Mercurial > hg > orthanc

annotate OrthancServer/ServerJobs/MergeStudyJob.cpp @ 3366:7a4d586caf2d

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author Sebastien Jodogne <s.jodogne@gmail.com>
date Mon, 13 May 2019 16:04:45 +0200
parents beeeb6096f27
children 69e49fc044f8
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2019 Osimis S.A., Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU General Public License as
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9 * published by the Free Software Foundation, either version 3 of the
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10 * License, or (at your option) any later version.
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11 *
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12 * In addition, as a special exception, the copyright holders of this
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13 * program give permission to link the code of its release with the
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14 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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15 * that use the same license as the "OpenSSL" library), and distribute
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16 * the linked executables. You must obey the GNU General Public License
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17 * in all respects for all of the code used other than "OpenSSL". If you
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18 * modify file(s) with this exception, you may extend this exception to
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19 * your version of the file(s), but you are not obligated to do so. If
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20 * you do not wish to do so, delete this exception statement from your
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21 * version. If you delete this exception statement from all source files
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22 * in the program, then also delete it here.
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23 *
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24 * This program is distributed in the hope that it will be useful, but
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25 * WITHOUT ANY WARRANTY; without even the implied warranty of
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26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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27 * General Public License for more details.
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28 *
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29 * You should have received a copy of the GNU General Public License
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30 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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31 **/
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34 #include "MergeStudyJob.h"
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36 #include "../../Core/DicomParsing/FromDcmtkBridge.h"
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37 #include "../../Core/Logging.h"
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38 #include "../../Core/SerializationToolbox.h"
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39 #include "../ServerContext.h"
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42 namespace Orthanc
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43 {
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44 void MergeStudyJob::AddSourceSeriesInternal(const std::string& series)
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45 {
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46 // Generate a target SeriesInstanceUID for this series
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47 seriesUidMap_[series] = FromDcmtkBridge::GenerateUniqueIdentifier(ResourceType_Series);
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48
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49 // Add all the instances of the series as to be processed
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50 std::list<std::string> instances;
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51 context_.GetIndex().GetChildren(instances, series);
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52
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53 for (std::list<std::string>::const_iterator
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54 it = instances.begin(); it != instances.end(); ++it)
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55 {
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56 AddInstance(*it);
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57 }
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58 }
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61 void MergeStudyJob::AddSourceStudyInternal(const std::string& study)
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62 {
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63 if (study == targetStudy_)
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64 {
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65 throw OrthancException(ErrorCode_UnknownResource,
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66 "Cannot merge a study into the same study: " + study);
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67 }
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68 else
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69 {
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70 std::list<std::string> series;
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71 context_.GetIndex().GetChildren(series, study);
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72
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73 for (std::list<std::string>::const_iterator
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74 it = series.begin(); it != series.end(); ++it)
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75 {
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76 AddSourceSeriesInternal(*it);
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77 }
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78 }
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79 }
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81
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82 bool MergeStudyJob::HandleInstance(const std::string& instance)
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83 {
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84 /**
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85 * Retrieve the DICOM instance to be modified
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86 **/
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87
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88 std::auto_ptr<ParsedDicomFile> modified;
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89
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90 try
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91 {
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92 ServerContext::DicomCacheLocker locker(context_, instance);
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93 modified.reset(locker.GetDicom().Clone(true));
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94 }
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95 catch (OrthancException&)
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96 {
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97 LOG(WARNING) << "An instance was removed after the job was issued: " << instance;
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98 return false;
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99 }
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100
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101
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102 /**
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103 * Chose the target UIDs
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104 **/
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105
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106 std::string series = modified->GetHasher().HashSeries();
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107
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108 SeriesUidMap::const_iterator targetSeriesUid = seriesUidMap_.find(series);
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109
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110 if (targetSeriesUid == seriesUidMap_.end())
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111 {
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112 throw OrthancException(ErrorCode_BadFileFormat); // Should never happen
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113 }
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114
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115
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116 /**
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117 * Copy the tags from the "Patient Module Attributes" and "General
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118 * Study Module Attributes" modules of the target study
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119 **/
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120
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121 for (std::set<DicomTag>::const_iterator it = removals_.begin();
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122 it != removals_.end(); ++it)
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123 {
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124 modified->Remove(*it);
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125 }
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diff changeset
126
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diff changeset
127 for (Replacements::const_iterator it = replacements_.begin();
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128 it != replacements_.end(); ++it)
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129 {
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130 modified->ReplacePlainString(it->first, it->second);
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131 }
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132
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133
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134 /**
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135 * Store the new instance into Orthanc
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136 **/
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diff changeset
137
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138 modified->ReplacePlainString(DICOM_TAG_SERIES_INSTANCE_UID, targetSeriesUid->second);
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139
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140 DicomInstanceToStore toStore;
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141 toStore.SetOrigin(origin_);
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142 toStore.SetParsedDicomFile(*modified);
