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annotate OrthancServer/ServerContext.cpp @ 2161:7219cdce7bba

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author Sebastien Jodogne <s.jodogne@gmail.com>
date Mon, 21 Nov 2016 09:19:53 +0100
parents dd609a99d39a
children a3a65de1840f
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 *
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6 * This program is free software: you can redistribute it and/or
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7 * modify it under the terms of the GNU General Public License as
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8 * published by the Free Software Foundation, either version 3 of the
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9 * License, or (at your option) any later version.
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10 *
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11 * In addition, as a special exception, the copyright holders of this
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12 * program give permission to link the code of its release with the
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13 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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14 * that use the same license as the "OpenSSL" library), and distribute
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15 * the linked executables. You must obey the GNU General Public License
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16 * in all respects for all of the code used other than "OpenSSL". If you
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17 * modify file(s) with this exception, you may extend this exception to
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18 * your version of the file(s), but you are not obligated to do so. If
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19 * you do not wish to do so, delete this exception statement from your
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20 * version. If you delete this exception statement from all source files
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21 * in the program, then also delete it here.
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22 *
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23 * This program is distributed in the hope that it will be useful, but
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24 * WITHOUT ANY WARRANTY; without even the implied warranty of
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25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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26 * General Public License for more details.
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27 *
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28 * You should have received a copy of the GNU General Public License
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29 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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30 **/
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31
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32
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33 #include "PrecompiledHeadersServer.h"
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34 #include "ServerContext.h"
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35
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36 #include "../Core/FileStorage/StorageAccessor.h"
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37 #include "../Core/HttpServer/FilesystemHttpSender.h"
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38 #include "../Core/HttpServer/HttpStreamTranscoder.h"
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39 #include "../Core/Logging.h"
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40 #include "FromDcmtkBridge.h"
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41 #include "ServerToolbox.h"
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42 #include "OrthancInitialization.h"
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43
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44 #include <EmbeddedResources.h>
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45 #include <dcmtk/dcmdata/dcfilefo.h>
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47
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48 #include "Scheduler/CallSystemCommand.h"
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49 #include "Scheduler/DeleteInstanceCommand.h"
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50 #include "Scheduler/ModifyInstanceCommand.h"
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51 #include "Scheduler/StoreScuCommand.h"
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52 #include "Scheduler/StorePeerCommand.h"
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53 #include "OrthancRestApi/OrthancRestApi.h"
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54 #include "../Plugins/Engine/OrthancPlugins.h"
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55 #include "Search/LookupResource.h"
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56
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57
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58 #define ENABLE_DICOM_CACHE 1
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59
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60 static const size_t DICOM_CACHE_SIZE = 2;
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61
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62 /**
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63 * IMPORTANT: We make the assumption that the same instance of
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64 * FileStorage can be accessed from multiple threads. This seems OK
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65 * since the filesystem implements the required locking mechanisms,
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66 * but maybe a read-writer lock on the "FileStorage" could be
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67 * useful. Conversely, "ServerIndex" already implements mutex-based
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68 * locking.
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69 **/
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70
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71 namespace Orthanc
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72 {
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73 void ServerContext::ChangeThread(ServerContext* that)
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74 {
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75 while (!that->done_)
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76 {
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77 std::auto_ptr<IDynamicObject> obj(that->pendingChanges_.Dequeue(100));
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78
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79 if (obj.get() != NULL)
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80 {
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81 const ServerIndexChange& change = dynamic_cast<const ServerIndexChange&>(*obj.get());
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82
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83 boost::recursive_mutex::scoped_lock lock(that->listenersMutex_);
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84 for (ServerListeners::iterator it = that->listeners_.begin();
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85 it != that->listeners_.end(); ++it)
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86 {
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87 try
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88 {
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89 try
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90 {
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91 it->GetListener().SignalChange(change);
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92 }
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93 catch (std::bad_alloc&)
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94 {
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95 LOG(ERROR) << "Not enough memory while signaling a change";
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96 }
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97 catch (...)
