { |
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340 // This is V1, don't try and decode data URI scheme |
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341 dicom.ReplacePlainString(tag, value); |
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342 } |
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343 } |
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344 } |
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345 |
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346 |
1569 | 347 static void InjectTags(ParsedDicomFile& dicom, |
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348 const Json::Value& tags, |
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349 bool decodeBinaryTags, |
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350 const std::string& privateCreator) |
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351 { |
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352 if (tags.type() != Json::objectValue) |
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353 { |
2955 | 354 throw OrthancException(ErrorCode_BadRequest, "Tags field is not an array"); |
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355 } |
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356 |
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357 // Inject the user-specified tags |
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358 Json::Value::Members members = tags.getMemberNames(); |
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359 for (size_t i = 0; i < members.size(); i++) |
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360 { |
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361 const std::string& name = members[i]; |
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362 DicomTag tag = FromDcmtkBridge::ParseTag(name); |
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363 |
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364 if (tag != DICOM_TAG_SPECIFIC_CHARACTER_SET) |
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365 { |
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366 if (tag != DICOM_TAG_PATIENT_ID && |
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367 tag != DICOM_TAG_ACQUISITION_DATE && |
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368 tag != DICOM_TAG_ACQUISITION_TIME && |
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369 tag != DICOM_TAG_CONTENT_DATE && |
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370 tag != DICOM_TAG_CONTENT_TIME && |
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371 tag != DICOM_TAG_INSTANCE_CREATION_DATE && |
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372 tag != DICOM_TAG_INSTANCE_CREATION_TIME && |
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373 tag != DICOM_TAG_SERIES_DATE && |
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374 tag != DICOM_TAG_SERIES_TIME && |
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375 tag != DICOM_TAG_STUDY_DATE && |
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376 tag != DICOM_TAG_STUDY_TIME && |
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377 dicom.HasTag(tag)) |
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378 { |
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379 throw OrthancException(ErrorCode_CreateDicomOverrideTag, name); |
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380 } |
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381 |
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382 if (tag == DICOM_TAG_PIXEL_DATA) |
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383 { |
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384 throw OrthancException(ErrorCode_CreateDicomUseContent); |
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385 } |
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386 else |
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387 { |
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388 dicom.Replace(tag, tags[name], decodeBinaryTags, DicomReplaceMode_InsertIfAbsent, privateCreator); |
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389 } |
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390 } |
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391 } |
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392 } |
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393 |
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394 |
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395 static void CreateSeries(RestApiPostCall& call, |
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396 ParsedDicomFile& base /* in */, |
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397 const Json::Value& content, |
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398 bool decodeBinaryTags, |
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399 const std::string& privateCreator) |
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400 { |
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401 assert(content.isArray()); |
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402 assert(content.size() > 0); |
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403 ServerContext& context = OrthancRestApi::GetContext(call); |
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404 |
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405 base.ReplacePlainString(DICOM_TAG_IMAGES_IN_ACQUISITION, boost::lexical_cast<std::string>(content.size())); |
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406 base.ReplacePlainString(DICOM_TAG_NUMBER_OF_TEMPORAL_POSITIONS, "1"); |
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407 |
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408 std::string someInstance; |
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409 |
1566 | 410 try |
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411 { |
1569 | 412 for (Json::ArrayIndex i = 0; i < content.size(); i++) |
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413 { |
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414 std::unique_ptr<ParsedDicomFile> dicom(base.Clone(false)); |
1566 | 415 const Json::Value* payload = NULL; |
416 | |
417 if (content[i].type() == Json::stringValue) | |
418 { | |
419 payload = &content[i]; | |
420 } | |
421 else if (content[i].type() == Json::objectValue) | |
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422 { |
1566 | 423 if (!content[i].isMember("Content")) |
424 { | |
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425 throw OrthancException(ErrorCode_CreateDicomNoPayload); |
1566 | 426 } |
427 | |
428 payload = &content[i]["Content"]; | |
429 | |
1569 | 430 if (content[i].isMember("Tags")) |
1570 | 431 { |
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432 InjectTags(*dicom, content[i]["Tags"], decodeBinaryTags, privateCreator); |
1570 | 433 } |
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434 } |
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435 |
1566 | 436 if (payload == NULL || |
437 payload->type() != Json::stringValue) | |
438 { | |
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439 throw OrthancException(ErrorCode_CreateDicomUseDataUriScheme); |
1566 | 440 } |
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441 |
1566 | 442 dicom->EmbedContent(payload->asString()); |
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443 dicom->ReplacePlainString(DICOM_TAG_INSTANCE_NUMBER, boost::lexical_cast<std::string>(i + 1)); |
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444 dicom->ReplacePlainString(DICOM_TAG_IMAGE_INDEX, boost::lexical_cast<std::string>(i + 1)); |
1566 | 445 |