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143
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144 std::string modifiedInstance;
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145 if (context_.Store(modifiedInstance, toStore) != StoreStatus_Success)
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146 {
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147 LOG(ERROR) << "Error while storing a modified instance " << instance;
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148 return false;
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149 }
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150
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151 return true;
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152 }
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153
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154
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155 bool MergeStudyJob::HandleTrailingStep()
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156 {
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157 if (!keepSource_)
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158 {
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159 const size_t n = GetInstancesCount();
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160
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161 for (size_t i = 0; i < n; i++)
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162 {
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163 Json::Value tmp;
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164 context_.DeleteResource(tmp, GetInstance(i), ResourceType_Instance);
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165 }
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166 }
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167
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168 return true;
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169 }
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170
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171
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172 MergeStudyJob::MergeStudyJob(ServerContext& context,
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173 const std::string& targetStudy) :
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174 context_(context),
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175 keepSource_(false),
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176 targetStudy_(targetStudy)
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177 {
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178 /**
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179 * Check the validity of the input ID
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180 **/
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181
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182 ResourceType type;
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183
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184 if (!context_.GetIndex().LookupResourceType(type, targetStudy) ||
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185 type != ResourceType_Study)
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186 {
2955
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187 throw OrthancException(ErrorCode_UnknownResource,
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188 "Cannot merge into an unknown study: " + targetStudy);
2853
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189 }
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diff changeset
190
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parents:
diff changeset
191
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diff changeset
192 /**
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diff changeset
193 * Detect the tags to be removed/replaced by parsing one child
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194 * instance of the study
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diff changeset
195 **/
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196
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diff changeset
197 DicomTag::AddTagsForModule(removals_, DicomModule_Patient);
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198 DicomTag::AddTagsForModule(removals_, DicomModule_Study);
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199
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diff changeset
200 std::list<std::string> instances;
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diff changeset
201 context_.GetIndex().GetChildInstances(instances, targetStudy);
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202
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diff changeset
203 if (instances.empty())
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204 {
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diff changeset
205 throw OrthancException(ErrorCode_UnknownResource);
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diff changeset
206 }
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diff changeset
207
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diff changeset
208 DicomMap dicom;
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209
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parents:
diff changeset
210 {
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diff changeset
211 ServerContext::DicomCacheLocker locker(context_, instances.front());
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parents:
diff changeset
212 locker.GetDicom().ExtractDicomSummary(dicom);
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diff changeset
213 }
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diff changeset
214
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diff changeset
215 const std::set<DicomTag> moduleTags = removals_;
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216 for (std::set<DicomTag>::const_iterator it = moduleTags.begin();
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parents:
diff changeset
217 it != moduleTags.end(); ++it)
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diff changeset
218 {
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diff changeset
219 const DicomValue* value = dicom.TestAndGetValue(*it);
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diff changeset
220 std::string str;
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diff changeset
221
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diff changeset
222 if (value != NULL &&
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diff changeset
223 value->CopyToString(str, false))
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diff changeset
224 {
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diff changeset
225 removals_.erase(*it);
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diff changeset
226 replacements_.insert(std::make_pair(*it, str));
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diff changeset
227 }
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parents:
diff changeset
228 }
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parents:
diff changeset
229 }
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parents:
diff changeset
230
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parents:
diff changeset
231
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parents:
diff changeset
232 void MergeStudyJob::SetOrigin(const DicomInstanceOrigin& origin)
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diff changeset
233 {
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parents:
diff changeset
234 if (IsStarted())
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diff changeset
235 {
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diff changeset
236 throw OrthancException(ErrorCode_BadSequenceOfCalls);
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parents:
diff changeset
237 }
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parents:
diff changeset
238 else
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parents:
diff changeset
239 {
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parents:
diff changeset
240 origin_ = origin;
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parents:
diff changeset
241 }
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parents:
diff changeset
242 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
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parents:
diff changeset
243
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parents:
diff changeset
244
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parents:
diff changeset
245 void MergeStudyJob::SetOrigin(const RestApiCall& call)
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diff changeset
246 {
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parents:
diff changeset
247 SetOrigin(DicomInstanceOrigin::FromRest(call));
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diff changeset
248 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
249
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
250
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
251 void MergeStudyJob::AddSource(const std::string& studyOrSeries)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
252 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
253 ResourceType level;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
254
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
255 if (IsStarted())
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
256 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
257 throw OrthancException(ErrorCode_BadSequenceOfCalls);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
258 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
259 else if (!context_.GetIndex().LookupResourceType(level, studyOrSeries))
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
260 {
2955
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parents: 2860
diff changeset
261 throw OrthancException(ErrorCode_UnknownResource,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
262 "Cannot find this resource: " + studyOrSeries);
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
263 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
264 else
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
265 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
266 switch (level)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
267 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
268 case ResourceType_Study:
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
269 AddSourceStudyInternal(studyOrSeries);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
270 break;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
271
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
272 case ResourceType_Series:
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
273 AddSourceSeries(studyOrSeries);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
274 break;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
