Mercurial > hg > orthanc
annotate OrthancServer/Sources/Search/DatabaseLookup.cpp @ 5176:6d8647122ef3
cont
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Fri, 24 Mar 2023 19:10:00 +0100 |
parents | 6f41d47ef994 |
children | 0ea402b4d901 |
rev | line source |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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upgrade to year 2022
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5 * Copyright (C) 2017-2022 Osimis S.A., Belgium |
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6 * Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
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7 * |
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8 * This program is free software: you can redistribute it and/or |
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9 * modify it under the terms of the GNU General Public License as |
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10 * published by the Free Software Foundation, either version 3 of the |
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11 * License, or (at your option) any later version. |
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12 * |
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13 * This program is distributed in the hope that it will be useful, but |
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14 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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16 * General Public License for more details. |
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17 * |
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18 * You should have received a copy of the GNU General Public License |
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19 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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20 **/ |
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21 |
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22 |
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23 #include "../PrecompiledHeadersServer.h" |
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24 #include "DatabaseLookup.h" |
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25 |
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26 #include "../ServerToolbox.h" |
4045 | 27 #include "../../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" |
28 #include "../../../OrthancFramework/Sources/DicomParsing/ToDcmtkBridge.h" | |
29 #include "../../../OrthancFramework/Sources/OrthancException.h" | |
30 #include "../../../OrthancFramework/Sources/Toolbox.h" | |
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31 |
4304 | 32 #include <boost/lexical_cast.hpp> |
33 | |
34 | |
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35 namespace Orthanc |
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36 { |
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37 DatabaseLookup::~DatabaseLookup() |
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38 { |
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39 for (size_t i = 0; i < constraints_.size(); i++) |
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40 { |
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41 assert(constraints_[i] != NULL); |
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42 delete constraints_[i]; |
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43 } |
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44 } |
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45 |
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46 |
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47 const DicomTagConstraint& DatabaseLookup::GetConstraint(size_t index) const |
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48 { |
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49 if (index >= constraints_.size()) |
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50 { |
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51 throw OrthancException(ErrorCode_ParameterOutOfRange); |
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52 } |
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53 else |
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54 { |
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55 assert(constraints_[index] != NULL); |
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56 return *constraints_[index]; |
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57 } |
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58 } |
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59 |
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60 |
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61 void DatabaseLookup::AddConstraintInternal(DicomTagConstraint* constraint) |
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62 { |
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63 if (constraint == NULL) |
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64 { |
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65 throw OrthancException(ErrorCode_NullPointer); |
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66 } |
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67 else |
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68 { |
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69 constraints_.push_back(constraint); |
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70 } |
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71 } |
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72 |
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73 |
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74 bool DatabaseLookup::IsMatch(const DicomMap& value) const |
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75 { |
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76 for (size_t i = 0; i < constraints_.size(); i++) |
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77 { |
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78 assert(constraints_[i] != NULL); |
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79 if (!constraints_[i]->IsMatch(value)) |
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80 { |
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81 return false; |
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82 } |
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83 } |
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84 |
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85 return true; |
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86 } |
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87 |
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88 |
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89 bool DatabaseLookup::IsMatch(DcmItem& item, |
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90 Encoding encoding, |
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91 bool hasCodeExtensions) const |
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92 { |
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93 for (size_t i = 0; i < constraints_.size(); i++) |
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94 { |
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95 assert(constraints_[i] != NULL); |
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96 |
3072 | 97 const bool isOptionalConstraint = !constraints_[i]->IsMandatory(); |
98 const DcmTagKey tag = ToDcmtkBridge::Convert(constraints_[i]->GetTag()); | |
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99 |
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100 DcmElement* element = NULL; |
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101 if (!item.findAndGetElement(tag, element).good()) |
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102 { |
3072 | 103 return isOptionalConstraint; |
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104 } |
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105 |
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106 if (element == NULL) |
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107 { |
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108 return false; |
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109 } |
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110 |
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111 std::set<DicomTag> ignoreTagLength; |
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112 std::unique_ptr<DicomValue> value(FromDcmtkBridge::ConvertLeafElement |
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113 (*element, DicomToJsonFlags_None, |
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114 0, encoding, hasCodeExtensions, ignoreTagLength)); |
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115 |
3072 | 116 // WARNING: Also modify "HierarchicalMatcher::Setup()" if modifying this code |
117 if (value.get() == NULL || | |
118 value->IsNull()) | |
119 { | |
120 return isOptionalConstraint; | |
121 } | |
122 else if (value->IsBinary() || | |
123 !constraints_[i]->IsMatch(value->GetContent())) | |
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124 { |
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125 return false; |
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126 } |
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127 } |
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128 |
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129 return true; |
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130 } |