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446 StoreCreatedInstance(someInstance, call, *dicom, false); |
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447 } |
1566 | 448 } |
1616 | 449 catch (OrthancException&) |
1566 | 450 { |
1569 | 451 // Error: Remove the newly-created series |
452 | |
453 std::string series; | |
454 if (context.GetIndex().LookupParent(series, someInstance)) | |
1570 | 455 { |
1569 | 456 Json::Value dummy; |
457 context.GetIndex().DeleteResource(dummy, series, ResourceType_Series); | |
1570 | 458 } |
1569 | 459 |
1616 | 460 throw; |
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461 } |
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462 |
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463 std::string series; |
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464 if (context.GetIndex().LookupParent(series, someInstance)) |
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465 { |
1569 | 466 OrthancRestApi::GetApi(call).AnswerStoredResource(call, series, ResourceType_Series, StoreStatus_Success); |
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467 } |
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468 } |
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469 |
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470 |
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471 static void CreateDicomV2(RestApiPostCall& call, |
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472 const Json::Value& request) |
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473 { |
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474 assert(request.isObject()); |
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475 ServerContext& context = OrthancRestApi::GetContext(call); |
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476 |
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477 if (!request.isMember("Tags") || |
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478 request["Tags"].type() != Json::objectValue) |
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479 { |
1569 | 480 throw OrthancException(ErrorCode_BadRequest); |
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481 } |
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482 |
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483 ParsedDicomFile dicom(true); |
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484 |
1557 | 485 { |
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486 Encoding encoding; |
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487 |
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488 if (request["Tags"].isMember("SpecificCharacterSet")) |
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489 { |
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490 const char* tmp = request["Tags"]["SpecificCharacterSet"].asCString(); |
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491 if (!GetDicomEncoding(encoding, tmp)) |
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492 { |
2955 | 493 throw OrthancException(ErrorCode_ParameterOutOfRange, |
494 "Unknown specific character set: " + std::string(tmp)); | |
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495 } |
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496 } |
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497 else |
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498 { |
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499 encoding = GetDefaultDicomEncoding(); |
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500 } |
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501 |
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502 dicom.SetEncoding(encoding); |
1557 | 503 } |
504 | |
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505 ResourceType parentType = ResourceType_Instance; |
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506 |
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507 if (request.isMember("Parent")) |
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508 { |
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509 // Locate the parent tags |
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510 std::string parent = request["Parent"].asString(); |
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511 if (!context.GetIndex().LookupResourceType(parentType, parent)) |
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512 { |
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513 throw OrthancException(ErrorCode_CreateDicomBadParent); |
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514 } |
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515 |
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516 if (parentType == ResourceType_Instance) |
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517 { |
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518 throw OrthancException(ErrorCode_CreateDicomParentIsInstance); |
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519 } |
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520 |
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521 // Select one existing child instance of the parent resource, to |
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522 // retrieve all its tags |
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Creation of DICOM files with encapsulated PDF
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523 Json::Value siblingTags; |
3009
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524 std::string siblingInstanceId; |
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525 |
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526 { |
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527 // Retrieve all the instances of the parent resource |
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528 std::list<std::string> siblingInstances; |
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529 context.GetIndex().GetChildInstances(siblingInstances, parent); |
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530 |
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531 if (siblingInstances.empty()) |
1569 | 532 { |
533 // Error: No instance (should never happen) | |
534 throw OrthancException(ErrorCode_InternalError); | |
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535 } |
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536 |
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537 siblingInstanceId = siblingInstances.front(); |
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538 context.ReadDicomAsJson(siblingTags, siblingInstanceId); |
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539 } |
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540 |
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541 |
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542 // Choose the same encoding as the parent resource |
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543 { |
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544 static const char* SPECIFIC_CHARACTER_SET = "0008,0005"; |
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545 |
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546 if (siblingTags.isMember(SPECIFIC_CHARACTER_SET)) |
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547 { |
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548 Encoding encoding; |
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549 |
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550 if (!siblingTags[SPECIFIC_CHARACTER_SET].isMember("Value") || |
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551 siblingTags[SPECIFIC_CHARACTER_SET]["Value"].type() != Json::stringValue || |