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98 {
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99 throw OrthancException(ErrorCode_InternalError);
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100 }
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101 }
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102 catch (OrthancException& e)
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103 {
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104 LOG(ERROR) << "Error in the " << it->GetDescription()
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105 << " callback while signaling a change: " << e.What()
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106 << " (code " << e.GetErrorCode() << ")";
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107 }
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108 }
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109 }
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110 }
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111 }
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112
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113
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114 ServerContext::ServerContext(IDatabaseWrapper& database,
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115 IStorageArea& area) :
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116 index_(*this, database),
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117 area_(area),
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118 compressionEnabled_(false),
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119 storeMD5_(true),
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120 provider_(*this),
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121 dicomCache_(provider_, DICOM_CACHE_SIZE),
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122 scheduler_(Configuration::GetGlobalUnsignedIntegerParameter("LimitJobs", 10)),
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123 lua_(*this),
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124 #if ORTHANC_ENABLE_PLUGINS == 1
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125 plugins_(NULL),
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126 #endif
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127 done_(false),
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128 queryRetrieveArchive_(Configuration::GetGlobalUnsignedIntegerParameter("QueryRetrieveSize", 10)),
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129 defaultLocalAet_(Configuration::GetGlobalStringParameter("DicomAet", "ORTHANC"))
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130 {
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131 uint64_t s = Configuration::GetGlobalUnsignedIntegerParameter("DicomAssociationCloseDelay", 5); // In seconds
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21ea32170764 Option "DicomAssociationCloseDelay" to set delay before closing DICOM association
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132 scu_.SetMillisecondsBeforeClose(s * 1000); // Milliseconds are expected here
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133
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134 listeners_.push_back(ServerListener(lua_, "Lua"));
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135
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136 changeThread_ = boost::thread(ChangeThread, this);
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137 }
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138
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139
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140
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141 ServerContext::~ServerContext()
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142 {
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143 if (!done_)
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144 {
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145 LOG(ERROR) << "INTERNAL ERROR: ServerContext::Stop() should be invoked manually to avoid mess in the destruction order!";
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146 Stop();
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147 }
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148 }
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149
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150
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151 void ServerContext::Stop()
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152 {
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153 if (!done_)
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154 {
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155 {
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156 boost::recursive_mutex::scoped_lock lock(listenersMutex_);
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157 listeners_.clear();
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158 }
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159
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160 done_ = true;
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161
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162 if (changeThread_.joinable())
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163 {
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164 changeThread_.join();
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165 }
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166
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167 scu_.Finalize();
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168
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169 // Do not change the order below!
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170 scheduler_.Stop();
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171 index_.Stop();
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172 }
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173 }
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174
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175
236
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176 void ServerContext::SetCompressionEnabled(bool enabled)
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177 {
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178 if (enabled)
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179 LOG(WARNING) << "Disk compression is enabled";
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180 else
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181 LOG(WARNING) << "Disk compression is disabled";
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182
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183 compressionEnabled_ = enabled;
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184 }
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185
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186
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187 void ServerContext::RemoveFile(const std::string& fileUuid,
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188 FileContentType type)
227
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189 {
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190 area_.Remove(fileUuid, type);
227
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191 }
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192
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193
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194 StoreStatus ServerContext::Store(std::string& resultPublicId,
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195 DicomInstanceToStore& dicom)
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196 {
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197 try
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198 {
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199 StorageAccessor accessor(area_);
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200
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201 DicomInstanceHasher hasher(dicom.GetSummary());
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202 resultPublicId = hasher.HashInstance();
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203
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204 Json::Value simplifiedTags;
2120
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205 ServerToolbox::SimplifyTags(simplifiedTags, dicom.GetJson(), DicomToJsonFormat_Human);
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206
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207 // Test if the instance must be filtered out
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208 bool accepted = true;
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209
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210 {
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diff changeset
211 boost::recursive_mutex::scoped_lock lock(listenersMutex_);
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212
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213 for (ServerListeners::iterator it = listeners_.begin(); it != listeners_.end(); ++it)
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214 {
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215 try
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216 {
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217 if (!it->GetListener().FilterIncomingInstance(dicom, simplifiedTags))
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218 {
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219 accepted = false;
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220 break;
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221 }
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222 }
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223 catch (OrthancException& e)
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224 {
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225 LOG(ERROR) << "Error in the " << it->GetDescription()
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diff changeset
226 << " callback while receiving an instance: " << e.What()
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diff changeset
227 << " (code " << e.GetErrorCode() << ")";
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228 throw;
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229 }
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230 }
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231 }
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diff changeset
232
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233 if (!accepted)
1004
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diff changeset
234 {
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235 LOG(INFO) << "An incoming instance has been discarded by the filter";
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236 return StoreStatus_FilteredOut;
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237 }
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238
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239 // TODO Should we use "gzip" instead?