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131 |
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132 |
3027 | 133 void DatabaseLookup::AddDicomConstraintInternal(const DicomTag& tag, |
134 ValueRepresentation vr, | |
135 const std::string& dicomQuery, | |
136 bool caseSensitive, | |
137 bool mandatoryTag) | |
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138 { |
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139 if ((vr == ValueRepresentation_Date || |
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140 vr == ValueRepresentation_DateTime || |
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141 vr == ValueRepresentation_Time) && |
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142 dicomQuery.find('-') != std::string::npos) |
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143 { |
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144 /** |
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145 * Range matching is only defined for TM, DA and DT value |
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146 * representations. This code fixes issues 35 and 37. |
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147 * |
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148 * Reference: "Range matching is not defined for types of |
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149 * Attributes other than dates and times", DICOM PS 3.4, |
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150 * C.2.2.2.5 ("Range Matching"). |
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151 **/ |
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152 size_t separator = dicomQuery.find('-'); |
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153 std::string lower = dicomQuery.substr(0, separator); |
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154 std::string upper = dicomQuery.substr(separator + 1); |
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155 |
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156 if (!lower.empty()) |
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157 { |
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158 AddConstraintInternal(new DicomTagConstraint |
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159 (tag, ConstraintType_GreaterOrEqual, lower, caseSensitive, mandatoryTag)); |
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160 } |
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161 |
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162 if (!upper.empty()) |
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163 { |
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164 AddConstraintInternal(new DicomTagConstraint |
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165 (tag, ConstraintType_SmallerOrEqual, upper, caseSensitive, mandatoryTag)); |
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166 } |
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167 } |
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168 else if (dicomQuery.find('\\') != std::string::npos) |
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169 { |
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170 DicomTag fixedTag(tag); |
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171 |
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172 std::unique_ptr<DicomTagConstraint> constraint |
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173 (new DicomTagConstraint(fixedTag, ConstraintType_List, caseSensitive, mandatoryTag)); |
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174 |
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175 std::vector<std::string> items; |
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176 Toolbox::TokenizeString(items, dicomQuery, '\\'); |
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177 |
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178 for (size_t i = 0; i < items.size(); i++) |
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179 { |
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180 constraint->AddValue(items[i]); |
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181 } |
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182 |
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183 AddConstraintInternal(constraint.release()); |
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184 } |
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185 else if ( |
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186 /** |
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187 * New test in Orthanc 1.6.0: Wild card matching is only allowed |
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188 * for a subset of value representations: AE, CS, LO, LT, PN, |
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189 * SH, ST, UC, UR, UT. |
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190 * http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.4.html |
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191 **/ |
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192 (vr == ValueRepresentation_ApplicationEntity || // AE |
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193 vr == ValueRepresentation_CodeString || // CS |
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194 vr == ValueRepresentation_LongString || // LO |
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195 vr == ValueRepresentation_LongText || // LT |
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196 vr == ValueRepresentation_PersonName || // PN |
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197 vr == ValueRepresentation_ShortString || // SH |
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198 vr == ValueRepresentation_ShortText || // ST |
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199 vr == ValueRepresentation_UnlimitedCharacters || // UC |
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200 vr == ValueRepresentation_UniversalResource || // UR |
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201 vr == ValueRepresentation_UnlimitedText // UT |
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202 ) && |
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203 (dicomQuery.find('*') != std::string::npos || |
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204 dicomQuery.find('?') != std::string::npos)) |
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205 { |
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206 AddConstraintInternal(new DicomTagConstraint |
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207 (tag, ConstraintType_Wildcard, dicomQuery, caseSensitive, mandatoryTag)); |
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208 } |
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209 else |
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210 { |
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211 AddConstraintInternal(new DicomTagConstraint |
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212 (tag, ConstraintType_Equal, dicomQuery, caseSensitive, mandatoryTag)); |
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213 } |
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214 } |
3027 | 215 |
216 | |
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217 void DatabaseLookup::AddDicomConstraint(const DicomTag& tag, |
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218 const std::string& dicomQuery, |
3027 | 219 bool caseSensitivePN, |
220 bool mandatoryTag) | |
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221 { |
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222 ValueRepresentation vr = FromDcmtkBridge::LookupValueRepresentation(tag); |
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223 |
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224 if (vr == ValueRepresentation_Sequence) |
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225 { |
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226 throw OrthancException(ErrorCode_ParameterOutOfRange); |
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227 } |
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228 |
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229 /** |
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230 * DICOM specifies that searches must always be case sensitive, |
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231 * except for tags with a PN value representation. For PN, Orthanc |
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232 * uses the configuration option "CaseSensitivePN" to decide |
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233 * whether matching is case-sensitive or case-insensitive. |
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234 * |
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235 * Reference: DICOM PS 3.4 |
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236 * - C.2.2.2.1 ("Single Value Matching") |
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237 * - C.2.2.2.4 ("Wild Card Matching") |
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238 * http://medical.nema.org/Dicom/2011/11_04pu.pdf |
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239 * |
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240 * "Except for Attributes with a PN Value Representation, only |
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241 * entities with values which match exactly the value specified in the |
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242 * request shall match. This matching is case-sensitive, i.e., |
