orthanc: OrthancServer/ServerIndex.cpp annotate

annotate OrthancServer/ServerIndex.cpp @ 983:80d4f1618b33 plugins

Sample plugin to replace DCMTK by GDCM when decoding images

author	Sebastien Jodogne <s.jodogne@gmail.com>
date	Tue, 01 Jul 2014 12:01:58 +0200
parents	84513f2ee1f3
children	c2c28dd17e87 b067017a8a5b

rev	line source
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1 /**
62 a70bb32802ae renaming Server Sebastien Jodogne <s.jodogne@gmail.com> parents: 57 diff changeset	2 * Orthanc - A Lightweight, RESTful DICOM Store
689 2d0a347e8cfc switch to 2014 Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	3 * Copyright (C) 2012-2014 Medical Physics Department, CHU of Liege,
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	4 * Belgium
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	5 *
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	6 * This program is free software: you can redistribute it and/or
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	7 * modify it under the terms of the GNU General Public License as
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	8 * published by the Free Software Foundation, either version 3 of the
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	9 * License, or (at your option) any later version.
136 fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 108 diff changeset	10 *
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 108 diff changeset	11 * In addition, as a special exception, the copyright holders of this
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 108 diff changeset	12 * program give permission to link the code of its release with the
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 108 diff changeset	13 * OpenSSL project's "OpenSSL" library (or with modified versions of it
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 108 diff changeset	14 * that use the same license as the "OpenSSL" library), and distribute
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 108 diff changeset	15 * the linked executables. You must obey the GNU General Public License
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 108 diff changeset	16 * in all respects for all of the code used other than "OpenSSL". If you
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 108 diff changeset	17 * modify file(s) with this exception, you may extend this exception to
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 108 diff changeset	18 * your version of the file(s), but you are not obligated to do so. If
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 108 diff changeset	19 * you do not wish to do so, delete this exception statement from your
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 108 diff changeset	20 * version. If you delete this exception statement from all source files
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 108 diff changeset	21 * in the program, then also delete it here.
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	22 *
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	23 * This program is distributed in the hope that it will be useful, but
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	24 * WITHOUT ANY WARRANTY; without even the implied warranty of
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	26 * General Public License for more details.
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	27 *
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	28 * You should have received a copy of the GNU General Public License
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	29 * along with this program. If not, see <http://www.gnu.org/licenses/>.
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	30 **/
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	31
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	32
831 84513f2ee1f3 pch for unit tests and server Sebastien Jodogne <s.jodogne@gmail.com> parents: 824 diff changeset	33 #include "PrecompiledHeadersServer.h"
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	34 #include "ServerIndex.h"
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	35
6 9d483cf71d17 fix warnings Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	36 #ifndef NOMINMAX
2 67a6978503b7 fixing Windows build Jodogne@Laptop parents: 0 diff changeset	37 #define NOMINMAX
6 9d483cf71d17 fix warnings Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	38 #endif
9d483cf71d17 fix warnings Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	39
8 3a584803783e build with visual studio jodogne parents: 6 diff changeset	40 #include "EmbeddedResources.h"
511 3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	41 #include "OrthancInitialization.h"
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	42 #include "../Core/Toolbox.h"
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	43 #include "../Core/Uuid.h"
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	44 #include "../Core/DicomFormat/DicomArray.h"
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	45 #include "../Core/SQLite/Transaction.h"
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	46 #include "FromDcmtkBridge.h"
226 8a26a8e85edf refactoring to read files Sebastien Jodogne <s.jodogne@gmail.com> parents: 224 diff changeset	47 #include "ServerContext.h"
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	48
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	49 #include <boost/lexical_cast.hpp>
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	50 #include <stdio.h>
108 a6e41de88a53 using glog Sebastien Jodogne <s.jodogne@gmail.com> parents: 84 diff changeset	51 #include <glog/logging.h>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	52
440 23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	53 static const uint64_t MEGA_BYTES = 1024 * 1024;
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	54
62 a70bb32802ae renaming Server Sebastien Jodogne <s.jodogne@gmail.com> parents: 57 diff changeset	55 namespace Orthanc
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	56 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	57 namespace Internals
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	58 {
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	59 class ServerIndexListener : public IServerIndexListener
201 bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	60 {
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	61 private:
226 8a26a8e85edf refactoring to read files Sebastien Jodogne <s.jodogne@gmail.com> parents: 224 diff changeset	62 ServerContext& context_;
201 bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	63 bool hasRemainingLevel_;
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	64 ResourceType remainingType_;
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	65 std::string remainingPublicId_;
264 5b8e8b74bc8b remove files only after the sqlite transaction has succeeded Sebastien Jodogne <s.jodogne@gmail.com> parents: 240 diff changeset	66 std::list<std::string> pendingFilesToRemove_;
278 771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	67 uint64_t sizeOfFilesToRemove_;
201 bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	68
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	69 public:
226 8a26a8e85edf refactoring to read files Sebastien Jodogne <s.jodogne@gmail.com> parents: 224 diff changeset	70 ServerIndexListener(ServerContext& context) :
278 771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	71 context_(context)
201 bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	72 {
278 771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	73 Reset();
201 bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	74 assert(ResourceType_Patient < ResourceType_Study &&
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	75 ResourceType_Study < ResourceType_Series &&
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	76 ResourceType_Series < ResourceType_Instance);
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	77 }
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	78
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	79 void Reset()
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	80 {
278 771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	81 sizeOfFilesToRemove_ = 0;
201 bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	82 hasRemainingLevel_ = false;
264 5b8e8b74bc8b remove files only after the sqlite transaction has succeeded Sebastien Jodogne <s.jodogne@gmail.com> parents: 240 diff changeset	83 pendingFilesToRemove_.clear();
5b8e8b74bc8b remove files only after the sqlite transaction has succeeded Sebastien Jodogne <s.jodogne@gmail.com> parents: 240 diff changeset	84 }
5b8e8b74bc8b remove files only after the sqlite transaction has succeeded Sebastien Jodogne <s.jodogne@gmail.com> parents: 240 diff changeset	85
278 771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	86 uint64_t GetSizeOfFilesToRemove()
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	87 {
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	88 return sizeOfFilesToRemove_;
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	89 }
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	90
264 5b8e8b74bc8b remove files only after the sqlite transaction has succeeded Sebastien Jodogne <s.jodogne@gmail.com> parents: 240 diff changeset	91 void CommitFilesToRemove()
5b8e8b74bc8b remove files only after the sqlite transaction has succeeded Sebastien Jodogne <s.jodogne@gmail.com> parents: 240 diff changeset	92 {
5b8e8b74bc8b remove files only after the sqlite transaction has succeeded Sebastien Jodogne <s.jodogne@gmail.com> parents: 240 diff changeset	93 for (std::list<std::string>::iterator
5b8e8b74bc8b remove files only after the sqlite transaction has succeeded Sebastien Jodogne <s.jodogne@gmail.com> parents: 240 diff changeset	94 it = pendingFilesToRemove_.begin();
656 08eca5d86aad fixes to cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 646 diff changeset	95 it != pendingFilesToRemove_.end(); ++it)
264 5b8e8b74bc8b remove files only after the sqlite transaction has succeeded Sebastien Jodogne <s.jodogne@gmail.com> parents: 240 diff changeset	96 {
5b8e8b74bc8b remove files only after the sqlite transaction has succeeded Sebastien Jodogne <s.jodogne@gmail.com> parents: 240 diff changeset	97 context_.RemoveFile(*it);
5b8e8b74bc8b remove files only after the sqlite transaction has succeeded Sebastien Jodogne <s.jodogne@gmail.com> parents: 240 diff changeset	98 }
201 bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	99 }
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	100
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	101 virtual void SignalRemainingAncestor(ResourceType parentType,
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	102 const std::string& publicId)
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	103 {
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	104 LOG(INFO) << "Remaining ancestor \"" << publicId << "\" (" << parentType << ")";
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	105
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	106 if (hasRemainingLevel_)
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	107 {
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	108 if (parentType < remainingType_)
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	109 {
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	110 remainingType_ = parentType;
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	111 remainingPublicId_ = publicId;
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	112 }
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	113 }
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	114 else
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	115 {
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	116 hasRemainingLevel_ = true;
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	117 remainingType_ = parentType;
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	118 remainingPublicId_ = publicId;
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	119 }
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	120 }
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	121
273 d384af918264 more detailed signal about deleted file Sebastien Jodogne <s.jodogne@gmail.com> parents: 272 diff changeset	122 virtual void SignalFileDeleted(const FileInfo& info)
201 bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	123 {
273 d384af918264 more detailed signal about deleted file Sebastien Jodogne <s.jodogne@gmail.com> parents: 272 diff changeset	124 assert(Toolbox::IsUuid(info.GetUuid()));
d384af918264 more detailed signal about deleted file Sebastien Jodogne <s.jodogne@gmail.com> parents: 272 diff changeset	125 pendingFilesToRemove_.push_back(info.GetUuid());
278 771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	126 sizeOfFilesToRemove_ += info.GetCompressedSize();
201 bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	127 }
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	128
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	129 bool HasRemainingLevel() const
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	130 {
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	131 return hasRemainingLevel_;
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	132 }
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	133
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	134 ResourceType GetRemainingType() const
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	135 {
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	136 assert(HasRemainingLevel());
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	137 return remainingType_;
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	138 }
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	139
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	140 const std::string& GetRemainingPublicId() const
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	141 {
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	142 assert(HasRemainingLevel());
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	143 return remainingPublicId_;
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	144 }
bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	145 };
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	146 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	147
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	148
278 771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	149 class ServerIndex::Transaction
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	150 {
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	151 private:
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	152 ServerIndex& index_;
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	153 std::auto_ptr<SQLite::Transaction> transaction_;
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	154 bool isCommitted_;
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	155
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	156 public:
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	157 Transaction(ServerIndex& index) :
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	158 index_(index),
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	159 isCommitted_(false)
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	160 {
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	161 assert(index_.currentStorageSize_ == index_.db_->GetTotalCompressedSize());
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	162
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	163 index_.listener_->Reset();
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	164 transaction_.reset(index_.db_->StartTransaction());
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	165 transaction_->Begin();
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	166 }
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	167
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	168 void Commit(uint64_t sizeOfAddedFiles)
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	169 {
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	170 if (!isCommitted_)
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	171 {
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	172 transaction_->Commit();
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	173
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	174 // We can remove the files once the SQLite transaction has
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	175 // been successfully committed. Some files might have to be
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	176 // deleted because of recycling.