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552 !GetDicomEncoding(encoding, siblingTags[SPECIFIC_CHARACTER_SET]["Value"].asCString())) |
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553 { |
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554 LOG(WARNING) << "Instance with an incorrect Specific Character Set, " |
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555 << "using the default Orthanc encoding: " << siblingInstanceId; |
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556 encoding = GetDefaultDicomEncoding(); |
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557 } |
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558 |
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559 dicom.SetEncoding(encoding); |
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560 } |
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561 } |
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562 |
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563 |
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564 // Retrieve the tags for all the parent modules |
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565 typedef std::set<DicomTag> ModuleTags; |
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566 ModuleTags moduleTags; |
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567 |
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Creation of DICOM files with encapsulated PDF
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568 ResourceType type = parentType; |
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569 for (;;) |
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570 { |
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571 DicomTag::AddTagsForModule(moduleTags, GetModule(type)); |
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572 |
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573 if (type == ResourceType_Patient) |
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574 { |
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575 break; // We're done |
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576 } |
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577 |
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578 // Go up |
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579 std::string tmp; |
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580 if (!context.GetIndex().LookupParent(tmp, parent)) |
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581 { |
1569 | 582 throw OrthancException(ErrorCode_InternalError); |
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583 } |
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584 |
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585 parent = tmp; |
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586 type = GetParentResourceType(type); |
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587 } |
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588 |
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589 for (ModuleTags::const_iterator it = moduleTags.begin(); |
1616 | 590 it != moduleTags.end(); ++it) |
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591 { |
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592 std::string t = it->Format(); |
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593 if (siblingTags.isMember(t)) |
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594 { |
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595 const Json::Value& tag = siblingTags[t]; |
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596 if (tag["Type"] == "Null") |
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597 { |
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598 dicom.ReplacePlainString(*it, ""); |
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599 } |
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600 else if (tag["Type"] == "String") |
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601 { |
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602 std::string value = tag["Value"].asString(); // This is an UTF-8 value (as it comes from JSON) |
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603 dicom.ReplacePlainString(*it, value); |
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604 } |
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605 } |
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606 } |
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607 } |
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608 |
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609 |
1689 | 610 bool decodeBinaryTags = true; |
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611 if (request.isMember("InterpretBinaryTags")) |
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612 { |
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613 const Json::Value& v = request["InterpretBinaryTags"]; |
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614 if (v.type() != Json::booleanValue) |
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615 { |
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616 throw OrthancException(ErrorCode_BadRequest); |
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617 } |
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618 |
1689 | 619 decodeBinaryTags = v.asBool(); |
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620 } |
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621 |
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622 |
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623 // New argument in Orthanc 1.6.0 |
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624 std::string privateCreator; |
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625 if (request.isMember("PrivateCreator")) |
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626 { |
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627 const Json::Value& v = request["PrivateCreator"]; |
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628 if (v.type() != Json::stringValue) |
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629 { |
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630 throw OrthancException(ErrorCode_BadRequest); |
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631 } |
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632 |
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633 privateCreator = v.asString(); |
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634 } |
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635 else |
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636 { |
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637 OrthancConfiguration::ReaderLock lock; |
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638 privateCreator = lock.GetConfiguration().GetDefaultPrivateCreator(); |
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Fix issue #168 (Plugins can't read private tags from the configuration file)
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639 } |
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diff
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|
640 |
1565
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|
641 |
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Creation of DICOM files with encapsulated PDF
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642 // Inject time-related information |
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Creation of DICOM files with encapsulated PDF
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changeset