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240 CompressionType compression = (compressionEnabled_ ? CompressionType_ZlibWithSize : CompressionType_None);
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241
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diff changeset
242 FileInfo dicomInfo = accessor.Write(dicom.GetBufferData(), dicom.GetBufferSize(),
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diff changeset
243 FileContentType_Dicom, compression, storeMD5_);
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244 FileInfo jsonInfo = accessor.Write(dicom.GetJson().toStyledString(),
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diff changeset
245 FileContentType_DicomAsJson, compression, storeMD5_);
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246
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diff changeset
247 ServerIndex::Attachments attachments;
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248 attachments.push_back(dicomInfo);
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249 attachments.push_back(jsonInfo);
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diff changeset
250
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ace99e272203 access metadata in plugins
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251 typedef std::map<MetadataType, std::string> InstanceMetadata;
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252 InstanceMetadata instanceMetadata;
1822
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diff changeset
253 StoreStatus status = index_.Store(instanceMetadata, dicom, attachments);
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254
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255 // Only keep the metadata for the "instance" level
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diff changeset
256 dicom.GetMetadata().clear();
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257
ace99e272203 access metadata in plugins
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diff changeset
258 for (InstanceMetadata::const_iterator it = instanceMetadata.begin();
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diff changeset
259 it != instanceMetadata.end(); ++it)
1067
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diff changeset
260 {
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diff changeset
261 dicom.GetMetadata().insert(std::make_pair(std::make_pair(ResourceType_Instance, it->first),
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diff changeset
262 it->second));
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263 }
ace99e272203 access metadata in plugins
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diff changeset
264
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
265 if (status != StoreStatus_Success)
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
266 {
1549
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
267 accessor.Remove(dicomInfo);
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
268 accessor.Remove(jsonInfo);
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
269 }
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
270
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
271 switch (status)
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
272 {
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
273 case StoreStatus_Success:
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
274 LOG(INFO) << "New instance stored";
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
275 break;
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
276
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
277 case StoreStatus_AlreadyStored:
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
278 LOG(INFO) << "Already stored";
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
279 break;
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
280
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
281 case StoreStatus_Failure:
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
282 LOG(ERROR) << "Store failure";
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
283 break;
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
284
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
285 default:
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
286 // This should never happen
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
287 break;
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
288 }
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
289
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
290 if (status == StoreStatus_Success ||
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
291 status == StoreStatus_AlreadyStored)
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
292 {
1456
68827c07e683 fix recursive calls with Lua
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1453
diff changeset
293 boost::recursive_mutex::scoped_lock lock(listenersMutex_);
1453
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1447
diff changeset
294
1433
461e7554bff7 refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1427
diff changeset
295 for (ServerListeners::iterator it = listeners_.begin(); it != listeners_.end(); ++it)
1066
bb82e5e818e9 OnStoredInstance callback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1065
diff changeset
296 {
bb82e5e818e9 OnStoredInstance callback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1065
diff changeset
297 try
bb82e5e818e9 OnStoredInstance callback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1065
diff changeset
298 {
1574
0c29ebe80ac9 give access to full request origin in ReceivedInstanceFilter (Lua)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1550
diff changeset
299 it->GetListener().SignalStoredInstance(resultPublicId, dicom, simplifiedTags);
1066
bb82e5e818e9 OnStoredInstance callback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1065
diff changeset
300 }
bb82e5e818e9 OnStoredInstance callback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1065
diff changeset
301 catch (OrthancException& e)
bb82e5e818e9 OnStoredInstance callback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1065
diff changeset
302 {
1433
461e7554bff7 refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1427
diff changeset
303 LOG(ERROR) << "Error in the " << it->GetDescription()
2135
cadfe0a2a393 fix in the sample basic plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2134
diff changeset
304 << " callback while receiving an instance: " << e.What()
cadfe0a2a393 fix in the sample basic plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2134
diff changeset
305 << " (code " << e.GetErrorCode() << ")";
1066