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	177 index_.listener_->CommitFilesToRemove();
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	178
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	179 index_.currentStorageSize_ += sizeOfAddedFiles;
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	180
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	181 assert(index_.currentStorageSize_ >= index_.listener_->GetSizeOfFilesToRemove());
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	182 index_.currentStorageSize_ -= index_.listener_->GetSizeOfFilesToRemove();
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	183
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	184 assert(index_.currentStorageSize_ == index_.db_->GetTotalCompressedSize());
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	185
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	186 isCommitted_ = true;
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	187 }
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	188 }
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	189 };
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	190
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	191
511 3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	192 struct ServerIndex::UnstableResourcePayload
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	193 {
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	194 Orthanc::ResourceType type_;
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	195 boost::posix_time::ptime time_;
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	196
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	197 UnstableResourcePayload() : type_(Orthanc::ResourceType_Instance)
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	198 {
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	199 }
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	200
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	201 UnstableResourcePayload(Orthanc::ResourceType type) : type_(type)
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	202 {
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	203 time_ = boost::posix_time::second_clock::local_time();
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	204 }
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	205
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	206 unsigned int GetAge() const
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	207 {
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	208 return (boost::posix_time::second_clock::local_time() - time_).total_seconds();
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	209 }
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	210 };
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	211
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	212
212 f276b175dcaf delete resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 206 diff changeset	213 bool ServerIndex::DeleteResource(Json::Value& target,
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	214 const std::string& uuid,
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	215 ResourceType expectedType)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	216 {
206 4453a010d0db flush to disk thread Sebastien Jodogne <s.jodogne@gmail.com> parents: 205 diff changeset	217 boost::mutex::scoped_lock lock(mutex_);
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	218 listener_->Reset();
201 bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	219
278 771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	220 Transaction t(*this);
201 bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	221
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	222 int64_t id;
1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	223 ResourceType type;
1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	224 if (!db_->LookupResource(uuid, id, type) \|\|
1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	225 expectedType != type)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	226 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	227 return false;
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	228 }
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	229
1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	230 db_->DeleteResource(id);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	231
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	232 if (listener_->HasRemainingLevel())
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	233 {
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	234 ResourceType type = listener_->GetRemainingType();
1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	235 const std::string& uuid = listener_->GetRemainingPublicId();
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	236
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	237 target["RemainingAncestor"] = Json::Value(Json::objectValue);
204 7f4acf490179 changes api Sebastien Jodogne <s.jodogne@gmail.com> parents: 202 diff changeset	238 target["RemainingAncestor"]["Path"] = GetBasePath(type, uuid);
434 ccf3a0a43dac EnumerationDictionary Sebastien Jodogne <s.jodogne@gmail.com> parents: 433 diff changeset	239 target["RemainingAncestor"]["Type"] = EnumerationToString(type);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	240 target["RemainingAncestor"]["ID"] = uuid;
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	241 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	242 else
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	243 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	244 target["RemainingAncestor"] = Json::nullValue;
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	245 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	246
278 771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	247 t.Commit(0);
264 5b8e8b74bc8b remove files only after the sqlite transaction has succeeded Sebastien Jodogne <s.jodogne@gmail.com> parents: 240 diff changeset	248
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	249 return true;
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	250 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	251
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	252
511 3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	253 void ServerIndex::FlushThread(ServerIndex* that)
206 4453a010d0db flush to disk thread Sebastien Jodogne <s.jodogne@gmail.com> parents: 205 diff changeset	254 {
511 3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	255 unsigned int sleep;
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	256
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	257 try
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	258 {
744 ec69658b031b fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 739 diff changeset	259 boost::mutex::scoped_lock lock(that->mutex_);
511 3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	260 std::string sleepString = that->db_->GetGlobalProperty(GlobalProperty_FlushSleep);
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	261 sleep = boost::lexical_cast<unsigned int>(sleepString);
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	262 }
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	263 catch (boost::bad_lexical_cast&)
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	264 {
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	265 // By default, wait for 10 seconds before flushing
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	266 sleep = 10;
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	267 }
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	268
206 4453a010d0db flush to disk thread Sebastien Jodogne <s.jodogne@gmail.com> parents: 205 diff changeset	269 LOG(INFO) << "Starting the database flushing thread (sleep = " << sleep << ")";
4453a010d0db flush to disk thread Sebastien Jodogne <s.jodogne@gmail.com> parents: 205 diff changeset	270
511 3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	271 unsigned int count = 0;
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	272
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	273 while (!that->done_)
206 4453a010d0db flush to disk thread Sebastien Jodogne <s.jodogne@gmail.com> parents: 205 diff changeset	274 {
511 3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	275 boost::this_thread::sleep(boost::posix_time::seconds(1));
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	276 count++;
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	277 if (count < sleep)
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	278 {
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	279 continue;
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	280 }
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	281
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	282 boost::mutex::scoped_lock lock(that->mutex_);
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	283 that->db_->FlushToDisk();
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	284 count = 0;
206 4453a010d0db flush to disk thread Sebastien Jodogne <s.jodogne@gmail.com> parents: 205 diff changeset	285 }
511 3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	286
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	287 LOG(INFO) << "Stopping the database flushing thread";
206 4453a010d0db flush to disk thread Sebastien Jodogne <s.jodogne@gmail.com> parents: 205 diff changeset	288 }
4453a010d0db flush to disk thread Sebastien Jodogne <s.jodogne@gmail.com> parents: 205 diff changeset	289
4453a010d0db flush to disk thread Sebastien Jodogne <s.jodogne@gmail.com> parents: 205 diff changeset	290
433 aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	291 static void ComputeExpectedNumberOfInstances(DatabaseWrapper& db,
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	292 int64_t series,
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	293 const DicomMap& dicomSummary)
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	294 {
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	295 try
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	296 {
656 08eca5d86aad fixes to cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 646 diff changeset	297 const DicomValue* value;
08eca5d86aad fixes to cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 646 diff changeset	298 const DicomValue* value2;
08eca5d86aad fixes to cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 646 diff changeset	299
433 aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	300 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_IMAGES_IN_ACQUISITION)) != NULL &&
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	301 (value2 = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_TEMPORAL_POSITIONS)) != NULL)
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	302 {
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	303 // Patch for series with temporal positions thanks to Will Ryder
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	304 int64_t imagesInAcquisition = boost::lexical_cast<int64_t>(value->AsString());
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	305 int64_t countTemporalPositions = boost::lexical_cast<int64_t>(value2->AsString());
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	306 std::string expected = boost::lexical_cast<std::string>(imagesInAcquisition * countTemporalPositions);
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	307 db.SetMetadata(series, MetadataType_Series_ExpectedNumberOfInstances, expected);
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	308 }
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	309
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	310 else if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_SLICES)) != NULL &&
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	311 (value2 = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_TIME_SLICES)) != NULL)
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	312 {
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	313 // Support of Cardio-PET images
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	314 int64_t numberOfSlices = boost::lexical_cast<int64_t>(value->AsString());
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	315 int64_t numberOfTimeSlices = boost::lexical_cast<int64_t>(value2->AsString());
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	316 std::string expected = boost::lexical_cast<std::string>(numberOfSlices * numberOfTimeSlices);
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	317 db.SetMetadata(series, MetadataType_Series_ExpectedNumberOfInstances, expected);
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	318 }
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	319
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	320 else if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES)) != NULL)
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	321 {
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	322 db.SetMetadata(series, MetadataType_Series_ExpectedNumberOfInstances, value->AsString());
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	323 }
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	324 }
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	325 catch (boost::bad_lexical_cast)
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	326 {
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	327 }
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	328 }
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	329
aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	330
226 8a26a8e85edf refactoring to read files Sebastien Jodogne <s.jodogne@gmail.com> parents: 224 diff changeset	331 ServerIndex::ServerIndex(ServerContext& context,
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	332 const std::string& dbPath) :
511 3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	333 done_(false),
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	334 maximumStorageSize_(0),
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	335 maximumPatients_(0)
186 f68c039b0571 preparing refactoring of ServerIndex Sebastien Jodogne <s.jodogne@gmail.com> parents: 180 diff changeset	336 {
226 8a26a8e85edf refactoring to read files Sebastien Jodogne <s.jodogne@gmail.com> parents: 224 diff changeset	337 listener_.reset(new Internals::ServerIndexListener(context));
186 f68c039b0571 preparing refactoring of ServerIndex Sebastien Jodogne <s.jodogne@gmail.com> parents: 180 diff changeset	338
201 bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	339 if (dbPath == ":memory:")
180 626777d01dc4 use of hashes to index dicom objects Sebastien Jodogne <s.jodogne@gmail.com> parents: 179 diff changeset	340 {
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	341 db_.reset(new DatabaseWrapper(*listener_));
180 626777d01dc4 use of hashes to index dicom objects Sebastien Jodogne <s.jodogne@gmail.com> parents: 179 diff changeset	342 }
626777d01dc4 use of hashes to index dicom objects Sebastien Jodogne <s.jodogne@gmail.com> parents: 179 diff changeset	343 else
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	344 {
201 bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	345 boost::filesystem::path p = dbPath;
180 626777d01dc4 use of hashes to index dicom objects Sebastien Jodogne <s.jodogne@gmail.com> parents: 179 diff changeset	346
626777d01dc4 use of hashes to index dicom objects Sebastien Jodogne <s.jodogne@gmail.com> parents: 179 diff changeset	347 try
626777d01dc4 use of hashes to index dicom objects Sebastien Jodogne <s.jodogne@gmail.com> parents: 179 diff changeset	348 {
201 bee20e978835 refactoring of delete Sebastien Jodogne <s.jodogne@gmail.com> parents: 200 diff changeset	349 boost::filesystem::create_directories(p);
180 626777d01dc4 use of hashes to index dicom objects Sebastien Jodogne <s.jodogne@gmail.com> parents: 179 diff changeset	350 }
626777d01dc4 use of hashes to index dicom objects Sebastien Jodogne <s.jodogne@gmail.com> parents: 179 diff changeset	351 catch (boost::filesystem::filesystem_error)
626777d01dc4 use of hashes to index dicom objects Sebastien Jodogne <s.jodogne@gmail.com> parents: 179 diff changeset	352 {
626777d01dc4 use of hashes to index dicom objects Sebastien Jodogne <s.jodogne@gmail.com> parents: 179 diff changeset	353 }
626777d01dc4 use of hashes to index dicom objects Sebastien Jodogne <s.jodogne@gmail.com> parents: 179 diff changeset	354
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	355 db_.reset(new DatabaseWrapper(p.string() + "/index", *listener_));
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	356 }
206 4453a010d0db flush to disk thread Sebastien Jodogne <s.jodogne@gmail.com> parents: 205 diff changeset	357
278 771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	358 currentStorageSize_ = db_->GetTotalCompressedSize();
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	359
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	360 // Initial recycling if the parameters have changed since the last
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	361 // execution of Orthanc
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	362 StandaloneRecycling();
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	363
511 3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	364 flushThread_ = boost::thread(FlushThread, this);
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	365 unstableResourcesMonitorThread_ = boost::thread(UnstableResourcesMonitorThread, this);
206 4453a010d0db flush to disk thread Sebastien Jodogne <s.jodogne@gmail.com> parents: 205 diff changeset	366 }
4453a010d0db flush to disk thread Sebastien Jodogne <s.jodogne@gmail.com> parents: 205 diff changeset	367
4453a010d0db flush to disk thread Sebastien Jodogne <s.jodogne@gmail.com> parents: 205 diff changeset	368
4453a010d0db flush to disk thread Sebastien Jodogne <s.jodogne@gmail.com> parents: 205 diff changeset	369 ServerIndex::~ServerIndex()
4453a010d0db flush to disk thread Sebastien Jodogne <s.jodogne@gmail.com> parents: 205 diff changeset	370 {
511 3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	371 done_ = true;
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	372
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	373 if (flushThread_.joinable())