|
643 std::string date, time; |
2475
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Orthanc now uses UTC (universal time) instead of local time in its database
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diff
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|
644 SystemToolbox::GetNowDicom(date, time, true /* use UTC time (not local time) */); |
1982
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Modification of instances can now replace PixelData
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diff
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|
645 dicom.ReplacePlainString(DICOM_TAG_ACQUISITION_DATE, date); |
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Modification of instances can now replace PixelData
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diff
changeset
|
646 dicom.ReplacePlainString(DICOM_TAG_ACQUISITION_TIME, time); |
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Modification of instances can now replace PixelData
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diff
changeset
|
647 dicom.ReplacePlainString(DICOM_TAG_CONTENT_DATE, date); |
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Modification of instances can now replace PixelData
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diff
changeset
|
648 dicom.ReplacePlainString(DICOM_TAG_CONTENT_TIME, time); |
b5d4f9c156ad
Modification of instances can now replace PixelData
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diff
changeset
|
649 dicom.ReplacePlainString(DICOM_TAG_INSTANCE_CREATION_DATE, date); |
b5d4f9c156ad
Modification of instances can now replace PixelData
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1934
diff
changeset
|
650 dicom.ReplacePlainString(DICOM_TAG_INSTANCE_CREATION_TIME, time); |
1555
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Creation of DICOM files with encapsulated PDF
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changeset
|
651 |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
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changeset
|
652 if (parentType == ResourceType_Patient || |
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Creation of DICOM files with encapsulated PDF
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changeset
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653 parentType == ResourceType_Study || |
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Creation of DICOM files with encapsulated PDF
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changeset
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654 parentType == ResourceType_Instance /* no parent */) |
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Creation of DICOM files with encapsulated PDF
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changeset
|
655 { |
1982
b5d4f9c156ad
Modification of instances can now replace PixelData
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parents:
1934
diff
changeset
|
656 dicom.ReplacePlainString(DICOM_TAG_SERIES_DATE, date); |
b5d4f9c156ad
Modification of instances can now replace PixelData
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diff
changeset
|
657 dicom.ReplacePlainString(DICOM_TAG_SERIES_TIME, time); |
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changeset
|
658 } |
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Creation of DICOM files with encapsulated PDF
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changeset
|
659 |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
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changeset
|
660 if (parentType == ResourceType_Patient || |
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Creation of DICOM files with encapsulated PDF
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changeset
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661 parentType == ResourceType_Instance /* no parent */) |
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Creation of DICOM files with encapsulated PDF
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662 { |
1982
b5d4f9c156ad
Modification of instances can now replace PixelData
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parents:
1934
diff
changeset
|
663 dicom.ReplacePlainString(DICOM_TAG_STUDY_DATE, date); |
b5d4f9c156ad
Modification of instances can now replace PixelData
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parents:
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diff
changeset
|
664 dicom.ReplacePlainString(DICOM_TAG_STUDY_TIME, time); |
1555
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Creation of DICOM files with encapsulated PDF
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changeset
|
665 } |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
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changeset
|
666 |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
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parents:
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changeset
|
667 |
3691
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Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
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diff
changeset
|
668 InjectTags(dicom, request["Tags"], decodeBinaryTags, privateCreator); |
1555
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Creation of DICOM files with encapsulated PDF
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changeset
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669 |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
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changeset
|
670 |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
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changeset
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671 // Inject the content (either an image, or a PDF file) |
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Creation of DICOM files with encapsulated PDF
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changeset
|
672 if (request.isMember("Content")) |
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|
673 { |
1564
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parents:
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674 const Json::Value& content = request["Content"]; |
1b7def486e62
creation of DICOM series
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diff
changeset
|
675 |
1b7def486e62
creation of DICOM series
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parents:
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diff
changeset
|
676 if (content.type() == Json::stringValue) |
1b7def486e62
creation of DICOM series
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diff
changeset
|
677 { |
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creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
678 dicom.EmbedContent(request["Content"].asString()); |
1b7def486e62
creation of DICOM series
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diff
changeset
|
679 |
1b7def486e62
creation of DICOM series
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parents:
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diff
changeset
|
680 } |
1b7def486e62
creation of DICOM series
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diff
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|
681 else if (content.type() == Json::arrayValue) |
1b7def486e62
creation of DICOM series
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diff
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|
682 { |
1b7def486e62
creation of DICOM series