bb82e5e818e9 OnStoredInstance callback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1065
diff changeset
306 }
bb82e5e818e9 OnStoredInstance callback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1065
diff changeset
307 }
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
308 }
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
309
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
310 return status;
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
311 }
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
312 catch (OrthancException& e)
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
313 {
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
314 if (e.GetErrorCode() == ErrorCode_InexistentTag)
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
315 {
2120
4b02ec79728a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
316 ServerToolbox::LogMissingRequiredTag(dicom.GetSummary());
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
317 }
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
318
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
319 throw;
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
320 }
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
321 }
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
322
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
323
1146
200fcac0deb4 optimization for access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1145
diff changeset
324 void ServerContext::AnswerAttachment(RestApiOutput& output,
1700
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
325 const std::string& resourceId,
1146
200fcac0deb4 optimization for access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1145
diff changeset
326 FileContentType content)
226
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 224
diff changeset
327 {
232
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 227
diff changeset
328 FileInfo attachment;
1700
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
329 if (!index_.LookupAttachment(attachment, resourceId, content))
232
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 227
diff changeset
330 {
1700
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
331 throw OrthancException(ErrorCode_UnknownResource);
236
6d9be2b470b4 compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
332 }
226
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 224
diff changeset
333
1549
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
334 StorageAccessor accessor(area_);
1772
53e045b5a8ec MIME content type can be associated to custom attachments (cf. "UserContentType")
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1758
diff changeset
335 accessor.AnswerFile(output, attachment, GetFileContentMime(content));
226
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 224
diff changeset
336 }
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 224
diff changeset
337
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 224
diff changeset
338
1700
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
339 void ServerContext::ChangeAttachmentCompression(const std::string& resourceId,
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
340 FileContentType attachmentType,
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
341 CompressionType compression)
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
342 {
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
343 LOG(INFO) << "Changing compression type for attachment "
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
344 << EnumerationToString(attachmentType)
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
345 << " of resource " << resourceId << " to "
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
346 << compression;
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
347
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
348 FileInfo attachment;
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
349 if (!index_.LookupAttachment(attachment, resourceId, attachmentType))
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
350 {
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
351 throw OrthancException(ErrorCode_UnknownResource);
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
352 }
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
353
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
354 if (attachment.GetCompressionType() == compression)
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
355 {
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
356 // Nothing to do
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
357 return;
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
358 }
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
359
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
360 std::string content;
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
361
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
362 StorageAccessor accessor(area_);
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
363 accessor.Read(content, attachment);
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
364
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
365 FileInfo modified = accessor.Write(content.empty() ? NULL : content.c_str(),
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
366 content.size(), attachmentType, compression, storeMD5_);
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
367
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
368 try
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
369 {
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
370 StoreStatus status = index_.AddAttachment(modified, resourceId);
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
371 if (status != StoreStatus_Success)
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
372 {
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
373 accessor.Remove(modified);
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
374 throw OrthancException(ErrorCode_Database);
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
375 }
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
376 }
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
377 catch (OrthancException&)
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
378 {
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
379 accessor.Remove(modified);
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
380 throw;
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
381 }
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
382 }
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
383
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
384
2127
bfa92c9328d7 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2124
diff changeset