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	374 {
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	375 flushThread_.join();
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	376 }
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	377
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	378 if (unstableResourcesMonitorThread_.joinable())
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	379 {
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	380 unstableResourcesMonitorThread_.join();
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	381 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	382 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	383
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	384
187 8e673a65564d refactoring of storing new instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 186 diff changeset	385 StoreStatus ServerIndex::Store(const DicomMap& dicomSummary,
232 5368bbe813cf refactoring of attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 231 diff changeset	386 const Attachments& attachments,
187 8e673a65564d refactoring of storing new instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 186 diff changeset	387 const std::string& remoteAet)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	388 {
206 4453a010d0db flush to disk thread Sebastien Jodogne <s.jodogne@gmail.com> parents: 205 diff changeset	389 boost::mutex::scoped_lock lock(mutex_);
268 4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	390 listener_->Reset();
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	391
178 5739b4d10a4b hashing Sebastien Jodogne <s.jodogne@gmail.com> parents: 147 diff changeset	392 DicomInstanceHasher hasher(dicomSummary);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	393
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	394 try
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	395 {
278 771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	396 Transaction t(*this);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	397
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	398 // Do nothing if the instance already exists
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	399 {
432 2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	400 ResourceType type;
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	401 int64_t tmp;
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	402 if (db_->LookupResource(hasher.HashInstance(), tmp, type))
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	403 {
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	404 assert(type == ResourceType_Instance);
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	405 return StoreStatus_AlreadyStored;
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	406 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	407 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	408
268 4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	409 // Ensure there is enough room in the storage for the new instance
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	410 uint64_t instanceSize = 0;
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	411 for (Attachments::const_iterator it = attachments.begin();
656 08eca5d86aad fixes to cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 646 diff changeset	412 it != attachments.end(); ++it)
268 4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	413 {
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	414 instanceSize += it->GetCompressedSize();
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	415 }
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	416
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	417 Recycle(instanceSize, hasher.HashPatient());
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	418
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	419 // Create the instance
432 2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	420 int64_t instance = db_->CreateResource(hasher.HashInstance(), ResourceType_Instance);
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	421
1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	422 DicomMap dicom;
1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	423 dicomSummary.ExtractInstanceInformation(dicom);
1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	424 db_->SetMainDicomTags(instance, dicom);
1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	425
432 2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	426 // Detect up to which level the patient/study/series/instance
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	427 // hierarchy must be created
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	428 int64_t patient = -1, study = -1, series = -1;
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	429 bool isNewPatient = false;
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	430 bool isNewStudy = false;
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	431 bool isNewSeries = false;
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	432
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	433 {
432 2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	434 ResourceType dummy;
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	435
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	436 if (db_->LookupResource(hasher.HashSeries(), series, dummy))
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	437 {
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	438 assert(dummy == ResourceType_Series);
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	439 // The patient, the study and the series already exist
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	440
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	441 bool ok = (db_->LookupResource(hasher.HashPatient(), patient, dummy) &&
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	442 db_->LookupResource(hasher.HashStudy(), study, dummy));
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	443 assert(ok);
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	444 }
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	445 else if (db_->LookupResource(hasher.HashStudy(), study, dummy))
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	446 {
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	447 assert(dummy == ResourceType_Study);
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	448
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	449 // New series: The patient and the study already exist
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	450 isNewSeries = true;
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	451
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	452 bool ok = db_->LookupResource(hasher.HashPatient(), patient, dummy);
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	453 assert(ok);
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	454 }
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	455 else if (db_->LookupResource(hasher.HashPatient(), patient, dummy))
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	456 {
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	457 assert(dummy == ResourceType_Patient);
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	458
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	459 // New study and series: The patient already exist
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	460 isNewStudy = true;
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	461 isNewSeries = true;
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	462 }
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	463 else
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	464 {
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	465 // New patient, study and series: Nothing exists
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	466 isNewPatient = true;
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	467 isNewStudy = true;
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	468 isNewSeries = true;
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	469 }
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	470 }
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	471
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	472 // Create the series if needed
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	473 if (isNewSeries)
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	474 {
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	475 series = db_->CreateResource(hasher.HashSeries(), ResourceType_Series);
1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	476 dicomSummary.ExtractSeriesInformation(dicom);
1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	477 db_->SetMainDicomTags(series, dicom);
432 2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	478 }
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	479
432 2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	480 // Create the study if needed
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	481 if (isNewStudy)
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	482 {
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	483 study = db_->CreateResource(hasher.HashStudy(), ResourceType_Study);
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	484 dicomSummary.ExtractStudyInformation(dicom);
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	485 db_->SetMainDicomTags(study, dicom);
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	486 }
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	487
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	488 // Create the patient if needed
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	489 if (isNewPatient)
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	490 {
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	491 patient = db_->CreateResource(hasher.HashPatient(), ResourceType_Patient);
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	492 dicomSummary.ExtractPatientInformation(dicom);
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	493 db_->SetMainDicomTags(patient, dicom);
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	494 }
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	495
432 2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	496 // Create the parent-to-child links
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	497 db_->AttachChild(series, instance);
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	498
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	499 if (isNewSeries)
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	500 {
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	501 db_->AttachChild(study, series);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	502 }
432 2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	503
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	504 if (isNewStudy)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	505 {
432 2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	506 db_->AttachChild(patient, study);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	507 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	508
432 2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	509 // Sanity checks
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	510 assert(patient != -1);
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	511 assert(study != -1);
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	512 assert(series != -1);
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	513 assert(instance != -1);
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	514
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	515 // Attach the files to the newly created instance
232 5368bbe813cf refactoring of attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 231 diff changeset	516 for (Attachments::const_iterator it = attachments.begin();
656 08eca5d86aad fixes to cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 646 diff changeset	517 it != attachments.end(); ++it)
232 5368bbe813cf refactoring of attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 231 diff changeset	518 {
5368bbe813cf refactoring of attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 231 diff changeset	519 db_->AddAttachment(instance, *it);
5368bbe813cf refactoring of attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 231 diff changeset	520 }
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	521
1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	522 // Attach the metadata
432 2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	523 std::string now = Toolbox::GetNowIsoString();
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	524 db_->SetMetadata(instance, MetadataType_Instance_ReceptionDate, now);
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	525 db_->SetMetadata(series, MetadataType_LastUpdate, now);
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	526 db_->SetMetadata(study, MetadataType_LastUpdate, now);
2b09d4ee86c6 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 431 diff changeset	527 db_->SetMetadata(patient, MetadataType_LastUpdate, now);
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	528 db_->SetMetadata(instance, MetadataType_Instance_RemoteAet, remoteAet);
1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	529
1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	530 const DicomValue* value;
1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	531 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_INSTANCE_NUMBER)) != NULL \|\|
1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	532 (value = dicomSummary.TestAndGetValue(DICOM_TAG_IMAGE_INDEX)) != NULL)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	533 {
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	534 db_->SetMetadata(instance, MetadataType_Instance_IndexInSeries, value->AsString());
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	535 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	536
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	537 if (isNewSeries)
1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	538 {
433 aa50783f9550 cardiopet Sebastien Jodogne <s.jodogne@gmail.com> parents: 432 diff changeset	539 ComputeExpectedNumberOfInstances(*db_, series, dicomSummary);
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	540 }
1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	541
205 6ab754744446 logging of completed series Sebastien Jodogne <s.jodogne@gmail.com> parents: 204 diff changeset	542 // Check whether the series of this new instance is now completed
6ab754744446 logging of completed series Sebastien Jodogne <s.jodogne@gmail.com> parents: 204 diff changeset	543 SeriesStatus seriesStatus = GetSeriesStatus(series);
6ab754744446 logging of completed series Sebastien Jodogne <s.jodogne@gmail.com> parents: 204 diff changeset	544 if (seriesStatus == SeriesStatus_Complete)
6ab754744446 logging of completed series Sebastien Jodogne <s.jodogne@gmail.com> parents: 204 diff changeset	545 {
6ab754744446 logging of completed series Sebastien Jodogne <s.jodogne@gmail.com> parents: 204 diff changeset	546 db_->LogChange(ChangeType_CompletedSeries, series, ResourceType_Series);
6ab754744446 logging of completed series Sebastien Jodogne <s.jodogne@gmail.com> parents: 204 diff changeset	547 }
6ab754744446 logging of completed series Sebastien Jodogne <s.jodogne@gmail.com> parents: 204 diff changeset	548
511 3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	549 // Mark the parent resources of this instance as unstable
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	550 MarkAsUnstable(patient, ResourceType_Patient);
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	551 MarkAsUnstable(study, ResourceType_Study);
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	552 MarkAsUnstable(series, ResourceType_Series);
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	553
278 771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	554 t.Commit(instanceSize);
268 4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	555
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	556 return StoreStatus_Success;
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	557 }
62 a70bb32802ae renaming Server Sebastien Jodogne <s.jodogne@gmail.com> parents: 57 diff changeset	558 catch (OrthancException& e)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	559 {
268 4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	560 LOG(ERROR) << "EXCEPTION [" << e.What() << "]"
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	561 << " (SQLite status: " << db_->GetErrorMessage() << ")";
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	562 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	563
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	564 return StoreStatus_Failure;
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	565 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	566
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	567
238 e4148b0ab1d0 statistics URI Sebastien Jodogne <s.jodogne@gmail.com> parents: 237 diff changeset	568 void ServerIndex::ComputeStatistics(Json::Value& target)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	569 {
206 4453a010d0db flush to disk thread Sebastien Jodogne <s.jodogne@gmail.com> parents: 205 diff changeset	570 boost::mutex::scoped_lock lock(mutex_);
238 e4148b0ab1d0 statistics URI Sebastien Jodogne <s.jodogne@gmail.com> parents: 237 diff changeset	571 target = Json::objectValue;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	572
278 771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	573 uint64_t cs = currentStorageSize_;
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	574 assert(cs == db_->GetTotalCompressedSize());
238 e4148b0ab1d0 statistics URI Sebastien Jodogne <s.jodogne@gmail.com> parents: 237 diff changeset	575 uint64_t us = db_->GetTotalUncompressedSize();
440 23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	576 target["TotalDiskSize"] = boost::lexical_cast<std::string>(cs);
238 e4148b0ab1d0 statistics URI Sebastien Jodogne <s.jodogne@gmail.com> parents: 237 diff changeset	577 target["TotalUncompressedSize"] = boost::lexical_cast<std::string>(us);
440 23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	578 target["TotalDiskSizeMB"] = boost::lexical_cast<unsigned int>(cs / MEGA_BYTES);