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diff
changeset
|
683 if (content.size() > 0) |
1b7def486e62
creation of DICOM series
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parents:
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diff
changeset
|
684 { |
1565
4b23310eb7e8
add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
685 // Let's create a series instead of a single instance |
3691
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Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
686 CreateSeries(call, dicom, content, decodeBinaryTags, privateCreator); |
1564
1b7def486e62
creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
687 return; |
1b7def486e62
creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
688 } |
1b7def486e62
creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
689 } |
1b7def486e62
creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
690 else |
1555
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Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
691 { |
1582
bd1889029cbb
encoding of exceptions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1572
diff
changeset
|
692 throw OrthancException(ErrorCode_CreateDicomUseDataUriScheme); |
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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changeset
|
693 } |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
694 } |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
695 |
1564
1b7def486e62
creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1562
diff
changeset
|
696 std::string id; |
2899
5dd649de253d
POST-ing a DICOM file to "/instances" also answers the patient/study/series ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2869
diff
changeset
|
697 StoreCreatedInstance(id, call, dicom, true); |
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
698 } |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
699 |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
700 |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
701 static void CreateDicom(RestApiPostCall& call) |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
702 { |
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
703 Json::Value request; |
1569 | 704 if (!call.ParseJsonRequest(request) || |
705 !request.isObject()) | |
1570 | 706 { |
707 throw OrthancException(ErrorCode_BadRequest); | |
708 } | |
1569 | 709 |
710 if (request.isMember("Tags")) | |
1570 | 711 { |
712 CreateDicomV2(call, request); | |
713 } | |
1569 | 714 else |
1570 | 715 { |
716 // Compatibility with Orthanc <= 0.9.3 | |
1805
f08978b1f45b
c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1699
diff
changeset
|
717 ParsedDicomFile dicom(true); |
1572
904096e7367e
More information about the origin request in OnStoredInstance() callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1570
diff
changeset
|
718 CreateDicomV1(dicom, call, request); |
1569 | 719 |
1570 | 720 std::string id; |
2899
5dd649de253d
POST-ing a DICOM file to "/instances" also answers the patient/study/series ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2869
diff
changeset
|
721 StoreCreatedInstance(id, call, dicom, true); |
1570 | 722 } |
796
e7b1ca0f1e04
creation of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
795
diff
changeset
|
723 } |
e7b1ca0f1e04
creation of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
795
diff
changeset
|
724 |
e7b1ca0f1e04
creation of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
795
diff
changeset
|
725 |
2844
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
726 static void SplitStudy(RestApiPostCall& call) |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
727 { |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
728 ServerContext& context = OrthancRestApi::GetContext(call); |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
729 |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
730 Json::Value request; |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2825
diff
changeset
|
731 if (!call.ParseJsonRequest(request)) |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
732 { |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
733 // Bad JSON request |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
734 throw OrthancException(ErrorCode_BadFileFormat); |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2825
diff
changeset
|
735 } |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
736 |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2825
diff
changeset
|
737 const std::string study = call.GetUriComponent("id", ""); |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
738 |
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3709
diff
changeset
|
739 std::unique_ptr<SplitStudyJob> job(new SplitStudyJob(context, study)); |
2844
99863d6245b2
New URI: "/studies/.../split" to split a study
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parents:
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diff
changeset
|
740 job->SetOrigin(call); |
99863d6245b2
New URI: "/studies/.../split" to split a study
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parents:
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diff
changeset
|
741 |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
742 std::vector<std::string> series; |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
743 SerializationToolbox::ReadArrayOfStrings(series, request, "Series"); |
99863d6245b2
New URI: "/studies/.../split" to split a study
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parents:
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diff
changeset
|
744 |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2825
diff
changeset
|
745 for (size_t i = 0; i < series.size(); i++) |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
746 { |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
747 job->AddSourceSeries(series[i]); |
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New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
748 } |
3942
5b882ad2ffd0
"/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
749 |
2860 | 750 job->AddTrailingStep(); |
751 | |
3942
5b882ad2ffd0
"/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
752 SetKeepSource(*job, request); |
2844
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2825
diff
changeset
|
753 |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
754 static const char* REMOVE = "Remove"; |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
755 if (request.isMember(REMOVE)) |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
756 { |
99863d6245b2
New URI: "/studies/.../split" to split a study
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parents:
2825
diff
changeset
|
757 if (request[REMOVE].type() != Json::arrayValue) |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
758 { |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
759 throw OrthancException(ErrorCode_BadFileFormat); |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
760 } |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
761 |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2825
diff
changeset
|
762 for (Json::Value::ArrayIndex i = 0; i < request[REMOVE].size(); i++) |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2825
diff
changeset
|
763 { |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
764 if (request[REMOVE][i].type() != Json::stringValue) |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2825
diff
changeset
|
765 { |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
766 throw OrthancException(ErrorCode_BadFileFormat); |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