385 void ServerContext::ReadDicomAsJson(std::string& result,
bfa92c9328d7 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2124
diff changeset
386 const std::string& instancePublicId)
bfa92c9328d7 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2124
diff changeset
387 {
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
388 FileInfo attachment;
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
389 if (index_.LookupAttachment(attachment, instancePublicId, FileContentType_DicomAsJson))
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
390 {
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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parents: 2127
diff changeset
391 ReadAttachment(result, attachment);
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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parents: 2127
diff changeset
392 return;
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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parents: 2127
diff changeset
393 }
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
394
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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parents: 2127
diff changeset
395 // The "DICOM as JSON" summary is not available from the Orthanc
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
396 // store (most probably deleted), reconstruct it from the DICOM file
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
397 std::string dicom;
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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parents: 2127
diff changeset
398 ReadDicom(dicom, instancePublicId);
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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parents: 2127
diff changeset
399
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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parents: 2127
diff changeset
400 LOG(INFO) << "Reconstructing the missing DICOM-as-JSON summary for instance: " << instancePublicId;
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
401
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
402 ParsedDicomFile parsed(dicom);
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
403
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
404 Json::Value summary;
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
405 parsed.DatasetToJson(summary);
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
406
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
407 result = summary.toStyledString();
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
408
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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parents: 2127
diff changeset
409 if (!AddAttachment(instancePublicId, FileContentType_DicomAsJson, result.c_str(), result.size()))
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
410 {
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parents: 2127
diff changeset
411 LOG(WARNING) << "Cannot associate the DICOM-as-JSON summary to instance: " << instancePublicId;
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diff changeset
412 throw OrthancException(ErrorCode_InternalError);
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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parents: 2127
diff changeset
413 }
2127
bfa92c9328d7 cleaning up
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parents: 2124
diff changeset
414 }
bfa92c9328d7 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2124
diff changeset
415
bfa92c9328d7 cleaning up
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parents: 2124
diff changeset
416
2124
2b1520efa282 cleaning up
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parents: 2122
diff changeset
417 void ServerContext::ReadDicomAsJson(Json::Value& result,
2b1520efa282 cleaning up
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parents: 2122
diff changeset
418 const std::string& instancePublicId)
226
8a26a8e85edf refactoring to read files
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parents: 224
diff changeset
419 {
2127
bfa92c9328d7 cleaning up
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parents: 2124
diff changeset
420 std::string tmp;
bfa92c9328d7 cleaning up
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diff changeset
421 ReadDicomAsJson(tmp, instancePublicId);
226
8a26a8e85edf refactoring to read files
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parents: 224
diff changeset
422
8a26a8e85edf refactoring to read files
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parents: 224
diff changeset
423 Json::Reader reader;
2127
bfa92c9328d7 cleaning up
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diff changeset
424 if (!reader.parse(tmp, result))
226
8a26a8e85edf refactoring to read files
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parents: 224
diff changeset
425 {
1582
bd1889029cbb encoding of exceptions
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diff changeset
426 throw OrthancException(ErrorCode_CorruptedFile);
226
8a26a8e85edf refactoring to read files
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parents: 224
diff changeset
427 }
8a26a8e85edf refactoring to read files
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parents: 224
diff changeset
428 }
227
209ca3f6db62 dicom-scu from rest
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parents: 226
diff changeset
429
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
430
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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diff changeset
431 void ServerContext::ReadAttachment(std::string& result,
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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diff changeset
432 const std::string& instancePublicId,
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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diff changeset
433 FileContentType content,
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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diff changeset
434 bool uncompressIfNeeded)
227
209ca3f6db62 dicom-scu from rest
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parents: 226
diff changeset
435 {
232
5368bbe813cf refactoring of attachments
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diff changeset
436 FileInfo attachment;
5368bbe813cf refactoring of attachments
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parents: 227
diff changeset
437 if (!index_.LookupAttachment(attachment, instancePublicId, content))
227
209ca3f6db62 dicom-scu from rest
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parents: 226
diff changeset
438 {
