Mercurial > hg > orthanc

annotate OrthancServer/Sources/Database/Upgrade4To5.sql @ 4831:7053502fbf97

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
added copyright UCLouvain
author Sebastien Jodogne <s.jodogne@gmail.com>
date Thu, 25 Nov 2021 19:01:11 +0100
parents d9473bd5ed43
children 2e71a08eea15 43e613a7756b
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
4124
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
1 -- Orthanc - A Lightweight, RESTful DICOM Store
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
2 -- Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
3 -- Department, University Hospital of Liege, Belgium
4437
d9473bd5ed43 upgrade to year 2021
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4124
diff changeset
4 -- Copyright (C) 2017-2021 Osimis S.A., Belgium
4831
7053502fbf97 added copyright UCLouvain
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
5 -- Copyright (C) 2021-2021 Sebastien Jodogne, ICTEAM UCLouvain, Belgium
4124
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
6 --
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
7 -- This program is free software: you can redistribute it and/or
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
8 -- modify it under the terms of the GNU General Public License as
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
9 -- published by the Free Software Foundation, either version 3 of the
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
10 -- License, or (at your option) any later version.
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
11 --
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
12 -- In addition, as a special exception, the copyright holders of this
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
13 -- program give permission to link the code of its release with the
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
14 -- OpenSSL project's "OpenSSL" library (or with modified versions of it
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
15 -- that use the same license as the "OpenSSL" library), and distribute
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
16 -- the linked executables. You must obey the GNU General Public License
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
17 -- in all respects for all of the code used other than "OpenSSL". If you
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
18 -- modify file(s) with this exception, you may extend this exception to
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
19 -- your version of the file(s), but you are not obligated to do so. If
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
20 -- you do not wish to do so, delete this exception statement from your
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
21 -- version. If you delete this exception statement from all source files
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
22 -- in the program, then also delete it here.
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
23 --
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
24 -- This program is distributed in the hope that it will be useful, but
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
25 -- WITHOUT ANY WARRANTY; without even the implied warranty of
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
26 -- MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
27 -- General Public License for more details.
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
28 --
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
29 -- You should have received a copy of the GNU General Public License
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
30 -- along with this program. If not, see <http://www.gnu.org/licenses/>.
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
31
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
32
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
33 --
1158
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
34 -- This SQLite script updates the version of the Orthanc database from 4 to 5.
4124
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
35 --
1158
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
36
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
37
1159
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
38 -- Remove 2 indexes to speed up
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
39
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
40 DROP INDEX MainDicomTagsIndex2;
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
41 DROP INDEX MainDicomTagsIndexValues;
1158
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
42
1159
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
43
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
44 -- Add a new table to index the DICOM identifiers
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
45
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
46 CREATE TABLE DicomIdentifiers(
1158
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
47 id INTEGER REFERENCES Resources(internalId) ON DELETE CASCADE,
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
48 tagGroup INTEGER,
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
49 tagElement INTEGER,
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
50 value TEXT,
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
51 PRIMARY KEY(id, tagGroup, tagElement)
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
52 );
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
53
1159
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
54 CREATE INDEX DicomIdentifiersIndex1 ON DicomIdentifiers(id);
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
55 CREATE INDEX DicomIdentifiersIndex2 ON DicomIdentifiers(tagGroup, tagElement);
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
56 CREATE INDEX DicomIdentifiersIndexValues ON DicomIdentifiers(value COLLATE BINARY);
1158
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
57
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
58
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
59 -- Migrate data from MainDicomTags to MainResourcesTags and MainInstancesTags
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
60
1159
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
61 INSERT INTO DicomIdentifiers SELECT * FROM MainDicomTags
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
62 WHERE ((tagGroup = 16 AND tagElement = 32) OR -- PatientID (0x0010, 0x0020)
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
63 (tagGroup = 32 AND tagElement = 13) OR -- StudyInstanceUID (0x0020, 0x000d)
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
64 (tagGroup = 8 AND tagElement = 80) OR -- AccessionNumber (0x0008, 0x0050)
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
65 (tagGroup = 32 AND tagElement = 14) OR -- SeriesInstanceUID (0x0020, 0x000e)
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
66 (tagGroup = 8 AND tagElement = 24)); -- SOPInstanceUID (0x0008, 0x0018)
1158
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
67
1159
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
68 DELETE FROM MainDicomTags
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
69 WHERE ((tagGroup = 16 AND tagElement = 32) OR -- PatientID (0x0010, 0x0020)
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
70 (tagGroup = 32 AND tagElement = 13) OR -- StudyInstanceUID (0x0020, 0x000d)
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
71 (tagGroup = 8 AND tagElement = 80) OR -- AccessionNumber (0x0008, 0x0050)
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
72 (tagGroup = 32 AND tagElement = 14) OR -- SeriesInstanceUID (0x0020, 0x000e)
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
73 (tagGroup = 8 AND tagElement = 24)); -- SOPInstanceUID (0x0008, 0x0018)
1158
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
74
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
75
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
76 -- Upgrade the "ResourceDeleted" trigger
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
77
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
78 DROP TRIGGER ResourceDeleted;
1176
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1159
diff changeset
79 DROP TRIGGER ResourceDeletedParentCleaning;
1158
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
80
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
81 CREATE TRIGGER ResourceDeleted
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
82 AFTER DELETE ON Resources
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
83 BEGIN
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
84 SELECT SignalResourceDeleted(old.publicId, old.resourceType);
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
85 SELECT SignalRemainingAncestor(parent.publicId, parent.resourceType)
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
86 FROM Resources AS parent WHERE internalId = old.parentId;
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
87 END;
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
88
1176
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1159
diff changeset
89 CREATE TRIGGER ResourceDeletedParentCleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1159
diff changeset
90 AFTER DELETE ON Resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1159
diff changeset
91 FOR EACH ROW WHEN (SELECT COUNT(*) FROM Resources WHERE parentId = old.parentId) = 0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1159
diff changeset
92 BEGIN
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1159
diff changeset
93 DELETE FROM Resources WHERE internalId = old.parentId;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1159
diff changeset
94 END;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1159
diff changeset
95
1158
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
96
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
97 -- Change the database version
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
98 -- The "1" corresponds to the "GlobalProperty_DatabaseSchemaVersion" enumeration
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
99
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
100 UPDATE GlobalProperties SET value="5" WHERE property=1;