767 } |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2825
diff
changeset
|
768 else |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
769 { |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2825
diff
changeset
|
770 job->Remove(FromDcmtkBridge::ParseTag(request[REMOVE][i].asCString())); |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
771 } |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2825
diff
changeset
|
772 } |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
773 } |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
774 |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
775 static const char* REPLACE = "Replace"; |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2825
diff
changeset
|
776 if (request.isMember(REPLACE)) |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
777 { |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
778 if (request[REPLACE].type() != Json::objectValue) |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
779 { |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
780 throw OrthancException(ErrorCode_BadFileFormat); |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
781 } |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
782 |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
783 Json::Value::Members tags = request[REPLACE].getMemberNames(); |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
784 |
99863d6245b2
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
785 for (size_t i = 0; i < tags.size(); i++) |
99863d6245b2
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
786 { |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
787 const Json::Value& value = request[REPLACE][tags[i]]; |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
788 |
99863d6245b2
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diff
changeset
|
789 if (value.type() != Json::stringValue) |
99863d6245b2
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
790 { |
99863d6245b2
New URI: "/studies/.../split" to split a study
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diff
changeset
|
791 throw OrthancException(ErrorCode_BadFileFormat); |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
792 } |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
793 else |
99863d6245b2
New URI: "/studies/.../split" to split a study
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diff
changeset
|
794 { |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
795 job->Replace(FromDcmtkBridge::ParseTag(tags[i]), value.asString()); |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
796 } |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
797 } |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
798 } |
99863d6245b2
New URI: "/studies/.../split" to split a study
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parents:
2825
diff
changeset
|
799 |
2869 | 800 OrthancRestApi::GetApi(call).SubmitCommandsJob |
801 (call, job.release(), true /* synchronous by default */, request); | |
2844
99863d6245b2
New URI: "/studies/.../split" to split a study
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parents:
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diff
changeset
|
802 } |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
803 |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2825
diff
changeset
|
804 |
2853
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
805 static void MergeStudy(RestApiPostCall& call) |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
806 { |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
807 ServerContext& context = OrthancRestApi::GetContext(call); |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
808 |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
809 Json::Value request; |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
810 if (!call.ParseJsonRequest(request)) |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
811 { |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
812 // Bad JSON request |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
813 throw OrthancException(ErrorCode_BadFileFormat); |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
814 } |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
815 |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
816 const std::string study = call.GetUriComponent("id", ""); |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
817 |
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3709
diff
changeset
|
818 std::unique_ptr<MergeStudyJob> job(new MergeStudyJob(context, study)); |
2853
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
819 job->SetOrigin(call); |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
820 |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
821 std::vector<std::string> resources; |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
822 SerializationToolbox::ReadArrayOfStrings(resources, request, "Resources"); |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
823 |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
824 for (size_t i = 0; i < resources.size(); i++) |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
825 { |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
826 job->AddSource(resources[i]); |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
827 } |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
828 |
2860 | 829 job->AddTrailingStep(); |
830 | |
3942
5b882ad2ffd0
"/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
831 SetKeepSource(*job, request); |
2853
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
832 |
2869 | 833 OrthancRestApi::GetApi(call).SubmitCommandsJob |
834 (call, job.release(), true /* synchronous by default */, request); | |
2853
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
835 } |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
836 |
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
837 |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
838 void OrthancRestApi::RegisterAnonymizeModify() |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
839 { |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
840 Register("/instances/{id}/modify", ModifyInstance); |
2639 | 841 Register("/series/{id}/modify", ModifyResource<ResourceType_Series>); |
842 Register("/studies/{id}/modify", ModifyResource<ResourceType_Study>); | |
843 Register("/patients/{id}/modify", ModifyResource<ResourceType_Patient>); | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
844 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
845 Register("/instances/{id}/anonymize", AnonymizeInstance); |
2639 | 846 Register("/series/{id}/anonymize", AnonymizeResource<ResourceType_Series>); |
847 Register("/studies/{id}/anonymize", AnonymizeResource<ResourceType_Study>); | |
848 Register("/patients/{id}/anonymize", AnonymizeResource<ResourceType_Patient>); | |
796
e7b1ca0f1e04
creation of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
795
diff
changeset
|
849 |
1120
009dce4ea2f6
/tools/create-dicom now accepts PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1010
diff
changeset
|
850 Register("/tools/create-dicom", CreateDicom); |
2844
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
851 |
99863d6245b2
New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2825
diff
changeset
|
852 Register("/studies/{id}/split", SplitStudy); |
2853
52b017d22a4f
New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2844
diff
changeset
|
853 Register("/studies/{id}/merge", MergeStudy); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
854 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
855 } |