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	579 target["TotalUncompressedSizeMB"] = boost::lexical_cast<unsigned int>(us / MEGA_BYTES);
238 e4148b0ab1d0 statistics URI Sebastien Jodogne <s.jodogne@gmail.com> parents: 237 diff changeset	580
e4148b0ab1d0 statistics URI Sebastien Jodogne <s.jodogne@gmail.com> parents: 237 diff changeset	581 target["CountPatients"] = static_cast<unsigned int>(db_->GetResourceCount(ResourceType_Patient));
e4148b0ab1d0 statistics URI Sebastien Jodogne <s.jodogne@gmail.com> parents: 237 diff changeset	582 target["CountStudies"] = static_cast<unsigned int>(db_->GetResourceCount(ResourceType_Study));
e4148b0ab1d0 statistics URI Sebastien Jodogne <s.jodogne@gmail.com> parents: 237 diff changeset	583 target["CountSeries"] = static_cast<unsigned int>(db_->GetResourceCount(ResourceType_Series));
e4148b0ab1d0 statistics URI Sebastien Jodogne <s.jodogne@gmail.com> parents: 237 diff changeset	584 target["CountInstances"] = static_cast<unsigned int>(db_->GetResourceCount(ResourceType_Instance));
e4148b0ab1d0 statistics URI Sebastien Jodogne <s.jodogne@gmail.com> parents: 237 diff changeset	585 }
e4148b0ab1d0 statistics URI Sebastien Jodogne <s.jodogne@gmail.com> parents: 237 diff changeset	586
187 8e673a65564d refactoring of storing new instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 186 diff changeset	587
8e673a65564d refactoring of storing new instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 186 diff changeset	588
585 b2357f1f026f fix types jodogne parents: 521 diff changeset	589 SeriesStatus ServerIndex::GetSeriesStatus(int64_t id)
199 dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	590 {
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	591 // Get the expected number of instances in this series (from the metadata)
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	592 std::string s = db_->GetMetadata(id, MetadataType_Series_ExpectedNumberOfInstances);
199 dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	593
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	594 size_t expected;
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	595 try
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	596 {
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	597 expected = boost::lexical_cast<size_t>(s);
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	598 }
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	599 catch (boost::bad_lexical_cast&)
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	600 {
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	601 return SeriesStatus_Unknown;
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	602 }
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	603
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	604 // Loop over the instances of this series
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	605 std::list<int64_t> children;
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	606 db_->GetChildrenInternalId(children, id);
199 dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	607
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	608 std::set<size_t> instances;
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	609 for (std::list<int64_t>::const_iterator
656 08eca5d86aad fixes to cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 646 diff changeset	610 it = children.begin(); it != children.end(); ++it)
199 dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	611 {
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	612 // Get the index of this instance in the series
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	613 s = db_->GetMetadata(*it, MetadataType_Instance_IndexInSeries);
199 dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	614 size_t index;
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	615 try
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	616 {
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	617 index = boost::lexical_cast<size_t>(s);
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	618 }
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	619 catch (boost::bad_lexical_cast&)
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	620 {
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	621 return SeriesStatus_Unknown;
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	622 }
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	623
656 08eca5d86aad fixes to cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 646 diff changeset	624 if (!(index > 0 && index <= expected))
199 dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	625 {
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	626 // Out-of-range instance index
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	627 return SeriesStatus_Inconsistent;
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	628 }
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	629
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	630 if (instances.find(index) != instances.end())
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	631 {
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	632 // Twice the same instance index
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	633 return SeriesStatus_Inconsistent;
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	634 }
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	635
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	636 instances.insert(index);
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	637 }
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	638
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	639 if (instances.size() == expected)
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	640 {
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	641 return SeriesStatus_Complete;
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	642 }
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	643 else
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	644 {
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	645 return SeriesStatus_Missing;
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	646 }
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	647 }
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	648
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	649
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	650
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	651 void ServerIndex::MainDicomTagsToJson(Json::Value& target,
1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	652 int64_t resourceId)
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	653 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	654 DicomMap tags;
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	655 db_->GetMainDicomTags(tags, resourceId);
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	656 target["MainDicomTags"] = Json::objectValue;
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	657 FromDcmtkBridge::ToJson(target["MainDicomTags"], tags);
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	658 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	659
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	660 bool ServerIndex::LookupResource(Json::Value& result,
199 dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	661 const std::string& publicId,
dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	662 ResourceType expectedType)
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	663 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	664 result = Json::objectValue;
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	665
206 4453a010d0db flush to disk thread Sebastien Jodogne <s.jodogne@gmail.com> parents: 205 diff changeset	666 boost::mutex::scoped_lock lock(mutex_);
199 dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	667
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	668 // Lookup for the requested resource
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	669 int64_t id;
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	670 ResourceType type;
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	671 if (!db_->LookupResource(publicId, id, type) \|\|
199 dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	672 type != expectedType)
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	673 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	674 return false;
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	675 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	676
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	677 // Find the parent resource (if it exists)
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	678 if (type != ResourceType_Patient)
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	679 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	680 int64_t parentId;
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	681 if (!db_->LookupParent(parentId, id))
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	682 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	683 throw OrthancException(ErrorCode_InternalError);
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	684 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	685
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	686 std::string parent = db_->GetPublicId(parentId);
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	687
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	688 switch (type)
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	689 {
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	690 case ResourceType_Study:
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	691 result["ParentPatient"] = parent;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	692 break;
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	693
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	694 case ResourceType_Series:
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	695 result["ParentStudy"] = parent;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	696 break;
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	697
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	698 case ResourceType_Instance:
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	699 result["ParentSeries"] = parent;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	700 break;
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	701
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	702 default:
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	703 throw OrthancException(ErrorCode_InternalError);
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	704 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	705 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	706
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	707 // List the children resources
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	708 std::list<std::string> children;
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	709 db_->GetChildrenPublicId(children, id);
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	710
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	711 if (type != ResourceType_Instance)
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	712 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	713 Json::Value c = Json::arrayValue;
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	714
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	715 for (std::list<std::string>::const_iterator
656 08eca5d86aad fixes to cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 646 diff changeset	716 it = children.begin(); it != children.end(); ++it)
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	717 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	718 c.append(*it);
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	719 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	720
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	721 switch (type)
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	722 {
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	723 case ResourceType_Patient:
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	724 result["Studies"] = c;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	725 break;
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	726
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	727 case ResourceType_Study:
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	728 result["Series"] = c;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	729 break;
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	730
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	731 case ResourceType_Series:
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	732 result["Instances"] = c;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	733 break;
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	734
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	735 default:
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	736 throw OrthancException(ErrorCode_InternalError);
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	737 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	738 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	739
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	740 // Set the resource type
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	741 switch (type)
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	742 {
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	743 case ResourceType_Patient:
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	744 result["Type"] = "Patient";
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	745 break;
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	746
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	747 case ResourceType_Study:
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	748 result["Type"] = "Study";
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	749 break;
199 dfa2899d9960 refactoring cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 198 diff changeset	750
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	751 case ResourceType_Series:
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	752 {
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	753 result["Type"] = "Series";
434 ccf3a0a43dac EnumerationDictionary Sebastien Jodogne <s.jodogne@gmail.com> parents: 433 diff changeset	754 result["Status"] = EnumerationToString(GetSeriesStatus(id));
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	755
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	756 int i;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	757 if (db_->GetMetadataAsInteger(i, id, MetadataType_Series_ExpectedNumberOfInstances))
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	758 result["ExpectedNumberOfInstances"] = i;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	759 else
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	760 result["ExpectedNumberOfInstances"] = Json::nullValue;
200 9c58b2b03cf0 refactoring of read operations Sebastien Jodogne <s.jodogne@gmail.com> parents: 199 diff changeset	761
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	762 break;
200 9c58b2b03cf0 refactoring of read operations Sebastien Jodogne <s.jodogne@gmail.com> parents: 199 diff changeset	763 }
9c58b2b03cf0 refactoring of read operations Sebastien Jodogne <s.jodogne@gmail.com> parents: 199 diff changeset	764
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	765 case ResourceType_Instance:
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	766 {
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	767 result["Type"] = "Instance";
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	768
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	769 FileInfo attachment;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	770 if (!db_->LookupAttachment(attachment, id, FileContentType_Dicom))
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	771 {
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	772 throw OrthancException(ErrorCode_InternalError);
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	773 }
200 9c58b2b03cf0 refactoring of read operations Sebastien Jodogne <s.jodogne@gmail.com> parents: 199 diff changeset	774
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	775 result["FileSize"] = static_cast<unsigned int>(attachment.GetUncompressedSize());
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	776 result["FileUuid"] = attachment.GetUuid();
200 9c58b2b03cf0 refactoring of read operations Sebastien Jodogne <s.jodogne@gmail.com> parents: 199 diff changeset	777
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	778 int i;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	779 if (db_->GetMetadataAsInteger(i, id, MetadataType_Instance_IndexInSeries))
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	780 result["IndexInSeries"] = i;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	781 else
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	782 result["IndexInSeries"] = Json::nullValue;
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	783
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	784 break;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	785 }
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	786
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	787 default:
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	788 throw OrthancException(ErrorCode_InternalError);
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	789 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	790
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	791 // Record the remaining information
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	792 result["ID"] = publicId;
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	793 MainDicomTagsToJson(result, id);
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	794
315 fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	795 std::string tmp;
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	796
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	797 tmp = db_->GetMetadata(id, MetadataType_AnonymizedFrom);
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	798 if (tmp.size() != 0)