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243 * sensitive to the exact encoding of the key attribute value in |
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244 * character sets where a letter may have multiple encodings (e.g., |
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245 * based on its case, its position in a word, or whether it is |
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246 * accented) |
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247 * |
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248 * For Attributes with a PN Value Representation (e.g., Patient Name |
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249 * (0010,0010)), an application may perform literal matching that is |
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250 * either case-sensitive, or that is insensitive to some or all |
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251 * aspects of case, position, accent, or other character encoding |
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252 * variants." |
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253 * |
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254 * (0008,0018) UI SOPInstanceUID => Case-sensitive |
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255 * (0008,0050) SH AccessionNumber => Case-sensitive |
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256 * (0010,0020) LO PatientID => Case-sensitive |
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257 * (0020,000D) UI StudyInstanceUID => Case-sensitive |
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258 * (0020,000E) UI SeriesInstanceUID => Case-sensitive |
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259 **/ |
3027 | 260 |
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261 if (vr == ValueRepresentation_PersonName) |
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262 { |
3027 | 263 AddDicomConstraintInternal(tag, vr, dicomQuery, caseSensitivePN, mandatoryTag); |
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264 } |
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265 else |
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266 { |
3027 | 267 AddDicomConstraintInternal(tag, vr, dicomQuery, true /* case sensitive */, mandatoryTag); |
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268 } |
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269 } |
3027 | 270 |
271 | |
272 void DatabaseLookup::AddRestConstraint(const DicomTag& tag, | |
273 const std::string& dicomQuery, | |
274 bool caseSensitive, | |
275 bool mandatoryTag) | |
276 { | |
277 AddDicomConstraintInternal(tag, FromDcmtkBridge::LookupValueRepresentation(tag), | |
278 dicomQuery, caseSensitive, mandatoryTag); | |
279 } | |
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280 |
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281 |
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282 bool DatabaseLookup::HasOnlyMainDicomTags() const |
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283 { |
5176 | 284 std::set<DicomTag> allMainTags; |
285 DicomMap::GetAllMainDicomTags(allMainTags); | |
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286 |
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287 for (size_t i = 0; i < constraints_.size(); i++) |
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288 { |
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289 assert(constraints_[i] != NULL); |
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290 |
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291 if (allMainTags.find(constraints_[i]->GetTag()) == allMainTags.end()) |
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292 { |
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293 // This is not a main DICOM tag |
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294 return false; |
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295 } |
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296 } |
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297 |
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298 return true; |
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299 } |
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300 |
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301 |
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302 std::string DatabaseLookup::Format() const |
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303 { |
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304 std::string s; |
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305 |
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306 for (size_t i = 0; i < constraints_.size(); i++) |
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307 { |
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308 assert(constraints_[i] != NULL); |
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309 s += ("Contraint " + boost::lexical_cast<std::string>(i) + ": " + |
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310 constraints_[i]->Format() + "\n"); |
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311 } |
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312 |
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313 return s; |
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314 } |
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315 |
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316 |
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317 bool DatabaseLookup::HasTag(const DicomTag& tag) const |
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318 { |
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319 for (size_t i = 0; i < constraints_.size(); i++) |
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320 { |
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321 assert(constraints_[i] != NULL); |
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322 if (constraints_[i]->GetTag() == tag) |
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323 { |
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324 return true; |
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325 } |
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326 } |
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327 |
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328 return false; |
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329 } |
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330 |
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331 bool DatabaseLookup::GetConstraint(const DicomTagConstraint*& constraint, const DicomTag& tag) const |
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332 { |
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333 for (size_t i = 0; i < constraints_.size(); i++) |
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334 { |
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335 assert(constraints_[i] != NULL); |
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336 if (constraints_[i]->GetTag() == tag) |
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337 { |
4981 | 338 constraint = constraints_[i]; |
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339 return true; |
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340 } |
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341 } |
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342 |
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343 return false; |
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344 } |
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345 |
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346 |
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347 void DatabaseLookup::RemoveConstraint(const DicomTag& tag) |
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348 { |
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349 for (size_t i = 0; i < constraints_.size(); i++) |
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350 { |
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351 assert(constraints_[i] != NULL); |
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352 if (constraints_[i]->GetTag() == tag) |
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353 { |
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354 delete constraints_[i]; |
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355 constraints_.erase(constraints_.begin() + i); |
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356 } |
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357 } |
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358 } |
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359 |
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360 DatabaseLookup* DatabaseLookup::Clone() const |
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361 { |
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362 std::unique_ptr<DatabaseLookup> clone(new DatabaseLookup()); |
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363 |
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364 for (size_t i = 0; i < constraints_.size(); i++) |
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365 { |
4995 | 366 clone->AddConstraintInternal(new DicomTagConstraint(*constraints_[i])); |
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367 } |
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368 |
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369 return clone.release(); |
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370 } |
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371 } |