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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diff changeset
439 LOG(WARNING) << "Unable to read attachment " << EnumerationToString(content) << " of instance " << instancePublicId;
227
209ca3f6db62 dicom-scu from rest
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diff changeset
440 throw OrthancException(ErrorCode_InternalError);
209ca3f6db62 dicom-scu from rest
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diff changeset
441 }
1550
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parents: 1549
diff changeset
442
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1549
diff changeset
443 if (uncompressIfNeeded)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1549
diff changeset
444 {
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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diff changeset
445 ReadAttachment(result, attachment);
1550
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parents: 1549
diff changeset
446 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1549
diff changeset
447 else
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1549
diff changeset
448 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1549
diff changeset
449 // Do not interpret the content of the storage area, return the
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1549
diff changeset
450 // raw data
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
451 area_.Read(result, attachment.GetUuid(), content);
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
452 }
227
209ca3f6db62 dicom-scu from rest
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parents: 226
diff changeset
453 }
285
4031f73fe0e4 access to the raw dicom tags
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parents: 269
diff changeset
454
4031f73fe0e4 access to the raw dicom tags
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parents: 269
diff changeset
455
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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parents: 2127
diff changeset
456 void ServerContext::ReadAttachment(std::string& result,
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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diff changeset
457 const FileInfo& attachment)
1778
776573e592da create media refactoring
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parents: 1772
diff changeset
458 {
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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parents: 2127
diff changeset
459 // This will decompress the attachment
1778
776573e592da create media refactoring
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parents: 1772
diff changeset
460 StorageAccessor accessor(area_);
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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parents: 2127
diff changeset
461 accessor.Read(result, attachment);
1778
776573e592da create media refactoring
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parents: 1772
diff changeset
462 }
776573e592da create media refactoring
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parents: 1772
diff changeset
463
776573e592da create media refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1772
diff changeset
464
285
4031f73fe0e4 access to the raw dicom tags
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diff changeset
465 IDynamicObject* ServerContext::DicomCacheProvider::Provide(const std::string& instancePublicId)
4031f73fe0e4 access to the raw dicom tags
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parents: 269
diff changeset
466 {
4031f73fe0e4 access to the raw dicom tags
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diff changeset
467 std::string content;
2124
2b1520efa282 cleaning up
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diff changeset
468 context_.ReadDicom(content, instancePublicId);
285
4031f73fe0e4 access to the raw dicom tags
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parents: 269
diff changeset
469 return new ParsedDicomFile(content);
4031f73fe0e4 access to the raw dicom tags
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parents: 269
diff changeset
470 }
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
471
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
472
778
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 774
diff changeset
473 ServerContext::DicomCacheLocker::DicomCacheLocker(ServerContext& that,
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 774
diff changeset
474 const std::string& instancePublicId) :
1129
8dabdc0d3007 fix possible deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1126
diff changeset
475 that_(that),
8dabdc0d3007 fix possible deadlock
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parents: 1126
diff changeset
476 lock_(that_.dicomCacheMutex_)
285
4031f73fe0e4 access to the raw dicom tags
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parents: 269
diff changeset
477 {
291
4d7469f72a0b embedding of dicom dictionaries
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parents: 288
diff changeset
478 #if ENABLE_DICOM_CACHE == 0
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 288
diff changeset
479 static std::auto_ptr<IDynamicObject> p;
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 288
diff changeset
480 p.reset(provider_.Provide(instancePublicId));
778
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 774
diff changeset
481 dicom_ = dynamic_cast<ParsedDicomFile*>(p.get());
291
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 288
diff changeset
482 #else
778
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 774
diff changeset
483 dicom_ = &dynamic_cast<ParsedDicomFile&>(that_.dicomCache_.Access(instancePublicId));
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 774
diff changeset
484 #endif
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 774
diff changeset
485 }
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 774
diff changeset
486
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 774
diff changeset
487
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 774
diff changeset
488 ServerContext::DicomCacheLocker::~DicomCacheLocker()
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 774
diff changeset
489 {
285
4031f73fe0e4 access to the raw dicom tags
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parents: 269
diff changeset
490 }
304
4eea080e6e7a refactoring
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parents: 291
diff changeset
491
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
492
695
c59bc408fb10 parameter to disable the computation of the MD5
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
