Mercurial > hg > orthanc

annotate OrthancServer/Sources/Database/ResourcesContent.cpp @ 4880:81dfdcf16e16

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author Alain Mazy <am@osimis.io>
date Wed, 19 Jan 2022 17:06:22 +0100
parents 43e613a7756b
children 6eff25f70121
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2022 Osimis S.A., Belgium
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6 * Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium
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7 *
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8 * This program is free software: you can redistribute it and/or
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9 * modify it under the terms of the GNU General Public License as
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10 * published by the Free Software Foundation, either version 3 of the
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11 * License, or (at your option) any later version.
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12 *
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13 * In addition, as a special exception, the copyright holders of this
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14 * program give permission to link the code of its release with the
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15 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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16 * that use the same license as the "OpenSSL" library), and distribute
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17 * the linked executables. You must obey the GNU General Public License
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18 * in all respects for all of the code used other than "OpenSSL". If you
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19 * modify file(s) with this exception, you may extend this exception to
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20 * your version of the file(s), but you are not obligated to do so. If
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21 * you do not wish to do so, delete this exception statement from your
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22 * version. If you delete this exception statement from all source files
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23 * in the program, then also delete it here.
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24 *
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25 * This program is distributed in the hope that it will be useful, but
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26 * WITHOUT ANY WARRANTY; without even the implied warranty of
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27 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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28 * General Public License for more details.
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29 *
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30 * You should have received a copy of the GNU General Public License
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31 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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32 **/
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33
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34
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35 #include "../PrecompiledHeadersServer.h"
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36 #include "ResourcesContent.h"
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37
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38 #include "Compatibility/ISetResourcesContent.h"
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39 #include "../ServerToolbox.h"
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40
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41 #include "../../../OrthancFramework/Sources/DicomFormat/DicomArray.h"
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42 #include "../../../OrthancFramework/Sources/OrthancException.h"
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43
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44 #include <cassert>
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45
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46
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47 namespace Orthanc
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48 {
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49 static void StoreMainDicomTagsInternal(ResourcesContent& target,
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50 int64_t resource,
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51 const DicomMap& tags)
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52 {
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53 DicomArray flattened(tags);
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54
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55 for (size_t i = 0; i < flattened.GetSize(); i++)
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56 {
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57 const DicomElement& element = flattened.GetElement(i);
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58 const DicomTag& tag = element.GetTag();
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59 const DicomValue& value = element.GetValue();
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60 if (!value.IsNull() &&
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61 !value.IsBinary())
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62 {
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63 target.AddMainDicomTag(resource, tag, element.GetValue().GetContent());
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64 }
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65 }
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66 }
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67
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68
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69 static void StoreIdentifiers(ResourcesContent& target,
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70 int64_t resource,
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71 ResourceType level,
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72 const DicomMap& map)
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73 {
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74 const DicomTag* tags;
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75 size_t size;
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76
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77 ServerToolbox::LoadIdentifiers(tags, size, level);
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78
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79 for (size_t i = 0; i < size; i++)
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80 {
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81 // The identifiers tags are a subset of the main DICOM tags
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82 assert(DicomMap::IsMainDicomTag(tags[i]));
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83
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84 const DicomValue* value = map.TestAndGetValue(tags[i]);
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85 if (value != NULL &&
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86 !value->IsNull() &&
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87 !value->IsBinary())
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88 {
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89 std::string s = ServerToolbox::NormalizeIdentifier(value->GetContent());
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90 target.AddIdentifierTag(resource, tags[i], s);
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91 }
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92 }
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93 }
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94
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95
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96 void ResourcesContent::AddMetadata(int64_t resourceId,
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97 MetadataType metadata,
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98 const std::string& value)
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99 {
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100 if (isNewResource_)
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101 {
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102 metadata_.push_back(Metadata(resourceId, metadata, value));
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103 }
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104 else
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105 {
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106 // This would require to handle the incrementation of revision
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107 // numbers in the database backend => only allow setting
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108 // metadata on new resources
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109 throw OrthancException(ErrorCode_NotImplemented);
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110 }
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111 }
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112
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113
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114 void ResourcesContent::AddResource(int64_t resource,
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115 ResourceType level,
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116 const DicomMap& dicomSummary)
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117 {
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118 StoreIdentifiers(*this, resource, level, dicomSummary);
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119
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120 DicomMap tags;
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121
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122 switch (level)
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123 {
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124 case ResourceType_Patient:
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125 dicomSummary.ExtractPatientInformation(tags);
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126 break;
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127
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128 case ResourceType_Study:
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129 // Duplicate the patient tags at the study level (new in Orthanc 0.9.5 - db v6)
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130 dicomSummary.ExtractPatientInformation(tags);
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131 StoreMainDicomTagsInternal(*this, resource, tags);
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132
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133 dicomSummary.ExtractStudyInformation(tags);
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134 break;
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135
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136 case ResourceType_Series:
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137 dicomSummary.ExtractSeriesInformation(tags);
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138 break;
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139
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140 case ResourceType_Instance:
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141 dicomSummary.ExtractInstanceInformation(tags);
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142 break;
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143
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144 default:
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145 throw OrthancException(ErrorCode_InternalError);
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146 }
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147
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148 StoreMainDicomTagsInternal(*this, resource, tags);
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149 }
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150
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151
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152 void ResourcesContent::Store(Compatibility::ISetResourcesContent& compatibility) const
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153 {
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154 for (std::list<TagValue>::const_iterator
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155 it = tags_.begin(); it != tags_.end(); ++it)
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156 {
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157 if (it->isIdentifier_)
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158 {
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159 compatibility.SetIdentifierTag(it->resourceId_, it->tag_, it->value_);
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160 }
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161 else
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162 {
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163 compatibility.SetMainDicomTag(it->resourceId_, it->tag_, it->value_);
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164 }
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165 }
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166
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167 for (std::list<Metadata>::const_iterator
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168 it = metadata_.begin(); it != metadata_.end(); ++it)
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169 {
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170 assert(isNewResource_);
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171 compatibility.SetMetadata(it->resourceId_, it->metadata_, it->value_, 0 /* initial revision number */);
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172 }
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173 }
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174 }