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	799 result["AnonymizedFrom"] = tmp;
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	800
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	801 tmp = db_->GetMetadata(id, MetadataType_ModifiedFrom);
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	802 if (tmp.size() != 0)
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	803 result["ModifiedFrom"] = tmp;
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	804
511 3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	805 if (type == ResourceType_Patient \|\|
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	806 type == ResourceType_Study \|\|
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	807 type == ResourceType_Series)
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	808 {
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	809 result["IsStable"] = !unstableResources_.Contains(id);
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	810 }
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	811
198 663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	812 return true;
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	813 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX Sebastien Jodogne <s.jodogne@gmail.com> parents: 197 diff changeset	814
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	815
232 5368bbe813cf refactoring of attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 231 diff changeset	816 bool ServerIndex::LookupAttachment(FileInfo& attachment,
5368bbe813cf refactoring of attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 231 diff changeset	817 const std::string& instanceUuid,
233 c11273198cef rename Sebastien Jodogne <s.jodogne@gmail.com> parents: 232 diff changeset	818 FileContentType contentType)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	819 {
206 4453a010d0db flush to disk thread Sebastien Jodogne <s.jodogne@gmail.com> parents: 205 diff changeset	820 boost::mutex::scoped_lock lock(mutex_);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	821
193 a1b9d1e1497b failed attempt to compile with linux standard base Sebastien Jodogne <s.jodogne@gmail.com> parents: 192 diff changeset	822 int64_t id;
a1b9d1e1497b failed attempt to compile with linux standard base Sebastien Jodogne <s.jodogne@gmail.com> parents: 192 diff changeset	823 ResourceType type;
701 f9052558eada fix attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 699 diff changeset	824 if (!db_->LookupResource(instanceUuid, id, type))
192 c56dc32266e0 refactoring getfile Sebastien Jodogne <s.jodogne@gmail.com> parents: 191 diff changeset	825 {
c56dc32266e0 refactoring getfile Sebastien Jodogne <s.jodogne@gmail.com> parents: 191 diff changeset	826 throw OrthancException(ErrorCode_InternalError);
c56dc32266e0 refactoring getfile Sebastien Jodogne <s.jodogne@gmail.com> parents: 191 diff changeset	827 }
193 a1b9d1e1497b failed attempt to compile with linux standard base Sebastien Jodogne <s.jodogne@gmail.com> parents: 192 diff changeset	828
232 5368bbe813cf refactoring of attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 231 diff changeset	829 if (db_->LookupAttachment(attachment, id, contentType))
5368bbe813cf refactoring of attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 231 diff changeset	830 {
233 c11273198cef rename Sebastien Jodogne <s.jodogne@gmail.com> parents: 232 diff changeset	831 assert(attachment.GetContentType() == contentType);
232 5368bbe813cf refactoring of attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 231 diff changeset	832 return true;
5368bbe813cf refactoring of attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 231 diff changeset	833 }
5368bbe813cf refactoring of attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 231 diff changeset	834 else
5368bbe813cf refactoring of attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 231 diff changeset	835 {
5368bbe813cf refactoring of attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 231 diff changeset	836 return false;
5368bbe813cf refactoring of attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 231 diff changeset	837 }
192 c56dc32266e0 refactoring getfile Sebastien Jodogne <s.jodogne@gmail.com> parents: 191 diff changeset	838 }
c56dc32266e0 refactoring getfile Sebastien Jodogne <s.jodogne@gmail.com> parents: 191 diff changeset	839
c56dc32266e0 refactoring getfile Sebastien Jodogne <s.jodogne@gmail.com> parents: 191 diff changeset	840
c56dc32266e0 refactoring getfile Sebastien Jodogne <s.jodogne@gmail.com> parents: 191 diff changeset	841
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	842 void ServerIndex::GetAllUuids(Json::Value& target,
190 b6cef9d45cc3 getallpublicids Sebastien Jodogne <s.jodogne@gmail.com> parents: 189 diff changeset	843 ResourceType resourceType)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	844 {
206 4453a010d0db flush to disk thread Sebastien Jodogne <s.jodogne@gmail.com> parents: 205 diff changeset	845 boost::mutex::scoped_lock lock(mutex_);
202 1650557bd81a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 201 diff changeset	846 db_->GetAllPublicIds(target, resourceType);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	847 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	848
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	849
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	850 bool ServerIndex::GetChanges(Json::Value& target,
204 7f4acf490179 changes api Sebastien Jodogne <s.jodogne@gmail.com> parents: 202 diff changeset	851 int64_t since,
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	852 unsigned int maxResults)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	853 {
206 4453a010d0db flush to disk thread Sebastien Jodogne <s.jodogne@gmail.com> parents: 205 diff changeset	854 boost::mutex::scoped_lock lock(mutex_);
237 16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	855 db_->GetChanges(target, since, maxResults);
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	856 return true;
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	857 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	858
237 16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	859 bool ServerIndex::GetLastChange(Json::Value& target)
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	860 {
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	861 boost::mutex::scoped_lock lock(mutex_);
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	862 db_->GetLastChange(target);
204 7f4acf490179 changes api Sebastien Jodogne <s.jodogne@gmail.com> parents: 202 diff changeset	863 return true;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	864 }
231 8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	865
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	866 void ServerIndex::LogExportedResource(const std::string& publicId,
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	867 const std::string& remoteModality)
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	868 {
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	869 boost::mutex::scoped_lock lock(mutex_);
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	870
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	871 int64_t id;
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	872 ResourceType type;
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	873 if (!db_->LookupResource(publicId, id, type))
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	874 {
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	875 throw OrthancException(ErrorCode_InternalError);
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	876 }
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	877
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	878 std::string patientId;
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	879 std::string studyInstanceUid;
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	880 std::string seriesInstanceUid;
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	881 std::string sopInstanceUid;
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	882
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	883 int64_t currentId = id;
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	884 ResourceType currentType = type;
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	885
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	886 // Iteratively go up inside the patient/study/series/instance hierarchy
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	887 bool done = false;
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	888 while (!done)
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	889 {
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	890 DicomMap map;
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	891 db_->GetMainDicomTags(map, currentId);
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	892
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	893 switch (currentType)
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	894 {
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	895 case ResourceType_Patient:
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	896 patientId = map.GetValue(DICOM_TAG_PATIENT_ID).AsString();
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	897 done = true;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	898 break;
231 8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	899
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	900 case ResourceType_Study:
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	901 studyInstanceUid = map.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).AsString();
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	902 currentType = ResourceType_Patient;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	903 break;
231 8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	904
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	905 case ResourceType_Series:
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	906 seriesInstanceUid = map.GetValue(DICOM_TAG_SERIES_INSTANCE_UID).AsString();
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	907 currentType = ResourceType_Study;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	908 break;
231 8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	909
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	910 case ResourceType_Instance:
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	911 sopInstanceUid = map.GetValue(DICOM_TAG_SOP_INSTANCE_UID).AsString();
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	912 currentType = ResourceType_Series;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	913 break;
231 8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	914
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	915 default:
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	916 throw OrthancException(ErrorCode_InternalError);
231 8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	917 }
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	918
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	919 // If we have not reached the Patient level, find the parent of
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	920 // the current resource
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	921 if (!done)
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	922 {
375 d1ea72f1c967 major fix of storescu Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	923 bool ok = db_->LookupParent(currentId, currentId);
d1ea72f1c967 major fix of storescu Sebastien Jodogne <s.jodogne@gmail.com> parents: 315 diff changeset	924 assert(ok);
231 8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	925 }
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	926 }
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	927
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	928 // No need for a SQLite::Transaction here, as we only insert 1 record
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	929 db_->LogExportedResource(type,
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	930 publicId,
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	931 remoteModality,
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	932 patientId,
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	933 studyInstanceUid,
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	934 seriesInstanceUid,
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	935 sopInstanceUid);
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	936 }
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	937
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	938
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	939 bool ServerIndex::GetExportedResources(Json::Value& target,
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	940 int64_t since,
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	941 unsigned int maxResults)
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	942 {
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	943 boost::mutex::scoped_lock lock(mutex_);
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	944 db_->GetExportedResources(target, since, maxResults);
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	945 return true;
8098448bd827 export log Sebastien Jodogne <s.jodogne@gmail.com> parents: 226 diff changeset	946 }
237 16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	947
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	948 bool ServerIndex::GetLastExportedResource(Json::Value& target)
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	949 {
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	950 boost::mutex::scoped_lock lock(mutex_);
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	951 db_->GetLastExportedResource(target);
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	952 return true;
16a4ac70bd8a last change and export Sebastien Jodogne <s.jodogne@gmail.com> parents: 233 diff changeset	953 }
268 4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	954
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	955
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	956 bool ServerIndex::IsRecyclingNeeded(uint64_t instanceSize)
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	957 {
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	958 if (maximumStorageSize_ != 0)
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	959 {
278 771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	960 uint64_t currentSize = currentStorageSize_ - listener_->GetSizeOfFilesToRemove();
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	961 assert(db_->GetTotalCompressedSize() == currentSize);
771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	962
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	963 if (currentSize + instanceSize > maximumStorageSize_)
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	964 {
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	965 return true;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	966 }
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	967 }
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	968
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	969 if (maximumPatients_ != 0)
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	970 {
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	971 uint64_t patientCount = db_->GetResourceCount(ResourceType_Patient);
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	972 if (patientCount > maximumPatients_)
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	973 {
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	974 return true;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	975 }
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	976 }
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	977
268 4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	978 return false;
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	979 }
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	980
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	981
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	982 void ServerIndex::Recycle(uint64_t instanceSize,
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	983 const std::string& newPatientId)
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	984 {
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	985 if (!IsRecyclingNeeded(instanceSize))
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	986 {
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	987 return;
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	988 }
4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	989
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	990 // Check whether other DICOM instances from this patient are
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	991 // already stored
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	992 int64_t patientToAvoid;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	993 ResourceType type;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	994 bool hasPatientToAvoid = db_->LookupResource(newPatientId, patientToAvoid, type);
268 4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	995
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	996 if (hasPatientToAvoid && type != ResourceType_Patient)
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	997 {
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	998 throw OrthancException(ErrorCode_InternalError);
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	999 }
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1000
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1001 // Iteratively select patient to remove until there is enough
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1002 // space in the DICOM store
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1003 int64_t patientToRecycle;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1004 while (true)
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1005 {
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1006 // If other instances of this patient are already in the store,
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1007 // we must avoid to recycle them
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1008 bool ok = hasPatientToAvoid ?