493 void ServerContext::SetStoreMD5ForAttachments(bool storeMD5)
c59bc408fb10 parameter to disable the computation of the MD5
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
494 {
c59bc408fb10 parameter to disable the computation of the MD5
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
495 LOG(INFO) << "Storing MD5 for attachments: " << (storeMD5 ? "yes" : "no");
1549
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
496 storeMD5_ = storeMD5;
695
c59bc408fb10 parameter to disable the computation of the MD5
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
497 }
c59bc408fb10 parameter to disable the computation of the MD5
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
498
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
499
2929e17f8447 add attachments to resources
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parents: 697
diff changeset
500 bool ServerContext::AddAttachment(const std::string& resourceId,
2929e17f8447 add attachments to resources
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parents: 697
diff changeset
501 FileContentType attachmentType,
2929e17f8447 add attachments to resources
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parents: 697
diff changeset
502 const void* data,
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
503 size_t size)
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
504 {
2929e17f8447 add attachments to resources
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parents: 697
diff changeset
505 LOG(INFO) << "Adding attachment " << EnumerationToString(attachmentType) << " to resource " << resourceId;
2929e17f8447 add attachments to resources
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parents: 697
diff changeset
506
1549
e5e975e9b738 refactoring and simplification of StorageAccessor
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parents: 1548
diff changeset
507 // TODO Should we use "gzip" instead?
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
508 CompressionType compression = (compressionEnabled_ ? CompressionType_ZlibWithSize : CompressionType_None);
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
509
1549
e5e975e9b738 refactoring and simplification of StorageAccessor
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parents: 1548
diff changeset
510 StorageAccessor accessor(area_);
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
511 FileInfo attachment = accessor.Write(data, size, attachmentType, compression, storeMD5_);
699
2929e17f8447 add attachments to resources
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parents: 697
diff changeset
512
1549
e5e975e9b738 refactoring and simplification of StorageAccessor
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parents: 1548
diff changeset
513 StoreStatus status = index_.AddAttachment(attachment, resourceId);
699
2929e17f8447 add attachments to resources
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parents: 697
diff changeset
514 if (status != StoreStatus_Success)
2929e17f8447 add attachments to resources
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parents: 697
diff changeset
515 {
1549
e5e975e9b738 refactoring and simplification of StorageAccessor
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diff changeset
516 accessor.Remove(attachment);
699
2929e17f8447 add attachments to resources
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parents: 697
diff changeset
517 return false;
2929e17f8447 add attachments to resources
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parents: 697
diff changeset
518 }
2929e17f8447 add attachments to resources
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parents: 697
diff changeset
519 else
2929e17f8447 add attachments to resources
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parents: 697
diff changeset
520 {
2929e17f8447 add attachments to resources
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parents: 697
diff changeset
521 return true;
2929e17f8447 add attachments to resources
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parents: 697
diff changeset
522 }
2929e17f8447 add attachments to resources
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parents: 697
diff changeset
523 }
1145
0479d02c6778 Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
524
0479d02c6778 Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
525
0479d02c6778 Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
526 bool ServerContext::DeleteResource(Json::Value& target,
0479d02c6778 Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
527 const std::string& uuid,
0479d02c6778 Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
528 ResourceType expectedType)
0479d02c6778 Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
529 {
0479d02c6778 Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
530 return index_.DeleteResource(target, uuid, expectedType);
0479d02c6778 Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
531 }
1189
6b9b02a16e99 NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1165
diff changeset
532
6b9b02a16e99 NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1165
diff changeset
533
1198
1169528a9a5f refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1189
diff changeset
534 void ServerContext::SignalChange(const ServerIndexChange& change)
1189
6b9b02a16e99 NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1165
diff changeset
535 {
1436
0a3e3be59094 uncoupling of SignalChange for Lua scripts
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1434
diff changeset
536 pendingChanges_.Enqueue(change.Clone());
1189
6b9b02a16e99 NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1165
diff changeset
537 }
1232
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
538
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
539
2136
dd609a99d39a uniformization of the macro naming
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2135
diff changeset
540 #if ORTHANC_ENABLE_PLUGINS == 1
1434
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
541 void ServerContext::SetPlugins(OrthancPlugins& plugins)
1232
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
542 {
1459
040d58493998 security
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1456
diff changeset
543 boost::recursive_mutex::scoped_lock lock(listenersMutex_);
040d58493998 security
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1456
diff changeset
544
1434
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
545 plugins_ = &plugins;
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
546
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
547 // TODO REFACTOR THIS
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
548 listeners_.clear();