275
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
276 default:
2955
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
277 throw OrthancException(ErrorCode_UnknownResource,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
278 "This resource is neither a study, nor a series: " +
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
279 studyOrSeries + " is a " +
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
280 std::string(EnumerationToString(level)));
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
281 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
282 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
283 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
284
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
285
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
286 void MergeStudyJob::AddSourceSeries(const std::string& series)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
287 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
288 std::string parent;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
289
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
290 if (IsStarted())
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
291 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
292 throw OrthancException(ErrorCode_BadSequenceOfCalls);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
293 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
294 else if (!context_.GetIndex().LookupParent(parent, series, ResourceType_Study))
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
295 {
2955
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parents: 2860
diff changeset
296 throw OrthancException(ErrorCode_UnknownResource,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
297 "This resource is not a series: " + series);
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
298 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
299 else if (parent == targetStudy_)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
300 {
2955
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parents: 2860
diff changeset
301 throw OrthancException(ErrorCode_UnknownResource,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
302 "Cannot merge series " + series +
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
303 " into its parent study " + targetStudy_);
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
304 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
305 else
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
306 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
307 AddSourceSeriesInternal(series);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
308 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
309 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
310
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
311
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
312 void MergeStudyJob::AddSourceStudy(const std::string& study)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
313 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
314 ResourceType actualLevel;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
315
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
316 if (IsStarted())
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
317 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
318 throw OrthancException(ErrorCode_BadSequenceOfCalls);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
319 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
320 else if (!context_.GetIndex().LookupResourceType(actualLevel, study) ||
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
321 actualLevel != ResourceType_Study)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
322 {
2955
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
323 throw OrthancException(ErrorCode_UnknownResource,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
324 "This resource is not a study: " + study);
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
325 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
326 else
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
327 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
328 AddSourceStudyInternal(study);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
329 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
330 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
331
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
332
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
333 void MergeStudyJob::SetKeepSource(bool keep)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
334 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
335 if (IsStarted())
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
336 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
337 throw OrthancException(ErrorCode_BadSequenceOfCalls);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
338 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
339
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
340 keepSource_ = keep;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
341 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
342
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
343
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
344 void MergeStudyJob::GetPublicContent(Json::Value& value)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
345 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
346 SetOfInstancesJob::GetPublicContent(value);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
347 value["TargetStudy"] = targetStudy_;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
348 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
349
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
350
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
351 static const char* KEEP_SOURCE = "KeepSource";
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
352 static const char* TARGET_STUDY = "TargetStudy";
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
353 static const char* REPLACEMENTS = "Replacements";
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
354 static const char* REMOVALS = "Removals";
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
355 static const char* SERIES_UID_MAP = "SeriesUIDMap";
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
356 static const char* ORIGIN = "Origin";
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
357
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
358
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
359 MergeStudyJob::MergeStudyJob(ServerContext& context,
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
360 const Json::Value& serialized) :
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
361 SetOfInstancesJob(serialized), // (*)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
362 context_(context)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
363 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
364 if (!HasTrailingStep())
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
365 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
366 // Should have been set by (*)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
367 throw OrthancException(ErrorCode_InternalError);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
368 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
369
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
370 keepSource_ = SerializationToolbox::ReadBoolean(serialized, KEEP_SOURCE);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
371 targetStudy_ = SerializationToolbox::ReadString(serialized, TARGET_STUDY);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
372 SerializationToolbox::ReadMapOfTags(replacements_, serialized, REPLACEMENTS);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
373 SerializationToolbox::ReadSetOfTags(removals_, serialized, REMOVALS);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
374 SerializationToolbox::ReadMapOfStrings(seriesUidMap_, serialized, SERIES_UID_MAP);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
375 origin_ = DicomInstanceOrigin(serialized[ORIGIN]);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
376 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
377
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
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378
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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379 bool MergeStudyJob::Serialize(Json::Value& target)
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Sebastien Jodogne <s.jodogne@gmail.com>
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380 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
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381 if (!SetOfInstancesJob::Serialize(target))
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Sebastien Jodogne <s.jodogne@gmail.com>
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382 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
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383 return false;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
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384 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
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385 else
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
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386 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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387 target[KEEP_SOURCE] = keepSource_;
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Sebastien Jodogne <s.jodogne@gmail.com>
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388 target[TARGET_STUDY] = targetStudy_;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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389 SerializationToolbox::WriteMapOfTags(target, replacements_, REPLACEMENTS);
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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390 SerializationToolbox::WriteSetOfTags(target, removals_, REMOVALS);
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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391 SerializationToolbox::WriteMapOfStrings(target, seriesUidMap_, SERIES_UID_MAP);
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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392 origin_.Serialize(target[ORIGIN]);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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393
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Sebastien Jodogne <s.jodogne@gmail.com>
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394 return true;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
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395 }
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Sebastien Jodogne <s.jodogne@gmail.com>
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396 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
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397 }