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1009 db_->SelectPatientToRecycle(patientToRecycle, patientToAvoid) :
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1010 db_->SelectPatientToRecycle(patientToRecycle);
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1011
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1012 if (!ok)
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1013 {
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1014 throw OrthancException(ErrorCode_FullStorage);
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1015 }
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1016
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1017 LOG(INFO) << "Recycling one patient";
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1018 db_->DeleteResource(patientToRecycle);
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1019
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1020 if (!IsRecyclingNeeded(instanceSize))
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1021 {
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1022 // OK, we're done
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1023 break;
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1024 }
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1025 }
268 4bc02e2254ec preparing ServerIndex for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 264 diff changeset	1026 }
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1027
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1028 void ServerIndex::SetMaximumPatientCount(unsigned int count)
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1029 {
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1030 boost::mutex::scoped_lock lock(mutex_);
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1031 maximumPatients_ = count;
270 e6a4c4329481 parameters for storage capacity Sebastien Jodogne <s.jodogne@gmail.com> parents: 269 diff changeset	1032
e6a4c4329481 parameters for storage capacity Sebastien Jodogne <s.jodogne@gmail.com> parents: 269 diff changeset	1033 if (count == 0)
e6a4c4329481 parameters for storage capacity Sebastien Jodogne <s.jodogne@gmail.com> parents: 269 diff changeset	1034 {
e6a4c4329481 parameters for storage capacity Sebastien Jodogne <s.jodogne@gmail.com> parents: 269 diff changeset	1035 LOG(WARNING) << "No limit on the number of stored patients";
e6a4c4329481 parameters for storage capacity Sebastien Jodogne <s.jodogne@gmail.com> parents: 269 diff changeset	1036 }
e6a4c4329481 parameters for storage capacity Sebastien Jodogne <s.jodogne@gmail.com> parents: 269 diff changeset	1037 else
e6a4c4329481 parameters for storage capacity Sebastien Jodogne <s.jodogne@gmail.com> parents: 269 diff changeset	1038 {
e6a4c4329481 parameters for storage capacity Sebastien Jodogne <s.jodogne@gmail.com> parents: 269 diff changeset	1039 LOG(WARNING) << "At most " << count << " patients will be stored";
e6a4c4329481 parameters for storage capacity Sebastien Jodogne <s.jodogne@gmail.com> parents: 269 diff changeset	1040 }
e6a4c4329481 parameters for storage capacity Sebastien Jodogne <s.jodogne@gmail.com> parents: 269 diff changeset	1041
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1042 StandaloneRecycling();
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1043 }
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1044
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1045 void ServerIndex::SetMaximumStorageSize(uint64_t size)
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1046 {
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1047 boost::mutex::scoped_lock lock(mutex_);
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1048 maximumStorageSize_ = size;
270 e6a4c4329481 parameters for storage capacity Sebastien Jodogne <s.jodogne@gmail.com> parents: 269 diff changeset	1049
e6a4c4329481 parameters for storage capacity Sebastien Jodogne <s.jodogne@gmail.com> parents: 269 diff changeset	1050 if (size == 0)
e6a4c4329481 parameters for storage capacity Sebastien Jodogne <s.jodogne@gmail.com> parents: 269 diff changeset	1051 {
e6a4c4329481 parameters for storage capacity Sebastien Jodogne <s.jodogne@gmail.com> parents: 269 diff changeset	1052 LOG(WARNING) << "No limit on the size of the storage area";
e6a4c4329481 parameters for storage capacity Sebastien Jodogne <s.jodogne@gmail.com> parents: 269 diff changeset	1053 }
e6a4c4329481 parameters for storage capacity Sebastien Jodogne <s.jodogne@gmail.com> parents: 269 diff changeset	1054 else
e6a4c4329481 parameters for storage capacity Sebastien Jodogne <s.jodogne@gmail.com> parents: 269 diff changeset	1055 {
440 23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1056 LOG(WARNING) << "At most " << (size / MEGA_BYTES) << "MB will be used for the storage area";
270 e6a4c4329481 parameters for storage capacity Sebastien Jodogne <s.jodogne@gmail.com> parents: 269 diff changeset	1057 }
e6a4c4329481 parameters for storage capacity Sebastien Jodogne <s.jodogne@gmail.com> parents: 269 diff changeset	1058
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1059 StandaloneRecycling();
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1060 }
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1061
272 337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1062 void ServerIndex::StandaloneRecycling()
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1063 {
f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1064 // WARNING: No mutex here, do not include this as a public method
278 771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	1065 Transaction t(*this);
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1066 Recycle(0, "");
278 771f12042be9 more efficient determination of storage size for recycling Sebastien Jodogne <s.jodogne@gmail.com> parents: 273 diff changeset	1067 t.Commit(0);
269 f6fdf5abe751 recycling up and running Sebastien Jodogne <s.jodogne@gmail.com> parents: 268 diff changeset	1068 }
272 337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1069
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1070
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1071 bool ServerIndex::IsProtectedPatient(const std::string& publicId)
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1072 {
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1073 boost::mutex::scoped_lock lock(mutex_);
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1074
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1075 // Lookup for the requested resource
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1076 int64_t id;
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1077 ResourceType type;
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1078 if (!db_->LookupResource(publicId, id, type) \|\|
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1079 type != ResourceType_Patient)
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1080 {
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1081 throw OrthancException(ErrorCode_ParameterOutOfRange);
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1082 }
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1083
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1084 return db_->IsProtectedPatient(id);
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1085 }
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1086
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1087
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1088 void ServerIndex::SetProtectedPatient(const std::string& publicId,
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1089 bool isProtected)
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1090 {
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1091 boost::mutex::scoped_lock lock(mutex_);
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1092
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1093 // Lookup for the requested resource
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1094 int64_t id;
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1095 ResourceType type;
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1096 if (!db_->LookupResource(publicId, id, type) \|\|
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1097 type != ResourceType_Patient)
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1098 {
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1099 throw OrthancException(ErrorCode_ParameterOutOfRange);
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1100 }
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1101
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1102 // No need for a SQLite::Transaction here, as we only make 1 write to the DB
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1103 db_->SetProtectedPatient(id, isProtected);
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1104
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1105 if (isProtected)
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1106 LOG(INFO) << "Patient " << publicId << " has been protected";
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1107 else
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1108 LOG(INFO) << "Patient " << publicId << " has been unprotected";
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1109 }
337c506461d2 protection from rest api Sebastien Jodogne <s.jodogne@gmail.com> parents: 270 diff changeset	1110
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1111
714 6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1112 void ServerIndex::GetChildren(std::list<std::string>& result,
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1113 const std::string& publicId)
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1114 {
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1115 result.clear();
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1116
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1117 boost::mutex::scoped_lock lock(mutex_);
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1118
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1119 ResourceType type;
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1120 int64_t resource;
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1121 if (!db_->LookupResource(publicId, resource, type))
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1122 {
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1123 throw OrthancException(ErrorCode_UnknownResource);
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1124 }
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1125
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1126 if (type == ResourceType_Instance)
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1127 {
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1128 // An instance cannot have a child
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1129 throw OrthancException(ErrorCode_BadParameterType);
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1130 }
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1131
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1132 std::list<int64_t> tmp;
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1133 db_->GetChildrenInternalId(tmp, resource);
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1134
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1135 for (std::list<int64_t>::const_iterator
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1136 it = tmp.begin(); it != tmp.end(); ++it)
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1137 {
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1138 result.push_back(db_->GetPublicId(*it));
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1139 }
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1140 }
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1141
6a1dbba0cca7 new implementation of C-Find handler Sebastien Jodogne <s.jodogne@gmail.com> parents: 704 diff changeset	1142
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1143 void ServerIndex::GetChildInstances(std::list<std::string>& result,
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1144 const std::string& publicId)
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1145 {
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1146 result.clear();
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1147
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1148 boost::mutex::scoped_lock lock(mutex_);
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1149
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1150 ResourceType type;
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1151 int64_t top;
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1152 if (!db_->LookupResource(publicId, top, type))
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1153 {
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1154 throw OrthancException(ErrorCode_UnknownResource);
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1155 }
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1156
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1157 if (type == ResourceType_Instance)
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1158 {
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1159 // The resource is already an instance: Do not go down the hierarchy
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1160 result.push_back(publicId);
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1161 return;
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1162 }
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1163
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1164 std::stack<int64_t> toExplore;
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1165 toExplore.push(top);
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1166
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1167 std::list<int64_t> tmp;
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1168
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1169 while (!toExplore.empty())
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1170 {
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1171 // Get the internal ID of the current resource
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1172 int64_t resource = toExplore.top();
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1173 toExplore.pop();
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1174
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1175 if (db_->GetResourceType(resource) == ResourceType_Instance)
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1176 {
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1177 result.push_back(db_->GetPublicId(resource));
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1178 }
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1179 else
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1180 {
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1181 // Tag all the children of this resource as to be explored
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1182 db_->GetChildrenInternalId(tmp, resource);
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1183 for (std::list<int64_t>::const_iterator
656 08eca5d86aad fixes to cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 646 diff changeset	1184 it = tmp.begin(); it != tmp.end(); ++it)
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1185 {
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1186 toExplore.push(*it);
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1187 }
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1188 }
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1189 }
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1190 }
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 278 diff changeset	1191
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1192
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1193 void ServerIndex::SetMetadata(const std::string& publicId,
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1194 MetadataType type,
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1195 const std::string& value)
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1196 {
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1197 boost::mutex::scoped_lock lock(mutex_);
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1198
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1199 ResourceType rtype;
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1200 int64_t id;
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1201 if (!db_->LookupResource(publicId, id, rtype))
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1202 {
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1203 throw OrthancException(ErrorCode_UnknownResource);
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1204 }
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1205
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1206 db_->SetMetadata(id, type, value);
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1207 }
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1208
438 7bbe77cb9e12 DELETE metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 436 diff changeset	1209
7bbe77cb9e12 DELETE metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 436 diff changeset	1210 void ServerIndex::DeleteMetadata(const std::string& publicId,
7bbe77cb9e12 DELETE metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 436 diff changeset	1211 MetadataType type)
7bbe77cb9e12 DELETE metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 436 diff changeset	1212 {
7bbe77cb9e12 DELETE metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 436 diff changeset	1213 boost::mutex::scoped_lock lock(mutex_);
7bbe77cb9e12 DELETE metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 436 diff changeset	1214
7bbe77cb9e12 DELETE metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 436 diff changeset	1215 ResourceType rtype;
7bbe77cb9e12 DELETE metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 436 diff changeset	1216 int64_t id;
7bbe77cb9e12 DELETE metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 436 diff changeset	1217 if (!db_->LookupResource(publicId, id, rtype))
7bbe77cb9e12 DELETE metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 436 diff changeset	1218 {
7bbe77cb9e12 DELETE metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 436 diff changeset	1219 throw OrthancException(ErrorCode_UnknownResource);
7bbe77cb9e12 DELETE metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 436 diff changeset	1220 }
7bbe77cb9e12 DELETE metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 436 diff changeset	1221
7bbe77cb9e12 DELETE metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 436 diff changeset	1222 db_->DeleteMetadata(id, type);
7bbe77cb9e12 DELETE metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 436 diff changeset	1223 }
7bbe77cb9e12 DELETE metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 436 diff changeset	1224
7bbe77cb9e12 DELETE metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 436 diff changeset	1225
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1226 bool ServerIndex::LookupMetadata(std::string& target,
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1227 const std::string& publicId,
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1228 MetadataType type)
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1229 {
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1230 boost::mutex::scoped_lock lock(mutex_);
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1231
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1232 ResourceType rtype;
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1233 int64_t id;
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1234 if (!db_->LookupResource(publicId, id, rtype))
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1235 {
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1236 throw OrthancException(ErrorCode_UnknownResource);
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1237 }
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1238