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
549 listeners_.push_back(ServerListener(lua_, "Lua"));
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
550 listeners_.push_back(ServerListener(plugins, "plugin"));
1232
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
551 }
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
552
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
553
1434
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
554 void ServerContext::ResetPlugins()
1232
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
555 {
1459
040d58493998 security
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1456
diff changeset
556 boost::recursive_mutex::scoped_lock lock(listenersMutex_);
040d58493998 security
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1456
diff changeset
557
1434
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
558 plugins_ = NULL;
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
559
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
560 // TODO REFACTOR THIS
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
561 listeners_.clear();
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
562 listeners_.push_back(ServerListener(lua_, "Lua"));
1232
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
563 }
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
564
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
565
1434
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
566 const OrthancPlugins& ServerContext::GetPlugins() const
1232
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
567 {
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
568 if (HasPlugins())
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
569 {
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
570 return *plugins_;
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
571 }
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
572 else
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
573 {
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
574 throw OrthancException(ErrorCode_InternalError);
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
575 }
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
576 }
1632
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
577
1741
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
578 OrthancPlugins& ServerContext::GetPlugins()
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
579 {
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
580 if (HasPlugins())
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
581 {
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
582 return *plugins_;
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
583 }
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
584 else
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
585 {
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
586 throw OrthancException(ErrorCode_InternalError);
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
587 }
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
588 }
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
589
1632
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
590 #endif
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
591
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
592
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
593 bool ServerContext::HasPlugins() const
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
594 {
2136
dd609a99d39a uniformization of the macro naming
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2135
diff changeset
595 #if ORTHANC_ENABLE_PLUGINS == 1
1632
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
596 return (plugins_ != NULL);
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
597 #else
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
598 return false;
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
599 #endif
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
600 }
1757
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
601
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
602
1758
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
603 bool ServerContext::Apply(std::list<std::string>& result,
1757
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
604 const ::Orthanc::LookupResource& lookup,
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
605 size_t maxResults)
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
606 {
1758
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
607 result.clear();
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
608
1757
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
609 std::vector<std::string> resources, instances;
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
610 GetIndex().FindCandidates(resources, instances, lookup);
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
611
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
612 assert(resources.size() == instances.size());
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
613
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
614 for (size_t i = 0; i < instances.size(); i++)
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
615 {
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
616 Json::Value dicom;
2124
2b1520efa282 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2122
diff changeset
617 ReadDicomAsJson(dicom, instances[i]);
1757
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
618
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
619 if (lookup.IsMatch(dicom))
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
620 {
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
621 if (maxResults != 0 &&
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
622 result.size() >= maxResults)
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
623 {
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
624 return false; // too many results
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
625 }
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
626 else
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
627 {
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
628 result.push_back(resources[i]);
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
629 }
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
630 }
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
631 }
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
632
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
633 return true; // finished
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
634 }
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
635
224
4eb0c7ce86c9 refactoring for store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
636 }