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1239 return db_->LookupMetadata(target, id, type);
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1240 }
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1241
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1242
739 696dbb4fd390 api uniformization Sebastien Jodogne <s.jodogne@gmail.com> parents: 714 diff changeset	1243 void ServerIndex::ListAvailableMetadata(std::list<MetadataType>& target,
436 d51186bf7602 read access to metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 434 diff changeset	1244 const std::string& publicId)
d51186bf7602 read access to metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 434 diff changeset	1245 {
d51186bf7602 read access to metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 434 diff changeset	1246 boost::mutex::scoped_lock lock(mutex_);
d51186bf7602 read access to metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 434 diff changeset	1247
d51186bf7602 read access to metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 434 diff changeset	1248 ResourceType rtype;
d51186bf7602 read access to metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 434 diff changeset	1249 int64_t id;
d51186bf7602 read access to metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 434 diff changeset	1250 if (!db_->LookupResource(publicId, id, rtype))
d51186bf7602 read access to metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 434 diff changeset	1251 {
d51186bf7602 read access to metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 434 diff changeset	1252 throw OrthancException(ErrorCode_UnknownResource);
d51186bf7602 read access to metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 434 diff changeset	1253 }
d51186bf7602 read access to metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 434 diff changeset	1254
739 696dbb4fd390 api uniformization Sebastien Jodogne <s.jodogne@gmail.com> parents: 714 diff changeset	1255 db_->ListAvailableMetadata(target, id);
436 d51186bf7602 read access to metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 434 diff changeset	1256 }
d51186bf7602 read access to metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 434 diff changeset	1257
d51186bf7602 read access to metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 434 diff changeset	1258
697 dd1ce9a2844c access to attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 689 diff changeset	1259 void ServerIndex::ListAvailableAttachments(std::list<FileContentType>& target,
dd1ce9a2844c access to attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 689 diff changeset	1260 const std::string& publicId,
dd1ce9a2844c access to attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 689 diff changeset	1261 ResourceType expectedType)
dd1ce9a2844c access to attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 689 diff changeset	1262 {
dd1ce9a2844c access to attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 689 diff changeset	1263 boost::mutex::scoped_lock lock(mutex_);
dd1ce9a2844c access to attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 689 diff changeset	1264
dd1ce9a2844c access to attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 689 diff changeset	1265 ResourceType type;
dd1ce9a2844c access to attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 689 diff changeset	1266 int64_t id;
dd1ce9a2844c access to attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 689 diff changeset	1267 if (!db_->LookupResource(publicId, id, type) \|\|
dd1ce9a2844c access to attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 689 diff changeset	1268 expectedType != type)
dd1ce9a2844c access to attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 689 diff changeset	1269 {
dd1ce9a2844c access to attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 689 diff changeset	1270 throw OrthancException(ErrorCode_UnknownResource);
dd1ce9a2844c access to attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 689 diff changeset	1271 }
dd1ce9a2844c access to attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 689 diff changeset	1272
dd1ce9a2844c access to attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 689 diff changeset	1273 db_->ListAvailableAttachments(target, id);
dd1ce9a2844c access to attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 689 diff changeset	1274 }
dd1ce9a2844c access to attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 689 diff changeset	1275
dd1ce9a2844c access to attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 689 diff changeset	1276
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1277 bool ServerIndex::LookupParent(std::string& target,
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1278 const std::string& publicId)
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1279 {
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1280 boost::mutex::scoped_lock lock(mutex_);
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1281
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1282 ResourceType type;
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1283 int64_t id;
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1284 if (!db_->LookupResource(publicId, id, type))
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1285 {
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1286 throw OrthancException(ErrorCode_UnknownResource);
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1287 }
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1288
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1289 int64_t parentId;
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1290 if (db_->LookupParent(parentId, id))
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1291 {
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1292 target = db_->GetPublicId(parentId);
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1293 return true;
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1294 }
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1295 else
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1296 {
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1297 return false;
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1298 }
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1299 }
310 6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 306 diff changeset	1300
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 306 diff changeset	1301
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 306 diff changeset	1302 uint64_t ServerIndex::IncrementGlobalSequence(GlobalProperty sequence)
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 306 diff changeset	1303 {
6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 306 diff changeset	1304 boost::mutex::scoped_lock lock(mutex_);
311 26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1305
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1306 std::auto_ptr<SQLite::Transaction> transaction(db_->StartTransaction());
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1307
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1308 transaction->Begin();
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1309 uint64_t seq = db_->IncrementGlobalSequence(sequence);
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1310 transaction->Commit();
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1311
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 310 diff changeset	1312 return seq;
310 6ab6cdeedf4e global sequences Sebastien Jodogne <s.jodogne@gmail.com> parents: 306 diff changeset	1313 }
315 fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1314
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1315
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1316
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1317 void ServerIndex::LogChange(ChangeType changeType,
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1318 const std::string& publicId)
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1319 {
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1320 boost::mutex::scoped_lock lock(mutex_);
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1321 std::auto_ptr<SQLite::Transaction> transaction(db_->StartTransaction());
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1322 transaction->Begin();
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1323
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1324 int64_t id;
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1325 ResourceType type;
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1326 if (!db_->LookupResource(publicId, id, type))
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1327 {
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1328 throw OrthancException(ErrorCode_UnknownResource);
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1329 }
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1330
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1331 db_->LogChange(changeType, id, type);
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1332
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1333 transaction->Commit();
fc856d175d18 modifications Sebastien Jodogne <s.jodogne@gmail.com> parents: 311 diff changeset	1334 }
413 47d63c941902 clearing /exports and /changes Sebastien Jodogne <s.jodogne@gmail.com> parents: 399 diff changeset	1335
47d63c941902 clearing /exports and /changes Sebastien Jodogne <s.jodogne@gmail.com> parents: 399 diff changeset	1336
47d63c941902 clearing /exports and /changes Sebastien Jodogne <s.jodogne@gmail.com> parents: 399 diff changeset	1337 void ServerIndex::DeleteChanges()
47d63c941902 clearing /exports and /changes Sebastien Jodogne <s.jodogne@gmail.com> parents: 399 diff changeset	1338 {
47d63c941902 clearing /exports and /changes Sebastien Jodogne <s.jodogne@gmail.com> parents: 399 diff changeset	1339 boost::mutex::scoped_lock lock(mutex_);
47d63c941902 clearing /exports and /changes Sebastien Jodogne <s.jodogne@gmail.com> parents: 399 diff changeset	1340 db_->ClearTable("Changes");
47d63c941902 clearing /exports and /changes Sebastien Jodogne <s.jodogne@gmail.com> parents: 399 diff changeset	1341 }
47d63c941902 clearing /exports and /changes Sebastien Jodogne <s.jodogne@gmail.com> parents: 399 diff changeset	1342
47d63c941902 clearing /exports and /changes Sebastien Jodogne <s.jodogne@gmail.com> parents: 399 diff changeset	1343 void ServerIndex::DeleteExportedResources()
47d63c941902 clearing /exports and /changes Sebastien Jodogne <s.jodogne@gmail.com> parents: 399 diff changeset	1344 {
47d63c941902 clearing /exports and /changes Sebastien Jodogne <s.jodogne@gmail.com> parents: 399 diff changeset	1345 boost::mutex::scoped_lock lock(mutex_);
47d63c941902 clearing /exports and /changes Sebastien Jodogne <s.jodogne@gmail.com> parents: 399 diff changeset	1346 db_->ClearTable("ExportedResources");
47d63c941902 clearing /exports and /changes Sebastien Jodogne <s.jodogne@gmail.com> parents: 399 diff changeset	1347 }
440 23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1348
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1349
646 fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1350 void ServerIndex::GetStatisticsInternal(/* out */ uint64_t& compressedSize,
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1351 /* out */ uint64_t& uncompressedSize,
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1352 /* out */ unsigned int& countStudies,
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1353 /* out */ unsigned int& countSeries,
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1354 /* out */ unsigned int& countInstances,
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1355 /* in */ int64_t id,
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1356 /* in */ ResourceType type)
440 23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1357 {
646 fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1358 std::stack<int64_t> toExplore;
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1359 toExplore.push(id);
440 23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1360
646 fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1361 countInstances = 0;
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1362 countSeries = 0;
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1363 countStudies = 0;
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1364 compressedSize = 0;
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1365 uncompressedSize = 0;
440 23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1366
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1367 while (!toExplore.empty())
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1368 {
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1369 // Get the internal ID of the current resource
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1370 int64_t resource = toExplore.top();
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1371 toExplore.pop();
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1372
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1373 ResourceType thisType = db_->GetResourceType(resource);
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1374
702 7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1375 std::list<FileContentType> f;
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1376 db_->ListAvailableAttachments(f, resource);
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1377
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1378 for (std::list<FileContentType>::const_iterator
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1379 it = f.begin(); it != f.end(); ++it)
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1380 {
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1381 FileInfo attachment;
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1382 if (db_->LookupAttachment(attachment, resource, *it))
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1383 {
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1384 compressedSize += attachment.GetCompressedSize();
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1385 uncompressedSize += attachment.GetUncompressedSize();
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1386 }
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1387 }
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1388
440 23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1389 if (thisType == ResourceType_Instance)
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1390 {
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1391 countInstances++;
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1392 }
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1393 else
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1394 {
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1395 switch (thisType)
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1396 {
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1397 case ResourceType_Study:
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1398 countStudies++;
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1399 break;
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1400
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1401 case ResourceType_Series:
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1402 countSeries++;
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1403 break;
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1404
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1405 default:
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1406 break;
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1407 }
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1408
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1409 // Tag all the children of this resource as to be explored
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1410 std::list<int64_t> tmp;
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1411 db_->GetChildrenInternalId(tmp, resource);
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1412 for (std::list<int64_t>::const_iterator
656 08eca5d86aad fixes to cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 646 diff changeset	1413 it = tmp.begin(); it != tmp.end(); ++it)
440 23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1414 {
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1415 toExplore.push(*it);
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1416 }
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1417 }
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1418 }
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1419
646 fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1420 if (countStudies == 0)
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1421 {
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1422 countStudies = 1;
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1423 }
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1424
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1425 if (countSeries == 0)
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1426 {
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1427 countSeries = 1;
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1428 }
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1429 }
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1430
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1431
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1432
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1433 void ServerIndex::GetStatistics(Json::Value& target,
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1434 const std::string& publicId)
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1435 {
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1436 boost::mutex::scoped_lock lock(mutex_);
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1437
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1438 ResourceType type;
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1439 int64_t top;
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1440 if (!db_->LookupResource(publicId, top, type))
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1441 {
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1442 throw OrthancException(ErrorCode_UnknownResource);
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1443 }
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1444
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1445 uint64_t uncompressedSize;
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1446 uint64_t compressedSize;
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1447 unsigned int countStudies;
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1448 unsigned int countSeries;
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1449 unsigned int countInstances;
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1450 GetStatisticsInternal(compressedSize, uncompressedSize, countStudies,
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1451 countSeries, countInstances, top, type);
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1452
440 23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1453 target = Json::objectValue;
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1454 target["DiskSize"] = boost::lexical_cast<std::string>(compressedSize);
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1455 target["DiskSizeMB"] = boost::lexical_cast<unsigned int>(compressedSize / MEGA_BYTES);
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1456 target["UncompressedSize"] = boost::lexical_cast<std::string>(uncompressedSize);
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1457 target["UncompressedSizeMB"] = boost::lexical_cast<unsigned int>(uncompressedSize / MEGA_BYTES);
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1458
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1459 switch (type)
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1460 {
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1461 // Do NOT add "break" below this point!
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1462 case ResourceType_Patient:
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1463 target["CountStudies"] = countStudies;
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1464
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1465 case ResourceType_Study:
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1466 target["CountSeries"] = countSeries;
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1467
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1468 case ResourceType_Series:
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1469 target["CountInstances"] = countInstances;
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1470
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1471 case ResourceType_Instance:
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1472 default:
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1473 break;
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1474 }
23e5b35e3c5c statistics for patient/studies/series/instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 438 diff changeset	1475 }
511 3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1476
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1477
646 fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1478 void ServerIndex::GetStatistics(/* out */ uint64_t& compressedSize,
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1479 /* out */ uint64_t& uncompressedSize,
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1480 /* out */ unsigned int& countStudies,
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1481 /* out */ unsigned int& countSeries,
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1482 /* out */ unsigned int& countInstances,
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1483 const std::string& publicId)
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1484 {
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1485 boost::mutex::scoped_lock lock(mutex_);
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1486
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1487 ResourceType type;
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1488 int64_t top;
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1489 if (!db_->LookupResource(publicId, top, type))
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1490 {
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1491 throw OrthancException(ErrorCode_UnknownResource);
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1492 }
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1493
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1494 GetStatisticsInternal(compressedSize, uncompressedSize, countStudies,
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1495 countSeries, countInstances, top, type);
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1496 }
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1497
fb49bf72ac2d fix issue 7 Sebastien Jodogne <s.jodogne@gmail.com> parents: 615 diff changeset	1498
511 3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1499 void ServerIndex::UnstableResourcesMonitorThread(ServerIndex* that)
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1500 {
810 401a9633e492 configuration into a namespace Sebastien Jodogne <s.jodogne@gmail.com> parents: 744 diff changeset	1501 int stableAge = Configuration::GetGlobalIntegerParameter("StableAge", 60);
511 3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1502 if (stableAge <= 0)
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1503 {
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1504 stableAge = 60;
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1505 }
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1506
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1507 LOG(INFO) << "Starting the monitor for stable resources (stable age = " << stableAge << ")";
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1508
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1509 while (!that->done_)
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1510 {
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1511 // Check for stable resources each second
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1512 boost::this_thread::sleep(boost::posix_time::seconds(1));
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1513
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1514 boost::mutex::scoped_lock lock(that->mutex_);
513 935e8c7e0b18 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 511 diff changeset	1515
511 3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1516 while (!that->unstableResources_.IsEmpty() &&
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1517 that->unstableResources_.GetOldestPayload().GetAge() > static_cast<unsigned int>(stableAge))
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1518 {
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1519 // This DICOM resource has not received any new instance for
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1520 // some time. It can be considered as stable.
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1521
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1522 UnstableResourcePayload payload;
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1523 int64_t id = that->unstableResources_.RemoveOldest(payload);
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1524
513 935e8c7e0b18 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 511 diff changeset	1525 // Ensure that the resource is still existing before logging the change
935e8c7e0b18 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 511 diff changeset	1526 if (that->db_->IsExistingResource(id))
511 3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1527 {
513 935e8c7e0b18 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 511 diff changeset	1528 switch (payload.type_)
935e8c7e0b18 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 511 diff changeset	1529 {
935e8c7e0b18 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 511 diff changeset	1530 case Orthanc::ResourceType_Patient:
935e8c7e0b18 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 511 diff changeset	1531 that->db_->LogChange(ChangeType_StablePatient, id, ResourceType_Patient);
935e8c7e0b18 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 511 diff changeset	1532 break;
511 3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1533
513 935e8c7e0b18 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 511 diff changeset	1534 case Orthanc::ResourceType_Study:
935e8c7e0b18 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 511 diff changeset	1535 that->db_->LogChange(ChangeType_StableStudy, id, ResourceType_Study);
935e8c7e0b18 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 511 diff changeset	1536 break;
511 3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1537
513 935e8c7e0b18 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 511 diff changeset	1538 case Orthanc::ResourceType_Series:
935e8c7e0b18 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 511 diff changeset	1539 that->db_->LogChange(ChangeType_StableSeries, id, ResourceType_Series);
935e8c7e0b18 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 511 diff changeset	1540 break;
935e8c7e0b18 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 511 diff changeset	1541
935e8c7e0b18 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 511 diff changeset	1542 default:
935e8c7e0b18 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 511 diff changeset	1543 throw OrthancException(ErrorCode_InternalError);
935e8c7e0b18 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 511 diff changeset	1544 }
935e8c7e0b18 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 511 diff changeset	1545
935e8c7e0b18 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 511 diff changeset	1546 //LOG(INFO) << "Stable resource: " << EnumerationToString(payload.type_) << " " << id;
511 3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1547 }
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1548 }
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1549 }
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1550
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1551 LOG(INFO) << "Closing the monitor thread for stable resources";
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1552 }
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1553
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1554
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1555 void ServerIndex::MarkAsUnstable(int64_t id,
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1556 Orthanc::ResourceType type)
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1557 {
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1558 // WARNING: Before calling this method, "mutex_" must be locked.
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1559
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1560 assert(type == Orthanc::ResourceType_Patient \|\|
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1561 type == Orthanc::ResourceType_Study \|\|
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1562 type == Orthanc::ResourceType_Series);
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1563
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1564 unstableResources_.AddOrMakeMostRecent(id, type);
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1565 //LOG(INFO) << "Unstable resource: " << EnumerationToString(type) << " " << id;
3b735fdf320b monitoring of stable patients/studies/series Sebastien Jodogne <s.jodogne@gmail.com> parents: 440 diff changeset	1566 }
521 2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1567
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1568
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1569
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1570 void ServerIndex::LookupTagValue(std::list<std::string>& result,
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1571 DicomTag tag,
615 ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1572 const std::string& value,
ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1573 ResourceType type)
ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1574 {
ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1575 result.clear();
ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1576
ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1577 boost::mutex::scoped_lock lock(mutex_);
ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1578
ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1579 std::list<int64_t> id;
ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1580 db_->LookupTagValue(id, tag, value);
ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1581
ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1582 for (std::list<int64_t>::const_iterator
656 08eca5d86aad fixes to cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 646 diff changeset	1583 it = id.begin(); it != id.end(); ++it)
615 ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1584 {
ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1585 if (db_->GetResourceType(*it) == type)
ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1586 {
ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1587 result.push_back(db_->GetPublicId(*it));
ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1588 }
ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1589 }
ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1590 }
ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1591
ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1592
ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1593 void ServerIndex::LookupTagValue(std::list<std::string>& result,
ec0b7a51d7bd speed up find Sebastien Jodogne <s.jodogne@gmail.com> parents: 585 diff changeset	1594 DicomTag tag,
521 2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1595 const std::string& value)
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1596 {
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1597 result.clear();
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1598
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1599 boost::mutex::scoped_lock lock(mutex_);
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1600
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1601 std::list<int64_t> id;
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1602 db_->LookupTagValue(id, tag, value);
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1603
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1604 for (std::list<int64_t>::const_iterator
656 08eca5d86aad fixes to cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 646 diff changeset	1605 it = id.begin(); it != id.end(); ++it)
521 2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1606 {
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1607 result.push_back(db_->GetPublicId(*it));
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1608 }
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1609 }
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1610
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1611
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1612 void ServerIndex::LookupTagValue(std::list<std::string>& result,
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1613 const std::string& value)
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1614 {
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1615 result.clear();
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1616
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1617 boost::mutex::scoped_lock lock(mutex_);
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1618
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1619 std::list<int64_t> id;
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1620 db_->LookupTagValue(id, value);
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1621
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1622 for (std::list<int64_t>::const_iterator
656 08eca5d86aad fixes to cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 646 diff changeset	1623 it = id.begin(); it != id.end(); ++it)
521 2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1624 {
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1625 result.push_back(db_->GetPublicId(*it));
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1626 }
2c739f76d0bb lookup tag values Sebastien Jodogne <s.jodogne@gmail.com> parents: 513 diff changeset	1627 }
699 2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1628
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1629
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1630 StoreStatus ServerIndex::AddAttachment(const FileInfo& attachment,
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1631 const std::string& publicId)
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1632 {
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1633 boost::mutex::scoped_lock lock(mutex_);
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1634
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1635 Transaction t(*this);
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1636
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1637 ResourceType resourceType;
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1638 int64_t resourceId;
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1639 if (!db_->LookupResource(publicId, resourceId, resourceType))
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1640 {
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1641 return StoreStatus_Failure; // Inexistent resource
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1642 }
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1643
704 4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1644 // Remove possible previous attachment
699 2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1645 db_->DeleteAttachment(resourceId, attachment.GetContentType());
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1646
704 4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1647 // Locate the patient of the target resource
4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1648 int64_t patientId = resourceId;
4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1649 for (;;)
4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1650 {
4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1651 int64_t parent;
4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1652 if (db_->LookupParent(parent, patientId))
4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1653 {
4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1654 // We have not reached the patient level yet
4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1655 patientId = parent;
4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1656 }
4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1657 else
4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1658 {
4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1659 // We have reached the patient level
4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1660 break;
4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1661 }
4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1662 }
4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1663
4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1664 // Possibly apply the recycling mechanism while preserving this patient
4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1665 assert(db_->GetResourceType(patientId) == ResourceType_Patient);
4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1666 Recycle(attachment.GetCompressedSize(), db_->GetPublicId(patientId));
4789da60d655 recycling with custom attachments Sebastien Jodogne <s.jodogne@gmail.com> parents: 702 diff changeset	1667
699 2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1668 db_->AddAttachment(resourceId, attachment);
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1669
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1670 t.Commit(attachment.GetCompressedSize());
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1671
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1672 return StoreStatus_Success;
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1673 }
2929e17f8447 add attachments to resources Sebastien Jodogne <s.jodogne@gmail.com> parents: 697 diff changeset	1674
702 7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1675
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1676 void ServerIndex::DeleteAttachment(const std::string& publicId,
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1677 FileContentType type)
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1678 {
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1679 boost::mutex::scoped_lock lock(mutex_);
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1680 listener_->Reset();
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1681
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1682 Transaction t(*this);
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1683
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1684 ResourceType rtype;
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1685 int64_t id;
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1686 if (!db_->LookupResource(publicId, id, rtype))
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1687 {
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1688 throw OrthancException(ErrorCode_UnknownResource);
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1689 }
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1690
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1691 db_->DeleteAttachment(id, type);
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1692
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1693 t.Commit(0);
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1694 }
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1695
7592a48e97e4 delete custom attachment Sebastien Jodogne <s.jodogne@gmail.com> parents: 701 diff changeset	1696
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1697 }

Mercurial > hg > orthanc

annotate OrthancServer/ServerIndex.cpp @ 983:80d4f1618b33 plugins